Carg14155 (gene) Silver-seed gourd

Overview
NameCarg14155
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionGATA transcription factor
LocationCucurbita_argyrosperma_scaffold_045 : 297639 .. 298749 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGCACCACTGCGGCGCCGGCGCCGGCGGAGCTGCCTCTTCATTTTCCGTCTTTTTGTCGGTGCCCAACCACGGTGGCGCTGCCCATGACATGATGGACATCTACTCTAATAATTATGCCTCCTCCTCCTCCTCTTCTTCTTCTCCTTCATCCGTTGATTGTACTCTCTCTCTTGGTACTCCCTCTACGCGATCGTCGGAGTTCGATTCCGACAAACGCGCCGCCCCCCGCCATCACCGCCGCTCCGCCGGTTCTTATGTCTCTAACTTCTGTTGGGATTTGTTGCATCCTAAACACAAGAGTGCTGGCCGTTCCACGGCGAGTAATGCCGCCGCTGTCCCTTCCGGTGGCGATCCGCTCCTCGCTCGGCGGTGCGCTAACTGCGATACCACTTCTACTCCGCTTTGGAGAAATGGGCCGAGAGGGCCTAAGGTAAATCAAGTGATTTCAAATTATGGAAATTATTTTCATTTTCTTTTTTGTTTTTTAAATGTAAATTATTTTTTTAAAGTTCTAACAATTGTTTATAATAGAGATTCTATTCTGATTTTAGTAATTTGTTGGAGTTCTGTTTAAGTTACCGATGCTTATATTATTTAGAATAATTTTATTGGTTAAAACGTTATAATTTTAATTAAAAATTACTATAAATTTGAATTAAAGAAGAATTGAGATAGACTAAATTCAATGTAATTATTTTTTTATTGTAACAATAAAATTTGAATTTATTTATTTAATTGAAATGCAGTCCCTATGCAATGCGTGTGGGATTCGTTTCAAGAAGGAAGAGCGGAGGGCGGCGGCGACGGTGAACTGCACGGCTACCGCAATGGCGGCGGAATCTAACAACCACCATCACCTCCACCAACACCACCAGATGTTCAACGGAAACTACACGAATTCAACCGCTACGTGGGTTCCACACCACTCGCCAGTGGCAACCCAGAAACTCCCGTGCCTGTCGGCGGCGGCTATTAACAACGAATCAATGTTTATAGGAAACGACGACGTTCGAAGAACTGAACAAGAAAACGGCATCTCGTATCTCTCTTGGCGCCTCAACGTTACCGATCACCGGCCCAGCCTCGTCCATGACTTCACAAGATGA

mRNA sequence

ATGATGCACCACTGCGGCGCCGGCGCCGGCGGAGCTGCCTCTTCATTTTCCGTCTTTTTGTCGGTGCCCAACCACGGTGGCGCTGCCCATGACATGATGGACATCTACTCTAATAATTATGCCTCCTCCTCCTCCTCTTCTTCTTCTCCTTCATCCGTTGATTGTACTCTCTCTCTTGGTACTCCCTCTACGCGATCGTCGGAGTTCGATTCCGACAAACGCGCCGCCCCCCGCCATCACCGCCGCTCCGCCGGTTCTTATGTCTCTAACTTCTGTTGGGATTTGTTGCATCCTAAACACAAGAGTGCTGGCCGTTCCACGGCGAGTAATGCCGCCGCTGTCCCTTCCGGTGGCGATCCGCTCCTCGCTCGGCGGTGCGCTAACTGCGATACCACTTCTACTCCGCTTTGGAGAAATGGGCCGAGAGGGCCTAAGTCCCTATGCAATGCGTGTGGGATTCGTTTCAAGAAGGAAGAGCGGAGGGCGGCGGCGACGGTGAACTGCACGGCTACCGCAATGGCGGCGGAATCTAACAACCACCATCACCTCCACCAACACCACCAGATGTTCAACGGAAACTACACGAATTCAACCGCTACGTGGGTTCCACACCACTCGCCAGTGGCAACCCAGAAACTCCCGTGCCTGTCGGCGGCGGCTATTAACAACGAATCAATGTTTATAGGAAACGACGACGTTCGAAGAACTGAACAAGAAAACGGCATCTCGTATCTCTCTTGGCGCCTCAACGTTACCGATCACCGGCCCAGCCTCGTCCATGACTTCACAAGATGA

Coding sequence (CDS)

ATGATGCACCACTGCGGCGCCGGCGCCGGCGGAGCTGCCTCTTCATTTTCCGTCTTTTTGTCGGTGCCCAACCACGGTGGCGCTGCCCATGACATGATGGACATCTACTCTAATAATTATGCCTCCTCCTCCTCCTCTTCTTCTTCTCCTTCATCCGTTGATTGTACTCTCTCTCTTGGTACTCCCTCTACGCGATCGTCGGAGTTCGATTCCGACAAACGCGCCGCCCCCCGCCATCACCGCCGCTCCGCCGGTTCTTATGTCTCTAACTTCTGTTGGGATTTGTTGCATCCTAAACACAAGAGTGCTGGCCGTTCCACGGCGAGTAATGCCGCCGCTGTCCCTTCCGGTGGCGATCCGCTCCTCGCTCGGCGGTGCGCTAACTGCGATACCACTTCTACTCCGCTTTGGAGAAATGGGCCGAGAGGGCCTAAGTCCCTATGCAATGCGTGTGGGATTCGTTTCAAGAAGGAAGAGCGGAGGGCGGCGGCGACGGTGAACTGCACGGCTACCGCAATGGCGGCGGAATCTAACAACCACCATCACCTCCACCAACACCACCAGATGTTCAACGGAAACTACACGAATTCAACCGCTACGTGGGTTCCACACCACTCGCCAGTGGCAACCCAGAAACTCCCGTGCCTGTCGGCGGCGGCTATTAACAACGAATCAATGTTTATAGGAAACGACGACGTTCGAAGAACTGAACAAGAAAACGGCATCTCGTATCTCTCTTGGCGCCTCAACGTTACCGATCACCGGCCCAGCCTCGTCCATGACTTCACAAGATGA

