ClCG07G008580 (gene) Watermelon (Charleston Gray)

Overview
NameClCG07G008580
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionGATA transcription factor, putative
LocationCG_Chr07 : 22658573 .. 22660100 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGCACCACTACGGCGGCGGAGGCGGCGGCGCCTCTTCTTTTTCCATGTTCTTGTCTGTCCCCAACCACGGCGGCGCTGCCCATGACATCATGGACATGTATTCTTCTTCTTCTACTAATTACGCCTCTTCCTCTTCCTCCTCCTCTCCTTCTTCTGTTGATTGTACGCTCTCTCTCGGTACTCCCTCCACGCGCTCATCGGAATTCGATGCAGACAAACGCGCCGCCGCCCGCAATCACAACCGCCGCTCCGCTGGTTCTTATGTCTCTAACTTCTGTTGGGATTTGTTGCATCCTAAGCACAAGACTTCTGGCCGTACTGCTCCTCCTCCTCCTCCTAATAATATAACCGCCGCCGGGACTACCGGTGGCGATCCACTTCTTGCTCGGCGTTGCGCTAACTGCGATACCACTTCCACTCCGCTGTGGCGAAATGGGCCGAGAGGGCCTAAGGTAAATCACGTGTTTGTAAAATGCTCCAAATTATTTTATTATTTTTTTTTTTTTTAAAAAAATTGAACCTATTAAATAAAGATGAATCTTCATTTCAAAAATAAATCAATAATGTGATTAAGTAGTGAATTATTTTAAATAATAAATTTTTCAAAAATATTTTTATAACAAAATGTATTATTGTTTACTATTGTTTAAATAATGATATTTTACTATATTTGTAAATAAATTTACTGATTGTATTATATTTAAAAATATAGCATGCTAACTCGTAGAGTAGCTTTAAATTAATTTTCCTATTTTTAACATCACACTAAAACATATTTTCAATCTTTTAAAATTAAATGGGATAATATCCATATTGCATTGACCGAAATTAGTTTCGAAACTCTTGCATATACACTTTTAATATAATTGCATCGGTTAACGCATTGTAATCAGATATTTGAATCTTTAATTAGATTTATAATCAATGTGAACCATTTTTTCCTTTTGGAAAAGAAAGGAAAACATTATATATATATTTGAAATTTTTACTCTTTTATCTTTTAATTCCGAATATACAAATTAAAAAAATTAAAATATGAGAAAGTTCAAGATGTATGCTCAAATAATGCGCATATCATTTGAAGTTAATATTTTCAATTGAAAAGCATAAATCCGAATTATTTAAAATAATCCAAATTAAAACTTTGAGGTATTTTTAATTTAATAACACATTATTTGTTTGTGAATGAAATTTGGAGTGCAGTCGCTATGCAATGCGTGTGGGATTCGGTTCAAGAAGGAAGAGCGGAGGGCGGCAGCAGCGACGGTGAACAGCACGGCGGCAGAATCAAACCACCATCACCACCACCCAATGTTCAACGGAAACTATACAAATTCAAGTACGTGGGTCCCACACCAGTCACCGGCGATGACTCAGAAACACCATCCCTGCCTGTCGGCGGCCATAGGAAACGACGACGTTGGAAGAACCGAACCGGAAAATGGGATTTCGTTCCTGTCTTGGCGCCTTAACGTGGCTAATACCGATCACCGGTCCACCCTCGTCCATGATTTCACAAGATGA

mRNA sequence

ATGATGCACCACTACGGCGGCGGAGGCGGCGGCGCCTCTTCTTTTTCCATGTTCTTGTCTGTCCCCAACCACGGCGGCGCTGCCCATGACATCATGGACATGTATTCTTCTTCTTCTACTAATTACGCCTCTTCCTCTTCCTCCTCCTCTCCTTCTTCTGTTGATTGTACGCTCTCTCTCGGTACTCCCTCCACGCGCTCATCGGAATTCGATGCAGACAAACGCGCCGCCGCCCGCAATCACAACCGCCGCTCCGCTGGTTCTTATGTCTCTAACTTCTGTTGGGATTTGTTGCATCCTAAGCACAAGACTTCTGGCCGTACTGCTCCTCCTCCTCCTCCTAATAATATAACCGCCGCCGGGACTACCGGTGGCGATCCACTTCTTGCTCGGCGTTGCGCTAACTGCGATACCACTTCCACTCCGCTGTGGCGAAATGGGCCGAGAGGGCCTAAGTCGCTATGCAATGCGTGTGGGATTCGGTTCAAGAAGGAAGAGCGGAGGGCGGCAGCAGCGACGGTGAACAGCACGGCGGCAGAATCAAACCACCATCACCACCACCCAATGTTCAACGGAAACTATACAAATTCAAGTACGTGGGTCCCACACCAGTCACCGGCGATGACTCAGAAACACCATCCCTGCCTGTCGGCGGCCATAGGAAACGACGACGTTGGAAGAACCGAACCGGAAAATGGGATTTCGTTCCTGTCTTGGCGCCTTAACGTGGCTAATACCGATCACCGGTCCACCCTCGTCCATGATTTCACAAGATGA

Coding sequence (CDS)

ATGATGCACCACTACGGCGGCGGAGGCGGCGGCGCCTCTTCTTTTTCCATGTTCTTGTCTGTCCCCAACCACGGCGGCGCTGCCCATGACATCATGGACATGTATTCTTCTTCTTCTACTAATTACGCCTCTTCCTCTTCCTCCTCCTCTCCTTCTTCTGTTGATTGTACGCTCTCTCTCGGTACTCCCTCCACGCGCTCATCGGAATTCGATGCAGACAAACGCGCCGCCGCCCGCAATCACAACCGCCGCTCCGCTGGTTCTTATGTCTCTAACTTCTGTTGGGATTTGTTGCATCCTAAGCACAAGACTTCTGGCCGTACTGCTCCTCCTCCTCCTCCTAATAATATAACCGCCGCCGGGACTACCGGTGGCGATCCACTTCTTGCTCGGCGTTGCGCTAACTGCGATACCACTTCCACTCCGCTGTGGCGAAATGGGCCGAGAGGGCCTAAGTCGCTATGCAATGCGTGTGGGATTCGGTTCAAGAAGGAAGAGCGGAGGGCGGCAGCAGCGACGGTGAACAGCACGGCGGCAGAATCAAACCACCATCACCACCACCCAATGTTCAACGGAAACTATACAAATTCAAGTACGTGGGTCCCACACCAGTCACCGGCGATGACTCAGAAACACCATCCCTGCCTGTCGGCGGCCATAGGAAACGACGACGTTGGAAGAACCGAACCGGAAAATGGGATTTCGTTCCTGTCTTGGCGCCTTAACGTGGCTAATACCGATCACCGGTCCACCCTCGTCCATGATTTCACAAGATGA

