Cp4.1LG01g07010 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG01g07010
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionGATA transcription factor, putative
LocationCp4.1LG01 : 4015258 .. 4016286 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGCACCACTGCGGCGGCGCCGGCGGAGCTGCCTCTTCATTTTCCGTCTTCCTGTCGGTGCCCAACCACGGTGGCGCTGCCCATGACATGATGGATATCTACTCTAATAATTATGCCTCCTCCTCCTCCTCTTCTTCTCCTTCATCCGTTGATTGTACTCTCTCTCTTGGTACTCCCTCTACGCGATCATCGGAGTTCGATTCCGACAAACGCGCCGCCCCCCGCCATCACCGCCGCTCCGCCGGTTCTTATGTCTCTAACTTCTGTTGGGACTTGTTGCATCCTAAACACAAGAGTGCTGGCCGTTCCACGGCGAGTAATGCCGCCGCTGTCCCTTCCAGTGGCGATCCGCTCCTCGCTCGGCGGTGCGCTAACTGCGATACCACTTCTACTCCGCTTTGGAGAAATGGGCCGAGAGGGCCTAAGGTAAATCACGTGATTTCAAATTATGGAAATTATTTTAATTTTTTTTTTAAATGTAAATTATTTTTTTAAAGCTTTAACAATTGTTTATAATAGAGATTCTATTCTGATTTTAGTAATTTGTTGGAGTTCTGTTTAAGTTACCGATGCTTATATTATTTACCATAATTTTATTTGTTAAAACGTTATAATTTTAATTAAAAATTACAATAAATTTGAATTAAAGAATAATTGAGATTAGACTAAATTCAATGTAATTACTTTTTTATTGTAACAATAAAATTTGAATTTATTTATTTAATTGAAATGCAGTCCCTATGCAATGCGTGTGGGATTCGGTTCAAGAAGGAAGAGCGGAGGGCGGCGGCGACGGTGAACTGCACGGCTACTACAATGGCGGCGGAATCTAACAACCACCATCACCTCCACCAACACCACCAGATGTTCAACGGAAACTACACGAATTCAACCGCTACATGGGTTCCACACCACTCGCCAGTGGCAACCCAGAAACTCCCGTGCCTGTCGGCGGCGGCTATTAACAACGAATCAATGTTTATAGGAAACGACGACGTTCGAAGAACCGAACAAGAAAACGGCATC

mRNA sequence

ATGATGCACCACTGCGGCGGCGCCGGCGGAGCTGCCTCTTCATTTTCCGTCTTCCTGTCGGTGCCCAACCACGGTGGCGCTGCCCATGACATGATGGATATCTACTCTAATAATTATGCCTCCTCCTCCTCCTCTTCTTCTCCTTCATCCGTTGATTGTACTCTCTCTCTTGGTACTCCCTCTACGCGATCATCGGAGTTCGATTCCGACAAACGCGCCGCCCCCCGCCATCACCGCCGCTCCGCCGGTTCTTATGTCTCTAACTTCTGTTGGGACTTGTTGCATCCTAAACACAAGAGTGCTGGCCGTTCCACGGCGAGTAATGCCGCCGCTGTCCCTTCCAGTGGCGATCCGCTCCTCGCTCGGCGGTGCGCTAACTGCGATACCACTTCTACTCCGCTTTGGAGAAATGGGCCGAGAGGGCCTAAGTCCCTATGCAATGCGTGTGGGATTCGGTTCAAGAAGGAAGAGCGGAGGGCGGCGGCGACGGTGAACTGCACGGCTACTACAATGGCGGCGGAATCTAACAACCACCATCACCTCCACCAACACCACCAGATGTTCAACGGAAACTACACGAATTCAACCGCTACATGGGTTCCACACCACTCGCCAGTGGCAACCCAGAAACTCCCGTGCCTGTCGGCGGCGGCTATTAACAACGAATCAATGTTTATAGGAAACGACGACGTTCGAAGAACCGAACAAGAAAACGGCATC

Coding sequence (CDS)

