Lsi07G002510 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi07G002510
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionGATA transcription factor, putative
Locationchr07 : 2782895 .. 2784430 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTACTCTTCTATTTCCCCCACCCCCATTTTATTCCTACCAGAATATCAAATCATGATGCACCACTACGGCGGCGGAGGCGGCGGCGCCTCTTCTTTTTCCGTCTTCTTGTCTGTCCCCAACCACGGCGCCGCCGACATTTATTCTTCTTCTAGTAATTACACCTCTTCCTCCTCCTCCTCCTCTCCATCTTCTGTTGATTGTACGCTCTCTCTCGGAACTCCATCCACGCGCTCATCGGAATTCGACGGTGACAAACGCGCCGCCGCCCGAAATCACCACCGCCGCTCCGCTGGTTCTTATGTCTCTAACTTCTGTTGGGATTTGTTGCATCCTAAGCACAAGACTTCTGCACGTGCTGCTGCTCCTCCTAATAATATAACCGCCGCCGTGACTACCGGTGGCGATCCGCTTCTTGCTCGGCGTTGCGCTAACTGCGATACCACTTCCACTCCGCTGTGGCGAAATGGGCCGAGAGGGCCTAAGGTAAATCACGTGTTTTCAAAATACTCCTAATTATTTTATTATTATTTTTCTTACATTCGAGATTTTTTCCTCTTTCCTCTTTCCTTTTTTTTTTTTTTTAAAATAGATTTGAACCCTTTTTTTTTATACAAAAGAAATAGATTTGAATCTATTAGATAAAGATGGGTTTTCATTTCCAAAATAAATCAATAATGTGATTAACTATATATAATTACAACCATGGTGAGATTTTTTCATCTTTTCAATACGAAGTTTTCAACAACTTCGAAGTAATTTTAGAGTAGCTTAAAATTAATTTCGCCATATTTTTAATATTTTAAAATTAAATGTGAAAATTTCAATACTGCATTGACCAACATTAAAGTGATTTCGAAACTCCTACATTTTCTTTTAATACAATTGCATTGGTTAAAGCATTATGATCAGATATTTGAATCTTAATTAGATTTATAATCAATGTAATTATCTTTTTGCTCGTTTTGGAAAAGAAAGGAAAACATTATATATTTTTGAAGTTTTTACTCTTTTAACTTTTCAATCCGAATATATAAATTAAAAAACAGAAATATGAGAAAGTTCAAGATATATGTTTAAATAATGCTGAATACCATTTTTCTTTAGGGAAAAAAAAAAAATTTGAATTTAAAATCATTCAAATTTAAAAGTTTGAGGTATTTTAAATTTAATAACACAATTTATTTGTGAATGAATTTGGAGTGCAGTCGCTATGCAATGCGTGTGGGATTCGTTTCAAGAAGGAAGAACGGAGGGCGGCGGCAGCGACGGTGAACAGCACGGCGGCAGAATCAAACCACCACCACCACCACCACCCAATGTTCAACGGAAACTATACAAATTCAAGTACGTGGGTCCCACATCAGTCACCAGCGACGACTCAGAAACATCCCTGCCTGTCAGCGGCCATAGGAAACGACGACGTTGGAAGAACCGAACCGGAAAATGGGATTTCATTCCTGTCTTGGCGTCTTAACGTTGCAAATACCGATCACCGGCCCACCCTCGTCCATGATTTCACAAGATGAGCCAACCC

mRNA sequence

CTTACTCTTCTATTTCCCCCACCCCCATTTTATTCCTACCAGAATATCAAATCATGATGCACCACTACGGCGGCGGAGGCGGCGGCGCCTCTTCTTTTTCCGTCTTCTTGTCTGTCCCCAACCACGGCGCCGCCGACATTTATTCTTCTTCTAGTAATTACACCTCTTCCTCCTCCTCCTCCTCTCCATCTTCTGTTGATTGTACGCTCTCTCTCGGAACTCCATCCACGCGCTCATCGGAATTCGACGGTGACAAACGCGCCGCCGCCCGAAATCACCACCGCCGCTCCGCTGGTTCTTATGTCTCTAACTTCTGTTGGGATTTGTTGCATCCTAAGCACAAGACTTCTGCACGTGCTGCTGCTCCTCCTAATAATATAACCGCCGCCGTGACTACCGGTGGCGATCCGCTTCTTGCTCGGCGTTGCGCTAACTGCGATACCACTTCCACTCCGCTGTGGCGAAATGGGCCGAGAGGGCCTAAGTCGCTATGCAATGCGTGTGGGATTCGTTTCAAGAAGGAAGAACGGAGGGCGGCGGCAGCGACGGTGAACAGCACGGCGGCAGAATCAAACCACCACCACCACCACCACCCAATGTTCAACGGAAACTATACAAATTCAAGTACGTGGGTCCCACATCAGTCACCAGCGACGACTCAGAAACATCCCTGCCTGTCAGCGGCCATAGGAAACGACGACGTTGGAAGAACCGAACCGGAAAATGGGATTTCATTCCTGTCTTGGCGTCTTAACGTTGCAAATACCGATCACCGGCCCACCCTCGTCCATGATTTCACAAGATGAGCCAACCC

Coding sequence (CDS)

ATGATGCACCACTACGGCGGCGGAGGCGGCGGCGCCTCTTCTTTTTCCGTCTTCTTGTCTGTCCCCAACCACGGCGCCGCCGACATTTATTCTTCTTCTAGTAATTACACCTCTTCCTCCTCCTCCTCCTCTCCATCTTCTGTTGATTGTACGCTCTCTCTCGGAACTCCATCCACGCGCTCATCGGAATTCGACGGTGACAAACGCGCCGCCGCCCGAAATCACCACCGCCGCTCCGCTGGTTCTTATGTCTCTAACTTCTGTTGGGATTTGTTGCATCCTAAGCACAAGACTTCTGCACGTGCTGCTGCTCCTCCTAATAATATAACCGCCGCCGTGACTACCGGTGGCGATCCGCTTCTTGCTCGGCGTTGCGCTAACTGCGATACCACTTCCACTCCGCTGTGGCGAAATGGGCCGAGAGGGCCTAAGTCGCTATGCAATGCGTGTGGGATTCGTTTCAAGAAGGAAGAACGGAGGGCGGCGGCAGCGACGGTGAACAGCACGGCGGCAGAATCAAACCACCACCACCACCACCACCCAATGTTCAACGGAAACTATACAAATTCAAGTACGTGGGTCCCACATCAGTCACCAGCGACGACTCAGAAACATCCCTGCCTGTCAGCGGCCATAGGAAACGACGACGTTGGAAGAACCGAACCGGAAAATGGGATTTCATTCCTGTCTTGGCGTCTTAACGTTGCAAATACCGATCACCGGCCCACCCTCGTCCATGATTTCACAAGATGA

