Lsi07G002800 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi07G002800
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_1
Location	chr07 : 3020299 .. 3027389 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGAAAAAGTGGAAAATGTATAGCCCCAACTAGGCATTTAGCAACAAACAGAAATGGTGGGCAGTAGTTTTAAGGATTTTTTTTTAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTTTTAAGGAGATGTTTTTATAAGTTTTGTTTATAAAGATGTGGACTTTGGGACTTCAATAATTATAATTAATGCTTTGAAATGGCAGACAAATTGAACTGTCTTTGAAATTGTTGTAATGTTTGTCCACTGCTCACTCTCTTAGCTCGTCAGCTTTCAGTAGGGTGTAGGACATTTTTTAATTAATTAATGAAAAAAAATATATGATTTTGGTCTTAAATTTTGAGTCTATTTTTATTTCTTTAATTTTGACTTTATTAATTTCTGTTTGGCCTTAAATTTTAAAAGATTACGTTTTAAATCTTTTAAGTTTTGAATTTAATTTTCATTTAGTTCTAGATTTCAATATTTTATATTTTTTTTACTAATGCCCACGATGGAATTAGATGTTAAGTTTTAATTAATTTTAAATAATTATGATGTGAAATTTTTTAATTAATTTTAATAGTAATAAAAATTTAATAAAAAATAATTTAATTATAATTATTTTAAACTAATTACCGACATTAATACCAAAATACGTAGTTAGTAAAAAATTAAAGTTAAAAGTGTGAGTTTTGAAACTCTAGGACTAAATTAAAACAAAACTAAAAATTCAATGGAGTACAAATATAACACTTTGAAACCTATGTACCAAATAGAAATTAACTCAAACTCATGGATAAAAGTATAACATTTTAAAATTTATGGACTAAATGAAAAGTAGACTTAAATTTAGGGATTAAAAGTTTTTTTTTTTACTCAGATTGACCCTATGTTATATGGGCGATATGGGGCCTTGTCATTCATATTTAAAAAGGACTTCGTACACTCAGATACTAACCAATGAATCATTGAACTTGCAATCAATCAATAAATCACTTTTTTTATAAACGGATGATTGAAGATACCAACTACAAGAAGAATGATCTTTGCAACAAAGTTCAAAAGACGTTTGTCCTAAATTCAAAACTATGTTTAAGAACAAACAAGTAGATAGCTTTCTTTAAGGTACTATTGTTGTTAAAAATAGAACCTTCCTTAATGGTGAAGTCTACGAGATAAGAACCCAAATCTTGTAGGTCAATGATATCAAGAGTGTTATTGGAGGTTCTGGATGAGGAACTTATTTTAAGGTTAGTAGCACCTGTAAACACTGTAATTGCATAAATTGGTTGACAAGATGGAACATGGTCAACAACACACAAACATCATTGTGGGATGAATTTGAAATAAAGGACATCAACCATAATGCATCTTTGTCCTCTACGATCCTAACAACGTTAAAATTATTGCAGGCATCACGGTCCATGGTTAAACAAGAAATATTGTACTCCAATGTTGGAAAAAGCTTAGATTAAATTAAATTGACAAAATGATTAAAATATGTGTTTGTAGCGACAAAATTTTAATAAACCGAAAGTCATGGTAGTGATTATTTTCATCCAACCTACCATTAAACAAAATCCTTAATCGTTGAATAGCCATATCAAGCTATGGGATAGATTAAGAACAATGAAACAATGAAAGAACAAATAGATAATTAATTAAAAGTAAACTATGGCCGTTTTTAGTCTAATTTGATAAAAATATGAGGTTGATTTCGTTGATAAATAAAGGAAATATGAACTAAACACTATATTTCATGTTTAAAACAAAATTAAAATAAATTTCAATGATGAAGTCAAATTTAAAATTAAGAAGATTTGGTTAGAAACGATATACATATCCTTATATTTCATGTTTAAAACGGAATTATAATAAAGATAATGATAAAAACAATTTAAAAATCGAATGATTTAGTTAGGATTAATAGAAAAGAGAATATAAATAAATGAAAACTAATATAATATGGGATGTGAAAATTCAAATTAATATTTGAAGATAGAAGATTTTTTAATACAAATTTGTAGAATTTTCAAATTAAAAAAAATTAGGTCAAAATATCTGCCTGGAAAGAGGAACTTAATTCACTTTGAATATTCTATATGAGAAATGATAGAGTCCAAATTATGAATTTGATAAATTAATTACAATATAATTATCAAAGTTGTTAGATTAATTGTAGTACAATTAAAGAAGTTGTTAAGAGCATTTTAGGATTAACATAAAATGAATTCATATGCATTTCATGTATCTTGCTATAATTTTGAAAATTTTCGTATTTGGCTATATTTTCAAGTGAAAGTGTAAATTGTGCTACATGACTCAATTTCCCTACTTTTAAAAGGAAATGAGGCCCAAATGATCAGCCCAAGAAAAAGTTCCAGCCCTTTTGGTCTTTAATTTGTGGTTATTAAAAAAAAATAATAATGAAAAATAAGTTCCACCCTTTTAGCCAGGGGTGTTCGTTGAAATCGCAAAACCGAATACCCACCGCGAATAATTTGGTTTGGTTTGGTTTACTATAATTTTAAAATTGAATTAATCCGGTTTGGTTAAAATATATATATATATACTATTTATCAACTCCCTGACTAAGCCGCCGCCGCCCCCCTCACGGCCTCTCGTCTATCGTCTCTAGTTTGAGTTCACTTCGCCGTTTCTTTACATTTTTTTTTTGTTCGTTTTGAACTTAGAGTACAGATCAACTGACCACCGTCATCAATCTATCCTCCATCGTAAATCCACAGATCCGATCCAAACATTCACCCAAACTTTTATAAACCGAAGTCTGACTCAAACAAAACCGAGTCAGAAAGAGTGGTTCGGTTCAAAATCAAAACCCAGGTATATTCGGTTTAGCAACATCCTGTGAATATTATCCTTATTTGATTGAGATATTTAGTTTTTACTTTGTGTGTGTGTTGTTTTGAAAGGAAAAAAAATACTCAAGGAAAAAAAAGGGGAAAAAAAAAGTTTTAGTGAGTGAACTAAGTTGGGTTCAAGCCAGAAGTTGGTGAGCTAATTCAATTAAGTGTATTTTCGATGTTTGAAAGTATATTTTATACCATTCAAAATTGAAGTTGTTTGGGATGTTTTTAATGTTTTACTATTAGAAAACATTTTTATGAGATTTGAGAATCGATCAAAATTGTTTTATATATTTTTAATCAATGTCGTCAAATAAAAGTATGTGATTGTTGTGAATGATAGTTGGAAAAATGTTTAATTCAAAGTATTTTTGTTTGAATTTTGTTATTGAAATGAAACTACATGTTTTGTTTCAAATGTTCCAATAGTTTTATTTTAGGAATTATATGCTATTTTGTTATTGTCAAATTTAAAATGGATATTAATGATTTGACTGAAGCTTATGAAAAGACATATTTTGGTGATTTGACATTTTTTTTTTTTATGAAGATTTATGTGTTTGTTGCACTCATAATTGTGAAATACTCATTGGAAGACAACTGTTGCAATGCCATCGGGGAGAAAAAATTAAAAAAAAATAAATAAGAAACTCAGGTTGATTTAATTTTTTTTTTTTTTTTTTTTTTTCTTTCCTGTCATTGTAGATTAAATGAGGTTTGGATTTAGGTTTTGAAGGCACCTTGTAAATTCCGACTATTTAATATCATGCTTAGATTTAATTATGTTATGTTTTTCCTTGGATATGTACAATCACAAAAATGTTAACATCTCGTTGTAAACATAATTTTGAGAGTTAAAAAAAAAAAAAAAAAATTTATAAATGTTCCTATTATTAATATGGTGATCAACTTATTTGAAATTTTATTGAGTTTGAAAAGAACTAATTTTAGAACAAATTATATAAATATCTTCATTATATATATATATATATATATATATATATTCTTTTTTTTCAATTATTATATTGATTTTCTCAACAACTAAAATAAAAATAAAAATTTTAAGTTAAAACATAAAATTCCACAAACTTTCGATATCAAAATAAGTGTTTAAATAAATTTTTAAATTTTTAAGGTGCAGACAATGAAAATTGTATGCATGTTTTAGGTGCATACAATGGAATAAAATTGAGACATTTAAAACTATAAGAATTAAATTGATTTTTTTAAAAAATAGTTCTAACATGAGGGTGGAGGATTATCTCAATGTTTTAATAAAAAATATATATTTAAATCAAATTTTTATGGGTGGTTTTAGATTAACGGGTATACTTGACAAAAAAAATAAAAATAAAAGTAAAAAAATAAAAGCTTTAGTCCAAAAATAGCATCCTAGCCTCAGAATGGGCTTAAGGGAGATGGTTAGTTCAGACCAGATCCAAATTGGCGTGCTCGGTCGAGGCCAACTAGCAAAGTAGCTAGAGGGCATGTCTCACGCATGTCCTGGTCCAAAGCATTGCCCTAGGCCCATTTTGGGGCTAAGGGAGATGCTCGACCTCAACCCAAGACTAAAGCCAATCGTAGCCAAACATGAAATCAAGCACTCCCCTTGGTTCTAGTAGGTCATGCAATTATACTAGAGTGACTCCAAAACCATGAACAACCTAGGCCAATTATCTCTATAAATACATCATTATAACTTATAGTCTGAATCTTACTCTCAAACTCTCTAGATTTCACTCTTTCACTCTCTAATTAAGCATCGGAGTGTGTGTGGCGAGTACGCGTGTGCAGTTTTTTTTGTAGGTCATATTCTTCTCCTCTTTAAACAAATTTACTAGTGATATCACAGAACGTTTGGTGGTCCAAAATTTGGCATTAACAAGTCCTCAGTTATGAGGATGTTTGCAAAAGTAAATTAAAAACTATAAACTATCCCATTTTATTTTATGGTTTACTTCCTAATCACTCCAACATTAACATTCTTTGTACTTTAATAACTGTTTTGTCTTCAAATATTTAAAAATATCGTATTTTGACCCCTTTAAATATTCTATTTTTACATTTTCCAAACGTCCCATTCAATCTAAAAGGCGCGGTCACGATACCTTCGTCTTCGCCGGCAAGTTTCTTCTCCGTCGTCTATCCGATGCCAATTTCCGCCGATTCTTCTTCCTCTTCCTCCCGCTCCTCTTCATTTCTAGAATGCGCCACTCCGACGAGTCCGAGCATTCAACTCGTTTCCAAATCGGTGTCGGATCGGCTTCTCGGCAAGTTCTTTGACGCCTCTAAATTCGACTTCGATTCTGAACAGAGTAGCTTGTGGTCCCCGCCGATTCCTCGGCGAGTGTTTCTGGATTCTCCGACCGATGTTTGCTCCGGTTACGAGGTTCTCTTGAAGCTTGACAATGCGAAGAAGGCATGGAGGAAATTCATTATCTGTTTCAGAGTAAGTTCTCTCATGATTGCATTGTGATTTATGCAGTGATTGCAAAATAGATTCCGTGTAATGTGAAAGAATCTGAAGTAGATTTAGGACTGTTTGAGAAATCGTGAAGAAATTGCGTTCTATGCTTGAGAAATTGCATTCAAGCGAATGAGAAATCGAATAGAAAATGAAACGGAAACACTATATTTACTTTTGTAATTGTCAAAGCACAAAATTAGAATCATAAACATGATTTTCCTTTTCAGTCTAGAGATATGAACCCTAAAAATGTATGGAACTGAACTATATATAACCGTTGTGTTTATATGCAGGAGGAACGGAAATTACCTTGTCATTGATTGTTTGATTGTAATCGGAAATTTATGGTCTTCATTGCAGGGATTTTGGTGTTGTTGGAATCATTGATTTCACCTTACAAGTTTTGAGCAATTCTCTCTCACAAATGATTCAGGAAGAGAAATTAGGTTGTTCTTTTGAGTATTGTGTTAATTGTATTTCTTACTATTGAATGAAGAACAAGAAGAAATCAAAATTCAGTAATCTTATAACTTTTGGTTAGAAGAATATTCACATTTTCTTTGGCTTCTCATTTTTCACACTAGAATTTGAATTTGGTATATACAGTACAGTGACCCTTCAAACTCAGGCATGCTCAGTACAGTCCTGCAACTGCAAATGGGATATTTTAAGAAGAAAAACAAAAGGGAATTTCTCTGCAATTGTCTGCTGAACAGGTAAGGTCAAGAATAACTCTGGCTAATTTGCTTTTTGGATAAGCTAAAGCAGCACATATGGAACAACCATCAACACCATGCATTGCTTTTTGCTTCCTTTTTCTGATTATAGTCCTCCTTTTGTCTGTTATAAGCTTGGATTAGATTCCTTTCCACTTCTTCTTCATCATACATATTCATACACAATATGATATATATTGACTCTTGGTGTTCTTCTTTCTGAGTGTATCCCGTTTAGGCTTCTCCTTTTTATTTCTTTTTACTTAAAACTAATATTTGGTTCACGTCTTACCCTTCGAACATATTTAGGAGTGTTTTTAAAATGACTAAAATCACTTTTGTCATTTATAAAATTACCGTGAAATATGTTTTTCATCCTTCAAAACTAATCTTAATGATTGAAAATTACATTTAAAAGTGTAAAATTGAAAATTAAATTAACTTTGAGTGATTAAAGTGTGTTTTTGAGTGATTTTAAAATCACTCCCAAACATACTCCTAATCAAGTTACCATCTATGATTGGATAATTTACTTATTTATTAAAAGACAATGATTAGGTGCAGTCTATATCATGCATCTCTTTTGTATAAGATAAGATAGTAAAAAAATACACCTGACAATTTTTCATTGGGTAACTAGTTGGGCTGCACAAAGATATGTGCCACCAACCATTAACTAATTTTTTTTTTTTTTATTAAATATGGGACAAAGGACTAAAATTTTAATTTCAAGTAAAGTAAGTAGTGTCTTATCTATTAAACTATGCTTGAATTGACTTAAGTAGGATAAAGACTAGCATAAGTAACCAAATGAAATTTAGGTTATATTCATTTATCTTTCGATTAAATCTCTTTCAACACAAAGTGAAGATTTAATTTTCTTTTCTAAAAAATAATAATTTTCTAAAAAGTACAAATACAAACAATCATATATATATTTTCCAACGTCACCATTTATGATTGAATAATTTACTTTTTATTTATTTATTTATTAAAGGATAATGATTACAGTTTATATCATGCAATTCTTTTGTATAAGATAA

