Cp4.1LG20g01510 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAGTAAGTCGAAATGGAAGAGGGAAACCCCAATTATATTTAGCGAAGCGGGCCGCGGAATCTCAATCTTCTTGAACCTGAGCTTCCTGTAAATCTAAAGCTCAAAACCTTTGTTGCTTGTTGTTGCTTGTTGTTGTGACAATGGCGATCAACAACAATAGCGGGGATATCCTGATGCTCGAGGCTCCACCGCAGCCATCTCAACCAGCGTGGCGCGTTTCTGCAGATGCGGAGGTAATCGACGCCTTGCCCTACATCGACGATGACTATGCGGACCCAAGGGTCAAAGCAGAGGTCGATCGATTAGTGGAGGAAGAGATGCGGCGCAGCTCCAAGCGACCTGCTGACTTTCTCAAAGACTTGCCTCCTCTTCCCAAGTTCAAATTTGAGGTAGGTTAGACTGCAATTTCATTTCCCGCCGGAGCTTCTTCTAGGTTACGCACTTGTAGTTCCGCTTGATTTTATAGGTTATCATGCCTGAAAGAACGAATTACTTGTTCTCACTGGTTTTATTTGATAGACAGTTACTAATGCCGAAACTGGAAGTGTTTAGAAGCTTCATCTGCTAGTTTTCTTCCAAAACATCCTCTATTTGTTTTCTCGAAAACGAGATGAAAAAATTCGAATCAAAATTAATCGTTCGACAAGAACATAGGATATGGGCACACTGCTTATCCTCAAGTCACAGTGTGTCATCCAATGAATATATGACGCGCTACTCTACATAAGTTATTTTGCCACTACATTGGATAGATCTTGAAATTATTACGAAGTGTGATAATATTAGCAATAGTCTATTCAACTGACGTAGTTTGAACTCAGGATCATCCAATGCTTGCGAGAGAGTATGAACGTGTAAGAGCTGGGAGGCCTCCAATGCCTCTCGATGTTGCTAGATATAAATTAGAGACACCGCCTCCAAATAAAAAGAATGACGAAACTGCTTGGAAGCAGACACTTCAGAGAGCTCAATGCCTACTCCAGCATCAAGTGCTGAGGTGAAGTTTAGCATGTTAAAGTTGTTCCTGGCATTTAAGCTTTGTATTTTTGGAAAACTTGATTTTATGGAGAACAGTTAGAGTTGGCTACTTGAACTCATACAGTTCTTCTAATATCTGCCACACATAGTTAACATTTCTATGCCTTTTCTTGGTTGCAGTTGGTTTCTCATATCTAGTTTGTGTACCAATGAGCCATGACTGTGAGAGGTGTAATTTATAAAATTTTGATAAGAAAAGACATAATTCAGAAGATTATACGCCCAAACATGAAATTAAACATTAGAGAGGTTTTGATGATTCATTAGGAAATAATAAGAATATGGTAATCTGACGACTGGTGATGCTGTTGTCTCATACTGCAGGCTGGAAAATTTGGAACTGATGTCAAAATATGGCCCTGATATCTGGAAGCAACACAACAAACAGTTGGAAGCACTTCTATCAAGGTTTGTTACCATATTTCGTTTTGATGTCTTATATTATGTGTGTACTAGTTTTGTATTTATGTTGTCAAATATGATTCCAAGTCAAATCATTTGGCTTATCTCGTTCTATAGTGTAAATATGATTTCTGAATAAAGTGAACATGAAAGTATTAAGTACATCTGTGATCTGACCAAAGTAGACGTATATAATTGTTAATATATTGTCATGATGTTATCAGAATGCAAAAATTAGCTCAAGAACAGAATGAGAAGATTGAAAAAGTGAACCGTGAAAGGAAATTCCATCAAGTAAGTAGCATCCCTGTAATTCATATTTCAATGGGGCAGAGGTCAATTCTTTGGAACCTTTGGTTGATTATTTATGCGATGATCAGCAAAACGCTGCATATGAGCTTCATGCTTTGTCCACACAATGGAAGGAGCTGTGCGAGAAAAATATGGAAATCCAAGTGGCATGCTCTCAAATAGAGGGTCAAATCCAGGAACTAAGGAGTGAGGCGGCAGAAAAGTAATCTTGCCTTCTTCTATTTAATCTATTTTTGTCCTACATATGTTTGGCATGTTTAGAACTGATCTGTGGGTTATGATTCCAGAGGCTGGAATTTGGAAGTCAATGTAGAGAATGGATCTGTTTCGTTTCCAATGTCATAAGGTATGCTTTAGATGCCATCTCTTGTTTTTAATATCTGACATTTAACCCAAAGTTCACTTCCATTTCTCCTCTTATATTAGAATTTCTAACTTAACACTACTTGTACCATGTTTGCCTTTTTACTGTTTATTTCTTTTCAATATCTCGTGTTAAAATGATATGTCATTAGTTATCTGTCTAAAAATATCATGTGTTACTGTTTTCTGATTACCATCTGCGTTTATCCGTCTTCGAGTCAATTTTGATTTTTAGCAATCTCATGGCACAAACCGGAATGAATTCTCTTCTGCCATTAATGTGCTTATGTCTTTCCTCTCCCAACATATGAGAAAATACAATAATTCAATCTAAATTTCTCAAGTTGGCAAGGAGATGGCTCAGTTTAGTGGTGGCAGAAAATCTAACCCTTTAAAAAGAGTAGAGTTCGTTTTTCTTTCATTTTCTTCTTCTGACCTGGGAGATGAAAGAAAATAAAAGAGACCAAGTGAAAGAAGGAACAAAGATAAAGGGGTAAACCAATGTGATCATGACATTGTAGGTGCTTACGATGGAAAGGAATCGGTTGGTTTGGGTTGCGAAGTCCCTTCTTTTTTTATGGGTCATCTCGTGCTTTTACCTTTTACTGGGTCATTAATACATCCATTGGAGTCGATTCTTTCTTCCACAAAATGTATCCCACAGATTATGACATGATTTTTTTGACATCTCAGTGGAATAGGGGACCGTCCTAACCATGGCTTTGCTGCTCAGAAGTAAAGACTGCCAACGTCTTCTGTTGCTGTTACCATATGCCTACATGGAAGATGAGTTAGTTTTCTGCTTATATGGGTCAGGCTGGTTGGTTGCCTTTCTTGACCTCCAAGGTCCGCCTTTAGTCTTTTTCAAAATTTACATTGATTTTACTGTATCTGTACCTTTAGTGAAGTAATTCGAAATACCTTTTAGCCATTTTCTGCTTGCTAACCACGTTATTGGATCACTCTCCTTATTTACATTTAATATATATTATGTATGTCATTGAACTACCAAACTGTCAATCAAATGGATAATATTTGATATTAATTCAAATCCAAATTCTTTCAAAATAAACCATGGTAGGAGAGACTAGAGAGATTTATTTGATTTATTCTATAGGCTTTTTTTATATAAGAACATGTTACCCTTCATGTCAATATACTTCAATTGTTACTCCAATTTGTATGTTGATGTTATTATTTATAAATCATGTTTTTATTCCTTTTAATTTTTAGATATC TGAGTAAGTCGAAATGGAAGAGGGAAACCCCAATTATATTTAGCGAAGCGGGCCGCGGAATCTCAATCTTCTTGAACCTGAGCTTCCTGTAAATCTAAAGCTCAAAACCTTTGTTGCTTGTTGTTGCTTGTTGTTGTGACAATGGCGATCAACAACAATAGCGGGGATATCCTGATGCTCGAGGCTCCACCGCAGCCATCTCAACCAGCGTGGCGCGTTTCTGCAGATGCGGAGGTAATCGACGCCTTGCCCTACATCGACGATGACTATGCGGACCCAAGGGTCAAAGCAGAGGTCGATCGATTAGTGGAGGAAGAGATGCGGCGCAGCTCCAAGCGACCTGCTGACTTTCTCAAAGACTTGCCTCCTCTTCCCAAGTTCAAATTTGAGGATCATCCAATGCTTGCGAGAGAGTATGAACGTGTAAGAGCTGGGAGGCCTCCAATGCCTCTCGATGTTGCTAGATATAAATTAGAGACACCGCCTCCAAATAAAAAGAATGACGAAACTGCTTGGAAGCAGACACTTCAGAGAGCTCAATGCCTACTCCAGCATCAAGTGCTGAGGCTGGAAAATTTGGAACTGATGTCAAAATATGGCCCTGATATCTGGAAGCAACACAACAAACAGTTGGAAGCACTTCTATCAAGAATGCAAAAATTAGCTCAAGAACAGAATGAGAAGATTGAAAAAGTGAACCGTGAAAGGAAATTCCATCAAAGGCTGGAATTTGGAAGTCAATGTAGAGAATGGATCTGTTTCGTTTCCAATGTCATAAGTGGAATAGGGGACCGTCCTAACCATGGCTTTGCTGCTCAGAAGTAAAGACTGCCAACGTCTTCTGTTGCTGTTACCATATGCCTACATGGAAGATGAGTTAGTTTTCTGCTTATATGGGTCAGGCTGGTTGGTTGCCTTTCTTGACCTCCAAGGTCCGCCTTTAGTCTTTTTCAAAATTTACATTGATTTTACTGTATCTGTACCTTTAGTGAAGTAATTCGAAATACCTTTTAGCCATTTTCTGCTTGCTAACCACGTTATTGGATCACTCTCCTTATTTACATTTAATATATATTATGTATGTCATTGAACTACCAAACTGTCAATCAAATGGATAATATTTGATATTAATTCAAATCCAAATTCTTTCAAAATAAACCATGGTAGGAGAGACTAGAGAGATTTATTTGATTTATTCTATAGGCTTTTTTTATATAAGAACATGTTACCCTTCATGTCAATATACTTCAATTGTTACTCCAATTTGTATGTTGATGTTATTATTTATAAATCATGTTTTTATTCCTTTTAATTTTTAGATATC