Protein sequence

MMHHCGAGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATAMAAESNNHHHLHQHHQMFNGNYTNSTATWVPHHSPVATQKLPCLSAAAINNESMFIGNDDVRRTEQENGISYLSWRLNVTDHRPSLVHDFTR
Homology
[Close]
BLAST of Carg14155 vs. NCBI nr
Match: XP_023533953.1 (GATA transcription factor 19-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 426.4 bits (1095), Expect = 7.1e-116
Identity = 258/264 (97.73%), Postives = 258/264 (97.73%), Query Frame = 0 

Query: 1   MMHHCGAGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNXXXXXXXXXXXXXXVDCTLSLG 60
           MMHHCG GAGGAASSFSVFLSVPNHGGAAHDMMDIYSN XXXXXXXXXXXX VDCTLSLG
Sbjct: 1   MMHHCG-GAGGAASSFSVFLSVPNHGGAAHDMMDIYSN-XXXXXXXXXXXXSVDCTLSLG 60

Query: 61  TPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSGGDP 120
           TPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPS GDP
Sbjct: 61  TPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSSGDP 120

Query: 121 LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKXXXXXXXXXXXXXXXXXXXXXXX 180
           LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFK XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXMFNGNYTNSTATWVPHHSPVATQKLPCLSAAAINNESMFIGNDDVRRTEQEN 240
           XXXXXXXX FNGNYTNSTATWVPHHSPVATQKLPCLSAAAINNESMFIGNDDVRRTEQEN
Sbjct: 181 XXXXXXXXXFNGNYTNSTATWVPHHSPVATQKLPCLSAAAINNESMFIGNDDVRRTEQEN 240

Query: 241 GISYLSWRLNVTDHRPSLVHDFTR 265
           GISYLSWRLNVTDHRPSLVHDFTR
Sbjct: 241 GISYLSWRLNVTDHRPSLVHDFTR 262

[Close]
BLAST of Carg14155 vs. NCBI nr
Match: XP_022982306.1 (GATA transcription factor 19-like [Cucurbita maxima])

HSP 1 Score: 409.1 bits (1050), Expect = 1.2e-110
Identity = 254/266 (95.49%), Postives = 257/266 (96.62%), Query Frame = 0 

Query: 1   MMHHCGAGAGGAASSFSVFLSVPNHGGAAHDMMDIY-SNXXXXXXXXXXXXXXVDCTLSL 60
           MMHHCG GAGGAASSFSVFLSVPNHGGAAHDMMDIY   XXXXXXXXXXXXXXVDCTLSL
Sbjct: 1   MMHHCG-GAGGAASSFSVFLSVPNHGGAAHDMMDIYXXXXXXXXXXXXXXXXXVDCTLSL 60

Query: 61  GTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSGGD 120
           GTPSTRSSEFDSDKRAAPRHHR SAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSGGD
Sbjct: 61  GTPSTRSSEFDSDKRAAPRHHRHSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSGGD 120

Query: 121 PLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKXXXXXXXXXXXXXXXXXXXXXX 180
           PLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFK XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 PLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXMFNGNYTNSTATWVPHHSPVATQKLPCLS-AAAINNESMFIGNDDVRRTEQ 240
           XXXXXXXXX  +GNYTNS+ATWVPHHSPVATQKLPCLS AAAI+NESMFIGNDDVRRTEQ
Sbjct: 181 XXXXXXXXXXXSGNYTNSSATWVPHHSPVATQKLPCLSAAAAISNESMFIGNDDVRRTEQ 240

Query: 241 ENGISYLSWRLNVTDHRPSLVHDFTR 265
           ENGISYLSWRLNVTDHRPSLVHDFTR
Sbjct: 241 ENGISYLSWRLNVTDHRPSLVHDFTR 265

[Close]
BLAST of Carg14155 vs. NCBI nr
Match: XP_022942846.1 (GATA transcription factor 19-like [Cucurbita moschata])

HSP 1 Score: 368.2 bits (944), Expect = 2.3e-98
Identity = 210/212 (99.06%), Postives = 210/212 (99.06%), Query Frame = 0 

Query: 53  VDCTLSLGTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAA 112
           VDCTLSLGTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAA
Sbjct: 54  VDCTLSLGTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAA 113

Query: 113 AVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKXXXXXXXXXXXXXXX 172
           AVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKXXXXXXXXXXXXXXX
Sbjct: 114 AVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKXXXXXXXXXXXXXXX 173

Query: 173 XXXXXXXXXXXXXXXXMFNGNYTNSTATWVPHHSPVATQKLPCLSAAAINNESMFIGNDD 232
           XXXXXXXXXXXXXXXX FNGNYTNSTA WVPHHSPVATQKLPCLSAAAINNESMFIGNDD
Sbjct: 174 XXXXXXXXXXXXXXXXXFNGNYTNSTAAWVPHHSPVATQKLPCLSAAAINNESMFIGNDD 233

