Cucsa.106490 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.106490
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionGATA transcription factor, putative
Locationscaffold00930 : 87853 .. 89376 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGCACCACTACGGCGGCGGAGGCGGCGGCAGCGCCTCTTCCTTTTCCGTCTTCTTATCTGTCCCAAACCACGGCGCTGCCGATATGTATTCTTCTTCTACTAATTACGCCTCTTCCTCTTCCTCTCCTTCTTCTGTTGATTGTACGCTTTCTCTCGGTACTCCTTCCACGCGCTCATCCGAATTTGACGGTGATAAACGCGCCGCCGCCGCCGCTGCACGTAATCACCACCGCCGTTCCGCTGGTTCTTATGTCTCTAATTTCTGTTGGGATTTGTTGCATCCTAAGCATAAGACTTCTGGCCGTGGTGGCGGCGGCGGCGGTGCTTCTAATAATAATATAAATGCCGCCGTGAGTAACGGTGGCGATCCGCTTCTTGCTCGGCGTTGCGCTAACTGTGATACTACTTCCACTCCCCTCTGGCGAAATGGGCCTAGAGGCCCAAAGGTAAATCAATATACCATAATGAACTAATATATTAATAACTACACATTAAAACTATAATATCCACCGTAGATTATTATTGATTAAACACTTGTATTTACTTATTATTTTCGTGCATGGAAGATCTTAGTATTACTTATTTTTTtCAATAAATAGATTTGAACCCATTAAAAAaAATATGGGATTTCCATCTCAAAAGTAATCAATATAATGTGATGGCGAGATCTCTTTACTAGATTTTCAAAGTTATTTTCGAGTATGTATTTTTCATCAAACATATTTAATTACTCAAAATTAATTTATATTCTAAAAAGTAATTCGTATATTTTGAATCGTTAAAGGTATATTAATTCAAAATATGACAGTAATTACACTTTCAAAATAAACTTGTAGACTAGCTTAATTTTAGTGTTGTCACGTCTATTATCACTCAAAACCATTATTGGTAATCTTTCTAAAATTAAATGGGATAATATCAATGTTGTATTGACCAATGTTAAGATGGTTTTGAAGCGCAATTAATTATATTGATTAACACATTGGAATCAGACATTTGAATCTCGAGTAGATTTATATAATCAATGTCATGTTCTCTTTTTCTCCCTTTTTGGAAAGGAAACAAATTCTTTTGTTATTATTATTGTTTTAATTTTTATACTCTTAACTTCAAAATACAAATTCAAAACATTCGAGTATTTGTTTTTATTTAATAACACATTATTTGTTTGTGAATGAATTTCTGAGTACAGTCGCTATGTAATGCGTGTGGGATTCGATTCAAAAAGGAAGAGCGAAGAGCGGCGGCGGCGACGGTGAACAGCTCGGTGGCAGAATCAAACCACCACCACCACCACCACCATCACCCAATGTTCAACGGAAGTTATACAAATTCAAATACCTGGGTTCCACAGCAGTTGCCGGCAACAACTCAGAAACATCCTTGCCTGTCGGCTGCCATAGGAAACGAGGACGTTGGACCGGAAAATGGGATTTCGTTTCTGTCTTGGCGGCTTAACGTTGCTAATACCGATCACCGGCCCACTCTCGTCCATGATTTCACAAGATGAGTCAACAACA

mRNA sequence

ATGATGCACCACTACGGCGGCGGAGGCGGCGGCAGCGCCTCTTCCTTTTCCGTCTTCTTATCTGTCCCAAACCACGGCGCTGCCGATATGTAttcttcttctactaattacgcctcttcctcttcctctccttcttctGTTGATTGTACGCTTTCTCTCGGTACTCCTTCCACGCGCTCATCCGAATTTGACGGTGATAAACGCGCCGCCGCCGCCGCTGCACGTAATCACCACCGCCGTTCCGCTGGTTCTTATGTCTCTAATTTCTGTTGGGATTTGTTGCATCCTAAGCATAAGACTTCTGGCCGTGGTGGCGGCGGCGGCGGTGCTTCTAATAATAATATAAATGCCGCCGTGAGTAACGGTGGCGATCCGCTTCTTGCTCGGCGTTGCGCTAACTGTGATACTACTTCCACTCCCCTCTGGCGAAATGGGCCTAGAGGCCCAAAGTCGCTATGTAATGCGTGTGGGATTCGATTCAAAAAGGAAGAGCGAAGAGCGGCGGCGGCGACGGTGAACAGCTCGGTGGCAGAATCAAaccaccaccaccaccaccaccatcaccCAATGTTCAACGGAAGTTATACAAATTCAAATACCTGGGTTCCACAGCAGTTGCCGGCAACAACTCAGAAACATCCTTGCCTGTCGGCTGCCATAGGAAACGAGGACGTTGGACCGGAAAATGGGATTTCGTTTCTGTCTTGGCGGCTTAACGTTGCTAATACCGATCACCGGCCCACTCTCGTCCATGATTTCACAAGATGAGTCAACAACA

Coding sequence (CDS)