ATGGCGATCAACAACAATAGCGGGGATATCCTGATGCTCGAGGCTCCACCGCAGCCATCTCAACCAGCGTGGCGCGTTTCTGCAGATGCGGAGGTAATCGACGCCTTGCCCTACATCGACGATGACTATGCGGACCCAAGGGTCAAAGCAGAGGTCGATCGATTAGTGGAGGAAGAGATGCGGCGCAGCTCCAAGCGACCTGCTGACTTTCTCAAAGACTTGCCTCCTCTTCCCAAGTTCAAATTTGAGGATCATCCAATGCTTGCGAGAGAGTATGAACGTGTAAGAGCTGGGAGGCCTCCAATGCCTCTCGATGTTGCTAGATATAAATTAGAGACACCGCCTCCAAATAAAAAGAATGACGAAACTGCTTGGAAGCAGACACTTCAGAGAGCTCAATGCCTACTCCAGCATCAAGTGCTGAGGCTGGAAAATTTGGAACTGATGTCAAAATATGGCCCTGATATCTGGAAGCAACACAACAAACAGTTGGAAGCACTTCTATCAAGAATGCAAAAATTAGCTCAAGAACAGAATGAGAAGATTGAAAAAGTGAACCGTGAAAGGAAATTCCATCAAAGGCTGGAATTTGGAAGTCAATGTAGAGAATGGATCTGTTTCGTTTCCAATGTCATAAGTGGAATAGGGGACCGTCCTAACCATGGCTTTGCTGCTCAGAAGTAA MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKNDETAWKQTLQRAQCLLQHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQRLEFGSQCREWICFVSNVISGIGDRPNHGFAAQK
BLAST of Cp4.1LG20g01510 vs. Swiss-Prot
Match: SPF27_ARATH (Pre-mRNA-splicing factor SPF27 homolog OS=Arabidopsis thaliana GN=MOS4 PE=1 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 2.2e-69 Identity = 132/203 (65.02%), Postives = 169/203 (83.25%), Query Frame = 1
BLAST of Cp4.1LG20g01510 vs. Swiss-Prot
Match: SPF27_HUMAN (Pre-mRNA-splicing factor SPF27 OS=Homo sapiens GN=BCAS2 PE=1 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 9.0e-23 Identity = 67/182 (36.81%), Postives = 102/182 (56.04%), Query Frame = 1
BLAST of Cp4.1LG20g01510 vs. Swiss-Prot
Match: SPF27_MOUSE (Pre-mRNA-splicing factor SPF27 OS=Mus musculus GN=Bcas2 PE=1 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 9.0e-23 Identity = 67/182 (36.81%), Postives = 102/182 (56.04%), Query Frame = 1
BLAST of Cp4.1LG20g01510 vs. Swiss-Prot
Match: SPF27_PONAB (Pre-mRNA-splicing factor SPF27 OS=Pongo abelii GN=BCAS2 PE=2 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 9.0e-23 Identity = 69/183 (37.70%), Postives = 103/183 (56.28%), Query Frame = 1
BLAST of Cp4.1LG20g01510 vs. Swiss-Prot
Match: SPF27_DANRE (Pre-mRNA-splicing factor SPF27 OS=Danio rerio GN=bcas2 PE=2 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.5e-22 Identity = 66/181 (36.46%), Postives = 98/181 (54.14%), Query Frame = 1
BLAST of Cp4.1LG20g01510 vs. TrEMBL
Match: A0A0A0LQG2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042680 PE=4 SV=1) HSP 1 Score: 378.3 bits (970), Expect = 6.8e-102 Identity = 187/194 (96.39%), Postives = 193/194 (99.48%), Query Frame = 1
BLAST of Cp4.1LG20g01510 vs. TrEMBL
Match: A0A067KSC7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05347 PE=4 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 1.9e-75 Identity = 144/195 (73.85%), Postives = 169/195 (86.67%), Query Frame = 1