Query: 233 VRRTEQENGISYLSWRLNVTDHRPSLVHDFTR 265
           VRRTEQENGISYLSWRLNVTDHRPSLVHDFTR
Sbjct: 234 VRRTEQENGISYLSWRLNVTDHRPSLVHDFTR 265

[Close]
BLAST of Carg14155 vs. NCBI nr
Match: XP_008452087.1 (PREDICTED: GATA transcription factor 18-like [Cucumis melo])

HSP 1 Score: 255.4 bits (651), Expect = 2.2e-64
Identity = 168/221 (76.02%), Postives = 176/221 (79.64%), Query Frame = 0 

Query: 53  VDCTLSLGTPSTRSSEFDSDKRAAPRH-HRRSAGSYVSNFCWDLLHPKHKSAGR---STA 112
           VDCTLSLGTPSTRSSEFDSDKRAA R+ HRRSAGSYVSNFCWDLLHPKHK++GR     A
Sbjct: 54  VDCTLSLGTPSTRSSEFDSDKRAAARNPHRRSAGSYVSNFCWDLLHPKHKTSGRGAGGAA 113

Query: 113 SN---AAAVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKXXXXXXXX 172
           SN    AAV + GDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFK        X
Sbjct: 114 SNNNITAAVSNSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFK--------X 173

Query: 173 XXXXXXXXXXXXXXXXXXXXXXXMFNGNYTNSTATWVPHHSPVATQKLPCLSAAAINNES 232
           XXXXXXXXXXXXXXXXXXXXXXX  NG+YTNS +TWVP   P  TQK PCLSAA      
Sbjct: 174 XXXXXXXXXXXXXXXXXXXXXXXXXNGSYTNS-STWVPQQLPATTQKHPCLSAA------ 233

Query: 233 MFIGNDDVRRTEQENGISYLSWRLNV--TDHRPSLVHDFTR 265
             IGNDDV     ENGIS+LSWRLNV  TDHRP+LVHDFTR
Sbjct: 234 --IGNDDV---GPENGISFLSWRLNVANTDHRPTLVHDFTR 254

[Close]
BLAST of Carg14155 vs. NCBI nr
Match: XP_004146553.2 (PREDICTED: GATA transcription factor 18-like [Cucumis sativus] >KGN53302.1 hypothetical protein Csa_4G046650 [Cucumis sativus])

HSP 1 Score: 221.5 bits (563), Expect = 3.4e-54
Identity = 177/260 (68.08%), Postives = 184/260 (70.77%), Query Frame = 0 

Query: 18  VFLSVPNHGGAAHDMMDIYSNXXXXXXXXXXXXXXVDCTLSLGTPSTRSSEFDSDK---- 77
           VFLSVPNHG A     D+YS XXXXXXXXXXXX  VDCTLSLGTPSTRSSEFD DK    
Sbjct: 18  VFLSVPNHGAA-----DMYS-XXXXXXXXXXXXSSVDCTLSLGTPSTRSSEFDGDKXXXX 77

Query: 78  RAAPRHHRRSAGSYVSNFCWDLLHPKHKSA-------GRSTASNAAAVPSGGDPLLARRC 137
                       SYVSNFCWDLLHPKHK++                       PLLARRC
Sbjct: 78  XXXXXXXXXXXXSYVSNFCWDLLHPKHKTSXXXXXXXXXXXXXXXXXXXXXXXPLLARRC 137

Query: 138 ANCDTTSTPLWRNGPRGPKSLCNACGIRFKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 197
           ANCDTTSTPLWRNGPRGPKSLCNACGIRFK    XXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 138 ANCDTTSTPLWRNGPRGPKSLCNACGIRFK----XXXXXXXXXXXXXXXXXXXXXXXXXX 197

Query: 198 XXMFNGNYTNSTATWVPHHSPVATQKLPCLSAAAINNESMFIGNDDVRRTEQENGISYLS 257
           XXMFNG+YTNS  TWVP   P  TQK PCLSAA        IGN+DV     ENGIS+LS
Sbjct: 198 XXMFNGSYTNSN-TWVPQQLPATTQKHPCLSAA--------IGNEDV---GPENGISFLS 255

Query: 258 WRLNV--TDHRPSLVHDFTR 265
           WRLNV  TDHRP+LVHDFTR
Sbjct: 258 WRLNVANTDHRPTLVHDFTR 255

[Close]
BLAST of Carg14155 vs. TAIR10
Match: AT4G36620.1 (GATA transcription factor 19)

HSP 1 Score: 110.9 bits (276), Expect = 1.2e-24
Identity = 112/212 (52.83%), Postives = 123/212 (58.02%), Query Frame = 0 

Query: 53  VDCTLSLGTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAA 112
           VDCTLSLGTPSTR    D D+R    H   + G       WD L+            +  
Sbjct: 23  VDCTLSLGTPSTRLCNED-DERRFSSHTSDTIG-------WDFLN-----------GSXX 82

Query: 113 AVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKXXXXXXXXXXXXXXX 172
                      RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFK XXXXXXXXXXXXXXX
Sbjct: 83  XXXXXXXXXXXRRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKXXXXXXXXXXXXXXXX 142

Query: 173 XXXXXXXXXXXXXXXXMFNGNYTNSTATWVPHHSPVATQKLPCLSAAAINNESMFIGNDD 232
           XXXXXXXXXXXXXXXX                     TQ++P  S A  NNE  ++  DD
Sbjct: 143 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQRVPYYSPA--NNEYSYV--DD 202

Query: 233 VRRTEQE-NGISYLSWRLNVTDHRPSLVHDFT 264
           VR  + +     +LSWRLNV D R  LVHDFT
Sbjct: 203 VRVVDHDVTTDPFLSWRLNVAD-RTGLVHDFT 210