ATGATGCACCACTACGGCGGCGGAGGCGGCGGCAGCGCCTCTTCCTTTTCCGTCTTCTTATCTGTCCCAAACCACGGCGCTGCCGATATGTATTCTTCTTCTACTAATTACGCCTCTTCCTCTTCCTCTCCTTCTTCTGTTGATTGTACGCTTTCTCTCGGTACTCCTTCCACGCGCTCATCCGAATTTGACGGTGATAAACGCGCCGCCGCCGCCGCTGCACGTAATCACCACCGCCGTTCCGCTGGTTCTTATGTCTCTAATTTCTGTTGGGATTTGTTGCATCCTAAGCATAAGACTTCTGGCCGTGGTGGCGGCGGCGGCGGTGCTTCTAATAATAATATAAATGCCGCCGTGAGTAACGGTGGCGATCCGCTTCTTGCTCGGCGTTGCGCTAACTGTGATACTACTTCCACTCCCCTCTGGCGAAATGGGCCTAGAGGCCCAAAGTCGCTATGTAATGCGTGTGGGATTCGATTCAAAAAGGAAGAGCGAAGAGCGGCGGCGGCGACGGTGAACAGCTCGGTGGCAGAATCAAACCACCACCACCACCACCACCATCACCCAATGTTCAACGGAAGTTATACAAATTCAAATACCTGGGTTCCACAGCAGTTGCCGGCAACAACTCAGAAACATCCTTGCCTGTCGGCTGCCATAGGAAACGAGGACGTTGGACCGGAAAATGGGATTTCGTTTCTGTCTTGGCGGCTTAACGTTGCTAATACCGATCACCGGCCCACTCTCGTCCATGATTTCACAAGATGA

Protein sequence

MMHHYGGGGGGSASSFSVFLSVPNHGAADMYSSSTNYASSSSSPSSVDCTLSLGTPSTRSSEFDGDKRAAAAAARNHHRRSAGSYVSNFCWDLLHPKHKTSGRGGGGGGASNNNINAAVSNGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSSVAESNHHHHHHHHPMFNGSYTNSNTWVPQQLPATTQKHPCLSAAIGNEDVGPENGISFLSWRLNVANTDHRPTLVHDFTR*
Homology
[Close]
BLAST of Cucsa.106490 vs. Swiss-Prot
Match: GAT18_ARATH (GATA transcription factor 18 OS=Arabidopsis thaliana GN=GATA18 PE=2 SV=2)

HSP 1 Score: 194.1 bits (492), Expect = 1.8e-48
Identity = 126/305 (41.31%), Postives = 156/305 (51.15%), Query Frame = 1 

Query: 1   MMHH------YGGGGGGSASSFSVFLSVPNHGAADMYSSSTNYASSSSSPSSVDCTLSLG 60
           M HH      Y      +A S+S+  S+ N G  +      +++SS      VDCTLSLG
Sbjct: 20  MFHHHSQSCCYNNNNNSNAGSYSMVFSMQNGGVFEQNGEDYHHSSSL-----VDCTLSLG 79

Query: 61  TPSTRSSEFDGDKRAAAAAARNHHRRSAGSYVSNFCWDLLHPKHKTS------------- 120
           TPSTR  E D  +R + ++        A S +SNF WDL+H K+  S             
Sbjct: 80  TPSTRLCEEDEKRRRSTSSG-------ASSCISNF-WDLIHTKNNNSKTAPYNNVPSFSA 139

Query: 121 --------GRGGGGGGASNNNINAAVSNGGDPLLARRCANCDTTSTPLWRNGPRGPKSLC 180
                   G GGGGGG            GGD LLARRCANCDTTSTPLWRNGPRGPKSLC
Sbjct: 140 NKPSRGCSGGGGGGGGGG----------GGDSLLARRCANCDTTSTPLWRNGPRGPKSLC 199

Query: 181 NACGIRFKKEERRAAAATVNSSVA-------ESNHHH--HHHHHPMFNGSYTNSNTWVPQ 240
           NACGIRFKKEERR  AAT N+ V        +  HH+  ++++H   N +  N   W   
Sbjct: 200 NACGIRFKKEERRTTAATGNTVVGAAPVQTDQYGHHNSGYNNYHAATNNNNNNGTPWAHH 259

Query: 241 QLPATTQKHPC------------LSAAIGN--EDVGPENGISFLSWRLNVANTDHRPTLV 256
               +TQ+ PC              + + N  E  G   G+ FLSWRLNVA+   R +LV
Sbjct: 260 H---STQRVPCNYPANEIRFMDDYGSGVANNVESDGAHGGVPFLSWRLNVAD---RASLV 295

[Close]
BLAST of Cucsa.106490 vs. Swiss-Prot
Match: GAT19_ARATH (GATA transcription factor 19 OS=Arabidopsis thaliana GN=GATA19 PE=2 SV=2)

HSP 1 Score: 157.9 bits (398), Expect = 1.5e-37
Identity = 107/242 (44.21%), Postives = 130/242 (53.72%), Query Frame = 1 

Query: 30  MYSSSTNYASSSSSP-SSVDCTLSLGTPSTRSSEFDGDKRAAAAAARNHHRRSAGSYVSN 89
           M+ S  N  S  SSP +SVDCTLSLGTPSTR    D ++R ++     H   + G     
Sbjct: 5   MFFSPENDVSHHSSPYASVDCTLSLGTPSTRLCNEDDERRFSS-----HTSDTIG----- 64

Query: 90  FCWDLLHPKHKTSGRGGGGGGASNNNINAAVSNGGDPLLARRCANCDTTSTPLWRNGPRG 149
             WD L+   K    GGGGGG +              LLARRCANCDTTSTPLWRNGPRG
Sbjct: 65  --WDFLNGSKK----GGGGGGHN--------------LLARRCANCDTTSTPLWRNGPRG 124

Query: 150 PKSLCNACGIRFKKEERRAAAATVNSS--------VAESNHHHHHHHHPMFNGSYTNSNT 209
           PKSLCNACGIRFKKEERRA+ A  ++S        V   +H    +++   N  Y +S+ 
Sbjct: 125 PKSLCNACGIRFKKEERRASTARNSTSGGGSTAAGVPTLDHQASANYYYNNNNQYASSSP 184

Query: 210 W--------VPQQLPATTQKHPCLSAAIGNEDVGPENGISFLSWRLNVANTDHRPTLVHD 255
           W        VP   PA  +        + + DV  +    FLSWRLNVA+   R  LVHD
Sbjct: 185 WHHQHNTQRVPYYSPANNEYSYVDDVRVVDHDVTTD---PFLSWRLNVAD---RTGLVHD 210