Protein sequence

MMHHYGGGGGGASSFSMFLSVPNHGGAAHDIMDMYSSSSTNYASSSSSSSPSSVDCTLSLGTPSTRSSEFDADKRAAARNHNRRSAGSYVSNFCWDLLHPKHKTSGRTAPPPPPNNITAAGTTGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSTAAESNHHHHHPMFNGNYTNSSTWVPHQSPAMTQKHHPCLSAAIGNDDVGRTEPENGISFLSWRLNVANTDHRSTLVHDFTR
Homology
[Close]
BLAST of ClCG07G008580 vs. Swiss-Prot
Match: GAT18_ARATH (GATA transcription factor 18 OS=Arabidopsis thaliana GN=GATA18 PE=2 SV=2)

HSP 1 Score: 189.1 bits (479), Expect = 6.0e-47
Identity = 123/298 (41.28%), Postives = 151/298 (50.67%), Query Frame = 1 

Query: 1   MMHHYG-------GGGGGASSFSMFLSVPNHGGAAHDIMDMYSSSSTNYASSSSSSSPSS 60
           M HH+             A S+SM  S+ N G        ++  +  +Y  SSS      
Sbjct: 20  MFHHHSQSCCYNNNNNSNAGSYSMVFSMQNGG--------VFEQNGEDYHHSSSL----- 79

Query: 61  VDCTLSLGTPSTRSSEFDADKRAAARNHNRRSAGSYVSNFCWDLLHPKHKTSGRTAPPPP 120
           VDCTLSLGTPSTR  E D  +R +  +     A S +SNF WDL+H K+  S +TAP   
Sbjct: 80  VDCTLSLGTPSTRLCEEDEKRRRSTSS----GASSCISNF-WDLIHTKNNNS-KTAPYNN 139

Query: 121 PNNITA--------------AGTTGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACG 180
             + +A               G  GGD LLARRCANCDTTSTPLWRNGPRGPKSLCNACG
Sbjct: 140 VPSFSANKPSRGCSGGGGGGGGGGGGDSLLARRCANCDTTSTPLWRNGPRGPKSLCNACG 199

Query: 181 IRFKKEERRAAAATVNSTAA------------ESNHHHHHPMFNGNYTNSSTWVPHQSPA 240
           IRFKKEERR  AAT N+                S ++++H   N N  N + W  H S  
Sbjct: 200 IRFKKEERRTTAATGNTVVGAAPVQTDQYGHHNSGYNNYHAATNNNNNNGTPWAHHHSTQ 259

Query: 241 MTQKHHPCLSAAIGND-------DVGRTEPENGISFLSWRLNVANTDHRSTLVHDFTR 259
               ++P       +D       +V       G+ FLSWRLNVA+   R++LVHDFTR
Sbjct: 260 RVPCNYPANEIRFMDDYGSGVANNVESDGAHGGVPFLSWRLNVAD---RASLVHDFTR 295

[Close]
BLAST of ClCG07G008580 vs. Swiss-Prot
Match: GAT19_ARATH (GATA transcription factor 19 OS=Arabidopsis thaliana GN=GATA19 PE=2 SV=2)

HSP 1 Score: 153.3 bits (386), Expect = 3.6e-36
Identity = 105/236 (44.49%), Postives = 127/236 (53.81%), Query Frame = 1 

Query: 45  SSSSSSPSSVDCTLSLGTPSTRSSEFDADKRAAARNHNRRSAGSYVSNFCWDLLHPKHKT 104
           S  SS  +SVDCTLSLGTPSTR    D ++R ++  H   + G       WD L+   K 
Sbjct: 14  SHHSSPYASVDCTLSLGTPSTRLCNEDDERRFSS--HTSDTIG-------WDFLNGSKKG 73

Query: 105 SGRTAPPPPPNNITAAGTTGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKK 164
            G                 GG  LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKK
Sbjct: 74  GGG----------------GGHNLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKK 133

Query: 165 EERRAAAATVNSTA---------------AESNHHHHHPMFNGNYTNSSTW--------V 224
           EERRA+ A  NST+               A +N+++++   N  Y +SS W        V
Sbjct: 134 EERRASTAR-NSTSGGGSTAAGVPTLDHQASANYYYNN---NNQYASSSPWHHQHNTQRV 193

Query: 225 PHQSPAMTQKHHPCLSAAIGNDDVGRTEPENGISFLSWRLNVANTDHRSTLVHDFT 258
           P+ SPA  +  +      + +D    T+P     FLSWRLNVA+   R+ LVHDFT
Sbjct: 194 PYYSPANNEYSYVDDVRVVDHDVT--TDP-----FLSWRLNVAD---RTGLVHDFT 210

[Close]
BLAST of ClCG07G008580 vs. Swiss-Prot
Match: GAT20_ARATH (GATA transcription factor 20 OS=Arabidopsis thaliana GN=GATA20 PE=2 SV=2)

HSP 1 Score: 128.6 bits (322), Expect = 9.6e-29
Identity = 89/215 (41.40%), Postives = 108/215 (50.23%), Query Frame = 1 

Query: 13  SSFSMFLSVPNHGGAAHDIMDMYSSSSTNYASSSSSSSPSSVDCTLSLGTPSTRSSEFDA 72
           S+FSMF S  N     H           NY   ++ SS +SVDCTLSLGTPSTR    D 
Sbjct: 8   SNFSMFFSSENDDQNHH-----------NYDPYNNFSSSTSVDCTLSLGTPSTR---LDD 67