Protein sequence

MMHHYGGGGGGASSFSVFLSVPNHGAADIYSSSSNYTSSSSSSSPSSVDCTLSLGTPSTRSSEFDGDKRAAARNHHRRSAGSYVSNFCWDLLHPKHKTSARAAAPPNNITAAVTTGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSTAAESNHHHHHHPMFNGNYTNSSTWVPHQSPATTQKHPCLSAAIGNDDVGRTEPENGISFLSWRLNVANTDHRPTLVHDFTR
Homology
[Close]
BLAST of Lsi07G002510 vs. Swiss-Prot
Match: GAT18_ARATH (GATA transcription factor 18 OS=Arabidopsis thaliana GN=GATA18 PE=2 SV=2)

HSP 1 Score: 169.9 bits (429), Expect = 3.6e-41
Identity = 128/296 (43.24%), Postives = 153/296 (51.69%), Query Frame = 1 

Query: 1   MMHHYG-------GGGGGASSFSVFLSVPNHGAADIYSSSSNYTSSSSSSSPSSVDCTLS 60
           M HH+             A S+S+  S+ N G  +   +  +Y  SSS      VDCTLS
Sbjct: 20  MFHHHSQSCCYNNNNNSNAGSYSMVFSMQNGGVFE--QNGEDYHHSSSL-----VDCTLS 79

Query: 61  LGTPSTRSSEFDGDKRAAARNHHRRSAGSYVSNFCWDLLHPKHKTSARAAAPPNNITAAV 120
           LGTPSTR  E D  +R +  +     A S +SNF WDL+H K+  S    AP NN+ +  
Sbjct: 80  LGTPSTRLCEEDEKRRRSTSS----GASSCISNF-WDLIHTKNNNSK--TAPYNNVPSFS 139

Query: 121 TT-----------------GGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKK 180
                              GGD LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKK
Sbjct: 140 ANKPSRGCSGGGGGGGGGGGGDSLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKK 199

Query: 181 EERRAAAATVNSTAA-------ESNHH----HHHHPMFNGNYTNSSTWVPHQSPATTQKH 240
           EERR  AAT N+          +  HH    +++H   N N  N + W  H S   TQ+ 
Sbjct: 200 EERRTTAATGNTVVGAAPVQTDQYGHHNSGYNNYHAATNNNNNNGTPWAHHHS---TQRV 259

Query: 241 PCLSAAIG---NDDVGRTEPEN--------GISFLSWRLNVANTDHRPTLVHDFTR 251
           PC   A      DD G     N        G+ FLSWRLNVA+   R +LVHDFTR
Sbjct: 260 PCNYPANEIRFMDDYGSGVANNVESDGAHGGVPFLSWRLNVAD---RASLVHDFTR 295

[Close]
BLAST of Lsi07G002510 vs. Swiss-Prot
Match: GAT19_ARATH (GATA transcription factor 19 OS=Arabidopsis thaliana GN=GATA19 PE=2 SV=2)

HSP 1 Score: 141.7 bits (356), Expect = 1.1e-32
Identity = 111/258 (43.02%), Postives = 135/258 (52.33%), Query Frame = 1 

Query: 15  FSVFLSVPNHGAADIYSSSSNYTSSSSSSSPSSVDCTLSLGTPSTRSSEFDGDKRAAARN 74
           FS+F S  N    D+   SS Y         +SVDCTLSLGTPSTR    D ++R ++  
Sbjct: 3   FSMFFSPEN----DVSHHSSPY---------ASVDCTLSLGTPSTRLCNEDDERRFSS-- 62

Query: 75  HHRRSAGSYVSNFCWDLLHPKHKTSARAAAPPNNITAAVTTGGDPLLARRCANCDTTSTP 134
           H   + G       WD L+   K                  GG  LLARRCANCDTTSTP
Sbjct: 63  HTSDTIG-------WDFLNGSKKGGGG--------------GGHNLLARRCANCDTTSTP 122

Query: 135 LWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSTA---------------AESNHHHHH 194
           LWRNGPRGPKSLCNACGIRFKKEERRA+ A  NST+               A +N+++++
Sbjct: 123 LWRNGPRGPKSLCNACGIRFKKEERRASTAR-NSTSGGGSTAAGVPTLDHQASANYYYNN 182

Query: 195 HPMFNGNYTNSSTW--------VPHQSPATTQKHPCLSAAIGNDDVGRTEPENGISFLSW 250
               N  Y +SS W        VP+ SPA  +        + + DV  T+P     FLSW
Sbjct: 183 ----NNQYASSSPWHHQHNTQRVPYYSPANNEYSYVDDVRVVDHDV-TTDP-----FLSW 210

[Close]
BLAST of Lsi07G002510 vs. Swiss-Prot
Match: GAT20_ARATH (GATA transcription factor 20 OS=Arabidopsis thaliana GN=GATA20 PE=2 SV=2)

HSP 1 Score: 115.2 bits (287), Expect = 1.1e-24
Identity = 94/239 (39.33%), Postives = 125/239 (52.30%), Query Frame = 1 

Query: 13  SSFSVFLSVPNHGAADIYSSSSNYTSSSSSSSPSSVDCTLSLGTPSTRSSEFDGDKRAAA 72
           S+FS+F S  N        +  NY   ++ SS +SVDCTLSLGTPSTR    D   R ++
Sbjct: 8   SNFSMFFSSENDD-----QNHHNYDPYNNFSSSTSVDCTLSLGTPSTR---LDDHHRFSS 67

