BLAST of Lsi07G001960 vs. Swiss-Prot
Match:
VIP5_ARATH (Protein RTF1 homolog OS=Arabidopsis thaliana GN=VIP5 PE=1 SV=1)
HSP 1 Score: 805.4 bits (2079), Expect = 4.6e-232
Identity = 461/666 (69.22%), Postives = 541/666 (81.23%), Query Frame = 1
Query: 21 MADLENLLLEAAGRTNAAGRNRHSHAPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 80
M DLENLLLEAAGRTN+AGR+RH PS R+REGSYSD SDSRDD SD+DRGYASRKPS
Sbjct: 1 MGDLENLLLEAAGRTNSAGRSRHP--PSSRRREGSYSDGSSDSRDD-SDEDRGYASRKPS 60
Query: 81 GSQVPLKKRLDPAERDDDVGSQEEGEDEDVGSEREGDTSDESDVGDDLYKDDDDRRKLAG 140
GSQVPLKKRL+ AER+D ++ EG D S+REGD+S+ESD GDDLYK+++DR+KLAG
Sbjct: 61 GSQVPLKKRLE-AEREDRA-ARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAG 120
Query: 141 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKTAPSRKETPPLPSSR-IRSSARSADR 200
M+E QREMILS+RA KK DK+ E LR+K + KT S+KET PLP+SR +RSSARSADR
Sbjct: 121 MTEFQREMILSERADKKGDKNFTEKLRSKRESEKTPVSKKETQPLPASRGVRSSARSADR 180
Query: 201 AAAKDDALNELRAKRLKQQDPEAHRKLRDSSRGNANNRRFSPTKRKPFTAPSLSSSSQSE 260
AAAKDDALNELRAKR+KQQDP A RKLRD+S+G + +R FS TKRKP + +LSSSSQS+
Sbjct: 181 AAAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSTKRKPLASSNLSSSSQSD 240
Query: 261 SESRFQSEDEGSTGDGGMIDSDDERSMPGSDGPTFENIKEITIRRSKLAKWLMEPFFEDL 320
S+SR QS+DEGS +GGM+DSDD+RS D PTFE++KE+TIRRSKLAKWLMEPFFE+L
Sbjct: 241 SDSRSQSDDEGS--NGGMLDSDDDRS----DVPTFEDVKEVTIRRSKLAKWLMEPFFEEL 300
Query: 321 IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARW 380
IVGCFVRVGIGRS+SGPIYRLC V+NVDAT+PD+ YKLENK THKYLNV+WGNE+SAARW
Sbjct: 301 IVGCFVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARW 360
Query: 381 QMAMVSDSAPLEEEYKQWVKEVERTGGRMLSKQDILDKKEAIQKVNNFVYSAATVKQMLQ 440
QMAM+SD PLEEEY+QW++EVERT GRM +KQDI +KKEAIQ+ N+FVYSA TVKQMLQ
Sbjct: 361 QMAMISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRTNSFVYSAETVKQMLQ 420
Query: 441 EKKSASARPLNIAAEKDRLRREMDVALSKNDEAEVERIKARLQQLEASRRLQMKDAKAIR 500
EKKSAS RP+N+AAEKDRLR+E+++A SKNDEA VERIK++++QL+ASR + D KA++
Sbjct: 421 EKKSASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKSKIKQLDASRNKKGVDKKALK 480
Query: 501 LAEMNRKNRVENFKNASELRPM-KDLKAGEAGYDPFSRRWTRSRNYY----VSNAGEAIE 560
LAEMN+KNR ENFKNASE++ + LKAGEAGYDPFSRRWTRS NYY GE E
Sbjct: 481 LAEMNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYYNGKNKGKDGEENE 540
Query: 561 AAEAAGNSDNVTPASDSTRTVSGGTADAGMAATAAALEAAAGAGKLVDTNAPVDGGTESN 620
AA AA N G A AG+ AT AALEAAA AGKL+DT AP+ G E N
Sbjct: 541 AAVAAAVETN------------GADAGAGVEATEAALEAAAEAGKLIDTRAPIGQGAEHN 600
Query: 621 SLHNFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYK 680
LHNFEL +SL LQK+GG G Q F+ARKQ EATVG +V ENDG+RH LTLTVSDYK
Sbjct: 601 QLHNFELSLSLTALQKYGGPQGVQKAFMARKQLTEATVGCRVAENDGKRHGLTLTVSDYK 643
BLAST of Lsi07G001960 vs. Swiss-Prot
Match:
RTF1_HUMAN (RNA polymerase-associated protein RTF1 homolog OS=Homo sapiens GN=RTF1 PE=1 SV=4)
HSP 1 Score: 99.0 bits (245), Expect = 2.1e-19
Identity = 167/664 (25.15%), Postives = 283/664 (42.62%), Query Frame = 1
Query: 35 TNAAGRNRHSHAPSRRQREGSYS-DAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPA 94
T + +N+ + +++G+ A + SD D S P +V
Sbjct: 105 TFGSNKNKKKGKARKIEKKGTMKKQANKTASSGSSDKDSSAESSAPEEGEVS-------- 164
Query: 95 ERDDDVGSQEEGEDEDVGSEREGDTSDESDVGDDLYKDDDDRRKLAGMSELQREMILSDR 154
D D S D D SE D G+DL D++DR +L M+E +RE L +R
Sbjct: 165 --DSDSNSSSSSSDSDSSSE---DEEFHDGYGEDLMGDEEDRARLEQMTEKEREQELFNR 224
Query: 155 ASK----KNDKHLYESLRAKMDKGKTAPSRKETPPLPSSRIRSSARSADRAAAKDDALNE 214
K K + + L+ K K +K+ ++ S + K E
Sbjct: 225 IEKREVLKRRFEIKKKLKTAKKKEKKEKKKKQEEEQEKKKLTQIQESQVTSHNK-----E 284
Query: 215 LRAKRLKQQDP--EAHRKLRDSSRGNANNRRFSPTKRKPFTAPSLSSSSQSESESRFQSE 274
R+KR ++ D +A +L+ N K++P + S + E E SE
Sbjct: 285 RRSKRDEKLDKKSQAMEELKAEREKRKNRTAELLAKKQPLKTSEVYSDDEEEEEDDKSSE 344
Query: 275 DEGSTGDGGMIDSDDERS-MPGSDGPTF--ENIKEITIRRSKLAKWLMEPFFEDLIVGCF 334
+ D ++E+ +P P E + + + R KL +W PFF + GCF
Sbjct: 345 KSDRSSRTSSSDEEEEKEEIPPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCF 404
Query: 335 VRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQMAMV 394
VR+GIG S P+YR+ + V E + Y+L T+K L + GN+ R + V
Sbjct: 405 VRIGIGNHNSKPVYRVAEITGV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFV 464
Query: 395 SDSAPLEEEYKQWVKEVERTGGRMLSKQDILDKKE-AIQKVNNFVYSAATVKQMLQEKKS 454
S+ E E+ +W KE + G L D ++KKE +I++ N+ ++ ++++++EK+
Sbjct: 465 SNQEFTESEFMKW-KEAMFSAGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKER 524
Query: 455 ASARPLNIAAEKDRLRREMDVALSKNDEAEVERIKARLQQL----EASRRLQMKDAKAIR 514
P N A +K +L +E +A D+ + ++I+ +L +L EA R + K+ AI
Sbjct: 525 FRKAPPNYAMKKTQLLKEKAMAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI- 584
Query: 515 LAEMNRKNRVENFKNASELRPMKDLKAGEAGYDPFSRRWTRSRNYYVSNAGE-AIEAAEA 574
+ +N++NR N + + + DPF+RR + + VSN+ + A++AA
Sbjct: 585 -SYINQRNREWNIVESEKALVAESHNMKNQQMDPFTRR--QCKPTIVSNSRDPAVQAA-- 644
Query: 575 AGNSDNVTPASDSTRTVSGGTADAGMAATAAALEAAAGAGKLVDTN--APVDGGTESNSL 634
A + + SG D A E + G GK D N + D + +
Sbjct: 645 -------ILAQLNAKYGSGVLPD-------APKEMSKGQGKDKDLNSKSASDLSEDLFKV 704
Query: 635 HNFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRR 681
H+F++ I L + AL A + P DG +L + DYK+R
Sbjct: 705 HDFDVKIDLQVPSSESKAL--------------AITSKAPPAKDGAPRR-SLNLEDYKKR 710
BLAST of Lsi07G001960 vs. Swiss-Prot
Match:
RTF1_MOUSE (RNA polymerase-associated protein RTF1 homolog OS=Mus musculus GN=Rtf1 PE=1 SV=1)
HSP 1 Score: 96.3 bits (238), Expect = 1.4e-18