Query: 73  DKRAAARNHNRRSAGSYVSNFCWDLLHPKHKTSGRTAPPPPPNNITAAGTTGGDP-LLAR 132
             R ++ N N  S   Y+                        N  T++   GG    L R
Sbjct: 68  HHRFSSANSNNISGDFYIHG---------------------GNAKTSSYKKGGVAHSLPR 127

Query: 133 RCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATV-----NSTAAE------ 192
           RCA+CDTTSTPLWRNGP+GPKSLCNACGIRFKKEERRA A  +      S+AAE      
Sbjct: 128 RCASCDTTSTPLWRNGPKGPKSLCNACGIRFKKEERRATARNLTISGGGSSAAEVPVENS 187

Query: 193 --------SNHHHHHPMFNGNYTNSSTW-VPHQSP 207
                   S+HHHH+   + ++ + +T  VP+ SP
Sbjct: 188 YNGGGNYYSHHHHHYASSSPSWAHQNTQRVPYFSP 187

[Close]
BLAST of ClCG07G008580 vs. Swiss-Prot
Match: GAT22_ARATH (Putative GATA transcription factor 22 OS=Arabidopsis thaliana GN=GATA22 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.8e-12
Identity = 33/48 (68.75%), Postives = 39/48 (81.25%), Query Frame = 1 

Query: 131 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSTA 179
           R C++C+TT TPLWR+GPRGPKSLCNACGIR +++ RRAA AT  +TA
Sbjct: 199 RICSDCNTTKTPLWRSGPRGPKSLCNACGIR-QRKARRAAMATATATA 245

[Close]
BLAST of ClCG07G008580 vs. Swiss-Prot
Match: GTAG_DICDI (GATA zinc finger domain-containing protein 7 OS=Dictyostelium discoideum GN=gtaG PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.4e-11
Identity = 52/168 (30.95%), Postives = 75/168 (44.64%), Query Frame = 1 

Query: 23  NHGGAAHDIMDMYSSSSTNYASSSSSSSPSSVDCTLSLGTPSTRSSEFDADKRAAARNHN 82
           N+   +H     YSS S N   SSSSSS SS     S  + ST SS  + +K ++   H 
Sbjct: 735 NNNNKSHS-SSYYSSMSNNSNPSSSSSSSSS-----SSSSSSTLSSLNNNNKLSSNNGHI 794

Query: 83  R---RSAGSYVSNFCWDLLHPKHKTSGRTAPPPPPNNITAAGTTGGDPLLARRCANCDTT 142
           +    S+ +Y        ++  + T    + P PP   T              C NC T 
Sbjct: 795 KYEPTSSSNYHDQMSQSHIYQNNFTYYDQSFPHPPVKKTHRRRPANIDKSTLYCHNCGTK 854

Query: 143 STPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSTAAESNHHHHH 188
           +TP WR GP GP +LCNACG+ + K++R      ++     SN + +H
Sbjct: 855 NTPEWRRGPSGPATLCNACGLAYAKKQRE-EETNLHKLLLHSNSYSYH 895

[Close]
BLAST of ClCG07G008580 vs. TrEMBL
Match: A0A0A0KY15_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G046650 PE=4 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 1.2e-115
Identity = 222/267 (83.15%), Postives = 229/267 (85.77%), Query Frame = 1 

Query: 1   MMHHYGGGGGG-ASSFSMFLSVPNHGGAAHDIMDMYSSSSTNYASSSSSSSPSSVDCTLS 60
           MMHHYGGGGGG ASSFS+FLSVPNHG A     DMYSSS TNYASSSSS  PSSVDCTLS
Sbjct: 1   MMHHYGGGGGGSASSFSVFLSVPNHGAA-----DMYSSS-TNYASSSSS--PSSVDCTLS 60

Query: 61  LGTPSTRSSEFDADKRAAA---RNHNRRSAGSYVSNFCWDLLHPKHKTSGRTAPP--PPP 120
           LGTPSTRSSEFD DKRAAA   RNH+RRSAGSYVSNFCWDLLHPKHKTSGR         
Sbjct: 61  LGTPSTRSSEFDGDKRAAAAAARNHHRRSAGSYVSNFCWDLLHPKHKTSGRGGGGGGASN 120

Query: 121 NNITAAGTTGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATV 180
           NNI AA + GGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATV
Sbjct: 121 NNINAAVSNGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATV 180

Query: 181 NSTAAESN---HHHHHPMFNGNYTNSSTWVPHQSPAMTQKHHPCLSAAIGNDDVGRTEPE 240
           NS+ AESN   HHHHHPMFNG+YTNS+TWVP Q PA TQK HPCLSAAIGN+DVG   PE
Sbjct: 181 NSSVAESNHHHHHHHHPMFNGSYTNSNTWVPQQLPATTQK-HPCLSAAIGNEDVG---PE 240

Query: 241 NGISFLSWRLNVANTDHRSTLVHDFTR 259
           NGISFLSWRLNVANTDHR TLVHDFTR
Sbjct: 241 NGISFLSWRLNVANTDHRPTLVHDFTR 255

[Close]
BLAST of ClCG07G008580 vs. TrEMBL
Match: A5C2I6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009032 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.7e-54
Identity = 131/252 (51.98%), Postives = 158/252 (62.70%), Query Frame = 1 

Query: 12  ASSFSMFLSVPNHGGAAHDIMDMYSSSSTNYASSSSSSSPSSVDCTLSLGTPSTRSSEFD 71
           ++SFSM  S+PNH     D  DMY  +S         SS SSVDCTLSLGTPSTR ++ D
Sbjct: 99  SNSFSMLFSMPNH--KPFDETDMYPFTS---------SSSSSVDCTLSLGTPSTRLTDND 158

Query: 72  ADKRAAARNHNRRSAGSYVSNFCWDLLHPKHKTSGRTAPPPPPNNI-TAAGTTGGDPLLA 131
                  R H+ R AGS VSNFCWD+L  KH  S  T  P    +  +++  + GDPLLA
Sbjct: 159 EK-----RMHHDRRAGSCVSNFCWDILQXKHTPSAPTHKPSRGGSSGSSSNNSAGDPLLA 218