Query: 73  RNHHRRSAGSYVSNFCWDLLHPKHKTSARAAAPPNNITAAVTTGGDP-LLARRCANCDTT 132
            N +  S   Y+           H  +A+        T++   GG    L RRCA+CDTT
Sbjct: 68  ANSNNISGDFYI-----------HGGNAK--------TSSYKKGGVAHSLPRRCASCDTT 127

Query: 133 STPLWRNGPRGPKSLCNACGIRFKKEERRAAAATV-----NSTAAE-------------S 192
           STPLWRNGP+GPKSLCNACGIRFKKEERRA A  +      S+AAE              
Sbjct: 128 STPLWRNGPKGPKSLCNACGIRFKKEERRATARNLTISGGGSSAAEVPVENSYNGGGNYY 187

Query: 193 NHHHHHHPMFNGNYTNSSTW-VPHQSPATTQKHPCLSAAIGNDDVGRTEPENGISFLSW 232
           +HHHHH+   + ++ + +T  VP+ SP    ++P +      D+V         SF+SW
Sbjct: 188 SHHHHHYASSSPSWAHQNTQRVPYFSPVPEMEYPYV------DNV------TASSFMSW 207

[Close]
BLAST of Lsi07G002510 vs. Swiss-Prot
Match: GAT22_ARATH (Putative GATA transcription factor 22 OS=Arabidopsis thaliana GN=GATA22 PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 7.9e-12
Identity = 33/48 (68.75%), Postives = 41/48 (85.42%), Query Frame = 1 

Query: 123 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSTA 171
           R C++C+TT TPLWR+GPRGPKSLCNACGIR +++ RRAA AT  +TA
Sbjct: 199 RICSDCNTTKTPLWRSGPRGPKSLCNACGIR-QRKARRAAMATATATA 245

[Close]
BLAST of Lsi07G002510 vs. Swiss-Prot
Match: GAT21_ARATH (GATA transcription factor 21 OS=Arabidopsis thaliana GN=GATA21 PE=1 SV=2)

HSP 1 Score: 69.3 bits (168), Expect = 6.7e-11
Identity = 30/42 (71.43%), Postives = 35/42 (83.33%), Query Frame = 1 

Query: 123 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAA 165
           R C++C+TT TPLWR+GPRGPKSLCNACGIR +K  R A AA
Sbjct: 230 RVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMAA 271

[Close]
BLAST of Lsi07G002510 vs. TrEMBL
Match: A0A0A0KY15_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G046650 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 1.1e-118
Identity = 227/260 (87.31%), Postives = 235/260 (90.38%), Query Frame = 1 

Query: 1   MMHHYGGGGGG-ASSFSVFLSVPNHGAADIYSSSSNYTSSSSSSSPSSVDCTLSLGTPST 60
           MMHHYGGGGGG ASSFSVFLSVPNHGAAD+YSSS+NY  +SSSSSPSSVDCTLSLGTPST
Sbjct: 1   MMHHYGGGGGGSASSFSVFLSVPNHGAADMYSSSTNY--ASSSSSPSSVDCTLSLGTPST 60

Query: 61  RSSEFDGDKRAAA---RNHHRRSAGSYVSNFCWDLLHPKHKTSARAA----APPNNITAA 120
           RSSEFDGDKRAAA   RNHHRRSAGSYVSNFCWDLLHPKHKTS R      A  NNI AA
Sbjct: 61  RSSEFDGDKRAAAAAARNHHRRSAGSYVSNFCWDLLHPKHKTSGRGGGGGGASNNNINAA 120

Query: 121 VTTGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSTAAE 180
           V+ GGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNS+ AE
Sbjct: 121 VSNGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSSVAE 180

Query: 181 SN--HHHHHHPMFNGNYTNSSTWVPHQSPATTQKHPCLSAAIGNDDVGRTEPENGISFLS 240
           SN  HHHHHHPMFNG+YTNS+TWVP Q PATTQKHPCLSAAIGN+DVG   PENGISFLS
Sbjct: 181 SNHHHHHHHHPMFNGSYTNSNTWVPQQLPATTQKHPCLSAAIGNEDVG---PENGISFLS 240

Query: 241 WRLNVANTDHRPTLVHDFTR 251
           WRLNVANTDHRPTLVHDFTR
Sbjct: 241 WRLNVANTDHRPTLVHDFTR 255

[Close]
BLAST of Lsi07G002510 vs. TrEMBL
Match: A5C2I6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009032 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.2e-51
Identity = 136/251 (54.18%), Postives = 164/251 (65.34%), Query Frame = 1 

Query: 12  ASSFSVFLSVPNHGAADIYSSSSNYTSSSSSSSPSSVDCTLSLGTPSTRSSEFDGDKRAA 71
           ++SFS+  S+PNH   D    +  Y  +SSSSS  SVDCTLSLGTPSTR +  D D++  
Sbjct: 99  SNSFSMLFSMPNHKPFD---ETDMYPFTSSSSS--SVDCTLSLGTPSTRLT--DNDEK-- 158

Query: 72  ARNHHRRSAGSYVSNFCWDLLHPKHKTSARAAAPP---NNITAAVTTGGDPLLARRCANC 131
            R HH R AGS VSNFCWD+L  KH  SA    P    ++ +++  + GDPLLARRCANC
Sbjct: 159 -RMHHDRRAGSCVSNFCWDILQXKHTPSAPTHKPSRGGSSGSSSNNSAGDPLLARRCANC 218

Query: 132 DTTSTPLWRNGPRGPKSLCNACGIRFKKEERR--AAAATVNSTAAESNHHH---HHHPMF 191
           DTTSTPLWRNGPRGPKSLCNACGIRFKKEERR  AAAAT  +TA      H    HH   
Sbjct: 219 DTTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAAAATTGATAGVMEPQHIMISHH--- 278