ATGATGCACCACTGCGGCGGCGCCGGCGGAGCTGCCTCTTCATTTTCCGTCTTCCTGTCGGTGCCCAACCACGGTGGCGCTGCCCATGACATGATGGATATCTACTCTAATAATTATGCCTCCTCCTCCTCCTCTTCTTCTCCTTCATCCGTTGATTGTACTCTCTCTCTTGGTACTCCCTCTACGCGATCATCGGAGTTCGATTCCGACAAACGCGCCGCCCCCCGCCATCACCGCCGCTCCGCCGGTTCTTATGTCTCTAACTTCTGTTGGGACTTGTTGCATCCTAAACACAAGAGTGCTGGCCGTTCCACGGCGAGTAATGCCGCCGCTGTCCCTTCCAGTGGCGATCCGCTCCTCGCTCGGCGGTGCGCTAACTGCGATACCACTTCTACTCCGCTTTGGAGAAATGGGCCGAGAGGGCCTAAGTCCCTATGCAATGCGTGTGGGATTCGGTTCAAGAAGGAAGAGCGGAGGGCGGCGGCGACGGTGAACTGCACGGCTACTACAATGGCGGCGGAATCTAACAACCACCATCACCTCCACCAACACCACCAGATGTTCAACGGAAACTACACGAATTCAACCGCTACATGGGTTCCACACCACTCGCCAGTGGCAACCCAGAAACTCCCGTGCCTGTCGGCGGCGGCTATTAACAACGAATCAATGTTTATAGGAAACGACGACGTTCGAAGAACCGAACAAGAAAACGGCATC

Protein sequence

MMHHCGGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATTMAAESNNHHHLHQHHQMFNGNYTNSTATWVPHHSPVATQKLPCLSAAAINNESMFIGNDDVRRTEQENGI
BLAST of Cp4.1LG01g07010 vs. Swiss-Prot
Match: GAT18_ARATH (GATA transcription factor 18 OS=Arabidopsis thaliana GN=GATA18 PE=2 SV=2)

HSP 1 Score: 142.5 bits (358), Expect = 6.0e-33
Identity = 102/225 (45.33%), Postives = 123/225 (54.67%), Query Frame = 1

Query: 12  ASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSPSSVDCTLSLGTPSTRSSEFDSDK 71
           A S+S+  S+ N G        ++  N      SSS   VDCTLSLGTPSTR  E D  +
Sbjct: 38  AGSYSMVFSMQNGG--------VFEQNGEDYHHSSS--LVDCTLSLGTPSTRLCEEDEKR 97

Query: 72  RAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASN----AAAVPS------------- 131
           R   R     A S +SNF WDL+H K+ ++  +  +N    +A  PS             
Sbjct: 98  R---RSTSSGASSCISNF-WDLIHTKNNNSKTAPYNNVPSFSANKPSRGCSGGGGGGGGG 157

Query: 132 -SGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCT---ATT 191
             GD LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERR  A    T   A  
Sbjct: 158 GGGDSLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRTTAATGNTVVGAAP 217

Query: 192 MAAESNNHHH--LHQHHQMFNGNYTNSTATWVPHHSPVATQKLPC 214
           +  +   HH+   + +H   N N  N T  W  HHS   TQ++PC
Sbjct: 218 VQTDQYGHHNSGYNNYHAATNNNNNNGT-PWAHHHS---TQRVPC 244

BLAST of Cp4.1LG01g07010 vs. Swiss-Prot
Match: GAT19_ARATH (GATA transcription factor 19 OS=Arabidopsis thaliana GN=GATA19 PE=2 SV=2)

HSP 1 Score: 130.6 bits (327), Expect = 2.3e-29
Identity = 91/199 (45.73%), Postives = 111/199 (55.78%), Query Frame = 1

Query: 42  SSSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSA 101
           S  SS  +SVDCTLSLGTPSTR    D ++R +  H   + G       WD L+   K  
Sbjct: 14  SHHSSPYASVDCTLSLGTPSTRLCNEDDERRFSS-HTSDTIG-------WDFLNGSKKGG 73

Query: 102 GRSTASNAAAVPSSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAA 161
           G             G  LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA+
Sbjct: 74  G-----------GGGHNLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAS 133

Query: 162 ATVNCTA---TTMAAESNNHHHLHQHHQMFNGNYTNSTATWVPHHSPVATQKLPCLSAAA 221
              N T+   +T A      H    ++   N N   S++ W   H+   TQ++P  S A 
Sbjct: 134 TARNSTSGGGSTAAGVPTLDHQASANYYYNNNNQYASSSPWHHQHN---TQRVPYYSPA- 186

Query: 222 INNESMFIGNDDVRRTEQE 238
            NNE  ++  DDVR  + +
Sbjct: 194 -NNEYSYV--DDVRVVDHD 186

BLAST of Cp4.1LG01g07010 vs. Swiss-Prot
Match: GAT20_ARATH (GATA transcription factor 20 OS=Arabidopsis thaliana GN=GATA20 PE=2 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 1.3e-24
Identity = 88/213 (41.31%), Postives = 113/213 (53.05%), Query Frame = 1

Query: 13  SSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSPSSVDCTLSLGTPSTRSSEFDSDKR 72
           S+FS+F S  N     H        NY   ++ SS +SVDCTLSLGTPSTR  +      
Sbjct: 8   SNFSMFFSSENDDQNHH--------NYDPYNNFSSSTSVDCTLSLGTPSTRLDD------ 67