Query: 132 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSTAAESNHHHHHPMF 191
           RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA AA   + A        H M 
Sbjct: 219 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAAAATTGATAGVMEPQHIMI 278

Query: 192 NGNYTNSSTWVPHQSPAMTQKHHPCLSAAIGND----DVGRTEPENGISFLSWRLNVANT 251
           +    ++++WV H   + TQK  PCLS A+GN+    +    + + GI FLSWRLNV + 
Sbjct: 279 S---HHNNSWVHH---SQTQK-MPCLSPAMGNEFRFIEDDDRDSDTGIPFLSWRLNVTD- 324

Query: 252 DHRSTLVHDFTR 259
             R +LVHDFTR
Sbjct: 339 --RPSLVHDFTR 324

[Close]
BLAST of ClCG07G008580 vs. TrEMBL
Match: K7LNF5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G068700 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 3.0e-53
Identity = 131/251 (52.19%), Postives = 155/251 (61.75%), Query Frame = 1 

Query: 13  SSFSMFLSVPNHGGAAHDIMDMYSSSSTNYASSSSSSSPSSVDCTLSLGTPSTRSSEFDA 72
           SSF+MF S+PNH    +D  D    +  +Y+S + SSS SSVDCTLSLGTPSTR SE D 
Sbjct: 27  SSFAMFFSMPNHKPPPYDDSD----NIYDYSSFTPSSS-SSVDCTLSLGTPSTRFSE-DE 86

Query: 73  DKRAAARNHNRRSAGSYVSNFCWDLLHPKHKTSGRTAPPPPPNNITAAGTTGGDPLLARR 132
           +KR+    H RRS    VSNFCWDLL  KH         P  ++ ++  T   DPLLARR
Sbjct: 87  EKRS---RHERRS----VSNFCWDLLQSKHNN-------PQSHSKSSRTTNTTDPLLARR 146

Query: 133 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSTAAESNHHHHHPMFNG 192
           CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA+AA     +A S       +   
Sbjct: 147 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRASAAAATPASAASG-----GVMES 206

Query: 193 NYTNSSTWVPHQSPAMTQKHHPCLSAAIGN-----DDVGRTEPENGISFLSWRLNVANTD 252
               +++W  HQ     Q    C S  +GN     DD  R   +NGI FLSWRLNV +  
Sbjct: 207 AQVYNNSWYAHQQSQKMQ----CFSPGMGNEFRFVDDADRDAADNGIPFLSWRLNVTD-- 245

Query: 253 HRSTLVHDFTR 259
            R++LVHDFTR
Sbjct: 267 -RTSLVHDFTR 245

[Close]
BLAST of ClCG07G008580 vs. TrEMBL
Match: M5VSX0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014930mg PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.5e-52
Identity = 135/272 (49.63%), Postives = 157/272 (57.72%), Query Frame = 1 

Query: 13  SSFSMFLSVPNHGGAA-------HDIMDMYSSSSTNYASSSSSSSPSSVDCTLSLGTPST 72
           SSFSM  S+PNH           H+    + +    +ASSSSS     VDCTLSLGTPST
Sbjct: 28  SSFSMLFSMPNHHKPYDHHHHHHHETQHDHHNHMYPFASSSSS-----VDCTLSLGTPST 87

Query: 73  RSSEFDADKRAAARNHNRRSAGSYVSNFCWDLLHPKHKTSGRTAPPPPPNNITAAGTTGG 132
           R +E D         + RRS    VSNFCWDLL PKH  +  T+     N    +G  G 
Sbjct: 88  RLTENDVVLDDKRTRNERRS----VSNFCWDLLQPKHHATSATSSHHHKNGSHRSGGNGN 147

Query: 133 ----------DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVN 192
                     DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA AA  N
Sbjct: 148 GVSNAVHSNNDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAAAAN 207

Query: 193 --STAAESNHHHHHPMFNGNYTNSSTWVPHQSPAMTQKHHPCLSAAIGN------DDVGR 252
             S++     H+ H +   ++ NS  W+PH   + TQK  PC S A+GN      DD   
Sbjct: 208 GGSSSVVGMDHNSHMLSQHHHNNS--WMPH---SQTQK-MPCFSPAMGNEFRFMEDDTAH 267

Query: 253 TEPE-NGISFLSWRLNVANTDHRSTLVHDFTR 259
            E +  GI FLSWRLNV +   R +LVHDFTR
Sbjct: 268 HENDATGIPFLSWRLNVTD---RPSLVHDFTR 281

[Close]
BLAST of ClCG07G008580 vs. TrEMBL
Match: A0A0S3T469_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G163600 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 9.6e-52
Identity = 129/249 (51.81%), Postives = 150/249 (60.24%), Query Frame = 1 

Query: 10  GGASSFSMFLSVPNHGGAAHDIMDMYSSSSTNYASSSSSSSPSSVDCTLSLGTPSTRSSE 69
           G  +SFSM  S PNH     D  D+Y  S T   SSSSSSSPS VDCTLSLGTPSTR S+
Sbjct: 11  GQTTSFSMPFSGPNHKPPYQD-SDIYDYSFT---SSSSSSSPS-VDCTLSLGTPSTRFSQ 70

Query: 70  FDADKRAAARNHNRRSAGSYVSNFCWDLLHPKHKTSGRTAPPPPPNNITAAGTTGGDPLL 129
            D         H RRS    VSNFCWDLL  KH    +T      ++ T+  T+  DPL+
Sbjct: 71  DDQKPT----RHERRS----VSNFCWDLLQSKHNPQSQTK-----SSRTSNTTSNPDPLI 130

Query: 130 ARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSTAAESNHHHHHPM 189
           ARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA+AA      A         +
Sbjct: 131 ARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRASAAAAPPQRASGGMMESAQV 190

Query: 190 FNGNYTNSSTWVPHQSPAMTQKHHPCLSAAIGNDDVGRTEPENGISFLSWRLNVANTDHR 249
           +N      ++W  H      Q   P + +     D G  + +NGI FLSWRLNVA+   R
Sbjct: 191 YN------NSWYAHPQSQKMQCFSPGMGSEFRFADDGDRDADNGIPFLSWRLNVAD---R 232

