CmaCh04G007570 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G007570
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	GATA transcription factor, putative
Location	Cma_Chr04 : 3856815 .. 3858266 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCCATTTCATTGCCCATTTGCCGGACCAACAAATATGATGCACCACTGCGGCGGTGCCGGCGGAGCTGCCTCGTCATTTTCCGTCTTTTTGTCGGTGCCCAACCACGGTGGCGCCGCCCATGACATGATGGACATCTACTCTAATAATTATGCCTCCTCCTCCTCCTCCTCTTCTTCTTCTCCTTCATCCGTTGATTGTACTCTCTCTCTTGGTACTCCCTCTACGAGATCGTCGGAGTTTGATTCCGACAAACGCGCCGCCCCCCGCCATCACCGCCACTCCGCCGGTTCTTATGTGTCTAACTTCTGTTGGGACTTGTTGCATCCTAAACACAAGAGTGCTGGCCGTTCCACGGCTAGTAATGCCGCAGCTGTCCCTTCCGGTGGCGATCCGCTCCTTGCTCGACGGTGCGCTAACTGCGATACCACTTCTACTCCGCTTTGGAGAAATGGGCCGAGAGGGCCTAAGGTAAATCACGTGATTTCAAATTATGGAAATTATTTTAATTTTCTTTTGTTTTTAAATGCAAATTATTTTTTAAAGTTTAACAATTGTTTATAATACAGATTCTATTCTGATTTTAGTAATTTGTTGGAGTTCTGTTTAAGTTACCGATGCTTATATTATTTAGTATAATTTTATTGGTTAAAACGTTATAATTTTAAATAAAAATTACAATAATTTGAATTAAAGAAGAATTGAGATAGACTAAATTCAATGTAATTACTTTTTTATTTTAGTGTCAAATTTAAAGATTTTATTGTAGCAATAAAATTTGAATTTATTTATTCAATTGAAATGCAGTCCCTATGCAACGCGTGTGGGATTCGGTTCAAGAAGGAAGAGCGGAGGGCGGCGGCGACGGTGAACTGCACGGCTACCGCAATGGCGGCGGAATCTAACAACCACCATCACCCCCACCAACACCACCAGATGTTCAGCGGAAACTACACGAATTCAAGCGCTACGTGGGTTCCACATCACTCGCCGGTGGCAACCCAGAAACTCCCGTGCCTGTCGGCGGCGGCGGCCATTAGCAACGAATCAATGTTTATAGGAAACGACGACGTTCGAAGAACCGAACAAGAAAATGGCATCTCTTATCTCTCTTGGCGCCTCAACGTTACCGATCACCGGCCCAGCCTCGTCCATGACTTCACAAGATGATCCCCCCCAGACCCAGATCAATGGAGAAGCCTTTTTCTTTATTATTTAGCTTTTAAAAAAAAAAATTAAAATTAAAATGCGGCGAAAATGGCTATGGTTAAAAATCCAATTCCTTTTTCTCTACCGATTCAATGGGTAGAAGTGGATTTAAAAGCTCAGATAATTACAAGTTGTTCTTAGTTTTGGTTCTTTTTCCCTCTCACTTTCTGGGTTCCCAAGCAATCAAAAGTTAAGAAGAAACTAAAAGGATATTGTAGGGTGAAGTGATGATGATGATGATGG

mRNA sequence

CTTCCATTTCATTGCCCATTTGCCGGACCAACAAATATGATGCACCACTGCGGCGGTGCCGGCGGAGCTGCCTCGTCATTTTCCGTCTTTTTGTCGGTGCCCAACCACGGTGGCGCCGCCCATGACATGATGGACATCTACTCTAATAATTATGCCTCCTCCTCCTCCTCCTCTTCTTCTTCTCCTTCATCCGTTGATTGTACTCTCTCTCTTGGTACTCCCTCTACGAGATCGTCGGAGTTTGATTCCGACAAACGCGCCGCCCCCCGCCATCACCGCCACTCCGCCGGTTCTTATGTGTCTAACTTCTGTTGGGACTTGTTGCATCCTAAACACAAGAGTGCTGGCCGTTCCACGGCTAGTAATGCCGCAGCTGTCCCTTCCGGTGGCGATCCGCTCCTTGCTCGACGGTGCGCTAACTGCGATACCACTTCTACTCCGCTTTGGAGAAATGGGCCGAGAGGGCCTAAGTCCCTATGCAACGCGTGTGGGATTCGGTTCAAGAAGGAAGAGCGGAGGGCGGCGGCGACGGTGAACTGCACGGCTACCGCAATGGCGGCGGAATCTAACAACCACCATCACCCCCACCAACACCACCAGATGTTCAGCGGAAACTACACGAATTCAAGCGCTACGTGGGTTCCACATCACTCGCCGGTGGCAACCCAGAAACTCCCGTGCCTGTCGGCGGCGGCGGCCATTAGCAACGAATCAATGTTTATAGGAAACGACGACGTTCGAAGAACCGAACAAGAAAATGGCATCTCTTATCTCTCTTGGCGCCTCAACGTTACCGATCACCGGCCCAGCCTCGTCCATGACTTCACAAGATGATCCCCCCCAGACCCAGATCAATGGAGAAGCCTTTTTCTTTATTATTTAGCTTTTAAAAAAAAAAATTAAAATTAAAATGCGGCGAAAATGGCTATGGTTAAAAATCCAATTCCTTTTTCTCTACCGATTCAATGGGTAGAAGTGGATTTAAAAGCTCAGATAATTACAAGTTGTTCTTAGTTTTGGTTCTTTTTCCCTCTCACTTTCTGGGTTCCCAAGCAATCAAAAGTTAAGAAGAAACTAAAAGGATATTGTAGGGTGAAGTGATGATGATGATGATGG

Coding sequence (CDS)