mRNA sequence

ATGGGCGCGGTCACGATACCTTCGTCTTCGCCGGCAAGTTTCTTCTCCGTCGTCTATCCGATGCCAATTTCCGCCGATTCTTCTTCCTCTTCCTCCCGCTCCTCTTCATTTCTAGAATGCGCCACTCCGACGAGTCCGAGCATTCAACTCGTTTCCAAATCGGTGTCGGATCGGCTTCTCGGCAAGTTCTTTGACGCCTCTAAATTCGACTTCGATTCTGAACAGAGTAGCTTGTGGTCCCCGCCGATTCCTCGGCGAGTGTTTCTGGATTCTCCGACCGATGTTTGCTCCGGTTACGAGGTTCTCTTGAAGCTTGACAATGCGAAGAAGGCATGGAGGAAATTCATTATCTGTTTCAGATACAGTGACCCTTCAAACTCAGGCATGCTCAGTACAGTCCTGCAACTGCAAATGGGATATTTTAAGAAGAAAAACAAAAGGGAATTTCTCTGCAATTGTCTGCTGAACAGGATAATGATTACAGTTTATATCATGCAATTCTTTTGTATAAGATAA

Coding sequence (CDS)

ATGGGCGCGGTCACGATACCTTCGTCTTCGCCGGCAAGTTTCTTCTCCGTCGTCTATCCGATGCCAATTTCCGCCGATTCTTCTTCCTCTTCCTCCCGCTCCTCTTCATTTCTAGAATGCGCCACTCCGACGAGTCCGAGCATTCAACTCGTTTCCAAATCGGTGTCGGATCGGCTTCTCGGCAAGTTCTTTGACGCCTCTAAATTCGACTTCGATTCTGAACAGAGTAGCTTGTGGTCCCCGCCGATTCCTCGGCGAGTGTTTCTGGATTCTCCGACCGATGTTTGCTCCGGTTACGAGGTTCTCTTGAAGCTTGACAATGCGAAGAAGGCATGGAGGAAATTCATTATCTGTTTCAGATACAGTGACCCTTCAAACTCAGGCATGCTCAGTACAGTCCTGCAACTGCAAATGGGATATTTTAAGAAGAAAAACAAAAGGGAATTTCTCTGCAATTGTCTGCTGAACAGGATAATGATTACAGTTTATATCATGCAATTCTTTTGTATAAGATAA

Protein sequence

MGAVTIPSSSPASFFSVVYPMPISADSSSSSSRSSSFLECATPTSPSIQLVSKSVSDRLLGKFFDASKFDFDSEQSSLWSPPIPRRVFLDSPTDVCSGYEVLLKLDNAKKAWRKFIICFRYSDPSNSGMLSTVLQLQMGYFKKKNKREFLCNCLLNRIMITVYIMQFFCIR

Homology

[Close]

BLAST of Lsi07G002800 vs. TrEMBL
Match: A0A0A0KVF5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G082960 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 4.6e-34
Identity = 81/103 (78.64%), Postives = 88/103 (85.44%), Query Frame = 1


Query: 21  MPISADSSSSSSRSSSFLECATPTSPSIQLVSKSVSDRLLGKFFDASKFDFDSEQSSLWS 80
           MPIS    SSSS SSSFL+C TPTSP+IQ+VSKS SDRLL KFFDASKFDFD  QSSLWS
Sbjct: 1   MPISLH--SSSSPSSSFLQCLTPTSPTIQIVSKSASDRLLAKFFDASKFDFDYLQSSLWS 60

Query: 81  PPIPRRVFLDSPTDVCSGYEVLL-KLDNAKKAWRKFIICFRYS 123
           PPI RR+FLDSP DVCSG +V+L KL+NAKKAWRKFIICFR S
Sbjct: 61  PPIQRRLFLDSPADVCSGSKVVLSKLENAKKAWRKFIICFRVS 101

[Close]

BLAST of Lsi07G002800 vs. TrEMBL
Match: A0A067KFA4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10567 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 6.8e-22
Identity = 59/95 (62.11%), Postives = 71/95 (74.74%), Query Frame = 1


Query: 25  ADSSSSSSRSSSFLECATPTSPSIQLVSKSVSDRLLGKFFDASKFDFDSEQSSLWSPPIP 84
           A S SSSS SSS +     T+PSIQ+VSKSVS+RLLGKFFDAS++DFD EQS LWSPPIP
Sbjct: 7   AGSYSSSSYSSSLI-----TTPSIQMVSKSVSERLLGKFFDASQYDFDYEQSGLWSPPIP 66

Query: 85  RRVFLDSPTDVCSGYEVLLKLDNAKKAWRKFIICF 120
           RR+F+ S  ++CS  +   K   AKKAWR+ I CF
Sbjct: 67  RRIFVPSTGNICSEDQFFSKFKKAKKAWRRRIACF 96

[Close]

BLAST of Lsi07G002800 vs. TrEMBL
Match: A0A061F9F8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_031878 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 8.4e-20
Identity = 64/117 (54.70%), Postives = 75/117 (64.10%), Query Frame = 1


Query: 21  MPISADSSSSSSRSSSFLECATPTSPSIQLVSKSVSDRLLGKFFDASKFDFDSEQSSLWS 80
           M IS  SSS  S   S    ++ TSPSIQ+VSK+VS+RLLGKFFDAS++DFD EQS LWS
Sbjct: 1   MAISESSSSPPSSPGS----SSLTSPSIQMVSKTVSERLLGKFFDASQYDFDYEQSGLWS 60