Query: 250 STLVHDFTR 259
           ++LVHDFTR
Sbjct: 251 TSLVHDFTR 232

[Close]
BLAST of ClCG07G008580 vs. TAIR10
Match: AT3G50870.1 (AT3G50870.1 GATA type zinc finger transcription factor family protein)

HSP 1 Score: 189.1 bits (479), Expect = 3.4e-48
Identity = 123/298 (41.28%), Postives = 151/298 (50.67%), Query Frame = 1 

Query: 1   MMHHYG-------GGGGGASSFSMFLSVPNHGGAAHDIMDMYSSSSTNYASSSSSSSPSS 60
           M HH+             A S+SM  S+ N G        ++  +  +Y  SSS      
Sbjct: 20  MFHHHSQSCCYNNNNNSNAGSYSMVFSMQNGG--------VFEQNGEDYHHSSSL----- 79

Query: 61  VDCTLSLGTPSTRSSEFDADKRAAARNHNRRSAGSYVSNFCWDLLHPKHKTSGRTAPPPP 120
           VDCTLSLGTPSTR  E D  +R +  +     A S +SNF WDL+H K+  S +TAP   
Sbjct: 80  VDCTLSLGTPSTRLCEEDEKRRRSTSS----GASSCISNF-WDLIHTKNNNS-KTAPYNN 139

Query: 121 PNNITA--------------AGTTGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACG 180
             + +A               G  GGD LLARRCANCDTTSTPLWRNGPRGPKSLCNACG
Sbjct: 140 VPSFSANKPSRGCSGGGGGGGGGGGGDSLLARRCANCDTTSTPLWRNGPRGPKSLCNACG 199

Query: 181 IRFKKEERRAAAATVNSTAA------------ESNHHHHHPMFNGNYTNSSTWVPHQSPA 240
           IRFKKEERR  AAT N+                S ++++H   N N  N + W  H S  
Sbjct: 200 IRFKKEERRTTAATGNTVVGAAPVQTDQYGHHNSGYNNYHAATNNNNNNGTPWAHHHSTQ 259

Query: 241 MTQKHHPCLSAAIGND-------DVGRTEPENGISFLSWRLNVANTDHRSTLVHDFTR 259
               ++P       +D       +V       G+ FLSWRLNVA+   R++LVHDFTR
Sbjct: 260 RVPCNYPANEIRFMDDYGSGVANNVESDGAHGGVPFLSWRLNVAD---RASLVHDFTR 295

[Close]
BLAST of ClCG07G008580 vs. TAIR10
Match: AT4G36620.1 (AT4G36620.1 GATA transcription factor 19)

HSP 1 Score: 153.3 bits (386), Expect = 2.0e-37
Identity = 105/236 (44.49%), Postives = 127/236 (53.81%), Query Frame = 1 

Query: 45  SSSSSSPSSVDCTLSLGTPSTRSSEFDADKRAAARNHNRRSAGSYVSNFCWDLLHPKHKT 104
           S  SS  +SVDCTLSLGTPSTR    D ++R ++  H   + G       WD L+   K 
Sbjct: 14  SHHSSPYASVDCTLSLGTPSTRLCNEDDERRFSS--HTSDTIG-------WDFLNGSKKG 73

Query: 105 SGRTAPPPPPNNITAAGTTGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKK 164
            G                 GG  LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKK
Sbjct: 74  GGG----------------GGHNLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKK 133

Query: 165 EERRAAAATVNSTA---------------AESNHHHHHPMFNGNYTNSSTW--------V 224
           EERRA+ A  NST+               A +N+++++   N  Y +SS W        V
Sbjct: 134 EERRASTAR-NSTSGGGSTAAGVPTLDHQASANYYYNN---NNQYASSSPWHHQHNTQRV 193

Query: 225 PHQSPAMTQKHHPCLSAAIGNDDVGRTEPENGISFLSWRLNVANTDHRSTLVHDFT 258
           P+ SPA  +  +      + +D    T+P     FLSWRLNVA+   R+ LVHDFT
Sbjct: 194 PYYSPANNEYSYVDDVRVVDHDVT--TDP-----FLSWRLNVAD---RTGLVHDFT 210

[Close]
BLAST of ClCG07G008580 vs. TAIR10
Match: AT2G18380.1 (AT2G18380.1 GATA transcription factor 20)

HSP 1 Score: 128.6 bits (322), Expect = 5.4e-30
Identity = 89/215 (41.40%), Postives = 108/215 (50.23%), Query Frame = 1 

Query: 13  SSFSMFLSVPNHGGAAHDIMDMYSSSSTNYASSSSSSSPSSVDCTLSLGTPSTRSSEFDA 72
           S+FSMF S  N     H           NY   ++ SS +SVDCTLSLGTPSTR    D 
Sbjct: 8   SNFSMFFSSENDDQNHH-----------NYDPYNNFSSSTSVDCTLSLGTPSTR---LDD 67

Query: 73  DKRAAARNHNRRSAGSYVSNFCWDLLHPKHKTSGRTAPPPPPNNITAAGTTGGDP-LLAR 132
             R ++ N N  S   Y+                        N  T++   GG    L R
Sbjct: 68  HHRFSSANSNNISGDFYIHG---------------------GNAKTSSYKKGGVAHSLPR 127

Query: 133 RCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATV-----NSTAAE------ 192
           RCA+CDTTSTPLWRNGP+GPKSLCNACGIRFKKEERRA A  +      S+AAE      
Sbjct: 128 RCASCDTTSTPLWRNGPKGPKSLCNACGIRFKKEERRATARNLTISGGGSSAAEVPVENS 187

Query: 193 --------SNHHHHHPMFNGNYTNSSTW-VPHQSP 207
                   S+HHHH+   + ++ + +T  VP+ SP
Sbjct: 188 YNGGGNYYSHHHHHYASSSPSWAHQNTQRVPYFSP 187

[Close]
BLAST of ClCG07G008580 vs. TAIR10
Match: AT4G26150.1 (AT4G26150.1 cytokinin-responsive gata factor 1)