Identity = 165/664 (24.85%), Postives = 283/664 (42.62%), Query Frame = 1
Query: 35 TNAAGRNRHSHAPSRRQREGSYS-DAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPA 94
T + +N+ + +++G+ A + SD D S P +V
Sbjct: 110 TFGSNKNKKKGKTRKVEKKGAMKKQANKAASSGSSDRDSSAESSAPEEGEVS-------- 169
Query: 95 ERDDDVGSQEEGEDEDVGSEREGDTSDESDVGDDLYKDDDDRRKLAGMSELQREMILSDR 154
D + S D D SE D G+DL D++DR +L M+E +RE L +R
Sbjct: 170 --DSESSSSSSSSDSDSSSE---DEEFHDGYGEDLMGDEEDRARLEQMTEKEREQELFNR 229
Query: 155 ASK----KNDKHLYESLRAKMDKGKTAPSRKETPPLPSSRIRSSARSADRAAAKDDALNE 214
K K + + L+ K K +K+ ++ S + K E
Sbjct: 230 IEKREVLKRRFEIKKKLKTAKKKEKKEKKKKQEEEQEKKKLTQIQESQVTSHNK-----E 289
Query: 215 LRAKRLKQQDP--EAHRKLRDSSRGNANNRRFSPTKRKPFTAPSLSSSSQSESESRFQSE 274
R+KR ++ D +A +L+ N K++P + S + E + SE
Sbjct: 290 RRSKRDEKLDKKSQAMEELKAEREKRKNRTAELLAKKQPLKTSEVYSDDEEEEDDDKSSE 349
Query: 275 DEGSTGDGGMIDSDDERS-MPGSDGPTF--ENIKEITIRRSKLAKWLMEPFFEDLIVGCF 334
+ D ++E+ +P P E + + + R KL +W PFF + GCF
Sbjct: 350 KSDRSSRTSSSDEEEEKEEIPPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCF 409
Query: 335 VRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQMAMV 394
VR+GIG S P+YR+ + V E + Y+L T+K L + GN+ R + V
Sbjct: 410 VRIGIGNHNSKPVYRVAEITGV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFV 469
Query: 395 SDSAPLEEEYKQWVKEVERTGGRMLSKQDILDKKE-AIQKVNNFVYSAATVKQMLQEKKS 454
S+ E E+ +W KE + G L D ++KKE +I++ N+ ++ ++++++EK+
Sbjct: 470 SNQEFTESEFMKW-KEAMFSAGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKER 529
Query: 455 ASARPLNIAAEKDRLRREMDVALSKNDEAEVERIKARLQQL----EASRRLQMKDAKAIR 514
P N A +K +L +E +A D+ + ++I+ +L +L EA R + K+ AI
Sbjct: 530 FRKAPPNYAMKKTQLLKEKAMAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI- 589
Query: 515 LAEMNRKNRVENFKNASELRPMKDLKAGEAGYDPFSRRWTRSRNYYVSNAGE-AIEAAEA 574
+ +N++NR N + + + DPF+RR + + VSN+ + A++AA
Sbjct: 590 -SYINQRNREWNIVESEKALVAESHNMRNQQMDPFTRR--QCKPTIVSNSRDPAVQAA-- 649
Query: 575 AGNSDNVTPASDSTRTVSGGTADAGMAATAAALEAAAGAGKLVDTNAPV--DGGTESNSL 634
A + + SG D A E + G GK D N+ D + +
Sbjct: 650 -------ILAQLNAKYGSGVLPD-------APKEMSKGQGKDKDLNSKTASDLSEDLFKV 709
Query: 635 HNFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRR 681
H+F++ I L + AL A + P DG +L + DYK+R
Sbjct: 710 HDFDVKIDLQVPSSESKAL--------------AITSKAPPAKDGAPRR-SLNLEDYKKR 715
BLAST of Lsi07G001960 vs. Swiss-Prot
Match:
RTF1_PONAB (RNA polymerase-associated protein RTF1 homolog (Fragment) OS=Pongo abelii GN=RTF1 PE=2 SV=2)
HSP 1 Score: 88.6 bits (218), Expect = 2.9e-16
Identity = 153/609 (25.12%), Postives = 263/609 (43.19%), Query Frame = 1
Query: 35 TNAAGRNRHSHAPSRRQREGSYS-DAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPA 94
T + +N+ + +++G+ A + SD D S P +V
Sbjct: 100 TFGSNKNKKKGKARKIEKKGTMKKQANKTASSGSSDKDSSAESSAPEEGEVS-------- 159
Query: 95 ERDDDVGSQEEGEDEDVGSEREGDTSDESDVGDDLYKDDDDRRKLAGMSELQREMILSDR 154
D D S D D SE D G+DL D++DR +L M+E +RE L +R
Sbjct: 160 --DSDSNSSSSSSDSDSSSE---DEEFHDGYGEDLMGDEEDRARLEQMTEKEREQELFNR 219
Query: 155 ASK----KNDKHLYESLRAKMDKGKTAPSRKETPPLPSSRIRSSARSADRAAAKDDALNE 214
K K + + L+ K K +K+ ++ S + K E
Sbjct: 220 IEKREVLKRRFEIKKKLKTAKKKEKKEKKKKQEEEQEKKKLTQIQESQVTSHNK-----E 279
Query: 215 LRAKRLKQQDP--EAHRKLRDSSRGNANNRRFSPTKRKPFTAPSLSSSSQSESESRFQSE 274
R+KR ++ D +A +L+ N K++P + S + E E SE
Sbjct: 280 RRSKRDEKLDKKSQAMEELKAEREKRKNRTVELLAKKQPLKTSEVYSDDEEEEEDDKSSE 339
Query: 275 DEGSTGDGGMIDSDDERS-MPGSDGPTF--ENIKEITIRRSKLAKWLMEPFFEDLIVGCF 334
+ D ++E+ +P P E + + + R KL +W PFF + GCF
Sbjct: 340 KSDRSSRTSSSDEEEEKEEIPPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCF 399
Query: 335 VRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQMAMV 394
VR+GIG S P+YR+ + V E + Y+L T+K L + GN+ R + V
Sbjct: 400 VRIGIGNHNSKPVYRVAEITGV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFV 459
Query: 395 SDSAPLEEEYKQWVKEVERTGGRMLSKQDILDKKE-AIQKVNNFVYSAATVKQMLQEKKS 454
S+ E E+ +W KE + G L D ++KKE +I++ N+ ++ ++++++EK+
Sbjct: 460 SNQEFTESEFMKW-KEAMFSAGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKER 519
Query: 455 ASARPLNIAAEKDRLRREMDVALSKNDEAEVERIKARLQQL----EASRRLQMKDAKAIR 514
P N A +K +L +E +A D+ + ++I+ +L +L EA R + K+ AI
Sbjct: 520 FRKAPPNYAMKKTQLLKEKAMAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI- 579
Query: 515 LAEMNRKNRVENFKNASELRPMKDLKAGEAGYDPFSRRWTRSRNYYVSNAGE-AIEAAEA 574
+ +N++NR N + + + DPF+RR + + VSN+ + A++AA
Sbjct: 580 -SYINQRNREWNIVESEKALVAESHNMKNQQMDPFTRR--QCKPTIVSNSRDPAVQAA-- 639
Query: 575 AGNSDNVTPASDSTRTVSGGTADAGMAATAAALEAAAGAGKLVDTN--APVDGGTESNSL 626
A + + SG D A E + G GK D N + D + +
Sbjct: 640 -------ILAQLNAKYGSGVLPD-------APKEMSKGQGKDKDLNSKSASDLSEDLFKV 665
BLAST of Lsi07G001960 vs. Swiss-Prot
Match:
RTF1_CAEEL (RNA polymerase-associated protein RTF1 homolog OS=Caenorhabditis elegans GN=rtfo-1 PE=2 SV=1)
HSP 1 Score: 80.1 bits (196), Expect = 1.0e-13
Identity = 146/587 (24.87%), Postives = 248/587 (42.25%), Query Frame = 1
Query: 65 DDDSDDDRGYASRKPSGSQVPLKKRLDPAERDDDVGSQE----EGEDEDVGSEREGDTSD 124
D DSD D G KP + D + D D + + + R +SD
Sbjct: 22 DSDSDSDAGPKPGKPLST--------DSSASDSDAEKPQAKPAKKKTLTKRKRRATGSSD 81
Query: 125 ESDVGDDLYKDDDDRRKLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKTAPSRK 184
+ V DDL+ D +D+ + ++EL++E + +R + + E + ++ K S K
Sbjct: 82 DDQVDDDLFADKEDKARWKKLTELEKEQEIFERMEARENAIAREEIAQQLAKKAKKSSEK 141
Query: 185 ETPPLPSSRIRSSARSAD--RAAAKDDALNELRAKRLKQQDPEAHRKLRDSSRGNANNRR 244
++ S A + A D+ +E+ A + D K +++ N R+