ATGATGCACCACTGCGGCGGTGCCGGCGGAGCTGCCTCGTCATTTTCCGTCTTTTTGTCGGTGCCCAACCACGGTGGCGCCGCCCATGACATGATGGACATCTACTCTAATAATTATGCCTCCTCCTCCTCCTCCTCTTCTTCTTCTCCTTCATCCGTTGATTGTACTCTCTCTCTTGGTACTCCCTCTACGAGATCGTCGGAGTTTGATTCCGACAAACGCGCCGCCCCCCGCCATCACCGCCACTCCGCCGGTTCTTATGTGTCTAACTTCTGTTGGGACTTGTTGCATCCTAAACACAAGAGTGCTGGCCGTTCCACGGCTAGTAATGCCGCAGCTGTCCCTTCCGGTGGCGATCCGCTCCTTGCTCGACGGTGCGCTAACTGCGATACCACTTCTACTCCGCTTTGGAGAAATGGGCCGAGAGGGCCTAAGTCCCTATGCAACGCGTGTGGGATTCGGTTCAAGAAGGAAGAGCGGAGGGCGGCGGCGACGGTGAACTGCACGGCTACCGCAATGGCGGCGGAATCTAACAACCACCATCACCCCCACCAACACCACCAGATGTTCAGCGGAAACTACACGAATTCAAGCGCTACGTGGGTTCCACATCACTCGCCGGTGGCAACCCAGAAACTCCCGTGCCTGTCGGCGGCGGCGGCCATTAGCAACGAATCAATGTTTATAGGAAACGACGACGTTCGAAGAACCGAACAAGAAAATGGCATCTCTTATCTCTCTTGGCGCCTCAACGTTACCGATCACCGGCCCAGCCTCGTCCATGACTTCACAAGATGA

Protein sequence

MMHHCGGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAPRHHRHSAGSYVSNFCWDLLHPKHKSAGRSTASNAAAVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATAMAAESNNHHHPHQHHQMFSGNYTNSSATWVPHHSPVATQKLPCLSAAAAISNESMFIGNDDVRRTEQENGISYLSWRLNVTDHRPSLVHDFTR

Homology

[Close]

BLAST of CmaCh04G007570 vs. Swiss-Prot
Match: GAT18_ARATH (GATA transcription factor 18 OS=Arabidopsis thaliana GN=GATA18 PE=2 SV=2)

HSP 1 Score: 171.8 bits (434), Expect = 1.0e-41
Identity = 123/282 (43.62%), Postives = 153/282 (54.26%), Query Frame = 1


Query: 12  ASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSLGTPSTRSSEFDS 71
           A S+S+  S+ N G        ++  N      SSS     VDCTLSLGTPSTR  E D 
Sbjct: 38  AGSYSMVFSMQNGG--------VFEQNGEDYHHSSSL----VDCTLSLGTPSTRLCEEDE 97

Query: 72  DKRAAPRHHRHSAGSYVSNFCWDLLHPKHKSAGRSTASN----AAAVPS----------- 131
            +R   R     A S +SNF WDL+H K+ ++  +  +N    +A  PS           
Sbjct: 98  KRR---RSTSSGASSCISNF-WDLIHTKNNNSKTAPYNNVPSFSANKPSRGCSGGGGGGG 157

Query: 132 ---GGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAA----TVNCT 191
              GGD LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERR  A    TV   
Sbjct: 158 GGGGGDSLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRTTAATGNTVVGA 217

Query: 192 ATAMAAESNNHHHPHQHHQMFSGNYTNSSATWVPHHSPVATQKLPCLSAAAAISNESMFI 251
           A     +  +H+  + ++   + N  N+   W  HHS   TQ++PC   A    NE  F+
Sbjct: 218 APVQTDQYGHHNSGYNNYHAATNNNNNNGTPWAHHHS---TQRVPCNYPA----NEIRFM 277

Query: 252 GN------DDVRRTEQENGISYLSWRLNVTDHRPSLVHDFTR 266
            +      ++V       G+ +LSWRLNV D R SLVHDFTR
Sbjct: 278 DDYGSGVANNVESDGAHGGVPFLSWRLNVAD-RASLVHDFTR 295

[Close]

BLAST of CmaCh04G007570 vs. Swiss-Prot
Match: GAT19_ARATH (GATA transcription factor 19 OS=Arabidopsis thaliana GN=GATA19 PE=2 SV=2)

HSP 1 Score: 152.1 bits (383), Expect = 8.3e-36
Identity = 105/222 (47.30%), Postives = 125/222 (56.31%), Query Frame = 1


Query: 44  SSSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAPRHHRHSAGSYVSNFCWDLLHPKHKSA 103
           S  SS  +SVDCTLSLGTPSTR    D ++R +  H   + G       WD L+   K  
Sbjct: 14  SHHSSPYASVDCTLSLGTPSTRLCNEDDERRFSS-HTSDTIG-------WDFLNGSKKGG 73

Query: 104 GRSTASNAAAVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAA 163
           G            GG  LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA+
Sbjct: 74  G-----------GGGHNLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAS 133

Query: 164 ATVNCTATAMAAESNNHHHPHQHHQMFSGNYTNSSATWVPHHSPVATQKLPCLSAAAAIS 223
              N T+   +  +      HQ    +  N  N  A+  P H    TQ++P  S A   +
Sbjct: 134 TARNSTSGGGSTAAGVPTLDHQASANYYYNNNNQYASSSPWHHQHNTQRVPYYSPA---N 193

Query: 224 NESMFIGNDDVRRTEQE-NGISYLSWRLNVTDHRPSLVHDFT 265
           NE  ++  DDVR  + +     +LSWRLNV D R  LVHDFT
Sbjct: 194 NEYSYV--DDVRVVDHDVTTDPFLSWRLNVAD-RTGLVHDFT 210

[Close]

BLAST of CmaCh04G007570 vs. Swiss-Prot
Match: GAT20_ARATH (GATA transcription factor 20 OS=Arabidopsis thaliana GN=GATA20 PE=2 SV=2)