HSP 1 Score: 73.9 bits (180), Expect = 1.6e-13
Identity = 33/48 (68.75%), Postives = 39/48 (81.25%), Query Frame = 1 

Query: 131 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSTA 179
           R C++C+TT TPLWR+GPRGPKSLCNACGIR +++ RRAA AT  +TA
Sbjct: 199 RICSDCNTTKTPLWRSGPRGPKSLCNACGIR-QRKARRAAMATATATA 245

[Close]
BLAST of ClCG07G008580 vs. TAIR10
Match: AT5G56860.1 (AT5G56860.1 GATA type zinc finger transcription factor family protein)

HSP 1 Score: 71.2 bits (173), Expect = 1.0e-12
Identity = 33/58 (56.90%), Postives = 40/58 (68.97%), Query Frame = 1 

Query: 115 NNITAAGTTGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAA 173
           N I   G +  + ++ R C++C+TT TPLWR+GPRGPKSLCNACGIR +K  R A AA
Sbjct: 215 NTINENGYSNNNGVI-RVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMAA 271

[Close]
BLAST of ClCG07G008580 vs. NCBI nr
Match: gi|659102361|ref|XP_008452087.1| (PREDICTED: GATA transcription factor 18-like [Cucumis melo])

HSP 1 Score: 427.6 bits (1098), Expect = 1.6e-116
Identity = 224/265 (84.53%), Postives = 230/265 (86.79%), Query Frame = 1 

Query: 1   MMHHYGGGGGG----ASSFSMFLSVPNHGGAAHDIMDMYSSSSTNYASSSSSSS--PSSV 60
           MMHHYGGGGGG    ASSFS+FLSVPNHG A     DMYSSS TNYASSSSSSS  PSSV
Sbjct: 1   MMHHYGGGGGGGGGGASSFSLFLSVPNHGAA-----DMYSSS-TNYASSSSSSSSSPSSV 60

Query: 61  DCTLSLGTPSTRSSEFDADKRAAARNHNRRSAGSYVSNFCWDLLHPKHKTSGRTAPPPPP 120
           DCTLSLGTPSTRSSEFD+DKRAAARN +RRSAGSYVSNFCWDLLHPKHKTSGR A     
Sbjct: 61  DCTLSLGTPSTRSSEFDSDKRAAARNPHRRSAGSYVSNFCWDLLHPKHKTSGRGAGGAAS 120

Query: 121 NN-ITAAGTTGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAAT 180
           NN ITAA +  GDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAAT
Sbjct: 121 NNNITAAVSNSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAAT 180

Query: 181 VNSTAAESNHHHHHPMFNGNYTNSSTWVPHQSPAMTQKHHPCLSAAIGNDDVGRTEPENG 240
           VNS+ AESN HHHH MFNG+YTNSSTWVP Q PA TQK HPCLSAAIGNDDVG   PENG
Sbjct: 181 VNSSTAESN-HHHHSMFNGSYTNSSTWVPQQLPATTQK-HPCLSAAIGNDDVG---PENG 240

Query: 241 ISFLSWRLNVANTDHRSTLVHDFTR 259
           ISFLSWRLNVANTDHR TLVHDFTR
Sbjct: 241 ISFLSWRLNVANTDHRPTLVHDFTR 254

[Close]
BLAST of ClCG07G008580 vs. NCBI nr
Match: gi|778690730|ref|XP_004146553.2| (PREDICTED: GATA transcription factor 18-like [Cucumis sativus])

HSP 1 Score: 424.1 bits (1089), Expect = 1.8e-115
Identity = 222/267 (83.15%), Postives = 229/267 (85.77%), Query Frame = 1 

Query: 1   MMHHYGGGGGG-ASSFSMFLSVPNHGGAAHDIMDMYSSSSTNYASSSSSSSPSSVDCTLS 60
           MMHHYGGGGGG ASSFS+FLSVPNHG A     DMYSSS TNYASSSSS  PSSVDCTLS
Sbjct: 1   MMHHYGGGGGGSASSFSVFLSVPNHGAA-----DMYSSS-TNYASSSSS--PSSVDCTLS 60

Query: 61  LGTPSTRSSEFDADKRAAA---RNHNRRSAGSYVSNFCWDLLHPKHKTSGRTAPP--PPP 120
           LGTPSTRSSEFD DKRAAA   RNH+RRSAGSYVSNFCWDLLHPKHKTSGR         
Sbjct: 61  LGTPSTRSSEFDGDKRAAAAAARNHHRRSAGSYVSNFCWDLLHPKHKTSGRGGGGGGASN 120

Query: 121 NNITAAGTTGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATV 180
           NNI AA + GGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATV
Sbjct: 121 NNINAAVSNGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATV 180

Query: 181 NSTAAESN---HHHHHPMFNGNYTNSSTWVPHQSPAMTQKHHPCLSAAIGNDDVGRTEPE 240
           NS+ AESN   HHHHHPMFNG+YTNS+TWVP Q PA TQK HPCLSAAIGN+DVG   PE
Sbjct: 181 NSSVAESNHHHHHHHHPMFNGSYTNSNTWVPQQLPATTQK-HPCLSAAIGNEDVG---PE 240

Query: 241 NGISFLSWRLNVANTDHRSTLVHDFTR 259
           NGISFLSWRLNVANTDHR TLVHDFTR
Sbjct: 241 NGISFLSWRLNVANTDHRPTLVHDFTR 255

[Close]
BLAST of ClCG07G008580 vs. NCBI nr
Match: gi|147792212|emb|CAN72981.1| (hypothetical protein VITISV_009032 [Vitis vinifera])

HSP 1 Score: 220.3 bits (560), Expect = 3.9e-54
Identity = 131/252 (51.98%), Postives = 158/252 (62.70%), Query Frame = 1 

Query: 12  ASSFSMFLSVPNHGGAAHDIMDMYSSSSTNYASSSSSSSPSSVDCTLSLGTPSTRSSEFD 71
           ++SFSM  S+PNH     D  DMY  +S         SS SSVDCTLSLGTPSTR ++ D
Sbjct: 99  SNSFSMLFSMPNH--KPFDETDMYPFTS---------SSSSSVDCTLSLGTPSTRLTDND 158