[Close]
BLAST of Carg14155 vs. TAIR10
Match: AT3G50870.1 (GATA type zinc finger transcription factor family protein)

HSP 1 Score: 110.5 bits (275), Expect = 1.6e-24
Identity = 116/237 (48.95%), Postives = 132/237 (55.70%), Query Frame = 0 

Query: 53  VDCTLSLGTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASN-- 112
           VDCTLSLGTPSTR  E                   +SNF WDL+H K+ ++  +  +N  
Sbjct: 67  VDCTLSLGTPSTRLCEXXXXXXXXXXXXXXXC---ISNF-WDLIHTKNNNSKTAPYNNVP 126

Query: 113 --AAAVPSGG--------------DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIR 172
             +A  PS G                     CANCDTTSTPLWRNGPRGPKSLCNACGIR
Sbjct: 127 SFSANKPSRGCXXXXXXXXXXXXXXXXXXXXCANCDTTSTPLWRNGPRGPKSLCNACGIR 186

Query: 173 FK-KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMFNGNYTNSTATWVPHHSPVATQKL 232
           FK  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                     TQ++
Sbjct: 187 FKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQRV 246

Query: 233 PCLSAAAINNESMFIGN------DDVRRTEQENGISYLSWRLNVTDHRPSLVHDFTR 265
           PC   A   NE  F+ +      ++V       G+ +LSWRLNV D R SLVHDFTR
Sbjct: 247 PCNYPA---NEIRFMDDYGSGVANNVESDGAHGGVPFLSWRLNVAD-RASLVHDFTR 295

[Close]
BLAST of Carg14155 vs. TAIR10
Match: AT2G18380.1 (GATA transcription factor 20)

HSP 1 Score: 97.1 bits (240), Expect = 1.8e-20
Identity = 65/145 (44.83%), Postives = 78/145 (53.79%), Query Frame = 0 

Query: 14  SSFSVFLSVPNHGGAAHDMMDIYSNXXXXXXXXXXXXXXVDCTLSLGTPSTRSSEFDSDK 73
           S+FS+F S  N     H+  D Y+N              VDCTLSLGTPSTR  +     
Sbjct: 8   SNFSMFFSSENDDQNHHN-YDPYNN--------FSSSTSVDCTLSLGTPSTRLDD----- 67

Query: 74  RAAPRHHRRSAGSYVSNFCWDL-LHPKHKSAGRSTASNAAAVPSGGDPLLARRCANCDTT 133
                HHR S+ +  +N   D  +H          A  ++    G    L RRCA+CDTT
Sbjct: 68  -----HHRFSSAN-SNNISGDFYIH-------GGNAKTSSYKKGGVAHSLPRRCASCDTT 125

Query: 134 STPLWRNGPRGPKSLCNACGIRFKK 158
           STPLWRNGP+GPKSLCNACGIRFKK
Sbjct: 128 STPLWRNGPKGPKSLCNACGIRFKK 125

[Close]
BLAST of Carg14155 vs. TAIR10
Match: AT4G26150.1 (cytokinin-responsive gata factor 1)

HSP 1 Score: 65.1 bits (157), Expect = 7.5e-11
Identity = 26/34 (76.47%), Postives = 31/34 (91.18%), Query Frame = 0 

Query: 124 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKK 158
           R C++C+TT TPLWR+GPRGPKSLCNACGIR +K
Sbjct: 199 RICSDCNTTKTPLWRSGPRGPKSLCNACGIRQRK 232

[Close]
BLAST of Carg14155 vs. TAIR10
Match: AT1G08010.1 (GATA transcription factor 11)

HSP 1 Score: 63.5 bits (153), Expect = 2.2e-10
Identity = 27/52 (51.92%), Postives = 36/52 (69.23%), Query Frame = 0 

Query: 105 RSTASNAAAVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFK 157
           R+ +S   A  S G   + R+C +C+TT TP WR GP GPK+LCNACG+RF+
Sbjct: 204 RTVSSTLEASNSDG---IVRKCTHCETTKTPQWREGPSGPKTLCNACGVRFR 252

[Close]
BLAST of Carg14155 vs. Swiss-Prot
Match: sp|Q6QPM2|GAT19_ARATH (GATA transcription factor 19 OS=Arabidopsis thaliana OX=3702 GN=GATA19 PE=1 SV=2)

HSP 1 Score: 110.9 bits (276), Expect = 2.1e-23
Identity = 112/212 (52.83%), Postives = 123/212 (58.02%), Query Frame = 0 

Query: 53  VDCTLSLGTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAA 112
           VDCTLSLGTPSTR    D D+R    H   + G       WD L+            +  
Sbjct: 23  VDCTLSLGTPSTRLCNED-DERRFSSHTSDTIG-------WDFLN-----------GSXX 82

Query: 113 AVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKXXXXXXXXXXXXXXX 172
                      RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFK XXXXXXXXXXXXXXX
Sbjct: 83  XXXXXXXXXXXRRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKXXXXXXXXXXXXXXXX 142

Query: 173 XXXXXXXXXXXXXXXXMFNGNYTNSTATWVPHHSPVATQKLPCLSAAAINNESMFIGNDD 232
           XXXXXXXXXXXXXXXX                     TQ++P  S A  NNE  ++  DD
Sbjct: 143 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQRVPYYSPA--NNEYSYV--DD 202

Query: 233 VRRTEQE-NGISYLSWRLNVTDHRPSLVHDFT 264
           VR  + +     +LSWRLNV D R  LVHDFT
Sbjct: 203 VRVVDHDVTTDPFLSWRLNVAD-RTGLVHDFT 210

