Cucsa.201430 (gene) Cucumber (Gy14) v1

NameCucsa.201430
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionRNA polymerase-associated protein RTF1-like protein
Locationscaffold01374 : 339175 .. 343477 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCTCGTCGCCACAGTTGAACCTTCGAAAGTCCACACTCTTTCTTCTCCAGCTCCACCCTATCTCAGTTGCCGGCTTCACTTTCTTCTTCTTCTTCTCGTTCTTCTGTCGGGTCACTTTTCCTTTCTTCAATTCCCCATTTGAAAATACGGTGAAATTGGGATGTGTTTAATCAACAATCCTGCCAAATCTGACCTATTTTGGGCGGGGTTTTTGTTTTCTGTTTGAGACGATACAGATTTCAAATCAGATTCATTTCATTTGTAGCTCGTTATCTCTTCCTCGCCCAATCAAGCTCTCTCTTTTCCTCTCTCTCTCTCTCTTTCTCTCTAGGGCTTTCAACGGTTTAAGGTCAAGTGCTCTTTCAAGGTAATTACGCATCTCTAATATCTGGGTTTCTGGATTTTCTAACATTAATTCGCTGTATATTACGGTTTAATTGCCTGCCTGTCTCTATGATTTTATTGTACTTTCATTTGGTCGCTCATGACTGTCGTATCGCTTTCGATTTCTGCCTTGAGGTGTTATTGATTTCCGTTTAGAAATTGTTTTTTTTCTCCCCTTGAAGCTTGGATGTTAGTCACGTAGATTTTATAGCTCTTAATATTGGATATTTTATACTTTATTTCTGAATTTAATTTGCGGCATGCCTTAAGTTCCTAGATTTGTACGAAAACGGGTCTTGATCTCCTGTACTGTGCTGTAATTTTAAAAATGTTGATAACGTTCTTGTTTGGTACTGTGTTTTTTATTGTATACCTTGTGCAGGTAGGGGCTGTGCCGATGTTTACATCGTTGTCATTGATGAAGTTTTGAGATTTGTAATGTAGGAGACATTAATTTATAAATCTTAAACTTGGCAAAAATTAGCTTCCAGAGCGATGATTTTACAGGTTCACGTCCAACATATCTTATAAACGCCTGATCTGACTTAACCTAACTGGATCAAGTTTGTTGGGGCCTGGGGGTAATTTGGAGGTTTTATAACCCACCCTTACGCTAGTTTGATGAGATCATCTCATATTTGCTTTTACTTTTTTTTCTTCGGACACACTGCTGTCAAATGGCTTTTGTCTTTCTTTTACTAGGATCAACAAAAAAAATCAGACATAAAGGGATCGATAAAGATTGATCTGCTTAGGTTTCTGGGCTTTGTGACATTTCAATTTTTGGGTGCAATGCCCTACTCATACAAAGAATAATTGATTGGAGGAATGAATCCAAGGCAATGATACCATTTTACCTGTGTGAGTTTGGGGGCCCAGTAGTGGACAACGCTGCTGTCTTTTGACCTCTTTTGGATTATGATGACTGAAGTTCTAATGGCTGTTTAGGAGTTTTGACAATATATAATATCGTGTTCATCCTTGAGAATGAGGTGATACCTGAATCATTGGGTACGTGTAATGTTTGACATCAAAAGTAGTCATATAAGTTGGTTTAAGTAATACAAAGTTATGGAGGTAGCTATTGTCAGTAAGTAGAGTGCAAACTATGAGTACAAGAGAGGAGTTTGTTTTGTTAGCCTTCGGCAGGAGGTTATGTATACAAATATGGTAAGGTCATGAGTAATTTGGGAGATTTTGAGATTAGTTTATGGCAGAGAGATAGCCTACTAAATTTTTAGTACCCACGCTCTAATTCACCCCAACCATTGTGTTCTATCATAATTGATTGACTATTTATTAGAGACTATTCATTGATTTATGGCTTGAGTAATCTTGAGGAGGGGAATATTTCTCATAACTTCTGATGAAGTTCTACTGCCAATCTTAACGAGCTGTTCAGTTTCCAGTTTTAAATTGTAGTTTCTCGGTAGTCGGTTTTATTATCTTTATTTTATTTTTTCTGGTGATGTATATTATGTGTTTCATTTGAATGGAGATGTGAAAATCTTATGTTTCCTTGGAACATCTTGATTCATTGTCTGATTTGCAAGATGCTGACTATAGTTTTACTATTTTTTCAGGACAGAAGGGCAAGTCAAAGAAGTTAACAGATTTTGGTGTTTGAGGCTGTAAAACATGGCAGATTTAGAAAATTTACTTCTTGAAGCTGCTGGAAGAACTAATGCAGCAGGGAGAAATAGACACTCTCATCCACCATCGCGAAGGCAACGTGAAGGTTCATATTCTGATGCTGGAAGTGACTCTAGGGATGATGACTCAGATGATGATCGTGGTTATGCAAGCAGGAAGCCCTCTGGATCTCAGGTTCCTCTGAAGAAAAGGTTAGATCCTACTGAAAGGGATGATGATGGAGGCAGCCAAGAAGAAGGGGAAGACGAAGATGTTGGTTCAGAACGTGAGGGTGACAGCAGTGATGAATCTGATGTTGGGGATGATCTTTACAAAGATGACGATGATAGGCGCAAGCTTGCTGGTATGTCTGAACTTCAAAGAGAGATGATTCTGTCAGACAGAGCATCTAAGAAGAACGATAAGCATTTATATGAAAGTTTGAGAGCTAAAATGGATAAAGGGAAGAGTGCCCCATCTCGGAAAGAGACTCCACCTCTCCCATCATCTCGTATTAGATCGTCGGCCAGATCTGCTGATAGAGCAGCTGCAAAAGATGATGCCTTAAATGAATTGCGTGCAAAAAGGTTGAAGCAGCAGGACCCAGAGGCTCATCGCAAGCTGAGAGATGCATCTAGAGGAAATGCAAATAGTCGACGGTTCTCACCAACAAAACGAAAGCCCTTCACTGCTCCTAGTTTGAGTAGCTCAAGCCAAAGTGAAAGTGAAAGTAGGTTTCAAAGTGATGATGAAGGATCTACAGGAGATGGTGGAATGATTGACAGTGATGATGAGAGATCCATACCTGGGTCAGATGGGCCAACATTTGAAGATATCAAGGAAGTTACTATTCGTAGATCAAAGCTTGCAAAATGGTTAATGGAGCCATTCTTTGAGGAGTTGATAGTTGGATGCTTTGTGAGAGTTGGAATTGGGAGATCAAGATCTGGGCCTATCTATAGGCTCTGCTTGGTGCGCAATGTTGATGCAACAGAACCTGACCGTCAGTATAAACTAGAGAACAAAATCACACATAAATATCTTAATGTTATTTGGGGAAATGAAGCTTCTGCCGCCAGGTGGCAGATGGCCATGGTTTCAGACTCTGCTCCACTCGAGGATGAATATAAACAGTGGGTTAAAGAGGTAGAGCGAACTGGCGGTCGGATGCTGAGCAAGCAGGATATATTGGAAAAGAAGGAAGCTATACAGAAAGTCAACAACTTTGTCTACTCAGCAGCCACAGTGAAGCAGATGTTGCAGGATAAAAAATCTGCCTCAGCAAGACCGTTAAATATTGCAGCTGAGAAGGACCGGTTGAGGAGAGAGATGGACGTAGCAGTAAGCAAGAACGATGAAGCTGAGGTGGAAAGGATCAAAACAAGGCTGCAGCAACTAGAGGCATCCAGGAGGTTGCAGATGAAAGATGCCAAAGCTATTCGGTTAGCTGAGATGAACAGGAAGAATAGGGTGGAAAACTTCAAAAATGCATCAGAACTAAGACCTCTGAAAGATTTGAAAGCTGGAGAGGCTGGTTACGATCCTTTCTCAAGGAGATGGACCAGGTCAAGGAATTATTATGTTTCCAATGCTGGTGAAGCCAATGGAGCTGCTGAAGCAGCTGGAAACAGTGACAATGTAACACCTGCATTGGAGAATACTAGAACTGAAGCTGGTGGTACTTCAGATGCTGGAATGGCAGCTACCGCAGCGGCCTTGGAAGCTGCTGCTGGTGCTGGAAAGTTGGTTGATACTAATGCTCCTGTAGATGGAGGGACGGAGTCAAACTCGCTGCACAACTTCGAGCTGCCTATATCGTTGGCTATGCTTCAGAAATTTGGTGGTGCCCTCGGAGCGCAGGCTGGGTTCTTAGCAAGGAAACAAAGGATAGAAGCCACAGTTGGACGTCAAGTCCCTGAGAATGATGGTAGGCGGCATGCACTGACACTTACTGTTAGCGACTACAAGAGAAGAAGAGGGCTTCTTTGAGATTCAATACTCAGATCTTCCCTTTGGAGGATTTGGCATATGAATGTAATTCAGCCGGGAAAGTAACTGCTATAAACGCTTCCTTAATTTTAGCTTTAGCAAAATGCTGCTTGATTCTGGGAAAGATTGAGCCCAGAAGTCTGATTAGTTTTGCCTGTTGGTACGAGTTTGCTTTTCGTGTAGATGAAATCAGTACATGTTTAAAGATTCCCATGTGAAGATTATCTCCAGTTCTGTAGTGGTAAACACTCCTCTGTTACTTATTTTTGGGTAGTTTAATACACGATTTTAAGAATA