Query: 72  ADKRAAARNHNRRSAGSYVSNFCWDLLHPKHKTSGRTAPPPPPNNI-TAAGTTGGDPLLA 131
                  R H+ R AGS VSNFCWD+L  KH  S  T  P    +  +++  + GDPLLA
Sbjct: 159 EK-----RMHHDRRAGSCVSNFCWDILQXKHTPSAPTHKPSRGGSSGSSSNNSAGDPLLA 218

Query: 132 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSTAAESNHHHHHPMF 191
           RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA AA   + A        H M 
Sbjct: 219 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAAAATTGATAGVMEPQHIMI 278

Query: 192 NGNYTNSSTWVPHQSPAMTQKHHPCLSAAIGND----DVGRTEPENGISFLSWRLNVANT 251
           +    ++++WV H   + TQK  PCLS A+GN+    +    + + GI FLSWRLNV + 
Sbjct: 279 S---HHNNSWVHH---SQTQK-MPCLSPAMGNEFRFIEDDDRDSDTGIPFLSWRLNVTD- 324

Query: 252 DHRSTLVHDFTR 259
             R +LVHDFTR
Sbjct: 339 --RPSLVHDFTR 324

[Close]
BLAST of ClCG07G008580 vs. NCBI nr
Match: gi|731387122|ref|XP_010649139.1| (PREDICTED: GATA transcription factor 18-like [Vitis vinifera])

HSP 1 Score: 220.3 bits (560), Expect = 3.9e-54
Identity = 131/252 (51.98%), Postives = 158/252 (62.70%), Query Frame = 1 

Query: 12  ASSFSMFLSVPNHGGAAHDIMDMYSSSSTNYASSSSSSSPSSVDCTLSLGTPSTRSSEFD 71
           ++SFSM  S+PNH     D  DMY  +S         SS SSVDCTLSLGTPSTR ++ D
Sbjct: 24  SNSFSMLFSMPNH--KPFDETDMYPFTS---------SSSSSVDCTLSLGTPSTRLTDND 83

Query: 72  ADKRAAARNHNRRSAGSYVSNFCWDLLHPKHKTSGRTAPPPPPNNI-TAAGTTGGDPLLA 131
                  R H+ R AGS VSNFCWD+L  KH  S  T  P    +  +++  + GDPLLA
Sbjct: 84  EK-----RMHHDRRAGSCVSNFCWDILQSKHTPSAPTHKPSRGGSSGSSSNNSAGDPLLA 143

Query: 132 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSTAAESNHHHHHPMF 191
           RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA AA   + A        H M 
Sbjct: 144 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAAAATTGATAGVMEPQHIMI 203

Query: 192 NGNYTNSSTWVPHQSPAMTQKHHPCLSAAIGND----DVGRTEPENGISFLSWRLNVANT 251
           +    ++++WV H   + TQK  PCLS A+GN+    +    + + GI FLSWRLNV + 
Sbjct: 204 S---HHNNSWVHH---SQTQK-MPCLSPAMGNEFRFIEDDDRDSDTGIPFLSWRLNVTD- 249

Query: 252 DHRSTLVHDFTR 259
             R +LVHDFTR
Sbjct: 264 --RPSLVHDFTR 249

[Close]
BLAST of ClCG07G008580 vs. NCBI nr
Match: gi|571487574|ref|XP_006590690.1| (PREDICTED: GATA transcription factor 18-like [Glycine max])

HSP 1 Score: 216.9 bits (551), Expect = 4.3e-53
Identity = 131/251 (52.19%), Postives = 155/251 (61.75%), Query Frame = 1 

Query: 13  SSFSMFLSVPNHGGAAHDIMDMYSSSSTNYASSSSSSSPSSVDCTLSLGTPSTRSSEFDA 72
           SSF+MF S+PNH    +D  D    +  +Y+S + SSS SSVDCTLSLGTPSTR SE D 
Sbjct: 27  SSFAMFFSMPNHKPPPYDDSD----NIYDYSSFTPSSS-SSVDCTLSLGTPSTRFSE-DE 86

Query: 73  DKRAAARNHNRRSAGSYVSNFCWDLLHPKHKTSGRTAPPPPPNNITAAGTTGGDPLLARR 132
           +KR+    H RRS    VSNFCWDLL  KH         P  ++ ++  T   DPLLARR
Sbjct: 87  EKRS---RHERRS----VSNFCWDLLQSKHNN-------PQSHSKSSRTTNTTDPLLARR 146

Query: 133 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSTAAESNHHHHHPMFNG 192
           CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA+AA     +A S       +   
Sbjct: 147 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRASAAAATPASAASG-----GVMES 206

Query: 193 NYTNSSTWVPHQSPAMTQKHHPCLSAAIGN-----DDVGRTEPENGISFLSWRLNVANTD 252
               +++W  HQ     Q    C S  +GN     DD  R   +NGI FLSWRLNV +  
Sbjct: 207 AQVYNNSWYAHQQSQKMQ----CFSPGMGNEFRFVDDADRDAADNGIPFLSWRLNVTD-- 245