[Close]
BLAST of Carg14155 vs. Swiss-Prot
Match: sp|Q8LC79|GAT18_ARATH (GATA transcription factor 18 OS=Arabidopsis thaliana OX=3702 GN=GATA18 PE=1 SV=2)

HSP 1 Score: 110.5 bits (275), Expect = 2.8e-23
Identity = 116/237 (48.95%), Postives = 132/237 (55.70%), Query Frame = 0 

Query: 53  VDCTLSLGTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASN-- 112
           VDCTLSLGTPSTR  E                   +SNF WDL+H K+ ++  +  +N  
Sbjct: 67  VDCTLSLGTPSTRLCEXXXXXXXXXXXXXXXC---ISNF-WDLIHTKNNNSKTAPYNNVP 126

Query: 113 --AAAVPSGG--------------DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIR 172
             +A  PS G                     CANCDTTSTPLWRNGPRGPKSLCNACGIR
Sbjct: 127 SFSANKPSRGCXXXXXXXXXXXXXXXXXXXXCANCDTTSTPLWRNGPRGPKSLCNACGIR 186

Query: 173 FK-KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMFNGNYTNSTATWVPHHSPVATQKL 232
           FK  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                     TQ++
Sbjct: 187 FKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQRV 246

Query: 233 PCLSAAAINNESMFIGN------DDVRRTEQENGISYLSWRLNVTDHRPSLVHDFTR 265
           PC   A   NE  F+ +      ++V       G+ +LSWRLNV D R SLVHDFTR
Sbjct: 247 PCNYPA---NEIRFMDDYGSGVANNVESDGAHGGVPFLSWRLNVAD-RASLVHDFTR 295

[Close]
BLAST of Carg14155 vs. Swiss-Prot
Match: sp|B8AX51|GAT15_ORYSI (GATA transcription factor 15 OS=Oryza sativa subsp. indica OX=39946 GN=GATA15 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.9e-19
Identity = 77/161 (47.83%), Postives = 91/161 (56.52%), Query Frame = 0 

Query: 12  AASSFSVFLSVPN---------HGGAAHDMMDIYSNXXXXXXXXXXXXXXVDCTLSLGTP 71
           A+S+FS+F  + N            AA+D  D    XXXXXXXXXXXX  VDCTLSLGTP
Sbjct: 26  ASSTFSLFFPMSNGQCWPPSTVEESAAYD--DXXXXXXXXXXXXXXXXGSVDCTLSLGTP 85

Query: 72  STRSSEFDSDKRAAPRHHRRSAGSYVS----NFCWDLLHPKH---KSAGRSTASNAAAVP 131
           S+R +E  +    A  H       Y S       WD     +   +    +T +   A  
Sbjct: 86  SSRRAEPVAAAAPAANHGAPVPAHYPSLSAATVSWDATAESYYCGQQGRPATGAAKCAAG 145

Query: 132 SGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFK 157
           +G D LL RRCANC T STPLWRNGPRGPKSLCNACGIR+K
Sbjct: 146 AGHDALLDRRCANCGTASTPLWRNGPRGPKSLCNACGIRYK 184

[Close]
BLAST of Carg14155 vs. Swiss-Prot
Match: sp|Q6L5E5|GAT15_ORYSJ (GATA transcription factor 15 OS=Oryza sativa subsp. japonica OX=39947 GN=GATA15 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.9e-19
Identity = 77/161 (47.83%), Postives = 91/161 (56.52%), Query Frame = 0 

Query: 12  AASSFSVFLSVPN---------HGGAAHDMMDIYSNXXXXXXXXXXXXXXVDCTLSLGTP 71
           A+S+FS+F  + N            AA+D  D    XXXXXXXXXXXX  VDCTLSLGTP
Sbjct: 26  ASSTFSLFFPMSNGQCWPPSTVEESAAYD--DXXXXXXXXXXXXXXXXGSVDCTLSLGTP 85

Query: 72  STRSSEFDSDKRAAPRHHRRSAGSYVS----NFCWDLLHPKH---KSAGRSTASNAAAVP 131
           S+R +E  +    A  H       Y S       WD     +   +    +T +   A  
Sbjct: 86  SSRRAEPVAAAAPAANHGAPVPAHYPSLSAATVSWDATAESYYCGQQGRPATGAAKCAAG 145

Query: 132 SGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFK 157
           +G D LL RRCANC T STPLWRNGPRGPKSLCNACGIR+K
Sbjct: 146 AGHDALLDRRCANCGTASTPLWRNGPRGPKSLCNACGIRYK 184

[Close]
BLAST of Carg14155 vs. Swiss-Prot
Match: sp|Q9ZPX0|GAT20_ARATH (GATA transcription factor 20 OS=Arabidopsis thaliana OX=3702 GN=GATA20 PE=2 SV=2)

HSP 1 Score: 97.1 bits (240), Expect = 3.2e-19
Identity = 65/145 (44.83%), Postives = 78/145 (53.79%), Query Frame = 0 

Query: 14  SSFSVFLSVPNHGGAAHDMMDIYSNXXXXXXXXXXXXXXVDCTLSLGTPSTRSSEFDSDK 73
           S+FS+F S  N     H+  D Y+N              VDCTLSLGTPSTR  +     
Sbjct: 8   SNFSMFFSSENDDQNHHN-YDPYNN--------FSSSTSVDCTLSLGTPSTRLDD----- 67