HSP 1 Score: 117.1 bits (292), Expect = 3.0e-25
Identity = 93/225 (41.33%), Postives = 119/225 (52.89%), Query Frame = 1


Query: 13  SSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSLGTPSTRSSEFDSD 72
           S+FS+F S  N     H+  D Y NN++SS+S        VDCTLSLGTPSTR  +    
Sbjct: 8   SNFSMFFSSENDDQNHHNY-DPY-NNFSSSTS--------VDCTLSLGTPSTRLDD---- 67

Query: 73  KRAAPRHHRHSAGSYVSNFCWDL-LHPKHKSAGRSTASNAAAVPSGGDPLLARRCANCDT 132
                 HHR S+ +  +N   D  +H          A  ++    G    L RRCA+CDT
Sbjct: 68  ------HHRFSSAN-SNNISGDFYIH-------GGNAKTSSYKKGGVAHSLPRRCASCDT 127

Query: 133 TSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTAT---AMAAE----------SN 192
           TSTPLWRNGP+GPKSLCNACGIRFKKEERRA A  N T +   + AAE           N
Sbjct: 128 TSTPLWRNGPKGPKSLCNACGIRFKKEERRATAR-NLTISGGGSSAAEVPVENSYNGGGN 187

Query: 193 NHHHPHQHHQMFSGNYTNSSATWVPHHSPVATQKLPCLSAAAAIS 224
            + H H H+   S ++ + +   VP+ SPV   + P +    A S
Sbjct: 188 YYSHHHHHYASSSPSWAHQNTQRVPYFSPVPEMEYPYVDNVTASS 203

[Close]

BLAST of CmaCh04G007570 vs. Swiss-Prot
Match: GAT22_ARATH (Putative GATA transcription factor 22 OS=Arabidopsis thaliana GN=GATA22 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.9e-12
Identity = 35/67 (52.24%), Postives = 44/67 (65.67%), Query Frame = 1


Query: 106 STASNAAAVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAT 165
           S  SN+       +  + R C++C+TT TPLWR+GPRGPKSLCNACGIR +K  R A AT
Sbjct: 181 SNLSNSERQNGYNNDCVIRICSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMAT 240

Query: 166 VNCTATA 173
              TA +
Sbjct: 241 ATATAVS 247

[Close]

BLAST of CmaCh04G007570 vs. Swiss-Prot
Match: GAT21_ARATH (GATA transcription factor 21 OS=Arabidopsis thaliana GN=GATA21 PE=1 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 2.1e-10
Identity = 29/41 (70.73%), Postives = 34/41 (82.93%), Query Frame = 1


Query: 124 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAA 165
           R C++C+TT TPLWR+GPRGPKSLCNACGIR +K  R A A
Sbjct: 230 RVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMA 270

[Close]

BLAST of CmaCh04G007570 vs. TrEMBL
Match: A0A0A0KY15_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G046650 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 5.9e-89
Identity = 196/279 (70.25%), Postives = 214/279 (76.70%), Query Frame = 1


Query: 1   MMHHCGGAGG-AASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSL 60
           MMHH GG GG +ASSFSVFLSVPNHG A     D+YS++  ++ +SSSSSPSSVDCTLSL
Sbjct: 1   MMHHYGGGGGGSASSFSVFLSVPNHGAA-----DMYSSS--TNYASSSSSPSSVDCTLSL 60

Query: 61  GTPSTRSSEFDSDKRAAP----RHHRHSAGSYVSNFCWDLLHPKHKSAGRST----ASNA 120
           GTPSTRSSEFD DKRAA      HHR SAGSYVSNFCWDLLHPKHK++GR      ASN 
Sbjct: 61  GTPSTRSSEFDGDKRAAAAAARNHHRRSAGSYVSNFCWDLLHPKHKTSGRGGGGGGASNN 120

Query: 121 ---AAVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNC 180
              AAV +GGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAA    
Sbjct: 121 NINAAVSNGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAA---A 180

Query: 181 TATAMAAESNNHHHPHQHHQMFSGNYTNSSATWVPHHSPVATQKLPCLSAAAAISNESMF 240
           T  +  AESN+HHH H HH MF+G+YTNS+ TWVP   P  TQK PCLSAA         
Sbjct: 181 TVNSSVAESNHHHH-HHHHPMFNGSYTNSN-TWVPQQLPATTQKHPCLSAA--------- 240

Query: 241 IGNDDVRRTEQENGISYLSWRLNV--TDHRPSLVHDFTR 266
           IGN+DV     ENGIS+LSWRLNV  TDHRP+LVHDFTR
Sbjct: 241 IGNEDV---GPENGISFLSWRLNVANTDHRPTLVHDFTR 255

[Close]

BLAST of CmaCh04G007570 vs. TrEMBL
Match: A5C2I6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009032 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 3.1e-53
Identity = 141/267 (52.81%), Postives = 164/267 (61.42%), Query Frame = 1


Query: 5   CGGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSLGTPST 64
           CG     ++SFS+  S+PNH     D  D+Y          +SSS SSVDCTLSLGTPST
Sbjct: 92  CGLFHNQSNSFSMLFSMPNH--KPFDETDMYP--------FTSSSSSSVDCTLSLGTPST 151

Query: 65  RSSEFDSDKRAAPRHHRHSAGSYVSNFCWDLLHPKHKSAG------RSTASNAAAVPSGG 124
           R ++ D  +     HH   AGS VSNFCWD+L  KH  +       R  +S +++  S G
Sbjct: 152 RLTDNDEKRM----HHDRRAGSCVSNFCWDILQXKHTPSAPTHKPSRGGSSGSSSNNSAG 211

Query: 125 DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATAMAAESN 184
           DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA A    T  A A    
Sbjct: 212 DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAAA-ATTGATAGVME 271

Query: 185 NHHHPHQHHQMFSGNYTNSSATWVPHHSPVATQKLPCLSAAAAISNESMFIGNDDVRRTE 244
             H    HH          + +WV HHS   TQK+PCLS   A+ NE  FI +DD    +
Sbjct: 272 PQHIMISHH----------NNSWV-HHS--QTQKMPCLS--PAMGNEFRFIEDDD---RD 324