Query: 73  AAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSSGDPLLARRCANCDTTST 132
               HHR S+ +  +N   D     H    ++++     V  S    L RRCA+CDTTST
Sbjct: 68  ----HHRFSSAN-SNNISGDFY--IHGGNAKTSSYKKGGVAHS----LPRRCASCDTTST 127

Query: 133 PLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTAT---TMAAE----------SNNHH 192
           PLWRNGP+GPKSLCNACGIRFKKEERRA A  N T +   + AAE           N + 
Sbjct: 128 PLWRNGPKGPKSLCNACGIRFKKEERRATAR-NLTISGGGSSAAEVPVENSYNGGGNYYS 187

Query: 193 HLHQHHQMFNGNYTNSTATWVPHHSPVATQKLP 213
           H H H+   + ++ +     VP+ SPV   + P
Sbjct: 188 HHHHHYASSSPSWAHQNTQRVPYFSPVPEMEYP 194

BLAST of Cp4.1LG01g07010 vs. Swiss-Prot
Match: GAT22_ARATH (Putative GATA transcription factor 22 OS=Arabidopsis thaliana GN=GATA22 PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 9.9e-12
Identity = 38/89 (42.70%), Postives = 52/89 (58.43%), Query Frame = 1

Query: 104 STASNAAAVPSSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAT 163
           S  SN+       +  + R C++C+TT TPLWR+GPRGPKSLCNACGIR +K  R A AT
Sbjct: 181 SNLSNSERQNGYNNDCVIRICSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMAT 240

Query: 164 VNCTATTMAAESNNHHHLHQHHQMFNGNY 193
              TA +  +       +   +++ NG Y
Sbjct: 241 ATATAVSGVSPPVMKKKMQNKNKISNGVY 269

BLAST of Cp4.1LG01g07010 vs. Swiss-Prot
Match: GAT21_ARATH (GATA transcription factor 21 OS=Arabidopsis thaliana GN=GATA21 PE=1 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 2.7e-09
Identity = 35/92 (38.04%), Postives = 47/92 (51.09%), Query Frame = 1

Query: 122 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATTMAAESNNHHHL 181
           R C++C+TT TPLWR+GPRGPKSLCNACGIR +K  R A A          A +     L
Sbjct: 230 RVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMAAAAAAGDQEVAVAPRVQQL 289

Query: 182 HQHHQMFNGNYTNSTATWVPHHSPVATQKLPC 214
               ++ N    ++      H  P+  +   C
Sbjct: 290 PLKKKLQNKKKRSNGGEKYNHSPPMVAKAKKC 321

BLAST of Cp4.1LG01g07010 vs. TrEMBL
Match: A0A0A0KY15_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G046650 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.5e-78
Identity = 177/252 (70.24%), Postives = 189/252 (75.00%), Query Frame = 1

Query: 1   MMHHCGGAGG-AASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSPSSVDCTLSLGT 60
           MMHH GG GG +ASSFSVFLSVPNHG A     D+YS++   +SSSSSPSSVDCTLSLGT
Sbjct: 1   MMHHYGGGGGGSASSFSVFLSVPNHGAA-----DMYSSSTNYASSSSSPSSVDCTLSLGT 60

Query: 61  PSTRSSEFDSDKRAAP----RHHRRSAGSYVSNFCWDLLHPKHKSAGRST----ASNA-- 120
           PSTRSSEFD DKRAA      HHRRSAGSYVSNFCWDLLHPKHK++GR      ASN   
Sbjct: 61  PSTRSSEFDGDKRAAAAAARNHHRRSAGSYVSNFCWDLLHPKHKTSGRGGGGGGASNNNI 120

Query: 121 -AAVPSSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTA 180
            AAV + GDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAA    T 
Sbjct: 121 NAAVSNGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAA---ATV 180

Query: 181 TTMAAESNNHHHLHQHHQMFNGNYTNSTATWVPHHSPVATQKLPCLSAAAINNESMFIGN 240
            +  AESN+HHH H HH MFNG+YTNS  TWVP   P  TQK PCLSAA        IGN
Sbjct: 181 NSSVAESNHHHH-HHHHPMFNGSYTNSN-TWVPQQLPATTQKHPCLSAA--------IGN 231

BLAST of Cp4.1LG01g07010 vs. TrEMBL
Match: A5C2I6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009032 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 3.1e-44
Identity = 119/232 (51.29%), Postives = 141/232 (60.78%), Query Frame = 1

Query: 5   CGGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSPSSVDCTLSLGTPSTRS 64
           CG     ++SFS+  S+PNH     D  D+Y        +SSS SSVDCTLSLGTPSTR 
Sbjct: 92  CGLFHNQSNSFSMLFSMPNH--KPFDETDMYP------FTSSSSSSVDCTLSLGTPSTRL 151