Query: 74  RAAPRHHRRSAGSYVSNFCWDL-LHPKHKSAGRSTASNAAAVPSGGDPLLARRCANCDTT 133
                HHR S+ +  +N   D  +H          A  ++    G    L RRCA+CDTT
Sbjct: 68  -----HHRFSSAN-SNNISGDFYIH-------GGNAKTSSYKKGGVAHSLPRRCASCDTT 125

Query: 134 STPLWRNGPRGPKSLCNACGIRFKK 158
           STPLWRNGP+GPKSLCNACGIRFKK
Sbjct: 128 STPLWRNGPKGPKSLCNACGIRFKK 125

[Close]
BLAST of Carg14155 vs. TrEMBL
Match: tr|A0A1S3BSF9|A0A1S3BSF9_CUCME (GATA transcription factor 18-like OS=Cucumis melo OX=3656 GN=LOC103493199 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.4e-64
Identity = 168/221 (76.02%), Postives = 176/221 (79.64%), Query Frame = 0 

Query: 53  VDCTLSLGTPSTRSSEFDSDKRAAPRH-HRRSAGSYVSNFCWDLLHPKHKSAGR---STA 112
           VDCTLSLGTPSTRSSEFDSDKRAA R+ HRRSAGSYVSNFCWDLLHPKHK++GR     A
Sbjct: 54  VDCTLSLGTPSTRSSEFDSDKRAAARNPHRRSAGSYVSNFCWDLLHPKHKTSGRGAGGAA 113

Query: 113 SN---AAAVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKXXXXXXXX 172
           SN    AAV + GDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFK        X
Sbjct: 114 SNNNITAAVSNSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFK--------X 173

Query: 173 XXXXXXXXXXXXXXXXXXXXXXXMFNGNYTNSTATWVPHHSPVATQKLPCLSAAAINNES 232
           XXXXXXXXXXXXXXXXXXXXXXX  NG+YTNS +TWVP   P  TQK PCLSAA      
Sbjct: 174 XXXXXXXXXXXXXXXXXXXXXXXXXNGSYTNS-STWVPQQLPATTQKHPCLSAA------ 233

Query: 233 MFIGNDDVRRTEQENGISYLSWRLNV--TDHRPSLVHDFTR 265
             IGNDDV     ENGIS+LSWRLNV  TDHRP+LVHDFTR
Sbjct: 234 --IGNDDV---GPENGISFLSWRLNVANTDHRPTLVHDFTR 254

[Close]
BLAST of Carg14155 vs. TrEMBL
Match: tr|A0A0A0KY15|A0A0A0KY15_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G046650 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.3e-54
Identity = 177/260 (68.08%), Postives = 184/260 (70.77%), Query Frame = 0 

Query: 18  VFLSVPNHGGAAHDMMDIYSNXXXXXXXXXXXXXXVDCTLSLGTPSTRSSEFDSDK---- 77
           VFLSVPNHG A     D+YS XXXXXXXXXXXX  VDCTLSLGTPSTRSSEFD DK    
Sbjct: 18  VFLSVPNHGAA-----DMYS-XXXXXXXXXXXXSSVDCTLSLGTPSTRSSEFDGDKXXXX 77

Query: 78  RAAPRHHRRSAGSYVSNFCWDLLHPKHKSA-------GRSTASNAAAVPSGGDPLLARRC 137
                       SYVSNFCWDLLHPKHK++                       PLLARRC
Sbjct: 78  XXXXXXXXXXXXSYVSNFCWDLLHPKHKTSXXXXXXXXXXXXXXXXXXXXXXXPLLARRC 137

Query: 138 ANCDTTSTPLWRNGPRGPKSLCNACGIRFKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 197
           ANCDTTSTPLWRNGPRGPKSLCNACGIRFK    XXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 138 ANCDTTSTPLWRNGPRGPKSLCNACGIRFK----XXXXXXXXXXXXXXXXXXXXXXXXXX 197

Query: 198 XXMFNGNYTNSTATWVPHHSPVATQKLPCLSAAAINNESMFIGNDDVRRTEQENGISYLS 257
           XXMFNG+YTNS  TWVP   P  TQK PCLSAA        IGN+DV     ENGIS+LS
Sbjct: 198 XXMFNGSYTNSN-TWVPQQLPATTQKHPCLSAA--------IGNEDV---GPENGISFLS 255

Query: 258 WRLNV--TDHRPSLVHDFTR 265
           WRLNV  TDHRP+LVHDFTR
Sbjct: 258 WRLNVANTDHRPTLVHDFTR 255

[Close]
BLAST of Carg14155 vs. TrEMBL
Match: tr|A5C2I6|A5C2I6_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_009032 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 6.7e-46
Identity = 145/281 (51.60%), Postives = 164/281 (58.36%), Query Frame = 0 

Query: 2   MHHCGAGAGGAA------------SSFSVFLSVPNHGGAAHDMMDIYSNXXXXXXXXXXX 61
           MH C +  G  A            +SFS+  S+PNH     D  D+Y             
Sbjct: 76  MHRCSSSQGNMAGPCTCGLFHNQSNSFSMLFSMPNH--KPFDETDMY-------PFTSSS 135

Query: 62  XXXVDCTLSLGTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSA------ 121
              VDCTLSLGTPSTR ++ D +KR    HH R AGS VSNFCWD+L  KH  +      
Sbjct: 136 SSSVDCTLSLGTPSTRLTDND-EKR---MHHDRRAGSCVSNFCWDILQXKHTPSAPTHKP 195

Query: 122 GRSTASNAAAVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKXXXXXX 181
            R            GDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKK      
Sbjct: 196 SRGGXXXXXXXXXAGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKK------ 255