Query: 81  PPIPRRVFLDSPTDVCSGYEVLLKLDNAKKA--WRKFIICFR----------YSDPS 126
           PP+ R VFL SP ++CS  E   KL  AKKA  WR  I CF           Y+DPS
Sbjct: 61  PPVRRSVFLTSPGNICSEDEFFSKLKKAKKACRWRLRIACFNNDNHGDNLKWYNDPS 113

[Close]

BLAST of Lsi07G002800 vs. TrEMBL
Match: V4T630_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022947mg PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.5e-18
Identity = 52/91 (57.14%), Postives = 64/91 (70.33%), Query Frame = 1


Query: 29  SSSSRSSSFLECATPTSPSIQLVSKSVSDRLLGKFFDASKFDFDSEQSSLWSPPIPRRVF 88
           S  S SS      T +S ++Q+VSKSVSDRLLGKFFDA ++DFD EQS LWSPP+PR+V+
Sbjct: 16  SCESTSSLPTFSTTGSSTTVQMVSKSVSDRLLGKFFDALQYDFDYEQSGLWSPPVPRKVY 75

Query: 89  LDSPTDVCSGYEVLLKLDNAKKAWRKFIICF 120
           L+SP  +CS  E+  KL  AKKA R    CF
Sbjct: 76  LNSPGKMCSDDEMFSKLKRAKKACRCRFFCF 106

[Close]

BLAST of Lsi07G002800 vs. TrEMBL
Match: A0A067DQ60_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g036709mg PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.5e-18
Identity = 52/91 (57.14%), Postives = 64/91 (70.33%), Query Frame = 1


Query: 29  SSSSRSSSFLECATPTSPSIQLVSKSVSDRLLGKFFDASKFDFDSEQSSLWSPPIPRRVF 88
           S  S SS      T +S ++Q+VSKSVSDRLLGKFFDA ++DFD EQS LWSPP+PR+V+
Sbjct: 16  SCESTSSLPTFSTTGSSTTVQMVSKSVSDRLLGKFFDALQYDFDYEQSGLWSPPVPRKVY 75

Query: 89  LDSPTDVCSGYEVLLKLDNAKKAWRKFIICF 120
           L+SP  +CS  E+  KL  AKKA R    CF
Sbjct: 76  LNSPGKMCSDDEMFSKLKRAKKACRCRFFCF 106

[Close]

BLAST of Lsi07G002800 vs. NCBI nr
Match: gi|700198412|gb|KGN53570.1| (hypothetical protein Csa_4G082960 [Cucumis sativus])

HSP 1 Score: 152.5 bits (384), Expect = 6.6e-34
Identity = 81/103 (78.64%), Postives = 88/103 (85.44%), Query Frame = 1


Query: 21  MPISADSSSSSSRSSSFLECATPTSPSIQLVSKSVSDRLLGKFFDASKFDFDSEQSSLWS 80
           MPIS    SSSS SSSFL+C TPTSP+IQ+VSKS SDRLL KFFDASKFDFD  QSSLWS
Sbjct: 1   MPISLH--SSSSPSSSFLQCLTPTSPTIQIVSKSASDRLLAKFFDASKFDFDYLQSSLWS 60

Query: 81  PPIPRRVFLDSPTDVCSGYEVLL-KLDNAKKAWRKFIICFRYS 123
           PPI RR+FLDSP DVCSG +V+L KL+NAKKAWRKFIICFR S
Sbjct: 61  PPIQRRLFLDSPADVCSGSKVVLSKLENAKKAWRKFIICFRVS 101

[Close]

BLAST of Lsi07G002800 vs. NCBI nr
Match: gi|643725940|gb|KDP34787.1| (hypothetical protein JCGZ_10567 [Jatropha curcas])

HSP 1 Score: 112.1 bits (279), Expect = 9.8e-22
Identity = 59/95 (62.11%), Postives = 71/95 (74.74%), Query Frame = 1


Query: 25  ADSSSSSSRSSSFLECATPTSPSIQLVSKSVSDRLLGKFFDASKFDFDSEQSSLWSPPIP 84
           A S SSSS SSS +     T+PSIQ+VSKSVS+RLLGKFFDAS++DFD EQS LWSPPIP
Sbjct: 7   AGSYSSSSYSSSLI-----TTPSIQMVSKSVSERLLGKFFDASQYDFDYEQSGLWSPPIP 66