Sbjct: 142 GVKTEKRRKMNSGGSDAGSPKRKASSDSDSEMDAAFHRPSDINRKHKEKNAMDALKNKRK 201
Query: 245 FSPTKRKP---------FTAPSLSSSSQSESESRFQSEDEGSTGDGGMIDSDDERSMPGS 304
K F A S SSSS S SES S + + + D +
Sbjct: 202 EIEKKNAKNEALSIDAVFGANSGSSSSSSSSESSRSSSSSRESSPERVSEKD---KIVKK 261
Query: 305 DGPTFENIKEITIRRSKLAKWLMEPFFEDLIVGCFVRVGIGR-SRSGPIYRLCLVRNVDA 364
D ++ + R KL+ + PFF+ +VGC+VR+G G+ S SG YR+ + V+
Sbjct: 262 DVDGLSELRRARLSRHKLSLMIHAPFFDSTVVGCYVRLGQGQMSGSGSKYRIWKIVGVE- 321
Query: 365 TEPDRQYKLENKITHKYLNVIWGNESSAARWQMAMVSDSAPLEEEYKQWVKEVERTGGRM 424
E ++ Y+LE K T+K + N S ++M VS++ + E+ +W+ +R G
Sbjct: 322 -ESNKVYELEGKKTNKIIKC--QNGGSERPFRMQFVSNADFEQIEFDEWLLACKRHGN-- 381
Query: 425 LSKQDILD-KKEAIQKVNNFVYSAATVKQMLQEKKSASARPLNIAAEKDRLRREMDVALS 484
L DI+D KK+ I+K N YS V M++EK P N A K ++ ++A
Sbjct: 382 LPTVDIMDKKKQDIEKAINHKYSDKEVDLMIKEKSKYQTVPRNFAMTKANWSKQKELAQQ 441
Query: 485 KNDEAEVERIKARLQQLE-ASRRLQMKDAKAI-RLAEMNRKNRVENFKNASELRPMKDLK 544
+ D E E+I+ ++ ++E + L+ + +K+I +A +N +NR + LK
Sbjct: 442 RGDIREAEQIQTKIDEIERQADELEKERSKSISAIAFINHRNR----SKIKDQVLSGQLK 501
Query: 545 AGEAGY-DPFSRRWTRSRNYYVSNAGEAIEAAEAAGNSDNVTPASDSTRTVSGGTADAGM 604
E DPF+R+ G + + D AS ST +S G D
Sbjct: 502 IEENSQDDPFTRK-----------KGGMRVVSGSKSRLDGTLSASSSTTNLSDGGKDKSS 561
Query: 605 AATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFELPISLAMLQKF 632
+ + + T+ +SLH+F+L I L L+ F
Sbjct: 562 SLAKPTQP---------PPSTQIKKKTDISSLHDFDLDIDLGKLKDF 567
BLAST of Lsi07G001960 vs. TrEMBL
Match:
A0A0A0KXW1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G038650 PE=4 SV=1)
HSP 1 Score: 1181.4 bits (3055), Expect = 0.0e+00
Identity = 633/660 (95.91%), Postives = 652/660 (98.79%), Query Frame = 1
Query: 21 MADLENLLLEAAGRTNAAGRNRHSHAPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 80
MADLENLLLEAAGRTNAAGRNRHSH PSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS
Sbjct: 1 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
Query: 81 GSQVPLKKRLDPAERDDDVGSQEEGEDEDVGSEREGDTSDESDVGDDLYKDDDDRRKLAG 140
GSQVPLKKRLDP ERDDD GSQEEGEDEDVGSEREGD+SDESDVGDDLYKDDDDRRKLAG
Sbjct: 61 GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
Query: 141 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKTAPSRKETPPLPSSRIRSSARSADRA 200
MSELQREMILSDRASKKNDKHLYESLRAKMDKGK+APSRKETPPLPSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180
Query: 201 AAKDDALNELRAKRLKQQDPEAHRKLRDSSRGNANNRRFSPTKRKPFTAPSLSSSSQSES 260
AAKDDALNELRAKRLKQQDPEAHRKLRD+SRGNAN+RRFSPTKRKPFTAPSLSSSSQSES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240
Query: 261 ESRFQSEDEGSTGDGGMIDSDDERSMPGSDGPTFENIKEITIRRSKLAKWLMEPFFEDLI 320
ESRFQS+DEGSTGDGGMIDSDDERS+PGSDGPTFE+IKE+TIRRSKLAKWLMEPFFE+LI
Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300
Query: 321 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 380
VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNE+SAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360
Query: 381 MAMVSDSAPLEEEYKQWVKEVERTGGRMLSKQDILDKKEAIQKVNNFVYSAATVKQMLQE 440
MAMVSDSAPLE+EYKQWVKEVERTGGRMLSKQDIL+KKEAIQKVNNFVYSAATVKQMLQ+
Sbjct: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420
Query: 441 KKSASARPLNIAAEKDRLRREMDVALSKNDEAEVERIKARLQQLEASRRLQMKDAKAIRL 500
KKSASARPLNIAAEKDRLRREMDVA+SKNDEAEVERIK RLQQLEASRRLQMKDAKAIRL
Sbjct: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480
Query: 501 AEMNRKNRVENFKNASELRPMKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEAIEAAEAAG 560
AEMNRKNRVENFKNASELRP+KDLKAGEAGYDPFSRRWTRSRNYYVSNAGEA AAEAAG
Sbjct: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540
Query: 561 NSDNVTPASDSTRTVSGGTADAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 620
NSDNVTPA ++TRT +GGT+DAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE
Sbjct: 541 NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600
Query: 621 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 680
LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660
BLAST of Lsi07G001960 vs. TrEMBL
Match:
W9RDA9_9ROSA (RNA polymerase-associated protein RTF1-like protein OS=Morus notabilis GN=L484_012115 PE=4 SV=1)
HSP 1 Score: 938.3 bits (2424), Expect = 5.1e-270
Identity = 526/663 (79.34%), Postives = 581/663 (87.63%), Query Frame = 1
Query: 21 MADLENLLLEAAGRTNAAGRNRHSHAPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 80
MA+LENLLLEAAGRT +AGRNRHS PSRR+REGSYSD GSDSRDDDSDDDRGYA+RKPS
Sbjct: 1 MAELENLLLEAAGRTRSAGRNRHSIPPSRRRREGSYSDGGSDSRDDDSDDDRGYANRKPS 60
Query: 81 GSQVPLKKRLDPAERDDDVGSQEEGEDEDVGSEREGDTSDESDVGDDLYKDDDDRRKLAG 140
GSQVPLKKRLDP E DDD GS+EEG+D D GS+REGD+ ESDVG DLYKDDDDRRKLA
Sbjct: 61 GSQVPLKKRLDPTEMDDDQGSEEEGDD-DRGSDREGDS--ESDVGSDLYKDDDDRRKLAE 120
Query: 141 MSELQREMILSDRASKKNDKHLYESLRAKMD-KGKTAPSRKETPPLPSSRIRSSARSADR 200
M+ELQREMIL DRASKK DK+L E LR K D KGK SRKET PLPSSR+RSSARSADR
Sbjct: 121 MTELQREMILLDRASKKEDKNLKEKLRPKWDNKGKATQSRKET-PLPSSRVRSSARSADR 180
Query: 201 AAAKDDALNELRAKRLKQQDPEAHRKLRDSSRGNANNRRFSPTKRKPFTAPSLSSSSQSE 260
AAAKDDALNELRAKRLKQQDPEAH KLRD+SRG + +R KRK +TA SLSSSSQS+
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHGKLRDASRGGSGSRNLLHNKRKSYTATSLSSSSQSD 240
Query: 261 SESRFQSEDEGSTGDGGMIDSDDERSMPGSDGPTFENIKEITIRRSKLAKWLMEPFFEDL 320
SES QSEDEGSTGDGGMIDSDDER +PGS+G TF++IKE+T+RRSKLAKWLMEPFFE+L
Sbjct: 241 SESESQSEDEGSTGDGGMIDSDDERGIPGSEGLTFDDIKEVTVRRSKLAKWLMEPFFEEL 300
Query: 321 IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARW 380
IVGCFVRVGIGRS+SGPIYRLC+VRNVDA+EPDRQYKL+NKITHKYLNV+WGNE+SAARW