Query: 182 XXXXXXXXXXXXXXXXXXXXXXXXXMFNGNYTNSTATWVPHHSPVATQKLPCLSAAAINN 241
             XXXXXXXXXXXXXXX        +   ++ NS   WV HHS   TQK+PCLS  A+ N
Sbjct: 256 --XXXXXXXXXXXXXXXAGVMEPQHIMISHHNNS---WV-HHS--QTQKMPCLS-PAMGN 315

Query: 242 ESMFIGNDDVRRTEQENGISYLSWRLNVTDHRPSLVHDFTR 265
           E  FI +DD    + + GI +LSWRLNVTD RPSLVHDFTR
Sbjct: 316 EFRFIEDDD---RDSDTGIPFLSWRLNVTD-RPSLVHDFTR 324

[Close]
BLAST of Carg14155 vs. TrEMBL
Match: tr|A0A1S4CIH2|A0A1S4CIH2_TOBAC (GATA transcription factor 19-like OS=Nicotiana tabacum OX=4097 GN=LOC107819240 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.5e-45
Identity = 134/219 (61.19%), Postives = 147/219 (67.12%), Query Frame = 0 

Query: 53  VDCTLSLGTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPK-HKSAGRSTASNA 112
           VDCTLSLGTPSTR +   S+KR    H RRS  SY+SNFCWD+L PK H  +  S+A  +
Sbjct: 65  VDCTLSLGTPSTRLTNDISEKRVVQSHERRS--SYMSNFCWDILQPKQHTPSPPSSAHKS 124

Query: 113 AAVPSGG------DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKXXXXXXXX 172
               S G      DPL+ARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFK XXXXXXXX
Sbjct: 125 TRGGSNGSNTNSTDPLVARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKXXXXXXXXX 184

Query: 173 XXXXXXXXXXXXXXXXXXXXXXXMFNGNYTNSTATWVPHHSPVATQKLPCLSAAAINNES 232
           XXXXXXXXXXXXX                 NSTA+WV H  P    K+PC S+AA  NE 
Sbjct: 185 XXXXXXXXXXXXXD-----------TPQMINSTASWVHHSQP---PKMPCFSSAAYGNEF 244

Query: 233 MFIGNDDVRRTEQENGISYLSWRLNVTDHRPSLVHDFTR 265
            FI +DD  R     GI +L WRLNV D RPSLVHDFTR
Sbjct: 245 RFIEDDD--RDSDVTGIPFLPWRLNVAD-RPSLVHDFTR 264

[Close]
BLAST of Carg14155 vs. TrEMBL
Match: tr|K7LNF5|K7LNF5_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100790571 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.8e-43
Identity = 144/260 (55.38%), Postives = 161/260 (61.92%), Query Frame = 0 

Query: 5   CGAGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNXXXXXXXXXXXXXXVDCTLSLGTPST 64
           CG       SSF++F S+PNH    +D  D   N              VDCTLSLGTPST
Sbjct: 18  CGMFHSQTTSSFAMFFSMPNHKPPPYDDSD---NIYDYSSFTPSSSSSVDCTLSLGTPST 77

Query: 65  RSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSGGDPLLAR 124
           R SE D +KR+  RH RRS    VSNFCWDLL  KH +    + S ++   +  DPLLAR
Sbjct: 78  RFSE-DEEKRS--RHERRS----VSNFCWDLLQSKHNNP--QSHSKSSRTTNTTDPLLAR 137

Query: 125 RCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKXXXXXXXXXXXXXXXXXXXXXXXXXXX 184
           RCANCDTTSTPLWRNGPRGPKSLCNACGIRFK XXXXXXXXXXXXXXXXXXXXXX     
Sbjct: 138 RCANCDTTSTPLWRNGPRGPKSLCNACGIRFKXXXXXXXXXXXXXXXXXXXXXXXSAQV- 197

Query: 185 XXXXMFNGNYTNSTATWVPHHSPVATQKLPCLSAAAINNESMFIGNDDVRRTEQENGISY 244
                    Y NS   W  H     +QK+ C S   + NE  F+  DD  R   +NGI +
Sbjct: 198 ---------YNNS---WYAHQQ---SQKMQCFS-PGMGNEFRFV--DDADRDAADNGIPF 245