[Close]
BLAST of Cucsa.106490 vs. Swiss-Prot
Match: GAT20_ARATH (GATA transcription factor 20 OS=Arabidopsis thaliana GN=GATA20 PE=2 SV=2)

HSP 1 Score: 131.0 bits (328), Expect = 1.9e-29
Identity = 92/241 (38.17%), Postives = 123/241 (51.04%), Query Frame = 1 

Query: 14  SSFSVFLSVPNHGAADMYSSSTNYASSSSSPSSVDCTLSLGTPSTRSSEFDGDKRAAAAA 73
           S+FS+F S  N    D    + +  ++ SS +SVDCTLSLGTPSTR              
Sbjct: 8   SNFSMFFSSEND---DQNHHNYDPYNNFSSSTSVDCTLSLGTPSTRLD------------ 67

Query: 74  ARNHHRRSAGSYVSNFCWDL-LHPKHKTSGRGGGGGGASNNNINAAVSNGGDPLLARRCA 133
             +HHR S+ +  +N   D  +H          GG   +++     V++     L RRCA
Sbjct: 68  --DHHRFSSANS-NNISGDFYIH----------GGNAKTSSYKKGGVAHS----LPRRCA 127

Query: 134 NCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATV-----NSSVAE--------- 193
           +CDTTSTPLWRNGP+GPKSLCNACGIRFKKEERRA A  +      SS AE         
Sbjct: 128 SCDTTSTPLWRNGPKGPKSLCNACGIRFKKEERRATARNLTISGGGSSAAEVPVENSYNG 187

Query: 194 --SNHHHHHHHHPMFNGSYTNSNTW-VPQQLPATTQKHPCLSAAIGNEDVGPENGISFLS 237
             + + HHHHH+   + S+ + NT  VP   P    ++P +     +         SF+S
Sbjct: 188 GGNYYSHHHHHYASSSPSWAHQNTQRVPYFSPVPEMEYPYVDNVTAS---------SFMS 207

[Close]
BLAST of Cucsa.106490 vs. Swiss-Prot
Match: GATA2_ARATH (GATA transcription factor 2 OS=Arabidopsis thaliana GN=GATA2 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 9.2e-16
Identity = 46/118 (38.98%), Postives = 56/118 (47.46%), Query Frame = 1 

Query: 96  PKHKTSGRGGGGGGASNNNINAAVSNGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNA 155
           PK + SG GGGGGG   ++ +     GG     RRC +C +  TP WR GP GPK+LCNA
Sbjct: 150 PKKEQSGGGGGGGGRHQSSSSETTEGGG----MRRCTHCASEKTPQWRTGPLGPKTLCNA 209

Query: 156 CGIRFKK----EERRAAAATVNSSVAESNHHH--------------------HHHHHP 190
           CG+RFK      E R A++        SN H                     HHHHHP
Sbjct: 210 CGVRFKSGRLVPEYRPASSPTFVLTQHSNSHRKVMELRRQKEVMRQPQQVQLHHHHHP 263

[Close]
BLAST of Cucsa.106490 vs. Swiss-Prot
Match: GAT22_ARATH (Putative GATA transcription factor 22 OS=Arabidopsis thaliana GN=GATA22 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.8e-12
Identity = 36/66 (54.55%), Postives = 49/66 (74.24%), Query Frame = 1 

Query: 111 SNNNINAAVSNG-GDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAA 170
           S+N  N+   NG  +  + R C++C+TT TPLWR+GPRGPKSLCNACGIR +++ RRAA 
Sbjct: 180 SSNLSNSERQNGYNNDCVIRICSDCNTTKTPLWRSGPRGPKSLCNACGIR-QRKARRAAM 239

Query: 171 ATVNSS 176
           AT  ++
Sbjct: 240 ATATAT 244

[Close]
BLAST of Cucsa.106490 vs. TrEMBL
Match: A0A0A0KY15_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G046650 PE=4 SV=1)

HSP 1 Score: 541.6 bits (1394), Expect = 5.2e-151
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 1 

Query: 1   MMHHYGGGGGGSASSFSVFLSVPNHGAADMYSSSTNYASSSSSPSSVDCTLSLGTPSTRS 60
           MMHHYGGGGGGSASSFSVFLSVPNHGAADMYSSSTNYASSSSSPSSVDCTLSLGTPSTRS
Sbjct: 1   MMHHYGGGGGGSASSFSVFLSVPNHGAADMYSSSTNYASSSSSPSSVDCTLSLGTPSTRS 60

Query: 61  SEFDGDKRAAAAAARNHHRRSAGSYVSNFCWDLLHPKHKTSGRGGGGGGASNNNINAAVS 120
           SEFDGDKRAAAAAARNHHRRSAGSYVSNFCWDLLHPKHKTSGRGGGGGGASNNNINAAVS
Sbjct: 61  SEFDGDKRAAAAAARNHHRRSAGSYVSNFCWDLLHPKHKTSGRGGGGGGASNNNINAAVS 120

Query: 121 NGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSSVAESN 180
           NGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSSVAESN
Sbjct: 121 NGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSSVAESN 180

Query: 181 HHHHHHHHPMFNGSYTNSNTWVPQQLPATTQKHPCLSAAIGNEDVGPENGISFLSWRLNV 240
           HHHHHHHHPMFNGSYTNSNTWVPQQLPATTQKHPCLSAAIGNEDVGPENGISFLSWRLNV
Sbjct: 181 HHHHHHHHPMFNGSYTNSNTWVPQQLPATTQKHPCLSAAIGNEDVGPENGISFLSWRLNV 240

Query: 241 ANTDHRPTLVHDFTR 256
           ANTDHRPTLVHDFTR
Sbjct: 241 ANTDHRPTLVHDFTR 255

[Close]
BLAST of Cucsa.106490 vs. TrEMBL
Match: A5C2I6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009032 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 8.0e-59
Identity = 140/260 (53.85%), Postives = 160/260 (61.54%), Query Frame = 1 