Sbjct: 301 IVGCFVRVGIGRSKSGPIYRLCMVRNVDASEPDRQYKLDNKITHKYLNVVWGNENSAARW 360
Query: 381 QMAMVSDSAPLEEEYKQWVKEVERTGGRMLSKQDILDKKEAIQKVNNFVYSAATVKQMLQ 440
QMAMVSDS P EEE+KQWV+EVER+GGRM +K DILDKKE+I+K+N FVYSAATVKQMLQ
Sbjct: 361 QMAMVSDSVPNEEEFKQWVREVERSGGRMPTKHDILDKKESIKKINTFVYSAATVKQMLQ 420
Query: 441 EKKSASARPLNIAAEKDRLRREMDVALSKNDEAEVERIKARLQQLEASRRLQMKDAKAIR 500
EKKSASARPLNIA EKDRLRRE++VA SKNDE EV+RIK RLQ+LEASR+ + DAKAIR
Sbjct: 421 EKKSASARPLNIALEKDRLRRELEVAQSKNDEVEVDRIKTRLQELEASRKAKQTDAKAIR 480
Query: 501 LAEMNRKNRVENFKNASELRPMK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEAIEAAEA 560
LAEMNRKNRVENFKNASEL+P+ LKAGEAGYDPFSRRWTRSRNYYV GE E + A
Sbjct: 481 LAEMNRKNRVENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVGKPGEVKEDSGA 540
Query: 561 -AGNSDNVTPASDSTRTVSGGTADAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLH 620
AGN+ T A ++ R A+AG+AAT AALEAAA AGKLVDTNAPVD GT SN LH
Sbjct: 541 NAGNNGASTDAENNGRH-GIVAAEAGIAATEAALEAAADAGKLVDTNAPVDQGTVSNMLH 600
Query: 621 NFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRR 680
NFELPISL++LQKFGG GAQAGF+ARKQRIEATVG +VPENDGRRHALTL+V DYKRRR
Sbjct: 601 NFELPISLSVLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLSVGDYKRRR 658
BLAST of Lsi07G001960 vs. TrEMBL
Match:
A0A067JDU6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21409 PE=4 SV=1)
HSP 1 Score: 933.3 bits (2411), Expect = 1.6e-268
Identity = 517/662 (78.10%), Postives = 583/662 (88.07%), Query Frame = 1
Query: 21 MADLENLLLEAAGRTNAAGRNRHSHAPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 80
MADLENLLLEAAGRT ++GRNR++H PSRR+REGSYSD GSDSRD+DSDDDRGYASRKPS
Sbjct: 1 MADLENLLLEAAGRTGSSGRNRNAHPPSRRRREGSYSDGGSDSRDEDSDDDRGYASRKPS 60
Query: 81 GSQVPLKKRLDPAERDDDVGSQEEGEDEDVGSEREGDTSDESDVGDDLYKDDDDRRKLAG 140
GSQVPLKKRLDPAERDDD GSQEEG +D S+REGD+SDESDVGDDLYKD+DDRRKLA
Sbjct: 61 GSQVPLKKRLDPAERDDDQGSQEEGGYDDGASDREGDSSDESDVGDDLYKDEDDRRKLAQ 120
Query: 141 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKTAPSRKETPPLPSSR-IRSSARSADR 200
MSEL+REMILS+RA KK DK+L E +R+K D + SRKETPPLPSSR +R+SARSADR
Sbjct: 121 MSELEREMILSERADKKGDKNLTERIRSKRDSERATRSRKETPPLPSSRGVRTSARSADR 180
Query: 201 AAAKDDALNELRAKRLKQQDPEAHRKLRDSSRGNANNRRFSPTKRKPFTAPSLSSSSQSE 260
AAAKDDALNELRAKRLKQQDPEAHRKLRD SRG + +R SP +RK FT+ SLSSSS SE
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDVSRGTSGSRGVSPVRRKRFTSASLSSSS-SE 240
Query: 261 SESRFQSEDEGSTGDGGMIDSDDERSMPGSDGPTFENIKEITIRRSKLAKWLMEPFFEDL 320
S+SR SEDE STGDGGM DSD++R PGS+G T+++I+E+TIRRSKLAKWLMEP+FE+L
Sbjct: 241 SDSRSHSEDEASTGDGGMADSDEDRE-PGSEGLTYDDIREVTIRRSKLAKWLMEPWFEEL 300
Query: 321 IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARW 380
IVGCFVRVGIGRS+SGPIYRLCLVRNVDA +PDR YKLENK T+KYLNVIWGNESSAARW
Sbjct: 301 IVGCFVRVGIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAARW 360
Query: 381 QMAMVSDSAPLEEEYKQWVKEVERTGGRMLSKQDILDKKEAIQKVNNFVYSAATVKQMLQ 440
QMAMVSDSAP E+EYKQWV+EVER+GGRM +KQDIL+KKEAI+K N FVYSAATVKQMLQ
Sbjct: 361 QMAMVSDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIKKSNTFVYSAATVKQMLQ 420
Query: 441 EKKSASARPLNIAAEKDRLRREMDVALSKNDEAEVERIKARLQQLEASRRLQMKDAKAIR 500
EKKSAS RPLN+AAEKDRLRRE++VA K D+AEVERI+AR+Q+LEASR+ Q KDAKAIR
Sbjct: 421 EKKSASTRPLNVAAEKDRLRRELEVAQMKQDDAEVERIRARIQELEASRQAQEKDAKAIR 480
Query: 501 LAEMNRKNRVENFKNASELRPMK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEAIEAAEA 560
LAEMNRKNR ENF+NASEL+P+ LKAGEAGYDPFSRRWTRSRNYYVS G A AAEA
Sbjct: 481 LAEMNRKNRAENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPGGADVAAEA 540
Query: 561 AGNSDNVTPASDSTRTVSGGTADAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHN 620
N++ + S +G A+AGMAATAAALEAAA AGKLVDT APVD GTESN+LH+
Sbjct: 541 --NNNGTAAVAHSNGAATGTLAEAGMAATAAALEAAADAGKLVDTAAPVDQGTESNTLHD 600
Query: 621 FELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRG 680
F+LPISL L+KFGGA GA+AGF+ARKQ+IEATVG +VPENDGRRHALTLTVSDYKRRRG
Sbjct: 601 FDLPISLTALEKFGGAKGAKAGFMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRRG 658
BLAST of Lsi07G001960 vs. TrEMBL
Match:
A0A061GFX4_THECC (PAF1 complex component isoform 1 OS=Theobroma cacao GN=TCM_029914 PE=4 SV=1)
HSP 1 Score: 928.3 bits (2398), Expect = 5.3e-267
Identity = 509/662 (76.89%), Postives = 573/662 (86.56%), Query Frame = 1
Query: 21 MADLENLLLEAAGRTNAAGRNRHSHAPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 80
MADLENLLLEAAGRT GRNRHS PSRR+REGSYSD GSDSRDDDSDDD GYASRKPS
Sbjct: 1 MADLENLLLEAAGRTGTGGRNRHSLPPSRRRREGSYSDGGSDSRDDDSDDDHGYASRKPS 60
Query: 81 GSQVPLKKRLDPAERDDDVGSQEEGEDEDVGSEREGDTSDESDVGDDLYKDDDDRRKLAG 140
GSQVPLKKRLDPAERDDD GSQEEG+ +D S EGD+SDESDVGDDLYK++DDRRKLA
Sbjct: 61 GSQVPLKKRLDPAERDDDQGSQEEGDYDDGVSVHEGDSSDESDVGDDLYKNEDDRRKLAQ 120
Query: 141 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKTAPSRKETPPLPSSR-IRSSARSADR 200
M+EL+RE+ILS+RA K+ DK E +R+K + + + SRKETPPLPSSR +RSSARSADR
Sbjct: 121 MTELERELILSERADKRGDKKFTEKIRSKRENDRPSRSRKETPPLPSSRGVRSSARSADR 180
Query: 201 AAAKDDALNELRAKRLKQQDPEAHRKLRDSSRGNANNRRFSPTKRKPFTAPSLSSSSQSE 260
AAAKDDALNELRAKRLKQQDPEAHRKLRD+SRG++ +R SP KRKPFTA SLSSSSQS+
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGSRGLSPVKRKPFTASSLSSSSQSD 240
Query: 261 SESRFQSEDEGSTGDGGMIDSDDERSMPGSDGPTFENIKEITIRRSKLAKWLMEPFFEDL 320
SESR SEDEGSTGDGGM+DSDD+R M G DGPTF++IKEITIRRSKLAKW MEPFFE+L
Sbjct: 241 SESRSNSEDEGSTGDGGMVDSDDDRGMQGPDGPTFDDIKEITIRRSKLAKWFMEPFFEEL 300