BLAST of Cp4.1LG20g01510 vs. TrEMBL
Match: W9RFJ2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017406 PE=4 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 7.1e-75 Identity = 144/195 (73.85%), Postives = 166/195 (85.13%), Query Frame = 1
BLAST of Cp4.1LG20g01510 vs. TrEMBL
Match: A0A0K9RPK4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_048690 PE=4 SV=1) HSP 1 Score: 283.5 bits (724), Expect = 2.3e-73 Identity = 138/194 (71.13%), Postives = 166/194 (85.57%), Query Frame = 1
BLAST of Cp4.1LG20g01510 vs. TrEMBL
Match: A0A151TKA6_CAJCA (Pre-mRNA-splicing factor SPF27 OS=Cajanus cajan GN=KK1_023817 PE=4 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 3.0e-73 Identity = 140/191 (73.30%), Postives = 166/191 (86.91%), Query Frame = 1
BLAST of Cp4.1LG20g01510 vs. TAIR10
Match: AT3G18165.1 (AT3G18165.1 modifier of snc1,4) HSP 1 Score: 263.5 bits (672), Expect = 1.2e-70 Identity = 132/203 (65.02%), Postives = 169/203 (83.25%), Query Frame = 1
BLAST of Cp4.1LG20g01510 vs. NCBI nr
Match: gi|449439443|ref|XP_004137495.1| (PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Cucumis sativus]) HSP 1 Score: 378.3 bits (970), Expect = 9.8e-102 Identity = 187/194 (96.39%), Postives = 193/194 (99.48%), Query Frame = 1
BLAST of Cp4.1LG20g01510 vs. NCBI nr
Match: gi|659066815|ref|XP_008462680.1| (PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Cucumis melo]) HSP 1 Score: 375.9 bits (964), Expect = 4.8e-101 Identity = 186/194 (95.88%), Postives = 192/194 (98.97%), Query Frame = 1
BLAST of Cp4.1LG20g01510 vs. NCBI nr
Match: gi|802599707|ref|XP_012072552.1| (PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Jatropha curcas]) HSP 1 Score: 290.4 bits (742), Expect = 2.7e-75 Identity = 144/195 (73.85%), Postives = 169/195 (86.67%), Query Frame = 1
BLAST of Cp4.1LG20g01510 vs. NCBI nr
Match: gi|703102926|ref|XP_010097595.1| (hypothetical protein L484_017406 [Morus notabilis]) HSP 1 Score: 288.5 bits (737), Expect = 1.0e-74 Identity = 144/195 (73.85%), Postives = 166/195 (85.13%), Query Frame = 1
BLAST of Cp4.1LG20g01510 vs. NCBI nr
Match: gi|1009131528|ref|XP_015882890.1| (PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Ziziphus jujuba]) HSP 1 Score: 287.0 bits (733), Expect = 3.0e-74 Identity = 145/205 (70.73%), Postives = 169/205 (82.44%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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