Query: 245 QENGISYLSWRLNVTDHRPSLVHDFTR 266
            + GI +LSWRLNVTD RPSLVHDFTR
Sbjct: 332 SDTGIPFLSWRLNVTD-RPSLVHDFTR 324

[Close]

BLAST of CmaCh04G007570 vs. TrEMBL
Match: M5VSX0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014930mg PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.2e-51
Identity = 139/279 (49.82%), Postives = 167/279 (59.86%), Query Frame = 1


Query: 13  SSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSS-------SSSPSSVDCTLSLGTPSTR 72
           SSFS+  S+PNH    H   D + +++  +           +SS SSVDCTLSLGTPSTR
Sbjct: 28  SSFSMLFSMPNH----HKPYDHHHHHHHETQHDHHNHMYPFASSSSSVDCTLSLGTPSTR 87

Query: 73  SSEFD---SDKRAAPRHHRHSAGSYVSNFCWDLLHPKHKSAGRSTASN------------ 132
            +E D    DKR   R+ R S    VSNFCWDLL PKH +   +++ +            
Sbjct: 88  LTENDVVLDDKRT--RNERRS----VSNFCWDLLQPKHHATSATSSHHHKNGSHRSGGNG 147

Query: 133 ---AAAVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA-AATV 192
              + AV S  DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA AA  
Sbjct: 148 NGVSNAVHSNNDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAAAA 207

Query: 193 NCTATAMAAESNNHHHPHQHHQMFSGNYTNSSATWVPHHSPVATQKLPCLSAAAAISNES 252
           N  ++++    +N H   QHH      + NS   W+PH     TQK+PC S   A+ NE 
Sbjct: 208 NGGSSSVVGMDHNSHMLSQHH------HNNS---WMPHSQ---TQKMPCFS--PAMGNEF 267

Query: 253 MFIGNDDVRRTEQENGISYLSWRLNVTDHRPSLVHDFTR 266
            F+ +D         GI +LSWRLNVTD RPSLVHDFTR
Sbjct: 268 RFMEDDTAHHENDATGIPFLSWRLNVTD-RPSLVHDFTR 281

[Close]

BLAST of CmaCh04G007570 vs. TrEMBL
Match: A0A061DFR9_THECC (GATA type zinc finger transcription factor family protein OS=Theobroma cacao GN=TCM_000376 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.4e-50
Identity = 143/285 (50.18%), Postives = 167/285 (58.60%), Query Frame = 1


Query: 1   MMHHCGGAGG-------------AASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSS 60
           MMH C  + G              ++SFS+  S+PN    + D  D+Y+  Y SSSSSSS
Sbjct: 1   MMHRCSSSQGNMVGPCSCGLFHNQSNSFSMLFSMPNPH-KSFDETDMYA--YTSSSSSSS 60

Query: 61  SSPSSVDCTLSLGTPSTRSSEFDSDKRAAPRHHRHSAGSYVSNFCWDLLHPKHK------ 120
                VDCTLSLGTPSTR  E D DKR   RH R S GS +SNFCWDLL  K+       
Sbjct: 61  -----VDCTLSLGTPSTRLCE-DDDKRI--RHDRRS-GSCMSNFCWDLLQNKNAPYSQQT 120

Query: 121 -SAGRSTASNAAAVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 180
             A R ++ N+++  SG DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER
Sbjct: 121 PKASRGSSGNSSS-SSGNDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 180

Query: 181 RAAATVNCTATAMAAESNNHHHPHQHHQMFSGNYTNSSATWVPHHSPVATQKLPCLSAAA 240
           RA A  N +    +     HH  H +             +WV HHS    QK+PC S   
Sbjct: 181 RATANANNSGATASMLEQQHHGYHNN-------------SWV-HHS--QNQKMPCFSPV- 240

Query: 241 AISNESMFIGNDDVRRTEQENGISYLSWRLNVTDHRPSLVHDFTR 266
              NE  FI + D    + + GI +LSWRLNVTD   SLVHDFTR
Sbjct: 241 ---NEFRFIEDTD---RDSDTGIPFLSWRLNVTDRPTSLVHDFTR 249

[Close]

BLAST of CmaCh04G007570 vs. TrEMBL
Match: V4RVT5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026328mg PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 7.0e-50
Identity = 145/294 (49.32%), Postives = 169/294 (57.48%), Query Frame = 1


Query: 1   MMHHCGGAGG----------------AASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSS 60
           MMH C  + G                 ++SFS+  S+PNH   ++D  D+Y+        
Sbjct: 1   MMHRCSSSHGNMVGSSCSCSSGLYPSQSNSFSMLFSMPNH--KSYDETDMYA-------- 60

Query: 61  SSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAPRH-HRHSAGSYVSNFCWDLLHPK---- 120
               SPSSVDCTLSLGTPSTR SE D +KR   RH  R SA + +++FCWD LH K    
Sbjct: 61  --FMSPSSVDCTLSLGTPSTRLSE-DDEKRI--RHDQRRSASNCMTDFCWDFLHTKNSPY 120

Query: 121 ------HK-SAGRSTASNAAAVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACG 180
                 HK S G + +SN  +  SG DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACG
Sbjct: 121 NTAQQNHKTSRGGNNSSNTISSSSGNDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACG 180

Query: 181 IRFKKEERRA-AATVNCTATAMAAESNNHHHPHQHHQMFSGNYTNSSATWVPHHSPVATQ 240
           IRFKKEERRA AA  N +  A AAE      PH       G Y NS   WV       +Q
Sbjct: 181 IRFKKEERRATAANANSSNIASAAE-----QPH-------GYYNNS---WV-QVQQAQSQ 240