Query: 321 IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARW 380
IVGC+VRVGIGRS+SGPIYRLC+VRNVDATEP+R YKLENK T+KYLNV+WGNESSAARW
Sbjct: 301 IVGCYVRVGIGRSKSGPIYRLCMVRNVDATEPERTYKLENKTTYKYLNVVWGNESSAARW 360
Query: 381 QMAMVSDSAPLEEEYKQWVKEVERTGGRMLSKQDILDKKEAIQKVNNFVYSAATVKQMLQ 440
QMAM+SDS P EEE++Q ++E+ER+GGRM SKQD+L+KKEA+QK FVYSAATVKQMLQ
Sbjct: 361 QMAMISDSPPQEEEFRQLIRELERSGGRMPSKQDVLEKKEALQKAKTFVYSAATVKQMLQ 420
Query: 441 EKKSASARPLNIAAEKDRLRREMDVALSKNDEAEVERIKARLQQLEASRRLQMKDAKAIR 500
EKKS S+RPLNIAAEKDRLRR++++A SK+DEAEVERIK RLQQLEASR+ Q KDAKA+R
Sbjct: 421 EKKSTSSRPLNIAAEKDRLRRDLEIAQSKHDEAEVERIKMRLQQLEASRQAQEKDAKAVR 480
Query: 501 LAEMNRKNRVENFKNASELRPMK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEAIEAAEA 560
LAEMNRKNR ENFKNASEL+P+ LKAGEAGYDPFSRRWTRSRNYYV+ A AA A
Sbjct: 481 LAEMNRKNRAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVAKPPGADAAAVA 540
Query: 561 AGNSDNVTPASDSTRTVSGGTADAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHN 620
N D + + + A+AG AAT AAL+ AAGAGKLVDT+APVD GTESN LH+
Sbjct: 541 --NGDRIGVIASGNGNDARAAAEAGRAATVAALQEAAGAGKLVDTSAPVDEGTESNMLHD 600
Query: 621 FELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRG 680
FE+PISL LQ+FGG GA AGF+ARKQRIEATVG QVPENDGRRHALTLTVSDYKRRRG
Sbjct: 601 FEIPISLNALQRFGGPQGAVAGFMARKQRIEATVGCQVPENDGRRHALTLTVSDYKRRRG 660
BLAST of Lsi07G001960 vs. TrEMBL
Match:
B9RZ59_RICCO (RNA polymerase-associated protein RTF1, putative OS=Ricinus communis GN=RCOM_0935630 PE=4 SV=1)
HSP 1 Score: 922.9 bits (2384), Expect = 2.2e-265
Identity = 509/662 (76.89%), Postives = 577/662 (87.16%), Query Frame = 1
Query: 21 MADLENLLLEAAGRTNAAGRNRHSHAPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 80
MADLENLLLEAAGRT +GRNR++ PSRR+REGSYSD GSDSRDDDSDDDRGY+SRKPS
Sbjct: 1 MADLENLLLEAAGRTGTSGRNRNALPPSRRRREGSYSDGGSDSRDDDSDDDRGYSSRKPS 60
Query: 81 GSQVPLKKRLDPAERDDDVGSQEEGEDEDVGSEREGDTSDESDVGDDLYKDDDDRRKLAG 140
GSQVPLKKRLDP ERDDD GSQ+EG+ +D S+REGD+SD SDVG+DLYK++DDRRKLA
Sbjct: 61 GSQVPLKKRLDPTERDDDQGSQDEGDYDDGNSDREGDSSDGSDVGEDLYKNEDDRRKLAQ 120
Query: 141 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKTAPSRKETPPLPSSR-IRSSARSADR 200
MSEL+REMILS+RA KK DK+L E +R+K + +T SRKETPPLPSSR +R+SARSADR
Sbjct: 121 MSELEREMILSERADKKGDKNLTERIRSKRESERTTRSRKETPPLPSSRGVRTSARSADR 180
Query: 201 AAAKDDALNELRAKRLKQQDPEAHRKLRDSSRGNANNRRFSPTKRKPFTAPSLSSSSQSE 260
AAAKDDALNEL+A+RLKQQDPEAHRKLRD+SR + +R FSP KRK FT+ SLSSSS SE
Sbjct: 181 AAAKDDALNELKARRLKQQDPEAHRKLRDASRRGSGSRGFSPIKRKRFTSASLSSSS-SE 240
Query: 261 SESRFQSEDEGSTGDGGMIDSDDERSMPGSDGPTFENIKEITIRRSKLAKWLMEPFFEDL 320
SESR SEDEGSTGDGGM DSDD+ PGS GPTF++I+EITIRRSKLAKW MEP+FE+L
Sbjct: 241 SESRSHSEDEGSTGDGGMADSDDD-GEPGSQGPTFDDIREITIRRSKLAKWFMEPWFEEL 300
Query: 321 IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARW 380
IVGCFVRVGIGRS+SGPIYRLCLVRNVDA +PDR YKLENK T+KYLNVIWGNESSAARW
Sbjct: 301 IVGCFVRVGIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAARW 360
Query: 381 QMAMVSDSAPLEEEYKQWVKEVERTGGRMLSKQDILDKKEAIQKVNNFVYSAATVKQMLQ 440
QMAM+SDSAP E+EYKQWV+EVER+GGRM +KQDIL+KKEAI+K N FVYSAATVKQMLQ
Sbjct: 361 QMAMISDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIRKSNTFVYSAATVKQMLQ 420
Query: 441 EKKSASARPLNIAAEKDRLRREMDVALSKNDEAEVERIKARLQQLEASRRLQMKDAKAIR 500
EKKSAS+RPLN+AAEKDRLRRE++VA SK D+AEVERI+AR+Q+LEASR+ Q KDAKAIR
Sbjct: 421 EKKSASSRPLNVAAEKDRLRRELEVAQSKQDDAEVERIRARIQELEASRQTQGKDAKAIR 480
Query: 501 LAEMNRKNRVENFKNASELRPMK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEAIEAAEA 560
LAEMNRKNR ENF+NASEL+P+ LKAGEAGYDPFSRRWTRSRNYYVS AA
Sbjct: 481 LAEMNRKNRAENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPAGGDAAAAT 540
Query: 561 AGNSDNVTPASDSTRTVSGGTADAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHN 620
+ ++ T + +G +A+AGMAATAAALEAAA AGKLVDT APVD GTESN+LHN
Sbjct: 541 NNEASGTVAVANKTESAAGVSAEAGMAATAAALEAAADAGKLVDTAAPVDQGTESNTLHN 600
Query: 621 FELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRG 680
FELPISL LQKFGGA GAQAGF+ARKQRIEAT+G +V END +RH LTLTVSDYKRRRG
Sbjct: 601 FELPISLTALQKFGGAQGAQAGFMARKQRIEATIGCRVSENDEKRHVLTLTVSDYKRRRG 660
BLAST of Lsi07G001960 vs. TAIR10
Match:
AT1G61040.1 (AT1G61040.1 plus-3 domain-containing protein)
HSP 1 Score: 805.4 bits (2079), Expect = 2.6e-233
Identity = 461/666 (69.22%), Postives = 541/666 (81.23%), Query Frame = 1
Query: 21 MADLENLLLEAAGRTNAAGRNRHSHAPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 80
M DLENLLLEAAGRTN+AGR+RH PS R+REGSYSD SDSRDD SD+DRGYASRKPS
Sbjct: 1 MGDLENLLLEAAGRTNSAGRSRHP--PSSRRREGSYSDGSSDSRDD-SDEDRGYASRKPS 60
Query: 81 GSQVPLKKRLDPAERDDDVGSQEEGEDEDVGSEREGDTSDESDVGDDLYKDDDDRRKLAG 140
GSQVPLKKRL+ AER+D ++ EG D S+REGD+S+ESD GDDLYK+++DR+KLAG
Sbjct: 61 GSQVPLKKRLE-AEREDRA-ARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAG 120
Query: 141 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKTAPSRKETPPLPSSR-IRSSARSADR 200
M+E QREMILS+RA KK DK+ E LR+K + KT S+KET PLP+SR +RSSARSADR
Sbjct: 121 MTEFQREMILSERADKKGDKNFTEKLRSKRESEKTPVSKKETQPLPASRGVRSSARSADR 180
Query: 201 AAAKDDALNELRAKRLKQQDPEAHRKLRDSSRGNANNRRFSPTKRKPFTAPSLSSSSQSE 260
AAAKDDALNELRAKR+KQQDP A RKLRD+S+G + +R FS TKRKP + +LSSSSQS+
Sbjct: 181 AAAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSTKRKPLASSNLSSSSQSD 240
Query: 261 SESRFQSEDEGSTGDGGMIDSDDERSMPGSDGPTFENIKEITIRRSKLAKWLMEPFFEDL 320
S+SR QS+DEGS +GGM+DSDD+RS D PTFE++KE+TIRRSKLAKWLMEPFFE+L
Sbjct: 241 SDSRSQSDDEGS--NGGMLDSDDDRS----DVPTFEDVKEVTIRRSKLAKWLMEPFFEEL 300