Query: 192 NGNYTNSSTWVPHQSPATTQKHPCLSAAIGND----DVGRTEPENGISFLSWRLNVANTD 251
                 +++WV H   + TQK PCLS A+GN+    +    + + GI FLSWRLNV +  
Sbjct: 279 ------NNSWVHH---SQTQKMPCLSPAMGNEFRFIEDDDRDSDTGIPFLSWRLNVTD-- 324

[Close]
BLAST of Lsi07G002510 vs. TrEMBL
Match: A0A068U107_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00037224001 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.5e-49
Identity = 130/254 (51.18%), Postives = 160/254 (62.99%), Query Frame = 1 

Query: 12  ASSFSVFLSVPNHGAADIYSSSSNYTSSSSSSSPSSVDCTLSLGTPSTRSSEFDGDKRAA 71
           A+SFS+  S+PNH       ++  Y+ +SS  S SSVDCTLSLGTPSTR +  D +KR +
Sbjct: 29  ANSFSMLFSMPNHHNKPFDETAEMYSFASSPPS-SSVDCTLSLGTPSTRLTNNDTEKRRS 88

Query: 72  ARNHHRRSAGSYVSNFCWDLLHPKHKT-----SARAAAPPNNITAAVTTGGDPLLARRCA 131
                     SY+SNFCWD+L  KH +     S+  ++  N+ T + T GGD LLARRCA
Sbjct: 89  ----------SYMSNFCWDILQSKHSSNSPHHSSHKSSRANSHTNSNTGGGDGLLARRCA 148

Query: 132 NCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNS------TAAESNHHHHHH 191
           NCDTTSTPLWRNGP+GPKSLCNACGIRFKKEERRA+AA   S        A+S H     
Sbjct: 149 NCDTTSTPLWRNGPKGPKSLCNACGIRFKKEERRASAAAATSGTNGVPGGADSQH----- 208

Query: 192 PMFNGNYTNSSTWVPHQSPATTQKHPCLSAAIGND----DVGRTEPENGISFLSWRLNVA 251
            M N      S+WV H   + TQK P LS+A GN+    D    + +NG+ FLSWRLNV 
Sbjct: 209 -MLN------SSWVHH---SQTQKMPYLSSAYGNEFRFIDDDDRDSDNGVPFLSWRLNVT 253

[Close]
BLAST of Lsi07G002510 vs. TrEMBL
Match: M5VSX0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014930mg PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.5e-49
Identity = 134/268 (50.00%), Postives = 161/268 (60.07%), Query Frame = 1 

Query: 13  SSFSVFLSVPNHGAADIYSSSSNYTSSSS--------SSSPSSVDCTLSLGTPSTRSSEF 72
           SSFS+  S+PNH     +    ++ +           +SS SSVDCTLSLGTPSTR +E 
Sbjct: 28  SSFSMLFSMPNHHKPYDHHHHHHHETQHDHHNHMYPFASSSSSVDCTLSLGTPSTRLTEN 87

Query: 73  D---GDKRAAARNHHRRSAGSYVSNFCWDLLHPKHKTSA------------RAAAPPNNI 132
           D    DKR   RN  R      VSNFCWDLL PKH  ++            R+    N +
Sbjct: 88  DVVLDDKRT--RNERRS-----VSNFCWDLLQPKHHATSATSSHHHKNGSHRSGGNGNGV 147

Query: 133 TAAVTTGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNST 192
           + AV +  DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA AA  N  
Sbjct: 148 SNAVHSNNDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAAAANGG 207

Query: 193 AAESNHHHHHHPMFNGNYTNSSTWVPHQSPATTQKHPCLSAAIGN------DDVGRTEPE 251
           ++      H+  M + ++ N+S W+PH   + TQK PC S A+GN      DD    E +
Sbjct: 208 SSSVVGMDHNSHMLSQHHHNNS-WMPH---SQTQKMPCFSPAMGNEFRFMEDDTAHHEND 267

[Close]
BLAST of Lsi07G002510 vs. TrEMBL
Match: V4RVT5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026328mg PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 9.6e-49
Identity = 135/252 (53.57%), Postives = 158/252 (62.70%), Query Frame = 1 

Query: 12  ASSFSVFLSVPNHGAADIYSSSSNYTSSSSSSSPSSVDCTLSLGTPSTRSSEFDGDKRAA 71
           ++SFS+  S+PNH + D        T   +  SPSSVDCTLSLGTPSTR SE D +KR  
Sbjct: 28  SNSFSMLFSMPNHKSYD-------ETDMYAFMSPSSVDCTLSLGTPSTRLSE-DDEKRI- 87

Query: 72  ARNHHRRSAGSYVSNFCWDLLHPK----------HKTSARAAAPPNNITAAVTTGGDPLL 131
            R+  RRSA + +++FCWD LH K          HKTS       N I+++  +G DPLL
Sbjct: 88  -RHDQRRSASNCMTDFCWDFLHTKNSPYNTAQQNHKTSRGGNNSSNTISSS--SGNDPLL 147

Query: 132 ARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSTAAESNHHHHHHP 191
           ARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA AA  NS+   S     H  
Sbjct: 148 ARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAANANSSNIASAAEQPH-- 207

Query: 192 MFNGNYTNSSTWVPHQSPATTQKHPCLSAAIG---NDDVGRTEPENGISFLSWRLNVANT 251
              G Y NS  WV  Q  A +QK PC S A      +D  +T  + G+ FLSWRLNVA+ 
Sbjct: 208 ---GYYNNS--WVQVQQ-AQSQKMPCFSPANEFRFIEDSDQTS-DTGVPFLSWRLNVAD- 255

[Close]
BLAST of Lsi07G002510 vs. TAIR10
Match: AT3G50870.1 (AT3G50870.1 GATA type zinc finger transcription factor family protein)

HSP 1 Score: 169.9 bits (429), Expect = 2.0e-42
Identity = 128/296 (43.24%), Postives = 153/296 (51.69%), Query Frame = 1 