Query: 13  ASSFSVFLSVPNHGAADMYSSSTNYASSSSSPSSVDCTLSLGTPSTRSSEFDGDKRAAAA 72
           ++SFS+  S+PNH   D    +  Y  +SSS SSVDCTLSLGTPSTR +  D D++    
Sbjct: 99  SNSFSMLFSMPNHKPFD---ETDMYPFTSSSSSSVDCTLSLGTPSTRLT--DNDEK---- 158

Query: 73  AARNHHRRSAGSYVSNFCWDLLHPKHKTSG------RGGGGGGASNNNINAAVSNGGDPL 132
             R HH R AGS VSNFCWD+L  KH  S       RGG  G +SNN+        GDPL
Sbjct: 159 --RMHHDRRAGSCVSNFCWDILQXKHTPSAPTHKPSRGGSSGSSSNNS-------AGDPL 218

Query: 133 LARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAAT----VNSSVAESNHH 192
           LARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA AA       + V E  H 
Sbjct: 219 LARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAAAATTGATAGVMEPQHI 278

Query: 193 HHHHHHPMFNGSYTNSNTWVPQQLPATTQKHPCLSAAIGNE-------DVGPENGISFLS 252
              HH          +N+WV     + TQK PCLS A+GNE       D   + GI FLS
Sbjct: 279 MISHH----------NNSWVHH---SQTQKMPCLSPAMGNEFRFIEDDDRDSDTGIPFLS 324

Query: 253 WRLNVANTDHRPTLVHDFTR 256
           WRLNV +   RP+LVHDFTR
Sbjct: 339 WRLNVTD---RPSLVHDFTR 324

[Close]
BLAST of Cucsa.106490 vs. TrEMBL
Match: V4RVT5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026328mg PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 8.3e-56
Identity = 138/258 (53.49%), Postives = 163/258 (63.18%), Query Frame = 1 

Query: 13  ASSFSVFLSVPNHGAADMYSSSTNYASSSSSPSSVDCTLSLGTPSTRSSEFDGDKRAAAA 72
           ++SFS+  S+PNH +   Y  +  YA  S  PSSVDCTLSLGTPSTR SE D +KR    
Sbjct: 28  SNSFSMLFSMPNHKS---YDETDMYAFMS--PSSVDCTLSLGTPSTRLSE-DDEKRI--- 87

Query: 73  AARNHHRRSAGSYVSNFCWDLLHPK----------HKTSGRGGGGGGASNNNINAAVSNG 132
             R+  RRSA + +++FCWD LH K          HKTS     GG  S+N I++  S+G
Sbjct: 88  --RHDQRRSASNCMTDFCWDFLHTKNSPYNTAQQNHKTSR----GGNNSSNTISS--SSG 147

Query: 133 GDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSSVAESNHH 192
            DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA AA  NSS   S   
Sbjct: 148 NDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAANANSSNIASAAE 207

Query: 193 HHHHHHPMFNGSYTNSNTWVPQQLPATTQKHPCLSAA-----IGNEDVGPENGISFLSWR 252
             H ++         +N+WV  Q  A +QK PC S A     I + D   + G+ FLSWR
Sbjct: 208 QPHGYY---------NNSWVQVQ-QAQSQKMPCFSPANEFRFIEDSDQTSDTGVPFLSWR 255

Query: 253 LNVANTDHRPTLVHDFTR 256
           LNVA+   RP LVHDFTR
Sbjct: 268 LNVAD---RPGLVHDFTR 255

[Close]
BLAST of Cucsa.106490 vs. TrEMBL
Match: M5VSX0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014930mg PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 3.2e-55
Identity = 141/284 (49.65%), Postives = 161/284 (56.69%), Query Frame = 1 

Query: 12  SASSFSVFLSVPNHGAA-------------DMYSSSTNYASSSSSPSSVDCTLSLGTPST 71
           S SSFS+  S+PNH                D ++    +ASSSSS   VDCTLSLGTPST
Sbjct: 26  SNSSFSMLFSMPNHHKPYDHHHHHHHETQHDHHNHMYPFASSSSS---VDCTLSLGTPST 85

Query: 72  RSSEFD---GDKRAAAAAARNHHRRSAGSYVSNFCWDLLHPKHKTSG--------RGGGG 131
           R +E D    DKR      RN  R      VSNFCWDLL PKH  +          G   
Sbjct: 86  RLTENDVVLDDKRT-----RNERRS-----VSNFCWDLLQPKHHATSATSSHHHKNGSHR 145

Query: 132 GGASNNNINAAVSNGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA 191
            G + N ++ AV +  DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA
Sbjct: 146 SGGNGNGVSNAVHSNNDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA 205

Query: 192 AAATVN---SSVAESNHHHH---HHHHPMFNGSYTNSNTWVPQQLPATTQKHPCLSAAIG 251
            AA  N   SSV   +H+ H    HHH         +N+W+P    + TQK PC S A+G
Sbjct: 206 TAAAANGGSSSVVGMDHNSHMLSQHHH---------NNSWMPH---SQTQKMPCFSPAMG 265

Query: 252 NE----------DVGPENGISFLSWRLNVANTDHRPTLVHDFTR 256
           NE                GI FLSWRLNV +   RP+LVHDFTR
Sbjct: 266 NEFRFMEDDTAHHENDATGIPFLSWRLNVTD---RPSLVHDFTR 281

[Close]
BLAST of Cucsa.106490 vs. TrEMBL
Match: B9HF07_POPTR (MONOPOLE family protein OS=Populus trichocarpa GN=POPTR_0007s12930g PE=4 SV=2)

HSP 1 Score: 212.6 bits (540), Expect = 5.6e-52
Identity = 130/260 (50.00%), Postives = 152/260 (58.46%), Query Frame = 1 