Query: 241 KLPCLSAAAAISNESMFIGNDDVRRTEQENGISYLSWRLNVTDHRPSLVHDFTR 266
           K+PC S A    NE  FI + D      + G+ +LSWRLNV D RP LVHDFTR
Sbjct: 241 KMPCFSPA----NEFRFIEDSD---QTSDTGVPFLSWRLNVAD-RPGLVHDFTR 255

[Close]

BLAST of CmaCh04G007570 vs. TAIR10
Match: AT3G50870.1 (AT3G50870.1 GATA type zinc finger transcription factor family protein)

HSP 1 Score: 171.8 bits (434), Expect = 5.7e-43
Identity = 123/282 (43.62%), Postives = 153/282 (54.26%), Query Frame = 1


Query: 12  ASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSLGTPSTRSSEFDS 71
           A S+S+  S+ N G        ++  N      SSS     VDCTLSLGTPSTR  E D 
Sbjct: 38  AGSYSMVFSMQNGG--------VFEQNGEDYHHSSSL----VDCTLSLGTPSTRLCEEDE 97

Query: 72  DKRAAPRHHRHSAGSYVSNFCWDLLHPKHKSAGRSTASN----AAAVPS----------- 131
            +R   R     A S +SNF WDL+H K+ ++  +  +N    +A  PS           
Sbjct: 98  KRR---RSTSSGASSCISNF-WDLIHTKNNNSKTAPYNNVPSFSANKPSRGCSGGGGGGG 157

Query: 132 ---GGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAA----TVNCT 191
              GGD LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERR  A    TV   
Sbjct: 158 GGGGGDSLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRTTAATGNTVVGA 217

Query: 192 ATAMAAESNNHHHPHQHHQMFSGNYTNSSATWVPHHSPVATQKLPCLSAAAAISNESMFI 251
           A     +  +H+  + ++   + N  N+   W  HHS   TQ++PC   A    NE  F+
Sbjct: 218 APVQTDQYGHHNSGYNNYHAATNNNNNNGTPWAHHHS---TQRVPCNYPA----NEIRFM 277

Query: 252 GN------DDVRRTEQENGISYLSWRLNVTDHRPSLVHDFTR 266
            +      ++V       G+ +LSWRLNV D R SLVHDFTR
Sbjct: 278 DDYGSGVANNVESDGAHGGVPFLSWRLNVAD-RASLVHDFTR 295

[Close]

BLAST of CmaCh04G007570 vs. TAIR10
Match: AT4G36620.1 (AT4G36620.1 GATA transcription factor 19)

HSP 1 Score: 152.1 bits (383), Expect = 4.7e-37
Identity = 105/222 (47.30%), Postives = 125/222 (56.31%), Query Frame = 1


Query: 44  SSSSSSPSSVDCTLSLGTPSTRSSEFDSDKRAAPRHHRHSAGSYVSNFCWDLLHPKHKSA 103
           S  SS  +SVDCTLSLGTPSTR    D ++R +  H   + G       WD L+   K  
Sbjct: 14  SHHSSPYASVDCTLSLGTPSTRLCNEDDERRFSS-HTSDTIG-------WDFLNGSKKGG 73

Query: 104 GRSTASNAAAVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAA 163
           G            GG  LLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA+
Sbjct: 74  G-----------GGGHNLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAS 133

Query: 164 ATVNCTATAMAAESNNHHHPHQHHQMFSGNYTNSSATWVPHHSPVATQKLPCLSAAAAIS 223
              N T+   +  +      HQ    +  N  N  A+  P H    TQ++P  S A   +
Sbjct: 134 TARNSTSGGGSTAAGVPTLDHQASANYYYNNNNQYASSSPWHHQHNTQRVPYYSPA---N 193

Query: 224 NESMFIGNDDVRRTEQE-NGISYLSWRLNVTDHRPSLVHDFT 265
           NE  ++  DDVR  + +     +LSWRLNV D R  LVHDFT
Sbjct: 194 NEYSYV--DDVRVVDHDVTTDPFLSWRLNVAD-RTGLVHDFT 210

[Close]

BLAST of CmaCh04G007570 vs. TAIR10
Match: AT2G18380.1 (AT2G18380.1 GATA transcription factor 20)

HSP 1 Score: 117.1 bits (292), Expect = 1.7e-26
Identity = 93/225 (41.33%), Postives = 119/225 (52.89%), Query Frame = 1


Query: 13  SSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSLGTPSTRSSEFDSD 72
           S+FS+F S  N     H+  D Y NN++SS+S        VDCTLSLGTPSTR  +    
Sbjct: 8   SNFSMFFSSENDDQNHHNY-DPY-NNFSSSTS--------VDCTLSLGTPSTRLDD---- 67

Query: 73  KRAAPRHHRHSAGSYVSNFCWDL-LHPKHKSAGRSTASNAAAVPSGGDPLLARRCANCDT 132
                 HHR S+ +  +N   D  +H          A  ++    G    L RRCA+CDT
Sbjct: 68  ------HHRFSSAN-SNNISGDFYIH-------GGNAKTSSYKKGGVAHSLPRRCASCDT 127

Query: 133 TSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTAT---AMAAE----------SN 192
           TSTPLWRNGP+GPKSLCNACGIRFKKEERRA A  N T +   + AAE           N
Sbjct: 128 TSTPLWRNGPKGPKSLCNACGIRFKKEERRATAR-NLTISGGGSSAAEVPVENSYNGGGN 187

Query: 193 NHHHPHQHHQMFSGNYTNSSATWVPHHSPVATQKLPCLSAAAAIS 224
            + H H H+   S ++ + +   VP+ SPV   + P +    A S
Sbjct: 188 YYSHHHHHYASSSPSWAHQNTQRVPYFSPVPEMEYPYVDNVTASS 203

[Close]

BLAST of CmaCh04G007570 vs. TAIR10
Match: AT4G26150.1 (AT4G26150.1 cytokinin-responsive gata factor 1)

HSP 1 Score: 73.9 bits (180), Expect = 1.6e-13
Identity = 35/67 (52.24%), Postives = 44/67 (65.67%), Query Frame = 1