Query: 253 HRSTLVHDFTR 259
            R++LVHDFTR
Sbjct: 267 -RTSLVHDFTR 245

The following BLAST results are available for this feature:
BLAST of ClCG07G008580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GAT18_ARATH6.0e-4741.28GATA transcription factor 18 OS=Arabidopsis thaliana GN=GATA18 PE=2 SV=2[more]
GAT19_ARATH3.6e-3644.49GATA transcription factor 19 OS=Arabidopsis thaliana GN=GATA19 PE=2 SV=2[more]
GAT20_ARATH9.6e-2941.40GATA transcription factor 20 OS=Arabidopsis thaliana GN=GATA20 PE=2 SV=2[more]
GAT22_ARATH2.8e-1268.75Putative GATA transcription factor 22 OS=Arabidopsis thaliana GN=GATA22 PE=3 SV=... [more]
GTAG_DICDI1.4e-1130.95GATA zinc finger domain-containing protein 7 OS=Dictyostelium discoideum GN=gtaG... [more]
BLAST of ClCG07G008580 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KY15_CUCSA1.2e-11583.15Uncharacterized protein OS=Cucumis sativus GN=Csa_4G046650 PE=4 SV=1[more]
A5C2I6_VITVI2.7e-5451.98Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009032 PE=4 SV=1[more]
K7LNF5_SOYBN3.0e-5352.19Uncharacterized protein OS=Glycine max GN=GLYMA_11G068700 PE=4 SV=1[more]
M5VSX0_PRUPE2.5e-5249.63Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014930mg PE=4 SV=1[more]
A0A0S3T469_PHAAN9.6e-5251.81Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G163600 PE=... [more]
BLAST of ClCG07G008580 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G50870.13.4e-4841.28 GATA type zinc finger transcription factor family protein[more]
AT4G36620.12.0e-3744.49 GATA transcription factor 19[more]
AT2G18380.15.4e-3041.40 GATA transcription factor 20[more]
AT4G26150.11.6e-1368.75 cytokinin-responsive gata factor 1[more]
AT5G56860.11.0e-1256.90 GATA type zinc finger transcription factor family protein[more]
BLAST of ClCG07G008580 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659102361|ref|XP_008452087.1|1.6e-11684.53PREDICTED: GATA transcription factor 18-like [Cucumis melo][more]
gi|778690730|ref|XP_004146553.2|1.8e-11583.15PREDICTED: GATA transcription factor 18-like [Cucumis sativus][more]
gi|147792212|emb|CAN72981.1|3.9e-5451.98hypothetical protein VITISV_009032 [Vitis vinifera][more]
gi|731387122|ref|XP_010649139.1|3.9e-5451.98PREDICTED: GATA transcription factor 18-like [Vitis vinifera][more]
gi|571487574|ref|XP_006590690.1|4.3e-5352.19PREDICTED: GATA transcription factor 18-like [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000679Znf_GATA
IPR013088Znf_NHR/GATA
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0008270zinc ion binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG07G008580.1ClCG07G008580.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000679Zinc finger, GATA-typePFAMPF00320GATAcoord: 133..167
score: 6.0
IPR000679Zinc finger, GATA-typeSMARTSM00401GATA_3coord: 127..182
score: 5.4
IPR000679Zinc finger, GATA-typePROSITEPS00344GATA_ZN_FINGER_1coord: 133..158
scor
IPR000679Zinc finger, GATA-typePROFILEPS50114GATA_ZN_FINGER_2coord: 127..163
score: 1
IPR013088Zinc finger, NHR/GATA-typeGENE3DG3DSA:3.30.50.10coord: 131..167
score: 4.0
NoneNo IPR availablePANTHERPTHR10071TRANSCRIPTION FACTOR GATA GATA BINDING FACTORcoord: 12..180
score: 4.1
NoneNo IPR availablePANTHERPTHR10071:SF156GATA TRANSCRIPTION FACTOR 18-RELATEDcoord: 12..180
score: 4.1
NoneNo IPR availableunknownSSF57716Glucocorticoid receptor-like (DNA-binding domain)coord: 130..176
score: 9.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG07G008580Csa4G046650Cucumber (Chinese Long) v2cuwcgB325
ClCG07G008580MELO3C016391Melon (DHL92) v3.5.1mewcgB484
ClCG07G008580Cla014581Watermelon (97103) v1wcgwmB364
ClCG07G008580Cla97C07G135600Watermelon (97103) v2wcgwmbB307
ClCG07G008580Bhi01G001824Wax gourdwcgwgoB578
ClCG07G008580CSPI04G05430Wild cucumber (PI 183967)cpiwcgB342
ClCG07G008580Cucsa.106490Cucumber (Gy14) v1cgywcgB151
ClCG07G008580CmaCh04G007570Cucurbita maxima (Rimu)cmawcgB668
ClCG07G008580CmoCh04G008070Cucurbita moschata (Rifu)cmowcgB670
ClCG07G008580Lsi07G002510Bottle gourd (USVL1VR-Ls)lsiwcgB413
ClCG07G008580Cp4.1LG01g07010Cucurbita pepo (Zucchini)cpewcgB412
ClCG07G008580CsGy4G005320Cucumber (Gy14) v2cgybwcgB303
ClCG07G008580MELO3C016391.2Melon (DHL92) v3.6.1medwcgB479
ClCG07G008580Carg14155Silver-seed gourdcarwcgB0916
ClCG07G008580CsaV3_4G005580Cucumber (Chinese Long) v3cucwcgB344
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG07G008580Silver-seed gourdcarwcgB0400
ClCG07G008580Silver-seed gourdcarwcgB0999
ClCG07G008580Cucumber (Chinese Long) v3cucwcgB167
ClCG07G008580Cucumber (Chinese Long) v3cucwcgB509
ClCG07G008580Watermelon (97103) v2wcgwmbB284
ClCG07G008580Wax gourdwcgwgoB560
ClCG07G008580Watermelon (Charleston Gray)wcgwcgB107
ClCG07G008580Cucurbita maxima (Rimu)cmawcgB301
ClCG07G008580Cucurbita maxima (Rimu)cmawcgB599
ClCG07G008580Cucurbita maxima (Rimu)cmawcgB774
ClCG07G008580Cucurbita moschata (Rifu)cmowcgB294
ClCG07G008580Cucurbita moschata (Rifu)cmowcgB599
ClCG07G008580Cucurbita moschata (Rifu)cmowcgB775
ClCG07G008580Wild cucumber (PI 183967)cpiwcgB515
ClCG07G008580Cucumber (Chinese Long) v2cuwcgB489
ClCG07G008580Melon (DHL92) v3.5.1mewcgB125
ClCG07G008580Melon (DHL92) v3.5.1mewcgB543
ClCG07G008580Watermelon (97103) v1wcgwmB383
ClCG07G008580Cucurbita pepo (Zucchini)cpewcgB210
ClCG07G008580Cucurbita pepo (Zucchini)cpewcgB445
ClCG07G008580Bottle gourd (USVL1VR-Ls)lsiwcgB150
ClCG07G008580Cucumber (Gy14) v2cgybwcgB450
ClCG07G008580Melon (DHL92) v3.6.1medwcgB539