Query: 13  ASSFSVFLSVPNHGAADMYSSSTNYASSSSSPSSVDCTLSLGTPSTRSSEFDGDKRAAAA 72
           ++SFS+  S+PNH  +  +  +  Y  +S S SSVDCTLSLGTPSTR SE D +KR    
Sbjct: 25  SNSFSMLFSMPNHHKS--FDETDMYPVTSPS-SSVDCTLSLGTPSTRLSE-DDEKRM--- 84

Query: 73  AARNHHRRSAGSYVSNFCWDLLHPK----------HKTSGRGGGGGGASNNNINAAVSNG 132
               H +R +GS +SNFCWD+L  K          HKTS         SNNN+       
Sbjct: 85  ---RHDQRRSGSCMSNFCWDILQTKNNSTPYPPQAHKTSRGSSNSSHNSNNNLA-----N 144

Query: 133 GDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSSVAESNHH 192
            DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA AA+ N++ A     
Sbjct: 145 NDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAASANNASASGAME 204

Query: 193 HHHHHHPMFNGSYTNSNTWVPQQLPATTQKHPCLSAA-------IGNEDVGPENGISFLS 252
            H+ +H         +N+WV       TQK PC S A         + D    N I FLS
Sbjct: 205 QHYGYH--------QNNSWV------QTQKMPCFSPANEFRFIEDNDRDSDTGNNIPFLS 253

Query: 253 WRLNVANTDHRPTLVHDFTR 256
           WRLNV  TD    LVHDFTR
Sbjct: 265 WRLNV--TDRPSQLVHDFTR 253

[Close]
BLAST of Cucsa.106490 vs. TAIR10
Match: AT3G50870.1 (AT3G50870.1 GATA type zinc finger transcription factor family protein)

HSP 1 Score: 194.1 bits (492), Expect = 1.0e-49
Identity = 126/305 (41.31%), Postives = 156/305 (51.15%), Query Frame = 1 

Query: 1   MMHH------YGGGGGGSASSFSVFLSVPNHGAADMYSSSTNYASSSSSPSSVDCTLSLG 60
           M HH      Y      +A S+S+  S+ N G  +      +++SS      VDCTLSLG
Sbjct: 20  MFHHHSQSCCYNNNNNSNAGSYSMVFSMQNGGVFEQNGEDYHHSSSL-----VDCTLSLG 79

Query: 61  TPSTRSSEFDGDKRAAAAAARNHHRRSAGSYVSNFCWDLLHPKHKTS------------- 120
           TPSTR  E D  +R + ++        A S +SNF WDL+H K+  S             
Sbjct: 80  TPSTRLCEEDEKRRRSTSSG-------ASSCISNF-WDLIHTKNNNSKTAPYNNVPSFSA 139

Query: 121 --------GRGGGGGGASNNNINAAVSNGGDPLLARRCANCDTTSTPLWRNGPRGPKSLC 180
                   G GGGGGG            GGD LLARRCANCDTTSTPLWRNGPRGPKSLC
Sbjct: 140 NKPSRGCSGGGGGGGGGG----------GGDSLLARRCANCDTTSTPLWRNGPRGPKSLC 199

Query: 181 NACGIRFKKEERRAAAATVNSSVA-------ESNHHH--HHHHHPMFNGSYTNSNTWVPQ 240
           NACGIRFKKEERR  AAT N+ V        +  HH+  ++++H   N +  N   W   
Sbjct: 200 NACGIRFKKEERRTTAATGNTVVGAAPVQTDQYGHHNSGYNNYHAATNNNNNNGTPWAHH 259

Query: 241 QLPATTQKHPC------------LSAAIGN--EDVGPENGISFLSWRLNVANTDHRPTLV 256
               +TQ+ PC              + + N  E  G   G+ FLSWRLNVA+   R +LV
Sbjct: 260 H---STQRVPCNYPANEIRFMDDYGSGVANNVESDGAHGGVPFLSWRLNVAD---RASLV 295

[Close]
BLAST of Cucsa.106490 vs. TAIR10
Match: AT4G36620.1 (AT4G36620.1 GATA transcription factor 19)

HSP 1 Score: 157.9 bits (398), Expect = 8.2e-39
Identity = 107/242 (44.21%), Postives = 130/242 (53.72%), Query Frame = 1 

Query: 30  MYSSSTNYASSSSSP-SSVDCTLSLGTPSTRSSEFDGDKRAAAAAARNHHRRSAGSYVSN 89
           M+ S  N  S  SSP +SVDCTLSLGTPSTR    D ++R ++     H   + G     
Sbjct: 5   MFFSPENDVSHHSSPYASVDCTLSLGTPSTRLCNEDDERRFSS-----HTSDTIG----- 64

Query: 90  FCWDLLHPKHKTSGRGGGGGGASNNNINAAVSNGGDPLLARRCANCDTTSTPLWRNGPRG 149
             WD L+   K    GGGGGG +              LLARRCANCDTTSTPLWRNGPRG
Sbjct: 65  --WDFLNGSKK----GGGGGGHN--------------LLARRCANCDTTSTPLWRNGPRG 124

Query: 150 PKSLCNACGIRFKKEERRAAAATVNSS--------VAESNHHHHHHHHPMFNGSYTNSNT 209
           PKSLCNACGIRFKKEERRA+ A  ++S        V   +H    +++   N  Y +S+ 
Sbjct: 125 PKSLCNACGIRFKKEERRASTARNSTSGGGSTAAGVPTLDHQASANYYYNNNNQYASSSP 184

Query: 210 W--------VPQQLPATTQKHPCLSAAIGNEDVGPENGISFLSWRLNVANTDHRPTLVHD 255
           W        VP   PA  +        + + DV  +    FLSWRLNVA+   R  LVHD
Sbjct: 185 WHHQHNTQRVPYYSPANNEYSYVDDVRVVDHDVTTD---PFLSWRLNVAD---RTGLVHD 210

[Close]
BLAST of Cucsa.106490 vs. TAIR10
Match: AT2G18380.1 (AT2G18380.1 GATA transcription factor 20)