Query: 321 IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARW 380
IVGCFVRVGIGRS+SGPIYRLC V+NVDAT+PD+ YKLENK THKYLNV+WGNE+SAARW
Sbjct: 301 IVGCFVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARW 360
Query: 381 QMAMVSDSAPLEEEYKQWVKEVERTGGRMLSKQDILDKKEAIQKVNNFVYSAATVKQMLQ 440
QMAM+SD PLEEEY+QW++EVERT GRM +KQDI +KKEAIQ+ N+FVYSA TVKQMLQ
Sbjct: 361 QMAMISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRTNSFVYSAETVKQMLQ 420
Query: 441 EKKSASARPLNIAAEKDRLRREMDVALSKNDEAEVERIKARLQQLEASRRLQMKDAKAIR 500
EKKSAS RP+N+AAEKDRLR+E+++A SKNDEA VERIK++++QL+ASR + D KA++
Sbjct: 421 EKKSASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKSKIKQLDASRNKKGVDKKALK 480
Query: 501 LAEMNRKNRVENFKNASELRPM-KDLKAGEAGYDPFSRRWTRSRNYY----VSNAGEAIE 560
LAEMN+KNR ENFKNASE++ + LKAGEAGYDPFSRRWTRS NYY GE E
Sbjct: 481 LAEMNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYYNGKNKGKDGEENE 540
Query: 561 AAEAAGNSDNVTPASDSTRTVSGGTADAGMAATAAALEAAAGAGKLVDTNAPVDGGTESN 620
AA AA N G A AG+ AT AALEAAA AGKL+DT AP+ G E N
Sbjct: 541 AAVAAAVETN------------GADAGAGVEATEAALEAAAEAGKLIDTRAPIGQGAEHN 600
Query: 621 SLHNFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYK 680
LHNFEL +SL LQK+GG G Q F+ARKQ EATVG +V ENDG+RH LTLTVSDYK
Sbjct: 601 QLHNFELSLSLTALQKYGGPQGVQKAFMARKQLTEATVGCRVAENDGKRHGLTLTVSDYK 643
BLAST of Lsi07G001960 vs. NCBI nr
Match:
gi|449462844|ref|XP_004149150.1| (PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis sativus])
HSP 1 Score: 1181.4 bits (3055), Expect = 0.0e+00
Identity = 633/660 (95.91%), Postives = 652/660 (98.79%), Query Frame = 1
Query: 21 MADLENLLLEAAGRTNAAGRNRHSHAPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 80
MADLENLLLEAAGRTNAAGRNRHSH PSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS
Sbjct: 1 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
Query: 81 GSQVPLKKRLDPAERDDDVGSQEEGEDEDVGSEREGDTSDESDVGDDLYKDDDDRRKLAG 140
GSQVPLKKRLDP ERDDD GSQEEGEDEDVGSEREGD+SDESDVGDDLYKDDDDRRKLAG
Sbjct: 61 GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
Query: 141 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKTAPSRKETPPLPSSRIRSSARSADRA 200
MSELQREMILSDRASKKNDKHLYESLRAKMDKGK+APSRKETPPLPSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180
Query: 201 AAKDDALNELRAKRLKQQDPEAHRKLRDSSRGNANNRRFSPTKRKPFTAPSLSSSSQSES 260
AAKDDALNELRAKRLKQQDPEAHRKLRD+SRGNAN+RRFSPTKRKPFTAPSLSSSSQSES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240
Query: 261 ESRFQSEDEGSTGDGGMIDSDDERSMPGSDGPTFENIKEITIRRSKLAKWLMEPFFEDLI 320
ESRFQS+DEGSTGDGGMIDSDDERS+PGSDGPTFE+IKE+TIRRSKLAKWLMEPFFE+LI
Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300
Query: 321 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 380
VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNE+SAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360
Query: 381 MAMVSDSAPLEEEYKQWVKEVERTGGRMLSKQDILDKKEAIQKVNNFVYSAATVKQMLQE 440
MAMVSDSAPLE+EYKQWVKEVERTGGRMLSKQDIL+KKEAIQKVNNFVYSAATVKQMLQ+
Sbjct: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420
Query: 441 KKSASARPLNIAAEKDRLRREMDVALSKNDEAEVERIKARLQQLEASRRLQMKDAKAIRL 500
KKSASARPLNIAAEKDRLRREMDVA+SKNDEAEVERIK RLQQLEASRRLQMKDAKAIRL
Sbjct: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480
Query: 501 AEMNRKNRVENFKNASELRPMKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEAIEAAEAAG 560
AEMNRKNRVENFKNASELRP+KDLKAGEAGYDPFSRRWTRSRNYYVSNAGEA AAEAAG
Sbjct: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540
Query: 561 NSDNVTPASDSTRTVSGGTADAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 620
NSDNVTPA ++TRT +GGT+DAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE
Sbjct: 541 NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600
Query: 621 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 680
LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660
BLAST of Lsi07G001960 vs. NCBI nr
Match:
gi|659107572|ref|XP_008453742.1| (PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis melo])
HSP 1 Score: 1171.0 bits (3028), Expect = 0.0e+00
Identity = 628/660 (95.15%), Postives = 646/660 (97.88%), Query Frame = 1
Query: 21 MADLENLLLEAAGRTNAAGRNRHSHAPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 80
MADLENLLLEAAGRTNA G NRHSH PSRRQREGSYSD GSDSRDDDSDD+RGYASRKPS
Sbjct: 1 MADLENLLLEAAGRTNAGGGNRHSHPPSRRQREGSYSDGGSDSRDDDSDDERGYASRKPS 60
Query: 81 GSQVPLKKRLDPAERDDDVGSQEEGEDEDVGSEREGDTSDESDVGDDLYKDDDDRRKLAG 140
GSQVPLKKRLDP ERDDD GS EEGEDEDVGSE EGD+SDESDVGDDLYKDDDDRRKLAG
Sbjct: 61 GSQVPLKKRLDPTERDDDGGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 120
Query: 141 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKTAPSRKETPPLPSSRIRSSARSADRA 200
MSELQREMILSDRASKKNDKHLYESLRAKMDKGKTAPSRKETPPLPSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKTAPSRKETPPLPSSRIRSSARSADRA 180
Query: 201 AAKDDALNELRAKRLKQQDPEAHRKLRDSSRGNANNRRFSPTKRKPFTAPSLSSSSQSES 260
AAKDDALNELRAKRLKQQDPEAHRKLRD+SRGN+NNRRFSPTKRKPFTAPSLSSSSQSES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNSNNRRFSPTKRKPFTAPSLSSSSQSES 240
Query: 261 ESRFQSEDEGSTGDGGMIDSDDERSMPGSDGPTFENIKEITIRRSKLAKWLMEPFFEDLI 320
ESRFQS+DEGSTGDGGMIDSDDERSMPGSDGPTFE+IKEITIRRSKLAKWLMEPFFE+LI
Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERSMPGSDGPTFEDIKEITIRRSKLAKWLMEPFFEELI 300
Query: 321 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 380
VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNE+SAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNENSAARWQ 360