Query: 65  SEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAG------RSTASNAAAVPSSGDP 124
           ++ D  +     HH R AGS VSNFCWD+L  KH  +       R  +S +++  S+GDP
Sbjct: 152 TDNDEKRM----HHDRRAGSCVSNFCWDILQXKHTPSAPTHKPSRGGSSGSSSNNSAGDP 211

Query: 125 LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATTMAAESNNH 184
           LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA A    T  T       H
Sbjct: 212 LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAAAATTGATAGVMEPQH 271

Query: 185 HHLHQHHQMFNGNYTNSTATWVPHHSPVATQKLPCLSAAAINNESMFIGNDD 231
             +  H+            +WV HHS   TQK+PCLS  A+ NE  FI +DD
Sbjct: 272 IMISHHNN-----------SWV-HHS--QTQKMPCLS-PAMGNEFRFIEDDD 296

BLAST of Cp4.1LG01g07010 vs. TrEMBL
Match: F6GWW1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g01840 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 4.4e-43
Identity = 117/226 (51.77%), Postives = 137/226 (60.62%), Query Frame = 1

Query: 5   CGGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSPSSVDCTLSLGTPSTRS 64
           CG     ++SFS+  S+PNH     D  D+Y        +SSS SSVDCTLSLGTPSTR 
Sbjct: 7   CGLFHNQSNSFSMLFSMPNH--KPFDETDMYP------FTSSSSSSVDCTLSLGTPSTRL 66

Query: 65  SEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSSGDPLLARRC 124
           ++ D  +     HH R AGS VSNFCWD+LH           S +++  S+GDPLLARRC
Sbjct: 67  TDNDEKRM----HHDRRAGSCVSNFCWDILH-----------SGSSSNNSAGDPLLARRC 126

Query: 125 ANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATTMAAESNNHHHLHQH 184
           ANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA A    T  T       H  +  H
Sbjct: 127 ANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAAAATTGATAGVMEPQHIMISHH 186

Query: 185 HQMFNGNYTNSTATWVPHHSPVATQKLPCLSAAAINNESMFIGNDD 231
           +            +WV HHS   TQK+PCLS  A+ NE  FI +DD
Sbjct: 187 NN-----------SWV-HHS--QTQKMPCLS-PAMGNEFRFIEDDD 194

BLAST of Cp4.1LG01g07010 vs. TrEMBL
Match: M5VSX0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014930mg PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.9e-42
Identity = 122/256 (47.66%), Postives = 150/256 (58.59%), Query Frame = 1

Query: 13  SSFSVFLSVPNHGGAAHDMMDIYSNNYASSSS---------SSSPSSVDCTLSLGTPSTR 72
           SSFS+  S+PNH    H   D + +++  +           +SS SSVDCTLSLGTPSTR
Sbjct: 28  SSFSMLFSMPNH----HKPYDHHHHHHHETQHDHHNHMYPFASSSSSVDCTLSLGTPSTR 87

Query: 73  SSEFD---SDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASN------------ 132
            +E D    DKR   R+ RRS    VSNFCWDLL PKH +   +++ +            
Sbjct: 88  LTENDVVLDDKRT--RNERRS----VSNFCWDLLQPKHHATSATSSHHHKNGSHRSGGNG 147

Query: 133 ---AAAVPSSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA-AATV 192
              + AV S+ DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA AA  
Sbjct: 148 NGVSNAVHSNNDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAAAA 207

Query: 193 NCTATTMAAESNNHHHLHQHHQMFNGNYTNSTATWVPHHSPVATQKLPCLSAAAINNESM 241
           N  ++++    +N H L QHH      + NS   W+PH     TQK+PC S  A+ NE  
Sbjct: 208 NGGSSSVVGMDHNSHMLSQHH------HNNS---WMPHSQ---TQKMPCFS-PAMGNEFR 260

BLAST of Cp4.1LG01g07010 vs. TrEMBL
Match: A0A061DFR9_THECC (GATA type zinc finger transcription factor family protein OS=Theobroma cacao GN=TCM_000376 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 5.4e-41
Identity = 125/250 (50.00%), Postives = 146/250 (58.40%), Query Frame = 1

Query: 1   MMHHCGGAGG-------------AASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSS 60
           MMH C  + G              ++SFS+  S+PN    + D  D+Y+  Y SSSSSSS
Sbjct: 1   MMHRCSSSQGNMVGPCSCGLFHNQSNSFSMLFSMPNPH-KSFDETDMYA--YTSSSSSSS 60

Query: 61  PSSVDCTLSLGTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHK-------S 120
              VDCTLSLGTPSTR  E D DKR   RH RRS GS +SNFCWDLL  K+         
Sbjct: 61  ---VDCTLSLGTPSTRLCE-DDDKRI--RHDRRS-GSCMSNFCWDLLQNKNAPYSQQTPK 120

Query: 121 AGRSTASNAAAVPSSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA 180
           A R ++ N+++  S  DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA
Sbjct: 121 ASRGSSGNSSS-SSGNDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA 180

Query: 181 AATVNCTATTMAAESNNHHHLHQHHQMFNGNYTNSTATWVPHHSPVATQKLPCLSAAAIN 231
            A  N +  T +     HH  H +             +WV HHS    QK+PC S     
Sbjct: 181 TANANNSGATASMLEQQHHGYHNN-------------SWV-HHS--QNQKMPCFSPV--- 220

BLAST of Cp4.1LG01g07010 vs. TAIR10
Match: AT3G50870.1 (AT3G50870.1 GATA type zinc finger transcription factor family protein)

HSP 1 Score: 142.5 bits (358), Expect = 3.4e-34
Identity = 102/225 (45.33%), Postives = 123/225 (54.67%), Query Frame = 1

Query: 12  ASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSPSSVDCTLSLGTPSTRSSEFDSDK 71
           A S+S+  S+ N G        ++  N      SSS   VDCTLSLGTPSTR  E D  +
Sbjct: 38  AGSYSMVFSMQNGG--------VFEQNGEDYHHSSS--LVDCTLSLGTPSTRLCEEDEKR 97

Query: 72  RAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASN----AAAVPS------------- 131
           R   R     A S +SNF WDL+H K+ ++  +  +N    +A  PS             
Sbjct: 98  R---RSTSSGASSCISNF-WDLIHTKNNNSKTAPYNNVPSFSANKPSRGCSGGGGGGGGG 157

Query: 132 -SGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCT---ATT 191
             GD LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERR  A    T   A  
Sbjct: 158 GGGDSLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRTTAATGNTVVGAAP 217

Query: 192 MAAESNNHHH--LHQHHQMFNGNYTNSTATWVPHHSPVATQKLPC 214
           +  +   HH+   + +H   N N  N T  W  HHS   TQ++PC
Sbjct: 218 VQTDQYGHHNSGYNNYHAATNNNNNNGT-PWAHHHS---TQRVPC 244

BLAST of Cp4.1LG01g07010 vs. TAIR10
Match: AT4G36620.1 (AT4G36620.1 GATA transcription factor 19)

HSP 1 Score: 130.6 bits (327), Expect = 1.3e-30
Identity = 91/199 (45.73%), Postives = 111/199 (55.78%), Query Frame = 1

Query: 42  SSSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSA 101
           S  SS  +SVDCTLSLGTPSTR    D ++R +  H   + G       WD L+   K  
Sbjct: 14  SHHSSPYASVDCTLSLGTPSTRLCNEDDERRFSS-HTSDTIG-------WDFLNGSKKGG 73

Query: 102 GRSTASNAAAVPSSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAA 161
           G             G  LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA+
Sbjct: 74  G-----------GGGHNLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAS 133

Query: 162 ATVNCTA---TTMAAESNNHHHLHQHHQMFNGNYTNSTATWVPHHSPVATQKLPCLSAAA 221
              N T+   +T A      H    ++   N N   S++ W   H+   TQ++P  S A 
Sbjct: 134 TARNSTSGGGSTAAGVPTLDHQASANYYYNNNNQYASSSPWHHQHN---TQRVPYYSPA- 186

Query: 222 INNESMFIGNDDVRRTEQE 238
            NNE  ++  DDVR  + +
Sbjct: 194 -NNEYSYV--DDVRVVDHD 186

BLAST of Cp4.1LG01g07010 vs. TAIR10
Match: AT2G18380.1 (AT2G18380.1 GATA transcription factor 20)

HSP 1 Score: 114.8 bits (286), Expect = 7.5e-26
Identity = 88/213 (41.31%), Postives = 113/213 (53.05%), Query Frame = 1

Query: 13  SSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSPSSVDCTLSLGTPSTRSSEFDSDKR 72
           S+FS+F S  N     H        NY   ++ SS +SVDCTLSLGTPSTR  +      
Sbjct: 8   SNFSMFFSSENDDQNHH--------NYDPYNNFSSSTSVDCTLSLGTPSTRLDD------ 67

Query: 73  AAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSSGDPLLARRCANCDTTST 132
               HHR S+ +  +N   D     H    ++++     V  S    L RRCA+CDTTST
Sbjct: 68  ----HHRFSSAN-SNNISGDFY--IHGGNAKTSSYKKGGVAHS----LPRRCASCDTTST 127

Query: 133 PLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTAT---TMAAE----------SNNHH 192
           PLWRNGP+GPKSLCNACGIRFKKEERRA A  N T +   + AAE           N + 
Sbjct: 128 PLWRNGPKGPKSLCNACGIRFKKEERRATAR-NLTISGGGSSAAEVPVENSYNGGGNYYS 187