HSP 1 Score: 131.0 bits (328), Expect = 1.1e-30
Identity = 92/241 (38.17%), Postives = 123/241 (51.04%), Query Frame = 1 

Query: 14  SSFSVFLSVPNHGAADMYSSSTNYASSSSSPSSVDCTLSLGTPSTRSSEFDGDKRAAAAA 73
           S+FS+F S  N    D    + +  ++ SS +SVDCTLSLGTPSTR              
Sbjct: 8   SNFSMFFSSEND---DQNHHNYDPYNNFSSSTSVDCTLSLGTPSTRLD------------ 67

Query: 74  ARNHHRRSAGSYVSNFCWDL-LHPKHKTSGRGGGGGGASNNNINAAVSNGGDPLLARRCA 133
             +HHR S+ +  +N   D  +H          GG   +++     V++     L RRCA
Sbjct: 68  --DHHRFSSANS-NNISGDFYIH----------GGNAKTSSYKKGGVAHS----LPRRCA 127

Query: 134 NCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATV-----NSSVAE--------- 193
           +CDTTSTPLWRNGP+GPKSLCNACGIRFKKEERRA A  +      SS AE         
Sbjct: 128 SCDTTSTPLWRNGPKGPKSLCNACGIRFKKEERRATARNLTISGGGSSAAEVPVENSYNG 187

Query: 194 --SNHHHHHHHHPMFNGSYTNSNTW-VPQQLPATTQKHPCLSAAIGNEDVGPENGISFLS 237
             + + HHHHH+   + S+ + NT  VP   P    ++P +     +         SF+S
Sbjct: 188 GGNYYSHHHHHYASSSPSWAHQNTQRVPYFSPVPEMEYPYVDNVTAS---------SFMS 207

[Close]
BLAST of Cucsa.106490 vs. TAIR10
Match: AT2G45050.1 (AT2G45050.1 GATA transcription factor 2)

HSP 1 Score: 85.5 bits (210), Expect = 5.2e-17
Identity = 46/118 (38.98%), Postives = 56/118 (47.46%), Query Frame = 1 

Query: 96  PKHKTSGRGGGGGGASNNNINAAVSNGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNA 155
           PK + SG GGGGGG   ++ +     GG     RRC +C +  TP WR GP GPK+LCNA
Sbjct: 150 PKKEQSGGGGGGGGRHQSSSSETTEGGG----MRRCTHCASEKTPQWRTGPLGPKTLCNA 209

Query: 156 CGIRFKK----EERRAAAATVNSSVAESNHHH--------------------HHHHHP 190
           CG+RFK      E R A++        SN H                     HHHHHP
Sbjct: 210 CGVRFKSGRLVPEYRPASSPTFVLTQHSNSHRKVMELRRQKEVMRQPQQVQLHHHHHP 263

[Close]
BLAST of Cucsa.106490 vs. TAIR10
Match: AT4G26150.1 (AT4G26150.1 cytokinin-responsive gata factor 1)

HSP 1 Score: 73.9 bits (180), Expect = 1.6e-13
Identity = 36/66 (54.55%), Postives = 49/66 (74.24%), Query Frame = 1 

Query: 111 SNNNINAAVSNG-GDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAA 170
           S+N  N+   NG  +  + R C++C+TT TPLWR+GPRGPKSLCNACGIR +++ RRAA 
Sbjct: 180 SSNLSNSERQNGYNNDCVIRICSDCNTTKTPLWRSGPRGPKSLCNACGIR-QRKARRAAM 239

Query: 171 ATVNSS 176
           AT  ++
Sbjct: 240 ATATAT 244

[Close]
BLAST of Cucsa.106490 vs. NCBI nr
Match: gi|778690730|ref|XP_004146553.2| (PREDICTED: GATA transcription factor 18-like [Cucumis sativus])

HSP 1 Score: 541.6 bits (1394), Expect = 7.5e-151
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 1 

Query: 1   MMHHYGGGGGGSASSFSVFLSVPNHGAADMYSSSTNYASSSSSPSSVDCTLSLGTPSTRS 60
           MMHHYGGGGGGSASSFSVFLSVPNHGAADMYSSSTNYASSSSSPSSVDCTLSLGTPSTRS
Sbjct: 1   MMHHYGGGGGGSASSFSVFLSVPNHGAADMYSSSTNYASSSSSPSSVDCTLSLGTPSTRS 60

Query: 61  SEFDGDKRAAAAAARNHHRRSAGSYVSNFCWDLLHPKHKTSGRGGGGGGASNNNINAAVS 120
           SEFDGDKRAAAAAARNHHRRSAGSYVSNFCWDLLHPKHKTSGRGGGGGGASNNNINAAVS
Sbjct: 61  SEFDGDKRAAAAAARNHHRRSAGSYVSNFCWDLLHPKHKTSGRGGGGGGASNNNINAAVS 120

Query: 121 NGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSSVAESN 180
           NGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSSVAESN
Sbjct: 121 NGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSSVAESN 180

Query: 181 HHHHHHHHPMFNGSYTNSNTWVPQQLPATTQKHPCLSAAIGNEDVGPENGISFLSWRLNV 240
           HHHHHHHHPMFNGSYTNSNTWVPQQLPATTQKHPCLSAAIGNEDVGPENGISFLSWRLNV
Sbjct: 181 HHHHHHHHPMFNGSYTNSNTWVPQQLPATTQKHPCLSAAIGNEDVGPENGISFLSWRLNV 240

Query: 241 ANTDHRPTLVHDFTR 256
           ANTDHRPTLVHDFTR
Sbjct: 241 ANTDHRPTLVHDFTR 255

[Close]
BLAST of Cucsa.106490 vs. NCBI nr
Match: gi|659102361|ref|XP_008452087.1| (PREDICTED: GATA transcription factor 18-like [Cucumis melo])