Query: 1   MMHHYG-------GGGGGASSFSVFLSVPNHGAADIYSSSSNYTSSSSSSSPSSVDCTLS 60
           M HH+             A S+S+  S+ N G  +   +  +Y  SSS      VDCTLS
Sbjct: 20  MFHHHSQSCCYNNNNNSNAGSYSMVFSMQNGGVFE--QNGEDYHHSSSL-----VDCTLS 79

Query: 61  LGTPSTRSSEFDGDKRAAARNHHRRSAGSYVSNFCWDLLHPKHKTSARAAAPPNNITAAV 120
           LGTPSTR  E D  +R +  +     A S +SNF WDL+H K+  S    AP NN+ +  
Sbjct: 80  LGTPSTRLCEEDEKRRRSTSS----GASSCISNF-WDLIHTKNNNSK--TAPYNNVPSFS 139

Query: 121 TT-----------------GGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKK 180
                              GGD LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKK
Sbjct: 140 ANKPSRGCSGGGGGGGGGGGGDSLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKK 199

Query: 181 EERRAAAATVNSTAA-------ESNHH----HHHHPMFNGNYTNSSTWVPHQSPATTQKH 240
           EERR  AAT N+          +  HH    +++H   N N  N + W  H S   TQ+ 
Sbjct: 200 EERRTTAATGNTVVGAAPVQTDQYGHHNSGYNNYHAATNNNNNNGTPWAHHHS---TQRV 259

Query: 241 PCLSAAIG---NDDVGRTEPEN--------GISFLSWRLNVANTDHRPTLVHDFTR 251
           PC   A      DD G     N        G+ FLSWRLNVA+   R +LVHDFTR
Sbjct: 260 PCNYPANEIRFMDDYGSGVANNVESDGAHGGVPFLSWRLNVAD---RASLVHDFTR 295

[Close]
BLAST of Lsi07G002510 vs. TAIR10
Match: AT4G36620.1 (AT4G36620.1 GATA transcription factor 19)

HSP 1 Score: 141.7 bits (356), Expect = 6.0e-34
Identity = 111/258 (43.02%), Postives = 135/258 (52.33%), Query Frame = 1 

Query: 15  FSVFLSVPNHGAADIYSSSSNYTSSSSSSSPSSVDCTLSLGTPSTRSSEFDGDKRAAARN 74
           FS+F S  N    D+   SS Y         +SVDCTLSLGTPSTR    D ++R ++  
Sbjct: 3   FSMFFSPEN----DVSHHSSPY---------ASVDCTLSLGTPSTRLCNEDDERRFSS-- 62

Query: 75  HHRRSAGSYVSNFCWDLLHPKHKTSARAAAPPNNITAAVTTGGDPLLARRCANCDTTSTP 134
           H   + G       WD L+   K                  GG  LLARRCANCDTTSTP
Sbjct: 63  HTSDTIG-------WDFLNGSKKGGGG--------------GGHNLLARRCANCDTTSTP 122

Query: 135 LWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSTA---------------AESNHHHHH 194
           LWRNGPRGPKSLCNACGIRFKKEERRA+ A  NST+               A +N+++++
Sbjct: 123 LWRNGPRGPKSLCNACGIRFKKEERRASTAR-NSTSGGGSTAAGVPTLDHQASANYYYNN 182

Query: 195 HPMFNGNYTNSSTW--------VPHQSPATTQKHPCLSAAIGNDDVGRTEPENGISFLSW 250
               N  Y +SS W        VP+ SPA  +        + + DV  T+P     FLSW
Sbjct: 183 ----NNQYASSSPWHHQHNTQRVPYYSPANNEYSYVDDVRVVDHDV-TTDP-----FLSW 210

[Close]
BLAST of Lsi07G002510 vs. TAIR10
Match: AT2G18380.1 (AT2G18380.1 GATA transcription factor 20)

HSP 1 Score: 115.2 bits (287), Expect = 6.0e-26
Identity = 94/239 (39.33%), Postives = 125/239 (52.30%), Query Frame = 1 

Query: 13  SSFSVFLSVPNHGAADIYSSSSNYTSSSSSSSPSSVDCTLSLGTPSTRSSEFDGDKRAAA 72
           S+FS+F S  N        +  NY   ++ SS +SVDCTLSLGTPSTR    D   R ++
Sbjct: 8   SNFSMFFSSENDD-----QNHHNYDPYNNFSSSTSVDCTLSLGTPSTR---LDDHHRFSS 67

Query: 73  RNHHRRSAGSYVSNFCWDLLHPKHKTSARAAAPPNNITAAVTTGGDP-LLARRCANCDTT 132
            N +  S   Y+           H  +A+        T++   GG    L RRCA+CDTT
Sbjct: 68  ANSNNISGDFYI-----------HGGNAK--------TSSYKKGGVAHSLPRRCASCDTT 127

Query: 133 STPLWRNGPRGPKSLCNACGIRFKKEERRAAAATV-----NSTAAE-------------S 192
           STPLWRNGP+GPKSLCNACGIRFKKEERRA A  +      S+AAE              
Sbjct: 128 STPLWRNGPKGPKSLCNACGIRFKKEERRATARNLTISGGGSSAAEVPVENSYNGGGNYY 187

Query: 193 NHHHHHHPMFNGNYTNSSTW-VPHQSPATTQKHPCLSAAIGNDDVGRTEPENGISFLSW 232
           +HHHHH+   + ++ + +T  VP+ SP    ++P +      D+V         SF+SW
Sbjct: 188 SHHHHHYASSSPSWAHQNTQRVPYFSPVPEMEYPYV------DNV------TASSFMSW 207

[Close]
BLAST of Lsi07G002510 vs. TAIR10
Match: AT4G26150.1 (AT4G26150.1 cytokinin-responsive gata factor 1)

HSP 1 Score: 72.4 bits (176), Expect = 4.4e-13
Identity = 33/48 (68.75%), Postives = 41/48 (85.42%), Query Frame = 1 

Query: 123 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSTA 171
           R C++C+TT TPLWR+GPRGPKSLCNACGIR +++ RRAA AT  +TA
Sbjct: 199 RICSDCNTTKTPLWRSGPRGPKSLCNACGIR-QRKARRAAMATATATA 245