Query: 193 HLHQHHQMFNGNYTNSTATWVPHHSPVATQKLP 213
           H H H+   + ++ +     VP+ SPV   + P
Sbjct: 188 HHHHHYASSSPSWAHQNTQRVPYFSPVPEMEYP 194

BLAST of Cp4.1LG01g07010 vs. TAIR10
Match: AT4G26150.1 (AT4G26150.1 cytokinin-responsive gata factor 1)

HSP 1 Score: 72.0 bits (175), Expect = 5.6e-13
Identity = 38/89 (42.70%), Postives = 52/89 (58.43%), Query Frame = 1

Query: 104 STASNAAAVPSSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAT 163
           S  SN+       +  + R C++C+TT TPLWR+GPRGPKSLCNACGIR +K  R A AT
Sbjct: 181 SNLSNSERQNGYNNDCVIRICSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMAT 240

Query: 164 VNCTATTMAAESNNHHHLHQHHQMFNGNY 193
              TA +  +       +   +++ NG Y
Sbjct: 241 ATATAVSGVSPPVMKKKMQNKNKISNGVY 269

BLAST of Cp4.1LG01g07010 vs. TAIR10
Match: AT5G56860.1 (AT5G56860.1 GATA type zinc finger transcription factor family protein)

HSP 1 Score: 63.9 bits (154), Expect = 1.5e-10
Identity = 35/92 (38.04%), Postives = 47/92 (51.09%), Query Frame = 1

Query: 122 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATTMAAESNNHHHL 181
           R C++C+TT TPLWR+GPRGPKSLCNACGIR +K  R A A          A +     L
Sbjct: 230 RVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMAAAAAAGDQEVAVAPRVQQL 289

Query: 182 HQHHQMFNGNYTNSTATWVPHHSPVATQKLPC 214
               ++ N    ++      H  P+  +   C
Sbjct: 290 PLKKKLQNKKKRSNGGEKYNHSPPMVAKAKKC 321

BLAST of Cp4.1LG01g07010 vs. NCBI nr
Match: gi|778690730|ref|XP_004146553.2| (PREDICTED: GATA transcription factor 18-like [Cucumis sativus])

HSP 1 Score: 300.8 bits (769), Expect = 2.1e-78
Identity = 177/252 (70.24%), Postives = 189/252 (75.00%), Query Frame = 1

Query: 1   MMHHCGGAGG-AASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSPSSVDCTLSLGT 60
           MMHH GG GG +ASSFSVFLSVPNHG A     D+YS++   +SSSSSPSSVDCTLSLGT
Sbjct: 1   MMHHYGGGGGGSASSFSVFLSVPNHGAA-----DMYSSSTNYASSSSSPSSVDCTLSLGT 60

Query: 61  PSTRSSEFDSDKRAAP----RHHRRSAGSYVSNFCWDLLHPKHKSAGRST----ASNA-- 120
           PSTRSSEFD DKRAA      HHRRSAGSYVSNFCWDLLHPKHK++GR      ASN   
Sbjct: 61  PSTRSSEFDGDKRAAAAAARNHHRRSAGSYVSNFCWDLLHPKHKTSGRGGGGGGASNNNI 120

Query: 121 -AAVPSSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTA 180
            AAV + GDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAA    T 
Sbjct: 121 NAAVSNGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAA---ATV 180

Query: 181 TTMAAESNNHHHLHQHHQMFNGNYTNSTATWVPHHSPVATQKLPCLSAAAINNESMFIGN 240
            +  AESN+HHH H HH MFNG+YTNS  TWVP   P  TQK PCLSAA        IGN
Sbjct: 181 NSSVAESNHHHH-HHHHPMFNGSYTNSN-TWVPQQLPATTQKHPCLSAA--------IGN 231

BLAST of Cp4.1LG01g07010 vs. NCBI nr
Match: gi|659102361|ref|XP_008452087.1| (PREDICTED: GATA transcription factor 18-like [Cucumis melo])

HSP 1 Score: 298.1 bits (762), Expect = 1.4e-77
Identity = 181/255 (70.98%), Postives = 192/255 (75.29%), Query Frame = 1

Query: 1   MMHHCGGAGGA----ASSFSVFLSVPNHGGAAHDMMDIYSN--NYASSSSSSS--PSSVD 60
           MMHH GG GG     ASSFS+FLSVPNHG A     D+YS+  NYASSSSSSS  PSSVD
Sbjct: 1   MMHHYGGGGGGGGGGASSFSLFLSVPNHGAA-----DMYSSSTNYASSSSSSSSSPSSVD 60