HSP 1 Score: 469.5 bits (1207), Expect = 3.6e-129
Identity = 235/262 (89.69%), Postives = 238/262 (90.84%), Query Frame = 1 

Query: 1   MMHHYGGGGGGS---ASSFSVFLSVPNHGAADMYSSSTNYASSSSS----PSSVDCTLSL 60
           MMHHYGGGGGG    ASSFS+FLSVPNHGAADMYSSSTNYASSSSS    PSSVDCTLSL
Sbjct: 1   MMHHYGGGGGGGGGGASSFSLFLSVPNHGAADMYSSSTNYASSSSSSSSSPSSVDCTLSL 60

Query: 61  GTPSTRSSEFDGDKRAAAAAARNHHRRSAGSYVSNFCWDLLHPKHKTSGRGGGGGGASNN 120
           GTPSTRSSEFD DKRAAA   RN HRRSAGSYVSNFCWDLLHPKHKTSGRG GG  ASNN
Sbjct: 61  GTPSTRSSEFDSDKRAAA---RNPHRRSAGSYVSNFCWDLLHPKHKTSGRGAGGA-ASNN 120

Query: 121 NINAAVSNGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVN 180
           NI AAVSN GDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVN
Sbjct: 121 NITAAVSNSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVN 180

Query: 181 SSVAESNHHHHHHHHPMFNGSYTNSNTWVPQQLPATTQKHPCLSAAIGNEDVGPENGISF 240
           SS AESN    HHHH MFNGSYTNS+TWVPQQLPATTQKHPCLSAAIGN+DVGPENGISF
Sbjct: 181 SSTAESN----HHHHSMFNGSYTNSSTWVPQQLPATTQKHPCLSAAIGNDDVGPENGISF 240

Query: 241 LSWRLNVANTDHRPTLVHDFTR 256
           LSWRLNVANTDHRPTLVHDFTR
Sbjct: 241 LSWRLNVANTDHRPTLVHDFTR 254

[Close]
BLAST of Cucsa.106490 vs. NCBI nr
Match: gi|147792212|emb|CAN72981.1| (hypothetical protein VITISV_009032 [Vitis vinifera])

HSP 1 Score: 235.3 bits (599), Expect = 1.2e-58
Identity = 140/260 (53.85%), Postives = 160/260 (61.54%), Query Frame = 1 

Query: 13  ASSFSVFLSVPNHGAADMYSSSTNYASSSSSPSSVDCTLSLGTPSTRSSEFDGDKRAAAA 72
           ++SFS+  S+PNH   D    +  Y  +SSS SSVDCTLSLGTPSTR +  D D++    
Sbjct: 99  SNSFSMLFSMPNHKPFD---ETDMYPFTSSSSSSVDCTLSLGTPSTRLT--DNDEK---- 158

Query: 73  AARNHHRRSAGSYVSNFCWDLLHPKHKTSG------RGGGGGGASNNNINAAVSNGGDPL 132
             R HH R AGS VSNFCWD+L  KH  S       RGG  G +SNN+        GDPL
Sbjct: 159 --RMHHDRRAGSCVSNFCWDILQXKHTPSAPTHKPSRGGSSGSSSNNS-------AGDPL 218

Query: 133 LARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAAT----VNSSVAESNHH 192
           LARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA AA       + V E  H 
Sbjct: 219 LARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAAAATTGATAGVMEPQHI 278

Query: 193 HHHHHHPMFNGSYTNSNTWVPQQLPATTQKHPCLSAAIGNE-------DVGPENGISFLS 252
              HH          +N+WV     + TQK PCLS A+GNE       D   + GI FLS
Sbjct: 279 MISHH----------NNSWVHH---SQTQKMPCLSPAMGNEFRFIEDDDRDSDTGIPFLS 324

Query: 253 WRLNVANTDHRPTLVHDFTR 256
           WRLNV +   RP+LVHDFTR
Sbjct: 339 WRLNVTD---RPSLVHDFTR 324

[Close]
BLAST of Cucsa.106490 vs. NCBI nr
Match: gi|731387122|ref|XP_010649139.1| (PREDICTED: GATA transcription factor 18-like [Vitis vinifera])

HSP 1 Score: 235.3 bits (599), Expect = 1.2e-58
Identity = 140/260 (53.85%), Postives = 160/260 (61.54%), Query Frame = 1 

Query: 13  ASSFSVFLSVPNHGAADMYSSSTNYASSSSSPSSVDCTLSLGTPSTRSSEFDGDKRAAAA 72
           ++SFS+  S+PNH   D    +  Y  +SSS SSVDCTLSLGTPSTR +  D D++    
Sbjct: 24  SNSFSMLFSMPNHKPFD---ETDMYPFTSSSSSSVDCTLSLGTPSTRLT--DNDEK---- 83

Query: 73  AARNHHRRSAGSYVSNFCWDLLHPKHKTSG------RGGGGGGASNNNINAAVSNGGDPL 132
             R HH R AGS VSNFCWD+L  KH  S       RGG  G +SNN+        GDPL
Sbjct: 84  --RMHHDRRAGSCVSNFCWDILQSKHTPSAPTHKPSRGGSSGSSSNNS-------AGDPL 143

Query: 133 LARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAAT----VNSSVAESNHH 192
           LARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA AA       + V E  H 
Sbjct: 144 LARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAAAATTGATAGVMEPQHI 203

Query: 193 HHHHHHPMFNGSYTNSNTWVPQQLPATTQKHPCLSAAIGNE-------DVGPENGISFLS 252
              HH          +N+WV     + TQK PCLS A+GNE       D   + GI FLS
Sbjct: 204 MISHH----------NNSWVHH---SQTQKMPCLSPAMGNEFRFIEDDDRDSDTGIPFLS 249