[Close]
BLAST of Lsi07G002510 vs. TAIR10
Match: AT5G56860.1 (AT5G56860.1 GATA type zinc finger transcription factor family protein)

HSP 1 Score: 69.3 bits (168), Expect = 3.8e-12
Identity = 30/42 (71.43%), Postives = 35/42 (83.33%), Query Frame = 1 

Query: 123 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAA 165
           R C++C+TT TPLWR+GPRGPKSLCNACGIR +K  R A AA
Sbjct: 230 RVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMAA 271

[Close]
BLAST of Lsi07G002510 vs. NCBI nr
Match: gi|778690730|ref|XP_004146553.2| (PREDICTED: GATA transcription factor 18-like [Cucumis sativus])

HSP 1 Score: 434.1 bits (1115), Expect = 1.6e-118
Identity = 227/260 (87.31%), Postives = 235/260 (90.38%), Query Frame = 1 

Query: 1   MMHHYGGGGGG-ASSFSVFLSVPNHGAADIYSSSSNYTSSSSSSSPSSVDCTLSLGTPST 60
           MMHHYGGGGGG ASSFSVFLSVPNHGAAD+YSSS+NY  +SSSSSPSSVDCTLSLGTPST
Sbjct: 1   MMHHYGGGGGGSASSFSVFLSVPNHGAADMYSSSTNY--ASSSSSPSSVDCTLSLGTPST 60

Query: 61  RSSEFDGDKRAAA---RNHHRRSAGSYVSNFCWDLLHPKHKTSARAA----APPNNITAA 120
           RSSEFDGDKRAAA   RNHHRRSAGSYVSNFCWDLLHPKHKTS R      A  NNI AA
Sbjct: 61  RSSEFDGDKRAAAAAARNHHRRSAGSYVSNFCWDLLHPKHKTSGRGGGGGGASNNNINAA 120

Query: 121 VTTGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSTAAE 180
           V+ GGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNS+ AE
Sbjct: 121 VSNGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSSVAE 180

Query: 181 SN--HHHHHHPMFNGNYTNSSTWVPHQSPATTQKHPCLSAAIGNDDVGRTEPENGISFLS 240
           SN  HHHHHHPMFNG+YTNS+TWVP Q PATTQKHPCLSAAIGN+DVG   PENGISFLS
Sbjct: 181 SNHHHHHHHHPMFNGSYTNSNTWVPQQLPATTQKHPCLSAAIGNEDVG---PENGISFLS 240

Query: 241 WRLNVANTDHRPTLVHDFTR 251
           WRLNVANTDHRPTLVHDFTR
Sbjct: 241 WRLNVANTDHRPTLVHDFTR 255

[Close]
BLAST of Lsi07G002510 vs. NCBI nr
Match: gi|659102361|ref|XP_008452087.1| (PREDICTED: GATA transcription factor 18-like [Cucumis melo])

HSP 1 Score: 429.5 bits (1103), Expect = 4.1e-117
Identity = 226/259 (87.26%), Postives = 233/259 (89.96%), Query Frame = 1 

Query: 1   MMHHYGGGGGG----ASSFSVFLSVPNHGAADIYSSSSNY--TSSSSSSSPSSVDCTLSL 60
           MMHHYGGGGGG    ASSFS+FLSVPNHGAAD+YSSS+NY  +SSSSSSSPSSVDCTLSL
Sbjct: 1   MMHHYGGGGGGGGGGASSFSLFLSVPNHGAADMYSSSTNYASSSSSSSSSPSSVDCTLSL 60

Query: 61  GTPSTRSSEFDGDKRAAARNHHRRSAGSYVSNFCWDLLHPKHKTSARAA---APPNNITA 120
           GTPSTRSSEFD DKRAAARN HRRSAGSYVSNFCWDLLHPKHKTS R A   A  NNITA
Sbjct: 61  GTPSTRSSEFDSDKRAAARNPHRRSAGSYVSNFCWDLLHPKHKTSGRGAGGAASNNNITA 120

Query: 121 AVTTGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSTAA 180
           AV+  GDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNS+ A
Sbjct: 121 AVSNSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSSTA 180

Query: 181 ESNHHHHHHPMFNGNYTNSSTWVPHQSPATTQKHPCLSAAIGNDDVGRTEPENGISFLSW 240
           ESN  HHHH MFNG+YTNSSTWVP Q PATTQKHPCLSAAIGNDDVG   PENGISFLSW
Sbjct: 181 ESN--HHHHSMFNGSYTNSSTWVPQQLPATTQKHPCLSAAIGNDDVG---PENGISFLSW 240

Query: 241 RLNVANTDHRPTLVHDFTR 251
           RLNVANTDHRPTLVHDFTR
Sbjct: 241 RLNVANTDHRPTLVHDFTR 254

[Close]
BLAST of Lsi07G002510 vs. NCBI nr
Match: gi|147792212|emb|CAN72981.1| (hypothetical protein VITISV_009032 [Vitis vinifera])

HSP 1 Score: 211.5 bits (537), Expect = 1.7e-51
Identity = 136/251 (54.18%), Postives = 164/251 (65.34%), Query Frame = 1 

Query: 12  ASSFSVFLSVPNHGAADIYSSSSNYTSSSSSSSPSSVDCTLSLGTPSTRSSEFDGDKRAA 71
           ++SFS+  S+PNH   D    +  Y  +SSSSS  SVDCTLSLGTPSTR +  D D++  
Sbjct: 99  SNSFSMLFSMPNHKPFD---ETDMYPFTSSSSS--SVDCTLSLGTPSTRLT--DNDEK-- 158

Query: 72  ARNHHRRSAGSYVSNFCWDLLHPKHKTSARAAAPP---NNITAAVTTGGDPLLARRCANC 131
            R HH R AGS VSNFCWD+L  KH  SA    P    ++ +++  + GDPLLARRCANC
Sbjct: 159 -RMHHDRRAGSCVSNFCWDILQXKHTPSAPTHKPSRGGSSGSSSNNSAGDPLLARRCANC 218