Query: 61  CTLSLGTPSTRSSEFDSDKRAAPRH-HRRSAGSYVSNFCWDLLHPKHKSAGRST---ASN 120
           CTLSLGTPSTRSSEFDSDKRAA R+ HRRSAGSYVSNFCWDLLHPKHK++GR     ASN
Sbjct: 61  CTLSLGTPSTRSSEFDSDKRAAARNPHRRSAGSYVSNFCWDLLHPKHKTSGRGAGGAASN 120

Query: 121 ---AAAVPSSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVN 180
               AAV +SGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAA   
Sbjct: 121 NNITAAVSNSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAA-- 180

Query: 181 CTATTMAAESNNHHHLHQHHQMFNGNYTNSTATWVPHHSPVATQKLPCLSAAAINNESMF 240
            T  +  AESN+HHH      MFNG+YTNS+ TWVP   P  TQK PCLSAA        
Sbjct: 181 -TVNSSTAESNHHHH-----SMFNGSYTNSS-TWVPQQLPATTQKHPCLSAA-------- 230

BLAST of Cp4.1LG01g07010 vs. NCBI nr
Match: gi|147792212|emb|CAN72981.1| (hypothetical protein VITISV_009032 [Vitis vinifera])

HSP 1 Score: 186.8 bits (473), Expect = 4.4e-44
Identity = 119/232 (51.29%), Postives = 141/232 (60.78%), Query Frame = 1

Query: 5   CGGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSPSSVDCTLSLGTPSTRS 64
           CG     ++SFS+  S+PNH     D  D+Y        +SSS SSVDCTLSLGTPSTR 
Sbjct: 92  CGLFHNQSNSFSMLFSMPNH--KPFDETDMYP------FTSSSSSSVDCTLSLGTPSTRL 151

Query: 65  SEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAG------RSTASNAAAVPSSGDP 124
           ++ D  +     HH R AGS VSNFCWD+L  KH  +       R  +S +++  S+GDP
Sbjct: 152 TDNDEKRM----HHDRRAGSCVSNFCWDILQXKHTPSAPTHKPSRGGSSGSSSNNSAGDP 211

Query: 125 LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATTMAAESNNH 184
           LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA A    T  T       H
Sbjct: 212 LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAAAATTGATAGVMEPQH 271

Query: 185 HHLHQHHQMFNGNYTNSTATWVPHHSPVATQKLPCLSAAAINNESMFIGNDD 231
             +  H+            +WV HHS   TQK+PCLS  A+ NE  FI +DD
Sbjct: 272 IMISHHNN-----------SWV-HHS--QTQKMPCLS-PAMGNEFRFIEDDD 296

BLAST of Cp4.1LG01g07010 vs. NCBI nr
Match: gi|731387122|ref|XP_010649139.1| (PREDICTED: GATA transcription factor 18-like [Vitis vinifera])

HSP 1 Score: 186.8 bits (473), Expect = 4.4e-44
Identity = 119/232 (51.29%), Postives = 141/232 (60.78%), Query Frame = 1

Query: 5   CGGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSPSSVDCTLSLGTPSTRS 64
           CG     ++SFS+  S+PNH     D  D+Y        +SSS SSVDCTLSLGTPSTR 
Sbjct: 17  CGLFHNQSNSFSMLFSMPNH--KPFDETDMYP------FTSSSSSSVDCTLSLGTPSTRL 76

Query: 65  SEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAG------RSTASNAAAVPSSGDP 124
           ++ D  +     HH R AGS VSNFCWD+L  KH  +       R  +S +++  S+GDP
Sbjct: 77  TDNDEKRM----HHDRRAGSCVSNFCWDILQSKHTPSAPTHKPSRGGSSGSSSNNSAGDP 136

Query: 125 LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATTMAAESNNH 184
           LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA A    T  T       H
Sbjct: 137 LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAAAATTGATAGVMEPQH 196

Query: 185 HHLHQHHQMFNGNYTNSTATWVPHHSPVATQKLPCLSAAAINNESMFIGNDD 231
             +  H+            +WV HHS   TQK+PCLS  A+ NE  FI +DD
Sbjct: 197 IMISHHNN-----------SWV-HHS--QTQKMPCLS-PAMGNEFRFIEDDD 221

BLAST of Cp4.1LG01g07010 vs. NCBI nr
Match: gi|297735150|emb|CBI17512.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 183.0 bits (463), Expect = 6.4e-43
Identity = 117/226 (51.77%), Postives = 137/226 (60.62%), Query Frame = 1

Query: 5   CGGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSPSSVDCTLSLGTPSTRS 64
           CG     ++SFS+  S+PNH     D  D+Y        +SSS SSVDCTLSLGTPSTR 
Sbjct: 17  CGLFHNQSNSFSMLFSMPNH--KPFDETDMYP------FTSSSSSSVDCTLSLGTPSTRL 76