Query: 253 WRLNVANTDHRPTLVHDFTR 256
           WRLNV +   RP+LVHDFTR
Sbjct: 264 WRLNVTD---RPSLVHDFTR 249

[Close]
BLAST of Cucsa.106490 vs. NCBI nr
Match: gi|567866091|ref|XP_006425668.1| (hypothetical protein CICLE_v10026328mg [Citrus clementina])

HSP 1 Score: 225.3 bits (573), Expect = 1.2e-55
Identity = 138/258 (53.49%), Postives = 163/258 (63.18%), Query Frame = 1 

Query: 13  ASSFSVFLSVPNHGAADMYSSSTNYASSSSSPSSVDCTLSLGTPSTRSSEFDGDKRAAAA 72
           ++SFS+  S+PNH +   Y  +  YA  S  PSSVDCTLSLGTPSTR SE D +KR    
Sbjct: 28  SNSFSMLFSMPNHKS---YDETDMYAFMS--PSSVDCTLSLGTPSTRLSE-DDEKRI--- 87

Query: 73  AARNHHRRSAGSYVSNFCWDLLHPK----------HKTSGRGGGGGGASNNNINAAVSNG 132
             R+  RRSA + +++FCWD LH K          HKTS     GG  S+N I++  S+G
Sbjct: 88  --RHDQRRSASNCMTDFCWDFLHTKNSPYNTAQQNHKTSR----GGNNSSNTISS--SSG 147

Query: 133 GDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAATVNSSVAESNHH 192
            DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA AA  NSS   S   
Sbjct: 148 NDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAANANSSNIASAAE 207

Query: 193 HHHHHHPMFNGSYTNSNTWVPQQLPATTQKHPCLSAA-----IGNEDVGPENGISFLSWR 252
             H ++         +N+WV  Q  A +QK PC S A     I + D   + G+ FLSWR
Sbjct: 208 QPHGYY---------NNSWVQVQ-QAQSQKMPCFSPANEFRFIEDSDQTSDTGVPFLSWR 255

Query: 253 LNVANTDHRPTLVHDFTR 256
           LNVA+   RP LVHDFTR
Sbjct: 268 LNVAD---RPGLVHDFTR 255

The following BLAST results are available for this feature:
BLAST of Cucsa.106490 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GAT18_ARATH1.8e-4841.31GATA transcription factor 18 OS=Arabidopsis thaliana GN=GATA18 PE=2 SV=2[more]
GAT19_ARATH1.5e-3744.21GATA transcription factor 19 OS=Arabidopsis thaliana GN=GATA19 PE=2 SV=2[more]
GAT20_ARATH1.9e-2938.17GATA transcription factor 20 OS=Arabidopsis thaliana GN=GATA20 PE=2 SV=2[more]
GATA2_ARATH9.2e-1638.98GATA transcription factor 2 OS=Arabidopsis thaliana GN=GATA2 PE=2 SV=1[more]
GAT22_ARATH2.8e-1254.55Putative GATA transcription factor 22 OS=Arabidopsis thaliana GN=GATA22 PE=3 SV=... [more]
BLAST of Cucsa.106490 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KY15_CUCSA5.2e-151100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G046650 PE=4 SV=1[more]
A5C2I6_VITVI8.0e-5953.85Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009032 PE=4 SV=1[more]
V4RVT5_9ROSI8.3e-5653.49Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026328mg PE=4 SV=1[more]
M5VSX0_PRUPE3.2e-5549.65Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014930mg PE=4 SV=1[more]
B9HF07_POPTR5.6e-5250.00MONOPOLE family protein OS=Populus trichocarpa GN=POPTR_0007s12930g PE=4 SV=2[more]
BLAST of Cucsa.106490 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G50870.11.0e-4941.31 GATA type zinc finger transcription factor family protein[more]
AT4G36620.18.2e-3944.21 GATA transcription factor 19[more]
AT2G18380.11.1e-3038.17 GATA transcription factor 20[more]
AT2G45050.15.2e-1738.98 GATA transcription factor 2[more]
AT4G26150.11.6e-1354.55 cytokinin-responsive gata factor 1[more]
BLAST of Cucsa.106490 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778690730|ref|XP_004146553.2|7.5e-151100.00PREDICTED: GATA transcription factor 18-like [Cucumis sativus][more]
gi|659102361|ref|XP_008452087.1|3.6e-12989.69PREDICTED: GATA transcription factor 18-like [Cucumis melo][more]
gi|147792212|emb|CAN72981.1|1.2e-5853.85hypothetical protein VITISV_009032 [Vitis vinifera][more]
gi|731387122|ref|XP_010649139.1|1.2e-5853.85PREDICTED: GATA transcription factor 18-like [Vitis vinifera][more]
gi|567866091|ref|XP_006425668.1|1.2e-5553.49hypothetical protein CICLE_v10026328mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000679Znf_GATA
IPR013088Znf_NHR/GATA
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0008270zinc ion binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.106490.1Cucsa.106490.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000679Zinc finger, GATA-typePFAMPF00320GATAcoord: 131..165
score: 5.9
IPR000679Zinc finger, GATA-typeSMARTSM00401GATA_3coord: 125..177
score: 4.0
IPR000679Zinc finger, GATA-typePROSITEPS00344GATA_ZN_FINGER_1coord: 131..156
scor
IPR000679Zinc finger, GATA-typePROFILEPS50114GATA_ZN_FINGER_2coord: 125..161
score: 1
IPR013088Zinc finger, NHR/GATA-typeGENE3DG3DSA:3.30.50.10coord: 129..165
score: 3.9
NoneNo IPR availablePANTHERPTHR10071TRANSCRIPTION FACTOR GATA GATA BINDING FACTORcoord: 12..178
score: 4.4
NoneNo IPR availablePANTHERPTHR10071:SF156GATA TRANSCRIPTION FACTOR 18-RELATEDcoord: 12..178
score: 4.4
NoneNo IPR availableunknownSSF57716Glucocorticoid receptor-like (DNA-binding domain)coord: 128..175
score: 8.08