Query: 381 MAMVSDSAPLEEEYKQWVKEVERTGGRMLSKQDILDKKEAIQKVNNFVYSAATVKQMLQE 440
MAMVSDSAPLE+EYKQWVKEVERTGGRMLSKQD+L+KK+AIQKVNNFVYSAATVKQMLQ+
Sbjct: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDVLEKKDAIQKVNNFVYSAATVKQMLQD 420
Query: 441 KKSASARPLNIAAEKDRLRREMDVALSKNDEAEVERIKARLQQLEASRRLQMKDAKAIRL 500
KKSASARPLNIAAEKDRLRREMDVA+SKNDEAEVERIK RLQQLEASRRLQMKDAKAIRL
Sbjct: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKGRLQQLEASRRLQMKDAKAIRL 480
Query: 501 AEMNRKNRVENFKNASELRPMKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEAIEAAEAAG 560
AEMNRKNRVENFKNASELRP+KDLKAGEAGYDPFSRRWTRSRNYYVSNAGEA AAEAAG
Sbjct: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540
Query: 561 NSDNVTPASDSTRTVSGGTADAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 620
NSD VTPA +STRT +GGT+DAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE
Sbjct: 541 NSDTVTPALESTRTGAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600
Query: 621 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 680
LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660
BLAST of Lsi07G001960 vs. NCBI nr
Match:
gi|703114113|ref|XP_010100559.1| (RNA polymerase-associated protein RTF1-like protein [Morus notabilis])
HSP 1 Score: 938.3 bits (2424), Expect = 7.3e-270
Identity = 526/663 (79.34%), Postives = 581/663 (87.63%), Query Frame = 1
Query: 21 MADLENLLLEAAGRTNAAGRNRHSHAPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 80
MA+LENLLLEAAGRT +AGRNRHS PSRR+REGSYSD GSDSRDDDSDDDRGYA+RKPS
Sbjct: 1 MAELENLLLEAAGRTRSAGRNRHSIPPSRRRREGSYSDGGSDSRDDDSDDDRGYANRKPS 60
Query: 81 GSQVPLKKRLDPAERDDDVGSQEEGEDEDVGSEREGDTSDESDVGDDLYKDDDDRRKLAG 140
GSQVPLKKRLDP E DDD GS+EEG+D D GS+REGD+ ESDVG DLYKDDDDRRKLA
Sbjct: 61 GSQVPLKKRLDPTEMDDDQGSEEEGDD-DRGSDREGDS--ESDVGSDLYKDDDDRRKLAE 120
Query: 141 MSELQREMILSDRASKKNDKHLYESLRAKMD-KGKTAPSRKETPPLPSSRIRSSARSADR 200
M+ELQREMIL DRASKK DK+L E LR K D KGK SRKET PLPSSR+RSSARSADR
Sbjct: 121 MTELQREMILLDRASKKEDKNLKEKLRPKWDNKGKATQSRKET-PLPSSRVRSSARSADR 180
Query: 201 AAAKDDALNELRAKRLKQQDPEAHRKLRDSSRGNANNRRFSPTKRKPFTAPSLSSSSQSE 260
AAAKDDALNELRAKRLKQQDPEAH KLRD+SRG + +R KRK +TA SLSSSSQS+
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHGKLRDASRGGSGSRNLLHNKRKSYTATSLSSSSQSD 240
Query: 261 SESRFQSEDEGSTGDGGMIDSDDERSMPGSDGPTFENIKEITIRRSKLAKWLMEPFFEDL 320
SES QSEDEGSTGDGGMIDSDDER +PGS+G TF++IKE+T+RRSKLAKWLMEPFFE+L
Sbjct: 241 SESESQSEDEGSTGDGGMIDSDDERGIPGSEGLTFDDIKEVTVRRSKLAKWLMEPFFEEL 300
Query: 321 IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARW 380
IVGCFVRVGIGRS+SGPIYRLC+VRNVDA+EPDRQYKL+NKITHKYLNV+WGNE+SAARW
Sbjct: 301 IVGCFVRVGIGRSKSGPIYRLCMVRNVDASEPDRQYKLDNKITHKYLNVVWGNENSAARW 360
Query: 381 QMAMVSDSAPLEEEYKQWVKEVERTGGRMLSKQDILDKKEAIQKVNNFVYSAATVKQMLQ 440
QMAMVSDS P EEE+KQWV+EVER+GGRM +K DILDKKE+I+K+N FVYSAATVKQMLQ
Sbjct: 361 QMAMVSDSVPNEEEFKQWVREVERSGGRMPTKHDILDKKESIKKINTFVYSAATVKQMLQ 420
Query: 441 EKKSASARPLNIAAEKDRLRREMDVALSKNDEAEVERIKARLQQLEASRRLQMKDAKAIR 500
EKKSASARPLNIA EKDRLRRE++VA SKNDE EV+RIK RLQ+LEASR+ + DAKAIR
Sbjct: 421 EKKSASARPLNIALEKDRLRRELEVAQSKNDEVEVDRIKTRLQELEASRKAKQTDAKAIR 480
Query: 501 LAEMNRKNRVENFKNASELRPMK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEAIEAAEA 560
LAEMNRKNRVENFKNASEL+P+ LKAGEAGYDPFSRRWTRSRNYYV GE E + A
Sbjct: 481 LAEMNRKNRVENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVGKPGEVKEDSGA 540
Query: 561 -AGNSDNVTPASDSTRTVSGGTADAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLH 620
AGN+ T A ++ R A+AG+AAT AALEAAA AGKLVDTNAPVD GT SN LH
Sbjct: 541 NAGNNGASTDAENNGRH-GIVAAEAGIAATEAALEAAADAGKLVDTNAPVDQGTVSNMLH 600
Query: 621 NFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRR 680
NFELPISL++LQKFGG GAQAGF+ARKQRIEATVG +VPENDGRRHALTL+V DYKRRR
Sbjct: 601 NFELPISLSVLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLSVGDYKRRR 658
BLAST of Lsi07G001960 vs. NCBI nr
Match:
gi|1009181163|ref|XP_015872019.1| (PREDICTED: protein RTF1 homolog, partial [Ziziphus jujuba])
HSP 1 Score: 935.3 bits (2416), Expect = 6.2e-269
Identity = 516/644 (80.12%), Postives = 567/644 (88.04%), Query Frame = 1
Query: 38 AGRNRHSHAPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPAERDD 97
AGRNRHS PSRR+ EGS SD GSDSRDDDSDDDRGYA RKPSGSQVPLKKRLDPAERDD
Sbjct: 1 AGRNRHSVQPSRRRHEGSSSDGGSDSRDDDSDDDRGYAGRKPSGSQVPLKKRLDPAERDD 60
Query: 98 DVGSQEEGEDEDVGSEREGDTSDESDVGDDLYKDDDDRRKLAGMSELQREMILSDRASKK 157
D GS+EEG+D D GS++EGD SDESDVG DLYKD+DDRRKLA M+EL REMIL DRA+KK
Sbjct: 61 DQGSEEEGDD-DRGSDQEGD-SDESDVGSDLYKDEDDRRKLAEMTELDREMILLDRATKK 120
Query: 158 NDKHLYESLRAKMDKGKTAPSRKETPPLPSSRIRSSARSADRAAAKDDALNELRAKRLKQ 217
D++L E LR K +KGKT SRKETPPLPSSR+RSSARSADRAAAKDDALNELRAKRLKQ
Sbjct: 121 EDRNLKEKLRPKWEKGKTTQSRKETPPLPSSRVRSSARSADRAAAKDDALNELRAKRLKQ 180
Query: 218 QDPEAHRKLRDSSRGNANNRRFSPTKRKPFTAPSLSSSSQSESESRFQSEDEGSTGDGGM 277
QDPEAHRKLRD+SRG++ +R FS T RK FTA SLSSSSQSESES SEDEGSTGDGGM
Sbjct: 181 QDPEAHRKLRDASRGSSGSRSFSHTNRKSFTAASLSSSSQSESESGSGSEDEGSTGDGGM 240
Query: 278 IDSDDERSMPGSDGPTFENIKEITIRRSKLAKWLMEPFFEDLIVGCFVRVGIGRSRSGPI 337
IDSDDER MPGS+GPTF++I+EITIRRSKLAKW+MEPFFE+LIVGCFVRVGIGRS+SGPI
Sbjct: 241 IDSDDERGMPGSEGPTFDDIREITIRRSKLAKWIMEPFFEELIVGCFVRVGIGRSKSGPI 300
Query: 338 YRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQMAMVSDSAPLEEEYKQW 397
YRLC+VRNVDAT+PDRQY+LENK T+KYLNV+WGNE+SAARWQMAMVSDSAP+EEE+KQW
Sbjct: 301 YRLCMVRNVDATDPDRQYRLENKTTYKYLNVVWGNENSAARWQMAMVSDSAPIEEEFKQW 360