Query: 106 STASNAAAVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAT 165
           S  SN+       +  + R C++C+TT TPLWR+GPRGPKSLCNACGIR +K  R A AT
Sbjct: 181 SNLSNSERQNGYNNDCVIRICSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMAT 240

Query: 166 VNCTATA 173
              TA +
Sbjct: 241 ATATAVS 247

[Close]

BLAST of CmaCh04G007570 vs. TAIR10
Match: AT5G56860.1 (AT5G56860.1 GATA type zinc finger transcription factor family protein)

HSP 1 Score: 67.8 bits (164), Expect = 1.2e-11
Identity = 29/41 (70.73%), Postives = 34/41 (82.93%), Query Frame = 1


Query: 124 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAA 165
           R C++C+TT TPLWR+GPRGPKSLCNACGIR +K  R A A
Sbjct: 230 RVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMA 270

[Close]

BLAST of CmaCh04G007570 vs. NCBI nr
Match: gi|659102361|ref|XP_008452087.1| (PREDICTED: GATA transcription factor 18-like [Cucumis melo])

HSP 1 Score: 340.5 bits (872), Expect = 2.6e-90
Identity = 201/280 (71.79%), Postives = 214/280 (76.43%), Query Frame = 1


Query: 1   MMHHCGGAGGA----ASSFSVFLSVPNHGGAAHDMMDIYSN--NYASSSSSSSSSPSSVD 60
           MMHH GG GG     ASSFS+FLSVPNHG A     D+YS+  NYASSSSSSSSSPSSVD
Sbjct: 1   MMHHYGGGGGGGGGGASSFSLFLSVPNHGAA-----DMYSSSTNYASSSSSSSSSPSSVD 60

Query: 61  CTLSLGTPSTRSSEFDSDKRAAPRH-HRHSAGSYVSNFCWDLLHPKHKSAGRST---ASN 120
           CTLSLGTPSTRSSEFDSDKRAA R+ HR SAGSYVSNFCWDLLHPKHK++GR     ASN
Sbjct: 61  CTLSLGTPSTRSSEFDSDKRAAARNPHRRSAGSYVSNFCWDLLHPKHKTSGRGAGGAASN 120

Query: 121 ---AAAVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVN 180
               AAV + GDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAA   
Sbjct: 121 NNITAAVSNSGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAAA-- 180

Query: 181 CTATAMAAESNNHHHPHQHHQMFSGNYTNSSATWVPHHSPVATQKLPCLSAAAAISNESM 240
            T  +  AESN+HHH      MF+G+YTNSS TWVP   P  TQK PCLSAA        
Sbjct: 181 -TVNSSTAESNHHHH-----SMFNGSYTNSS-TWVPQQLPATTQKHPCLSAA-------- 240

Query: 241 FIGNDDVRRTEQENGISYLSWRLNV--TDHRPSLVHDFTR 266
            IGNDDV     ENGIS+LSWRLNV  TDHRP+LVHDFTR
Sbjct: 241 -IGNDDV---GPENGISFLSWRLNVANTDHRPTLVHDFTR 254

[Close]

BLAST of CmaCh04G007570 vs. NCBI nr
Match: gi|778690730|ref|XP_004146553.2| (PREDICTED: GATA transcription factor 18-like [Cucumis sativus])

HSP 1 Score: 335.5 bits (859), Expect = 8.5e-89
Identity = 196/279 (70.25%), Postives = 214/279 (76.70%), Query Frame = 1


Query: 1   MMHHCGGAGG-AASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSL 60
           MMHH GG GG +ASSFSVFLSVPNHG A     D+YS++  ++ +SSSSSPSSVDCTLSL
Sbjct: 1   MMHHYGGGGGGSASSFSVFLSVPNHGAA-----DMYSSS--TNYASSSSSPSSVDCTLSL 60

Query: 61  GTPSTRSSEFDSDKRAAP----RHHRHSAGSYVSNFCWDLLHPKHKSAGRST----ASNA 120
           GTPSTRSSEFD DKRAA      HHR SAGSYVSNFCWDLLHPKHK++GR      ASN 
Sbjct: 61  GTPSTRSSEFDGDKRAAAAAARNHHRRSAGSYVSNFCWDLLHPKHKTSGRGGGGGGASNN 120

Query: 121 ---AAVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNC 180
              AAV +GGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAA    
Sbjct: 121 NINAAVSNGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAA---A 180

Query: 181 TATAMAAESNNHHHPHQHHQMFSGNYTNSSATWVPHHSPVATQKLPCLSAAAAISNESMF 240
           T  +  AESN+HHH H HH MF+G+YTNS+ TWVP   P  TQK PCLSAA         
Sbjct: 181 TVNSSVAESNHHHH-HHHHPMFNGSYTNSN-TWVPQQLPATTQKHPCLSAA--------- 240

Query: 241 IGNDDVRRTEQENGISYLSWRLNV--TDHRPSLVHDFTR 266
           IGN+DV     ENGIS+LSWRLNV  TDHRP+LVHDFTR
Sbjct: 241 IGNEDV---GPENGISFLSWRLNVANTDHRPTLVHDFTR 255

[Close]

BLAST of CmaCh04G007570 vs. NCBI nr
Match: gi|147792212|emb|CAN72981.1| (hypothetical protein VITISV_009032 [Vitis vinifera])

HSP 1 Score: 216.9 bits (551), Expect = 4.4e-53
Identity = 141/267 (52.81%), Postives = 164/267 (61.42%), Query Frame = 1


Query: 5   CGGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSLGTPST 64
           CG     ++SFS+  S+PNH     D  D+Y          +SSS SSVDCTLSLGTPST
Sbjct: 92  CGLFHNQSNSFSMLFSMPNH--KPFDETDMYP--------FTSSSSSSVDCTLSLGTPST 151