Query: 85  RRVFLDSPTDVCSGYEVLLKLDNAKKAWRKFIICF 120
           RR+F+ S  ++CS  +   K   AKKAWR+ I CF
Sbjct: 67  RRIFVPSTGNICSEDQFFSKFKKAKKAWRRRIACF 96

[Close]

BLAST of Lsi07G002800 vs. NCBI nr
Match: gi|590610430|ref|XP_007021812.1| (Uncharacterized protein TCM_031878 [Theobroma cacao])

HSP 1 Score: 105.1 bits (261), Expect = 1.2e-19
Identity = 64/117 (54.70%), Postives = 75/117 (64.10%), Query Frame = 1


Query: 21  MPISADSSSSSSRSSSFLECATPTSPSIQLVSKSVSDRLLGKFFDASKFDFDSEQSSLWS 80
           M IS  SSS  S   S    ++ TSPSIQ+VSK+VS+RLLGKFFDAS++DFD EQS LWS
Sbjct: 1   MAISESSSSPPSSPGS----SSLTSPSIQMVSKTVSERLLGKFFDASQYDFDYEQSGLWS 60

Query: 81  PPIPRRVFLDSPTDVCSGYEVLLKLDNAKKA--WRKFIICFR----------YSDPS 126
           PP+ R VFL SP ++CS  E   KL  AKKA  WR  I CF           Y+DPS
Sbjct: 61  PPVRRSVFLTSPGNICSEDEFFSKLKKAKKACRWRLRIACFNNDNHGDNLKWYNDPS 113

[Close]

BLAST of Lsi07G002800 vs. NCBI nr
Match: gi|567899920|ref|XP_006442448.1| (hypothetical protein CICLE_v10022947mg [Citrus clementina])

HSP 1 Score: 99.8 bits (247), Expect = 5.0e-18
Identity = 52/91 (57.14%), Postives = 64/91 (70.33%), Query Frame = 1


Query: 29  SSSSRSSSFLECATPTSPSIQLVSKSVSDRLLGKFFDASKFDFDSEQSSLWSPPIPRRVF 88
           S  S SS      T +S ++Q+VSKSVSDRLLGKFFDA ++DFD EQS LWSPP+PR+V+
Sbjct: 16  SCESTSSLPTFSTTGSSTTVQMVSKSVSDRLLGKFFDALQYDFDYEQSGLWSPPVPRKVY 75

Query: 89  LDSPTDVCSGYEVLLKLDNAKKAWRKFIICF 120
           L+SP  +CS  E+  KL  AKKA R    CF
Sbjct: 76  LNSPGKMCSDDEMFSKLKRAKKACRCRFFCF 106

[Close]

BLAST of Lsi07G002800 vs. NCBI nr
Match: gi|731431929|ref|XP_010644110.1| (PREDICTED: uncharacterized protein LOC104877493 [Vitis vinifera])

HSP 1 Score: 97.4 bits (241), Expect = 2.5e-17
Identity = 59/102 (57.84%), Postives = 70/102 (68.63%), Query Frame = 1


Query: 21  MPISADSSSSSSRSSSFLECATPTSPSIQLVSKSVSDRLLGKFFDASKFDFDSEQSSLWS 80
           MP S  SS +SS S      ++P  PS+Q+VSKS SDRLLGKFFDAS+FDFD EQS LWS
Sbjct: 1   MPTSGLSSPASSSSPG---SSSPCIPSVQIVSKSASDRLLGKFFDASQFDFDYEQSGLWS 60

Query: 81  PPIPRRVFLDSPTDVCSGYEVLLKL-DNAKKA--WRKFIICF 120
           PP+ RR FL S  +  SG E+L KL  N K+A  WR+F  CF
Sbjct: 61  PPVQRRAFLTSSENCGSGGEMLAKLKSNVKRAQLWRRF-FCF 98

The following BLAST results are available for this feature:

BLAST of Lsi07G002800 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi07G002800 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVF5_CUCSA	4.6e-34	78.64	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G082960 PE=4 SV=1	[more]
A0A067KFA4_JATCU	6.8e-22	62.11	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10567 PE=4 SV=1	[more]
A0A061F9F8_THECC	8.4e-20	54.70	Uncharacterized protein OS=Theobroma cacao GN=TCM_031878 PE=4 SV=1	[more]
V4T630_9ROSI	3.5e-18	57.14	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022947mg PE=4 SV=1	[more]
A0A067DQ60_CITSI	3.5e-18	57.14	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g036709mg PE=4 SV=1	[more]

BLAST of Lsi07G002800 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Lsi07G002800 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700198412\|gb\|KGN53570.1\|	6.6e-34	78.64	hypothetical protein Csa_4G082960 [Cucumis sativus]	[more]
gi\|643725940\|gb\|KDP34787.1\|	9.8e-22	62.11	hypothetical protein JCGZ_10567 [Jatropha curcas]	[more]
gi\|590610430\|ref\|XP_007021812.1\|	1.2e-19	54.70	Uncharacterized protein TCM_031878 [Theobroma cacao]	[more]
gi\|567899920\|ref\|XP_006442448.1\|	5.0e-18	57.14	hypothetical protein CICLE_v10022947mg [Citrus clementina]	[more]
gi\|731431929\|ref\|XP_010644110.1\|	2.5e-17	57.84	PREDICTED: uncharacterized protein LOC104877493 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G002800.1	Lsi07G002800.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34287	FAMILY NOT NAMED	coord: 1..119 score: 4.3
None	No IPR available	PANTHER	PTHR34287:SF1	SUBFAMILY NOT NAMED	coord: 1..119 score: 4.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi07G002800	Csa4G082960	Cucumber (Chinese Long) v2	culsiB305
Lsi07G002800	CmaCh04G006700	Cucurbita maxima (Rimu)	cmalsiB702
Lsi07G002800	CmoCh04G007160	Cucurbita moschata (Rifu)	cmolsiB696
Lsi07G002800	CmoCh16G004680	Cucurbita moschata (Rifu)	cmolsiB318
Lsi07G002800	Cla005374	Watermelon (97103) v1	lsiwmB448
Lsi07G002800	ClCG07G010220	Watermelon (Charleston Gray)	lsiwcgB414
Lsi07G002800	Cla97C07G136900	Watermelon (97103) v2	lsiwmbB413
Lsi07G002800	Bhi01G002485	Wax gourd	lsiwgoB551
Lsi07G002800	Cp4.1LG01g00660	Cucurbita pepo (Zucchini)	cpelsiB381
Lsi07G002800	Cp4.1LG14g03550	Cucurbita pepo (Zucchini)	cpelsiB188
Lsi07G002800	CsGy4G007760	Cucumber (Gy14) v2	cgyblsiB279
Lsi07G002800	Carg13086	Silver-seed gourd	carlsiB042
Lsi07G002800	Carg11365	Silver-seed gourd	carlsiB597
Lsi07G002800	CsaV3_4G008110	Cucumber (Chinese Long) v3	cuclsiB324

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi07G002800	Cucumber (Gy14) v1	cgylsiB444
Lsi07G002800	Cucurbita maxima (Rimu)	cmalsiB329
Lsi07G002800	Cucurbita maxima (Rimu)	cmalsiB618
Lsi07G002800	Wild cucumber (PI 183967)	cpilsiB305
Lsi07G002800	Wild cucumber (PI 183967)	cpilsiB477
Lsi07G002800	Cucumber (Chinese Long) v2	culsiB469
Lsi07G002800	Melon (DHL92) v3.5.1	lsimeB456
Lsi07G002800	Melon (DHL92) v3.5.1	lsimeB460
Lsi07G002800	Watermelon (Charleston Gray)	lsiwcgB396
Lsi07G002800	Watermelon (97103) v1	lsiwmB455
Lsi07G002800	Cucumber (Gy14) v2	cgyblsiB435
Lsi07G002800	Melon (DHL92) v3.6.1	lsimedB478
Lsi07G002800	Cucumber (Chinese Long) v3	cuclsiB499
Lsi07G002800	Watermelon (97103) v2	lsiwmbB393