Query: 132 DTTSTPLWRNGPRGPKSLCNACGIRFKKEERR--AAAATVNSTAAESNHHH---HHHPMF 191
           DTTSTPLWRNGPRGPKSLCNACGIRFKKEERR  AAAAT  +TA      H    HH   
Sbjct: 219 DTTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAAAATTGATAGVMEPQHIMISHH--- 278

Query: 192 NGNYTNSSTWVPHQSPATTQKHPCLSAAIGND----DVGRTEPENGISFLSWRLNVANTD 251
                 +++WV H   + TQK PCLS A+GN+    +    + + GI FLSWRLNV +  
Sbjct: 279 ------NNSWVHH---SQTQKMPCLSPAMGNEFRFIEDDDRDSDTGIPFLSWRLNVTD-- 324

[Close]
BLAST of Lsi07G002510 vs. NCBI nr
Match: gi|731387122|ref|XP_010649139.1| (PREDICTED: GATA transcription factor 18-like [Vitis vinifera])

HSP 1 Score: 211.5 bits (537), Expect = 1.7e-51
Identity = 136/251 (54.18%), Postives = 164/251 (65.34%), Query Frame = 1 

Query: 12  ASSFSVFLSVPNHGAADIYSSSSNYTSSSSSSSPSSVDCTLSLGTPSTRSSEFDGDKRAA 71
           ++SFS+  S+PNH   D    +  Y  +SSSSS  SVDCTLSLGTPSTR +  D D++  
Sbjct: 24  SNSFSMLFSMPNHKPFD---ETDMYPFTSSSSS--SVDCTLSLGTPSTRLT--DNDEK-- 83

Query: 72  ARNHHRRSAGSYVSNFCWDLLHPKHKTSARAAAPP---NNITAAVTTGGDPLLARRCANC 131
            R HH R AGS VSNFCWD+L  KH  SA    P    ++ +++  + GDPLLARRCANC
Sbjct: 84  -RMHHDRRAGSCVSNFCWDILQSKHTPSAPTHKPSRGGSSGSSSNNSAGDPLLARRCANC 143

Query: 132 DTTSTPLWRNGPRGPKSLCNACGIRFKKEERR--AAAATVNSTAAESNHHH---HHHPMF 191
           DTTSTPLWRNGPRGPKSLCNACGIRFKKEERR  AAAAT  +TA      H    HH   
Sbjct: 144 DTTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAAAATTGATAGVMEPQHIMISHH--- 203

Query: 192 NGNYTNSSTWVPHQSPATTQKHPCLSAAIGND----DVGRTEPENGISFLSWRLNVANTD 251
                 +++WV H   + TQK PCLS A+GN+    +    + + GI FLSWRLNV +  
Sbjct: 204 ------NNSWVHH---SQTQKMPCLSPAMGNEFRFIEDDDRDSDTGIPFLSWRLNVTD-- 249

[Close]
BLAST of Lsi07G002510 vs. NCBI nr
Match: gi|694392234|ref|XP_009371601.1| (PREDICTED: GATA transcription factor 18-like [Pyrus x bretschneideri])

HSP 1 Score: 206.1 bits (523), Expect = 7.3e-50
Identity = 136/260 (52.31%), Postives = 159/260 (61.15%), Query Frame = 1 

Query: 13  SSFSVFLSVPNHGAADIY----SSSSNYTSSSSSSSPSSVDCTLSLGTPSTRSSEFD--- 72
           SSFS+  S+PNH     +    +S  ++     +S  SSVDCTLSLGTPSTR ++ D   
Sbjct: 31  SSFSMLFSMPNHHKPYDHIHHETSYDHHHMYPFASPSSSVDCTLSLGTPSTRLTDNDVVS 90

Query: 73  GDKRAAARNHHRRSAGSYVSNFCWDLLHPK-------HKTSARAAAPPNNITAAVTTGGD 132
            D+RA  RN  RRS G+ VSNFCWDLL P        HK  +R     N +T AV++  D
Sbjct: 91  DDRRA--RNGERRS-GNCVSNFCWDLLQPNKSSPSSHHKNGSRGGNI-NGVTNAVSSNND 150

Query: 133 PLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNS-----TAAES 192
           PLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA AAT N         ES
Sbjct: 151 PLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAATANGGGSSVVGMES 210

Query: 193 NHHHHHHPMFNGNYTNSSTWVPHQSPATTQKHPCLS---AAIGNDDVGRTEPENGISFLS 251
           N +HHH           ++W+PH   + TQK  C       I +D V      NGI FLS
Sbjct: 211 NGYHHH-----------NSWIPH---SQTQKMACFGNEFRFIEDDTVHHENDMNGIPFLS 269