Query: 65  RSSEFDSDKRAAPRHHRHSAGSYVSNFCWDLLHPKHKSAG------RSTASNAAAVPSGG 124
           R ++ D  +     HH   AGS VSNFCWD+L  KH  +       R  +S +++  S G
Sbjct: 152 RLTDNDEKRM----HHDRRAGSCVSNFCWDILQXKHTPSAPTHKPSRGGSSGSSSNNSAG 211

Query: 125 DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATAMAAESN 184
           DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA A    T  A A    
Sbjct: 212 DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAAA-ATTGATAGVME 271

Query: 185 NHHHPHQHHQMFSGNYTNSSATWVPHHSPVATQKLPCLSAAAAISNESMFIGNDDVRRTE 244
             H    HH          + +WV HHS   TQK+PCLS   A+ NE  FI +DD    +
Sbjct: 272 PQHIMISHH----------NNSWV-HHS--QTQKMPCLS--PAMGNEFRFIEDDD---RD 324

Query: 245 QENGISYLSWRLNVTDHRPSLVHDFTR 266
            + GI +LSWRLNVTD RPSLVHDFTR
Sbjct: 332 SDTGIPFLSWRLNVTD-RPSLVHDFTR 324

[Close]

BLAST of CmaCh04G007570 vs. NCBI nr
Match: gi|731387122|ref|XP_010649139.1| (PREDICTED: GATA transcription factor 18-like [Vitis vinifera])

HSP 1 Score: 216.9 bits (551), Expect = 4.4e-53
Identity = 141/267 (52.81%), Postives = 164/267 (61.42%), Query Frame = 1


Query: 5   CGGAGGAASSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSSSSSPSSVDCTLSLGTPST 64
           CG     ++SFS+  S+PNH     D  D+Y          +SSS SSVDCTLSLGTPST
Sbjct: 17  CGLFHNQSNSFSMLFSMPNH--KPFDETDMYP--------FTSSSSSSVDCTLSLGTPST 76

Query: 65  RSSEFDSDKRAAPRHHRHSAGSYVSNFCWDLLHPKHKSAG------RSTASNAAAVPSGG 124
           R ++ D  +     HH   AGS VSNFCWD+L  KH  +       R  +S +++  S G
Sbjct: 77  RLTDNDEKRM----HHDRRAGSCVSNFCWDILQSKHTPSAPTHKPSRGGSSGSSSNNSAG 136

Query: 125 DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAAATVNCTATAMAAESN 184
           DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA A    T  A A    
Sbjct: 137 DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAAA-ATTGATAGVME 196

Query: 185 NHHHPHQHHQMFSGNYTNSSATWVPHHSPVATQKLPCLSAAAAISNESMFIGNDDVRRTE 244
             H    HH          + +WV HHS   TQK+PCLS   A+ NE  FI +DD    +
Sbjct: 197 PQHIMISHH----------NNSWV-HHS--QTQKMPCLS--PAMGNEFRFIEDDD---RD 249

Query: 245 QENGISYLSWRLNVTDHRPSLVHDFTR 266
            + GI +LSWRLNVTD RPSLVHDFTR
Sbjct: 257 SDTGIPFLSWRLNVTD-RPSLVHDFTR 249

[Close]

BLAST of CmaCh04G007570 vs. NCBI nr
Match: gi|645273031|ref|XP_008241682.1| (PREDICTED: GATA transcription factor 19-like [Prunus mume])

HSP 1 Score: 211.1 bits (536), Expect = 2.4e-51
Identity = 139/279 (49.82%), Postives = 167/279 (59.86%), Query Frame = 1


Query: 13  SSFSVFLSVPNHGGAAHDMMDIYSNNYASSSSSS-------SSSPSSVDCTLSLGTPSTR 72
           SSFS+  S+PNH    H   D + +++  +           +SS SSVDCTLSLGTPSTR
Sbjct: 28  SSFSMLFSMPNH----HRPYDHHHHHHHETQHDHHNHMYPFASSSSSVDCTLSLGTPSTR 87

Query: 73  SSEFD---SDKRAAPRHHRHSAGSYVSNFCWDLLHPKHKSAGRSTASN------------ 132
            +E D    DKR   R+ R S    VSNFCWDLL PKH +   +++ +            
Sbjct: 88  LTENDVVLDDKRT--RNERRS----VSNFCWDLLQPKHHATSATSSHHHKNGSHRSGGNG 147

Query: 133 ---AAAVPSGGDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA-AATV 192
              + AV S  DPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRA AA  
Sbjct: 148 NGVSNAVHSNNDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRATAAAA 207

Query: 193 NCTATAMAAESNNHHHPHQHHQMFSGNYTNSSATWVPHHSPVATQKLPCLSAAAAISNES 252
           N  ++++    +N H   QHH      + NS   W+PH     TQK+PC S   A+ NE 
Sbjct: 208 NGASSSVVGMEHNSHMLSQHH------HNNS---WMPHSQ---TQKMPCFS--PAMGNEF 267

Query: 253 MFIGNDDVRRTEQENGISYLSWRLNVTDHRPSLVHDFTR 266
            F+ +D         GI +LSWRLNVTD RPSLVHDFTR
Sbjct: 268 RFMEDDTAHHENDATGIPFLSWRLNVTD-RPSLVHDFTR 281

The following BLAST results are available for this feature:

BLAST of CmaCh04G007570 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GAT18_ARATH	1.0e-41	43.62	GATA transcription factor 18 OS=Arabidopsis thaliana GN=GATA18 PE=2 SV=2	[more]
GAT19_ARATH	8.3e-36	47.30	GATA transcription factor 19 OS=Arabidopsis thaliana GN=GATA19 PE=2 SV=2	[more]
GAT20_ARATH	3.0e-25	41.33	GATA transcription factor 20 OS=Arabidopsis thaliana GN=GATA20 PE=2 SV=2	[more]
GAT22_ARATH	2.9e-12	52.24	Putative GATA transcription factor 22 OS=Arabidopsis thaliana GN=GATA22 PE=3 SV=...	[more]
GAT21_ARATH	2.1e-10	70.73	GATA transcription factor 21 OS=Arabidopsis thaliana GN=GATA21 PE=1 SV=2	[more]