Query: 65  SEFDSDKRAAPRHHRRSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSSGDPLLARRC 124
           ++ D  +     HH R AGS VSNFCWD+LH           S +++  S+GDPLLARRC
Sbjct: 77  TDNDEKRM----HHDRRAGSCVSNFCWDILH-----------SGSSSNNSAGDPLLARRC 136

Query: 125 ANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATTMAAESNNHHHLHQH 184
           ANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA A    T  T       H  +  H
Sbjct: 137 ANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAAAATTGATAGVMEPQHIMISHH 196

Query: 185 HQMFNGNYTNSTATWVPHHSPVATQKLPCLSAAAINNESMFIGNDD 231
           +            +WV HHS   TQK+PCLS  A+ NE  FI +DD
Sbjct: 197 NN-----------SWV-HHS--QTQKMPCLS-PAMGNEFRFIEDDD 204

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
GAT18_ARATH6.0e-3345.33GATA transcription factor 18 OS=Arabidopsis thaliana GN=GATA18 PE=2 SV=2[more]
GAT19_ARATH2.3e-2945.73GATA transcription factor 19 OS=Arabidopsis thaliana GN=GATA19 PE=2 SV=2[more]
GAT20_ARATH1.3e-2441.31GATA transcription factor 20 OS=Arabidopsis thaliana GN=GATA20 PE=2 SV=2[more]
GAT22_ARATH9.9e-1242.70Putative GATA transcription factor 22 OS=Arabidopsis thaliana GN=GATA22 PE=3 SV=... [more]
GAT21_ARATH2.7e-0938.04GATA transcription factor 21 OS=Arabidopsis thaliana GN=GATA21 PE=1 SV=2[more]
Match NameE-valueIdentityDescription
A0A0A0KY15_CUCSA1.5e-7870.24Uncharacterized protein OS=Cucumis sativus GN=Csa_4G046650 PE=4 SV=1[more]
A5C2I6_VITVI3.1e-4451.29Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009032 PE=4 SV=1[more]
F6GWW1_VITVI4.4e-4351.77Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g01840 PE=4 SV=... [more]
M5VSX0_PRUPE2.9e-4247.66Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014930mg PE=4 SV=1[more]
A0A061DFR9_THECC5.4e-4150.00GATA type zinc finger transcription factor family protein OS=Theobroma cacao GN=... [more]
Match NameE-valueIdentityDescription
AT3G50870.13.4e-3445.33 GATA type zinc finger transcription factor family protein[more]
AT4G36620.11.3e-3045.73 GATA transcription factor 19[more]
AT2G18380.17.5e-2641.31 GATA transcription factor 20[more]
AT4G26150.15.6e-1342.70 cytokinin-responsive gata factor 1[more]
AT5G56860.11.5e-1038.04 GATA type zinc finger transcription factor family protein[more]
Match NameE-valueIdentityDescription
gi|778690730|ref|XP_004146553.2|2.1e-7870.24PREDICTED: GATA transcription factor 18-like [Cucumis sativus][more]
gi|659102361|ref|XP_008452087.1|1.4e-7770.98PREDICTED: GATA transcription factor 18-like [Cucumis melo][more]
gi|147792212|emb|CAN72981.1|4.4e-4451.29hypothetical protein VITISV_009032 [Vitis vinifera][more]
gi|731387122|ref|XP_010649139.1|4.4e-4451.29PREDICTED: GATA transcription factor 18-like [Vitis vinifera][more]
gi|297735150|emb|CBI17512.3|6.4e-4351.77unnamed protein product [Vitis vinifera][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
GO:0008270zinc ion binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR013088Znf_NHR/GATA
IPR000679Znf_GATA
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g07010.1Cp4.1LG01g07010.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000679Zinc finger, GATA-typePFAMPF00320GATAcoord: 124..158
score: 5.4
IPR000679Zinc finger, GATA-typeSMARTSM00401GATA_3coord: 118..170
score: 4.9
IPR000679Zinc finger, GATA-typePROSITEPS00344GATA_ZN_FINGER_1coord: 124..149
scor
IPR000679Zinc finger, GATA-typePROFILEPS50114GATA_ZN_FINGER_2coord: 118..154
score: 1
IPR013088Zinc finger, NHR/GATA-typeGENE3DG3DSA:3.30.50.10coord: 122..158
score: 4.6
NoneNo IPR availablePANTHERPTHR10071TRANSCRIPTION FACTOR GATA GATA BINDING FACTORcoord: 12..163
score: 3.7
NoneNo IPR availablePANTHERPTHR10071:SF156GATA TRANSCRIPTION FACTOR 18-RELATEDcoord: 12..163
score: 3.7
NoneNo IPR availableunknownSSF57716Glucocorticoid receptor-like (DNA-binding domain)coord: 121..159
score: 4.37

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g07010Cp4.1LG10g00610Cucurbita pepo (Zucchini)cpecpeB073