Query: 398 VKEVERTGGRMLSKQDILDKKEAIQKVNNFVYSAATVKQMLQEKKSASARPLNIAAEKDR 457
V+EVER+GGRM SKQD+L+KKEAI+K+N+FVYSAATVKQMLQEKKSAS+RP NIA EKDR
Sbjct: 361 VREVERSGGRMPSKQDVLEKKEAIKKINSFVYSAATVKQMLQEKKSASSRPFNIALEKDR 420
Query: 458 LRREMDVALSKNDEAEVERIKARLQQLEASRRLQMKDAKAIRLAEMNRKNRVENFKNASE 517
LRRE++VA SK+DE EVERIK RLQ+LEASR+ DAKAIRLAEMNRKNR ENFKNASE
Sbjct: 421 LRRELEVAQSKHDEMEVERIKTRLQELEASRKAHENDAKAIRLAEMNRKNRAENFKNASE 480
Query: 518 LRPMK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEAIEAAEAAGNSDNVTPASDSTRTVS 577
L+P+ LKAGEAGYDPFSRRWTRSRNYYVS GE E+ EA +N S S
Sbjct: 481 LKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPGETKESVEANAAENN----GASAEVAS 540
Query: 578 GGTADAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFELPISLAMLQKFGGALG 637
GTA AGM AT AALEAAA AGKLVDT+APVD GTESN LHNFELPISL LQKFGG G
Sbjct: 541 NGTALAGMVATVAALEAAADAGKLVDTSAPVDQGTESNLLHNFELPISLTTLQKFGGPQG 600
Query: 638 AQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 681
AQAGF+ARKQRIEATVG +VPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 AQAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 638
BLAST of Lsi07G001960 vs. NCBI nr
Match:
gi|802784101|ref|XP_012091565.1| (PREDICTED: RNA polymerase-associated protein RTF1 homolog [Jatropha curcas])
HSP 1 Score: 933.3 bits (2411), Expect = 2.4e-268
Identity = 517/662 (78.10%), Postives = 583/662 (88.07%), Query Frame = 1
Query: 21 MADLENLLLEAAGRTNAAGRNRHSHAPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 80
MADLENLLLEAAGRT ++GRNR++H PSRR+REGSYSD GSDSRD+DSDDDRGYASRKPS
Sbjct: 1 MADLENLLLEAAGRTGSSGRNRNAHPPSRRRREGSYSDGGSDSRDEDSDDDRGYASRKPS 60
Query: 81 GSQVPLKKRLDPAERDDDVGSQEEGEDEDVGSEREGDTSDESDVGDDLYKDDDDRRKLAG 140
GSQVPLKKRLDPAERDDD GSQEEG +D S+REGD+SDESDVGDDLYKD+DDRRKLA
Sbjct: 61 GSQVPLKKRLDPAERDDDQGSQEEGGYDDGASDREGDSSDESDVGDDLYKDEDDRRKLAQ 120
Query: 141 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKTAPSRKETPPLPSSR-IRSSARSADR 200
MSEL+REMILS+RA KK DK+L E +R+K D + SRKETPPLPSSR +R+SARSADR
Sbjct: 121 MSELEREMILSERADKKGDKNLTERIRSKRDSERATRSRKETPPLPSSRGVRTSARSADR 180
Query: 201 AAAKDDALNELRAKRLKQQDPEAHRKLRDSSRGNANNRRFSPTKRKPFTAPSLSSSSQSE 260
AAAKDDALNELRAKRLKQQDPEAHRKLRD SRG + +R SP +RK FT+ SLSSSS SE
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDVSRGTSGSRGVSPVRRKRFTSASLSSSS-SE 240
Query: 261 SESRFQSEDEGSTGDGGMIDSDDERSMPGSDGPTFENIKEITIRRSKLAKWLMEPFFEDL 320
S+SR SEDE STGDGGM DSD++R PGS+G T+++I+E+TIRRSKLAKWLMEP+FE+L
Sbjct: 241 SDSRSHSEDEASTGDGGMADSDEDRE-PGSEGLTYDDIREVTIRRSKLAKWLMEPWFEEL 300
Query: 321 IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARW 380
IVGCFVRVGIGRS+SGPIYRLCLVRNVDA +PDR YKLENK T+KYLNVIWGNESSAARW
Sbjct: 301 IVGCFVRVGIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAARW 360
Query: 381 QMAMVSDSAPLEEEYKQWVKEVERTGGRMLSKQDILDKKEAIQKVNNFVYSAATVKQMLQ 440
QMAMVSDSAP E+EYKQWV+EVER+GGRM +KQDIL+KKEAI+K N FVYSAATVKQMLQ
Sbjct: 361 QMAMVSDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIKKSNTFVYSAATVKQMLQ 420
Query: 441 EKKSASARPLNIAAEKDRLRREMDVALSKNDEAEVERIKARLQQLEASRRLQMKDAKAIR 500
EKKSAS RPLN+AAEKDRLRRE++VA K D+AEVERI+AR+Q+LEASR+ Q KDAKAIR
Sbjct: 421 EKKSASTRPLNVAAEKDRLRRELEVAQMKQDDAEVERIRARIQELEASRQAQEKDAKAIR 480
Query: 501 LAEMNRKNRVENFKNASELRPMK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEAIEAAEA 560
LAEMNRKNR ENF+NASEL+P+ LKAGEAGYDPFSRRWTRSRNYYVS G A AAEA
Sbjct: 481 LAEMNRKNRAENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPGGADVAAEA 540
Query: 561 AGNSDNVTPASDSTRTVSGGTADAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHN 620
N++ + S +G A+AGMAATAAALEAAA AGKLVDT APVD GTESN+LH+
Sbjct: 541 --NNNGTAAVAHSNGAATGTLAEAGMAATAAALEAAADAGKLVDTAAPVDQGTESNTLHD 600
Query: 621 FELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRG 680
F+LPISL L+KFGGA GA+AGF+ARKQ+IEATVG +VPENDGRRHALTLTVSDYKRRRG
Sbjct: 601 FDLPISLTALEKFGGAKGAKAGFMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRRG 658
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| VIP5_ARATH | 4.6e-232 | 69.22 | Protein RTF1 homolog OS=Arabidopsis thaliana GN=VIP5 PE=1 SV=1 | [more] |
| RTF1_HUMAN | 2.1e-19 | 25.15 | RNA polymerase-associated protein RTF1 homolog OS=Homo sapiens GN=RTF1 PE=1 SV=4 | [more] |
| RTF1_MOUSE | 1.4e-18 | 24.85 | RNA polymerase-associated protein RTF1 homolog OS=Mus musculus GN=Rtf1 PE=1 SV=1 | [more] |
| RTF1_PONAB | 2.9e-16 | 25.12 | RNA polymerase-associated protein RTF1 homolog (Fragment) OS=Pongo abelii GN=RTF... | [more] |
| RTF1_CAEEL | 1.0e-13 | 24.87 | RNA polymerase-associated protein RTF1 homolog OS=Caenorhabditis elegans GN=rtfo... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KXW1_CUCSA | 0.0e+00 | 95.91 | Uncharacterized protein OS=Cucumis sativus GN=Csa_4G038650 PE=4 SV=1 | [more] |
| W9RDA9_9ROSA | 5.1e-270 | 79.34 | RNA polymerase-associated protein RTF1-like protein OS=Morus notabilis GN=L484_0... | [more] |
| A0A067JDU6_JATCU | 1.6e-268 | 78.10 | Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21409 PE=4 SV=1 | [more] |
| A0A061GFX4_THECC | 5.3e-267 | 76.89 | PAF1 complex component isoform 1 OS=Theobroma cacao GN=TCM_029914 PE=4 SV=1 | [more] |
| B9RZ59_RICCO | 2.2e-265 | 76.89 | RNA polymerase-associated protein RTF1, putative OS=Ricinus communis GN=RCOM_093... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G61040.1 | 2.6e-233 | 69.22 | plus-3 domain-containing protein | [more] |