BLAST of CmaCh04G007570 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KY15_CUCSA	5.9e-89	70.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G046650 PE=4 SV=1	[more]
A5C2I6_VITVI	3.1e-53	52.81	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009032 PE=4 SV=1	[more]
M5VSX0_PRUPE	2.2e-51	49.82	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014930mg PE=4 SV=1	[more]
A0A061DFR9_THECC	2.4e-50	50.18	GATA type zinc finger transcription factor family protein OS=Theobroma cacao GN=...	[more]
V4RVT5_9ROSI	7.0e-50	49.32	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026328mg PE=4 SV=1	[more]

BLAST of CmaCh04G007570 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G50870.1	5.7e-43	43.62	GATA type zinc finger transcription factor family protein	[more]
AT4G36620.1	4.7e-37	47.30	GATA transcription factor 19	[more]
AT2G18380.1	1.7e-26	41.33	GATA transcription factor 20	[more]
AT4G26150.1	1.6e-13	52.24	cytokinin-responsive gata factor 1	[more]
AT5G56860.1	1.2e-11	70.73	GATA type zinc finger transcription factor family protein	[more]

BLAST of CmaCh04G007570 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659102361\|ref\|XP_008452087.1\|	2.6e-90	71.79	PREDICTED: GATA transcription factor 18-like [Cucumis melo]	[more]
gi\|778690730\|ref\|XP_004146553.2\|	8.5e-89	70.25	PREDICTED: GATA transcription factor 18-like [Cucumis sativus]	[more]
gi\|147792212\|emb\|CAN72981.1\|	4.4e-53	52.81	hypothetical protein VITISV_009032 [Vitis vinifera]	[more]
gi\|731387122\|ref\|XP_010649139.1\|	4.4e-53	52.81	PREDICTED: GATA transcription factor 18-like [Vitis vinifera]	[more]
gi\|645273031\|ref\|XP_008241682.1\|	2.4e-51	49.82	PREDICTED: GATA transcription factor 19-like [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000679	Znf_GATA
IPR013088	Znf_NHR/GATA

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0008270	zinc ion binding
GO:0043565	sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G007570.1	CmaCh04G007570.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000679	Zinc finger, GATA-type	PFAM	PF00320	GATA	coord: 126..160 score: 6.2
IPR000679	Zinc finger, GATA-type	SMART	SM00401	GATA_3	coord: 120..172 score: 8.5
IPR000679	Zinc finger, GATA-type	PROSITE	PS00344	GATA_ZN_FINGER_1	coord: 126..151 scor
IPR000679	Zinc finger, GATA-type	PROFILE	PS50114	GATA_ZN_FINGER_2	coord: 120..156 score: 1
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	G3DSA:3.30.50.10		coord: 124..160 score: 5.3
None	No IPR available	PANTHER	PTHR10071	TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR	coord: 12..165 score: 5.2
None	No IPR available	PANTHER	PTHR10071:SF156	GATA TRANSCRIPTION FACTOR 18-RELATED	coord: 12..165 score: 5.2
None	No IPR available	unknown	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 123..160 score: 5.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G007570	Cucsa.106490	Cucumber (Gy14) v1	cgycmaB0246
CmaCh04G007570	Cla014213	Watermelon (97103) v1	cmawmB715
CmaCh04G007570	Cla014581	Watermelon (97103) v1	cmawmB677
CmaCh04G007570	Csa4G046650	Cucumber (Chinese Long) v2	cmacuB713
CmaCh04G007570	MELO3C016391	Melon (DHL92) v3.5.1	cmameB694
CmaCh04G007570	MELO3C007831	Melon (DHL92) v3.5.1	cmameB710
CmaCh04G007570	ClCG07G008580	Watermelon (Charleston Gray)	cmawcgB668
CmaCh04G007570	ClCG01G019610	Watermelon (Charleston Gray)	cmawcgB639
CmaCh04G007570	CSPI04G05430	Wild cucumber (PI 183967)	cmacpiB721
CmaCh04G007570	CSPI06G31020	Wild cucumber (PI 183967)	cmacpiB785
CmaCh04G007570	CmoCh04G008070	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G007570	CmoCh03G007750	Cucurbita moschata (Rifu)	cmacmoB727
CmaCh04G007570	Lsi07G002510	Bottle gourd (USVL1VR-Ls)	cmalsiB698
CmaCh04G007570	Cp4.1LG10g00610	Cucurbita pepo (Zucchini)	cmacpeB702
CmaCh04G007570	Cp4.1LG01g07010	Cucurbita pepo (Zucchini)	cmacpeB731
CmaCh04G007570	MELO3C016391.2	Melon (DHL92) v3.6.1	cmamedB782
CmaCh04G007570	CsaV3_4G005580	Cucumber (Chinese Long) v3	cmacucB0847
CmaCh04G007570	Cla97C01G018990	Watermelon (97103) v2	cmawmbB712
CmaCh04G007570	Cla97C07G135600	Watermelon (97103) v2	cmawmbB774
CmaCh04G007570	Bhi01G001824	Wax gourd	cmawgoB0855
CmaCh04G007570	CsGy4G005320	Cucumber (Gy14) v2	cgybcmaB547
CmaCh04G007570	Carg14155	Silver-seed gourd	carcmaB1288

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh04G007570	CmaCh07G004870	Cucurbita maxima (Rimu)	cmacmaB546

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G007570	Wax gourd	cmawgoB0846
CmaCh04G007570	Cucurbita maxima (Rimu)	cmacmaB350
CmaCh04G007570	Cucurbita moschata (Rifu)	cmacmoB700
CmaCh04G007570	Cucurbita pepo (Zucchini)	cmacpeB714
CmaCh04G007570	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G007570	Cucurbita pepo (Zucchini)	cmacpeB741
CmaCh04G007570	Silver-seed gourd	carcmaB1414