Query: 245 LSWRLNVTDHRPSLVHDFTR 265
           LSWRLNVTD R SLVHDFTR
Sbjct: 258 LSWRLNVTD-RTSLVHDFTR 245

The following BLAST results are available for this feature:
BLAST of Carg14155 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023533953.17.1e-11697.73GATA transcription factor 19-like [Cucurbita pepo subsp. pepo][more]
XP_022982306.11.2e-11095.49GATA transcription factor 19-like [Cucurbita maxima][more]
XP_022942846.12.3e-9899.06GATA transcription factor 19-like [Cucurbita moschata][more]
XP_008452087.12.2e-6476.02PREDICTED: GATA transcription factor 18-like [Cucumis melo][more]
XP_004146553.23.4e-5468.08PREDICTED: GATA transcription factor 18-like [Cucumis sativus] >KGN53302.1 hypot... [more]
BLAST of Carg14155 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G36620.11.2e-2452.83GATA transcription factor 19[more]
AT3G50870.11.6e-2448.95GATA type zinc finger transcription factor family protein[more]
AT2G18380.11.8e-2044.83GATA transcription factor 20[more]
AT4G26150.17.5e-1176.47cytokinin-responsive gata factor 1[more]
AT1G08010.12.2e-1051.92GATA transcription factor 11[more]
BLAST of Carg14155 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q6QPM2|GAT19_ARATH2.1e-2352.83GATA transcription factor 19 OS=Arabidopsis thaliana OX=3702 GN=GATA19 PE=1 SV=2[more]
sp|Q8LC79|GAT18_ARATH2.8e-2348.95GATA transcription factor 18 OS=Arabidopsis thaliana OX=3702 GN=GATA18 PE=1 SV=2[more]
sp|B8AX51|GAT15_ORYSI1.9e-1947.83GATA transcription factor 15 OS=Oryza sativa subsp. indica OX=39946 GN=GATA15 PE... [more]
sp|Q6L5E5|GAT15_ORYSJ1.9e-1947.83GATA transcription factor 15 OS=Oryza sativa subsp. japonica OX=39947 GN=GATA15 ... [more]
sp|Q9ZPX0|GAT20_ARATH3.2e-1944.83GATA transcription factor 20 OS=Arabidopsis thaliana OX=3702 GN=GATA20 PE=2 SV=2[more]
BLAST of Carg14155 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BSF9|A0A1S3BSF9_CUCME1.4e-6476.02GATA transcription factor 18-like OS=Cucumis melo OX=3656 GN=LOC103493199 PE=4 S... [more]
tr|A0A0A0KY15|A0A0A0KY15_CUCSA2.3e-5468.08Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G046650 PE=4 SV=1[more]
tr|A5C2I6|A5C2I6_VITVI6.7e-4651.60Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_009032 PE=4 SV=1[more]
tr|A0A1S4CIH2|A0A1S4CIH2_TOBAC2.5e-4561.19GATA transcription factor 19-like OS=Nicotiana tabacum OX=4097 GN=LOC107819240 P... [more]
tr|K7LNF5|K7LNF5_SOYBN1.8e-4355.38Uncharacterized protein OS=Glycine max OX=3847 GN=100790571 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0043565sequence-specific DNA binding
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR039355Transcription_factor_GATA
IPR013088Znf_NHR/GATA
IPR000679Znf_GATA
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg14155-RACarg14155-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000679Zinc finger, GATA-typeSMARTSM00401GATA_3coord: 120..172
e-value: 8.5E-19
score: 78.4
IPR000679Zinc finger, GATA-typePFAMPF00320GATAcoord: 126..160
e-value: 6.1E-18
score: 64.0
IPR000679Zinc finger, GATA-typePROSITEPS00344GATA_ZN_FINGER_1coord: 126..151
IPR000679Zinc finger, GATA-typePROSITEPS50114GATA_ZN_FINGER_2coord: 120..156
score: 13.89
IPR000679Zinc finger, GATA-typeCDDcd00202ZnF_GATAcoord: 125..157
e-value: 2.00363E-13
score: 62.005
IPR013088Zinc finger, NHR/GATA-typeGENE3DG3DSA:3.30.50.10coord: 122..167
e-value: 9.1E-14
score: 52.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..66
NoneNo IPR availablePANTHERPTHR10071:SF305SUBFAMILY NOT NAMEDcoord: 12..254
NoneNo IPR availableSUPERFAMILYSSF57716Glucocorticoid receptor-like (DNA-binding domain)coord: 123..160
IPR039355Transcription factor GATAPANTHERPTHR10071TRANSCRIPTION FACTOR GATA GATA BINDING FACTORcoord: 12..254

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg14155Cla014213Watermelon (97103) v1carwmB0942
Carg14155Cla014581Watermelon (97103) v1carwmB0940
Carg14155Csa4G046650Cucumber (Chinese Long) v2carcuB0958
Carg14155MELO3C016391Melon (DHL92) v3.5.1carmeB0924
Carg14155ClCG07G008580Watermelon (Charleston Gray)carwcgB0916
Carg14155ClCG01G019610Watermelon (Charleston Gray)carwcgB0915
Carg14155CSPI06G31020Wild cucumber (PI 183967)carcpiB0982
Carg14155CSPI04G05430Wild cucumber (PI 183967)carcpiB0981
Carg14155Cucsa.106490Cucumber (Gy14) v1carcgyB1059
Carg14155CmaCh07G004870Cucurbita maxima (Rimu)carcmaB1289
Carg14155CmaCh04G007570Cucurbita maxima (Rimu)carcmaB1288
Carg14155CmoCh04G008070Cucurbita moschata (Rifu)carcmoB1259
Carg14155Lsi07G002510Bottle gourd (USVL1VR-Ls)carlsiB859
Carg14155Cp4.1LG01g07010Cucurbita pepo (Zucchini)carcpeB1303
Carg14155Cp4.1LG10g00610Cucurbita pepo (Zucchini)carcpeB1300
Carg14155CsGy4G005320Cucumber (Gy14) v2carcgybB0931
Carg14155MELO3C016391.2Melon (DHL92) v3.6.1carmedB0930
Carg14155CsaV3_4G005580Cucumber (Chinese Long) v3carcucB0982
Carg14155Cla97C01G018990Watermelon (97103) v2carwmbB0987
Carg14155Cla97C07G135600Watermelon (97103) v2carwmbB0989
Carg14155Bhi01G001824Wax gourdcarwgoB1087
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg14155Carg16048Silver-seed gourdcarcarB602
The following block(s) are covering this gene:
GeneOrganismBlock
Carg14155Wax gourdcarwgoB1086
Carg14155Silver-seed gourdcarcarB646
Carg14155Cucurbita maxima (Rimu)carcmaB1286
Carg14155Cucurbita moschata (Rifu)carcmoB1258
Carg14155Cucurbita pepo (Zucchini)carcpeB1301
Carg14155Cucurbita pepo (Zucchini)carcpeB1302
Carg14155Cucurbita pepo (Zucchini)carcpeB1304