The following BLAST results are available for this feature:
BLAST of Lsi07G002510 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GAT18_ARATH3.6e-4143.24GATA transcription factor 18 OS=Arabidopsis thaliana GN=GATA18 PE=2 SV=2[more]
GAT19_ARATH1.1e-3243.02GATA transcription factor 19 OS=Arabidopsis thaliana GN=GATA19 PE=2 SV=2[more]
GAT20_ARATH1.1e-2439.33GATA transcription factor 20 OS=Arabidopsis thaliana GN=GATA20 PE=2 SV=2[more]
GAT22_ARATH7.9e-1268.75Putative GATA transcription factor 22 OS=Arabidopsis thaliana GN=GATA22 PE=3 SV=... [more]
GAT21_ARATH6.7e-1171.43GATA transcription factor 21 OS=Arabidopsis thaliana GN=GATA21 PE=1 SV=2[more]
BLAST of Lsi07G002510 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KY15_CUCSA1.1e-11887.31Uncharacterized protein OS=Cucumis sativus GN=Csa_4G046650 PE=4 SV=1[more]
A5C2I6_VITVI1.2e-5154.18Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009032 PE=4 SV=1[more]
A0A068U107_COFCA1.5e-4951.18Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00037224001 PE=4 SV=1[more]
M5VSX0_PRUPE2.5e-4950.00Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014930mg PE=4 SV=1[more]
V4RVT5_9ROSI9.6e-4953.57Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026328mg PE=4 SV=1[more]
BLAST of Lsi07G002510 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G50870.12.0e-4243.24 GATA type zinc finger transcription factor family protein[more]
AT4G36620.16.0e-3443.02 GATA transcription factor 19[more]
AT2G18380.16.0e-2639.33 GATA transcription factor 20[more]
AT4G26150.14.4e-1368.75 cytokinin-responsive gata factor 1[more]
AT5G56860.13.8e-1271.43 GATA type zinc finger transcription factor family protein[more]
BLAST of Lsi07G002510 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778690730|ref|XP_004146553.2|1.6e-11887.31PREDICTED: GATA transcription factor 18-like [Cucumis sativus][more]
gi|659102361|ref|XP_008452087.1|4.1e-11787.26PREDICTED: GATA transcription factor 18-like [Cucumis melo][more]
gi|147792212|emb|CAN72981.1|1.7e-5154.18hypothetical protein VITISV_009032 [Vitis vinifera][more]
gi|731387122|ref|XP_010649139.1|1.7e-5154.18PREDICTED: GATA transcription factor 18-like [Vitis vinifera][more]
gi|694392234|ref|XP_009371601.1|7.3e-5052.31PREDICTED: GATA transcription factor 18-like [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
GO:0008270zinc ion binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR013088Znf_NHR/GATA
IPR000679Znf_GATA
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi07G002510.1Lsi07G002510.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000679Zinc finger, GATA-typePFAMPF00320GATAcoord: 125..159
score: 5.7
IPR000679Zinc finger, GATA-typeSMARTSM00401GATA_3coord: 119..174
score: 5.4
IPR000679Zinc finger, GATA-typePROSITEPS00344GATA_ZN_FINGER_1coord: 125..150
scor
IPR000679Zinc finger, GATA-typePROFILEPS50114GATA_ZN_FINGER_2coord: 119..155
score: 1
IPR013088Zinc finger, NHR/GATA-typeGENE3DG3DSA:3.30.50.10coord: 123..159
score: 3.8
NoneNo IPR availablePANTHERPTHR10071TRANSCRIPTION FACTOR GATA GATA BINDING FACTORcoord: 12..172
score: 5.6
NoneNo IPR availablePANTHERPTHR10071:SF156GATA TRANSCRIPTION FACTOR 18-RELATEDcoord: 12..172
score: 5.6
NoneNo IPR availableunknownSSF57716Glucocorticoid receptor-like (DNA-binding domain)coord: 122..168
score: 9.03

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi07G002510Csa4G046650Cucumber (Chinese Long) v2culsiB303
Lsi07G002510CSPI04G05430Wild cucumber (PI 183967)cpilsiB303
Lsi07G002510Cucsa.106490Cucumber (Gy14) v1cgylsiB140
Lsi07G002510CmaCh04G007570Cucurbita maxima (Rimu)cmalsiB698
Lsi07G002510CmoCh04G008070Cucurbita moschata (Rifu)cmolsiB692
Lsi07G002510Cla014581Watermelon (97103) v1lsiwmB439
Lsi07G002510MELO3C016391Melon (DHL92) v3.5.1lsimeB454
Lsi07G002510ClCG07G008580Watermelon (Charleston Gray)lsiwcgB413
Lsi07G002510MELO3C016391.2Melon (DHL92) v3.6.1lsimedB471
Lsi07G002510Cla97C07G135600Watermelon (97103) v2lsiwmbB412
Lsi07G002510Bhi01G001824Wax gourdlsiwgoB550
Lsi07G002510Cp4.1LG01g07010Cucurbita pepo (Zucchini)cpelsiB373
Lsi07G002510CsGy4G005320Cucumber (Gy14) v2cgyblsiB277
Lsi07G002510Carg14155Silver-seed gourdcarlsiB859
Lsi07G002510CsaV3_4G005580Cucumber (Chinese Long) v3cuclsiB322
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi07G002510Silver-seed gourdcarlsiB369
Lsi07G002510Silver-seed gourdcarlsiB935
Lsi07G002510Cucumber (Chinese Long) v3cuclsiB151
Lsi07G002510Cucumber (Chinese Long) v3cuclsiB257
Lsi07G002510Cucumber (Chinese Long) v3cuclsiB499
Lsi07G002510Watermelon (97103) v2lsiwmbB393
Lsi07G002510Wax gourdlsiwgoB555
Lsi07G002510Bottle gourd (USVL1VR-Ls)lsilsiB082
Lsi07G002510Bottle gourd (USVL1VR-Ls)lsilsiB144
Lsi07G002510Cucumber (Gy14) v1cgylsiB557
Lsi07G002510Cucurbita maxima (Rimu)cmalsiB326
Lsi07G002510Cucurbita maxima (Rimu)cmalsiB618
Lsi07G002510Cucurbita maxima (Rimu)cmalsiB806
Lsi07G002510Cucurbita moschata (Rifu)cmolsiB315
Lsi07G002510Cucurbita moschata (Rifu)cmolsiB606
Lsi07G002510Cucurbita moschata (Rifu)cmolsiB792
Lsi07G002510Cucurbita pepo (Zucchini)cpelsiB185
Lsi07G002510Wild cucumber (PI 183967)cpilsiB236
Lsi07G002510Wild cucumber (PI 183967)cpilsiB477
Lsi07G002510Cucumber (Chinese Long) v2culsiB237
Lsi07G002510Cucumber (Chinese Long) v2culsiB469
Lsi07G002510Melon (DHL92) v3.5.1lsimeB437
Lsi07G002510Melon (DHL92) v3.5.1lsimeB460
Lsi07G002510Watermelon (Charleston Gray)lsiwcgB396
Lsi07G002510Watermelon (Charleston Gray)lsiwcgB402
Lsi07G002510Watermelon (97103) v1lsiwmB451
Lsi07G002510Watermelon (97103) v1lsiwmB455
Lsi07G002510Cucumber (Gy14) v2cgyblsiB435
Lsi07G002510Melon (DHL92) v3.6.1lsimedB448
Lsi07G002510Melon (DHL92) v3.6.1lsimedB478