mRNA sequence

CCCTCGTCGCCACAGTTGAACCTTCGAAAGTCCACACTCTTTCTTCTCCAGCTCCACCCTATCTCAGTTGCCGGCTTCACTTTCTTCTTCTTCTTCTCGTTCTTCTGTCGGGTCACTTTTCCTTTCTTCAATTCCCCATTTGAAAATACGGTGAAATTGGGATGTGTTTAATCAACAATCCTGCCAAATCTGACCTATTTTGGGCGGGGTTTTTGTTTTCTGTTTGAGACGATACAGATTTCAAATCAGATTCATTTCATTTGTAGCTCGTTATCTCTTCCTCGCCCAATCAAGctctctcttttcctctctctctctctctttctctctAGGGCTTTCAACGGTTTAAGGTCAAGTGCTCTTTCAAGGACAGAAGGGCAAGTCAAAGAAGTTAACAGATTTTGGTGTTTGAGGCTGTAAAACATGGCAGATTTAGAAAATTTACTTCTTGAAGCTGCTGGAAGAACTAATGCAGCAGGGAGAAATAGACACTCTCATCCACCATCGCGAAGGCAACGTGAAGGTTCATATTCTGATGCTGGAAGTGACTCTAGGGATGATGACTCAGATGATGATCGTGGTTATGCAAGCAGGAAGCCCTCTGGATCTCAGGTTCCTCTGAAGAAAAGGTTAGATCCTACTGAAAGGGATGATGATGGAGGCAGCCAAGAAGAAGGGGAAGACGAAGATGTTGGTTCAGAACGTGAGGGTGACAGCAGTGATGAATCTGATGTTGGGGATGATCTTTACAAAGATGACGATGATAGGCGCAAGCTTGCTGGTATGTCTGAACTTCAAAGAGAGATGATTCTGTCAGACAGAGCATCTAAGAAGAACGATAAGCATTTATATGAAAGTTTGAGAGCTAAAATGGATAAAGGGAAGAGTGCCCCATCTCGGAAAGAGACTCCACCTCTCCCATCATCTCGTATTAGATCGTCGGCCAGATCTGCTGATAGAGCAGCTGCAAAAGATGATGCCTTAAATGAATTGCGTGCAAAAAGGTTGAAGCAGCAGGACCCAGAGGCTCATCGCAAGCTGAGAGATGCATCTAGAGGAAATGCAAATAGTCGACGGTTCTCACCAACAAAACGAAAGCCCTTCACTGCTCCTAGTTTGAGTAGCTCAAGCCAAAGTGAAAGTGAAAGTAGGTTTCAAAGTGATGATGAAGGATCTACAGGAGATGGTGGAATGATTGACAGTGATGATGAGAGATCCATACCTGGGTCAGATGGGCCAACATTTGAAGATATCAAGGAAGTTACTATTCGTAGATCAAAGCTTGCAAAATGGTTAATGGAGCCATTCTTTGAGGAGTTGATAGTTGGATGCTTTGTGAGAGTTGGAATTGGGAGATCAAGATCTGGGCCTATCTATAGGCTCTGCTTGGTGCGCAATGTTGATGCAACAGAACCTGACCGTCAGTATAAACTAGAGAACAAAATCACACATAAATATCTTAATGTTATTTGGGGAAATGAAGCTTCTGCCGCCAGGTGGCAGATGGCCATGGTTTCAGACTCTGCTCCACTCGAGGATGAATATAAACAGTGGGTTAAAGAGGTAGAGCGAACTGGCGGTCGGATGCTGAGCAAGCAGGATATATTGGAAAAGAAGGAAGCTATACAGAAAGTCAACAACTTTGTCTACTCAGCAGCCACAGTGAAGCAGATGTTGCAGGATAAAAAATCTGCCTCAGCAAGACCGTTAAATATTGCAGCTGAGAAGGACCGGTTGAGGAGAGAGATGGACGTAGCAGTAAGCAAGAACGATGAAGCTGAGGTGGAAAGGATCAAAACAAGGCTGCAGCAACTAGAGGCATCCAGGAGGTTGCAGATGAAAGATGCCAAAGCTATTCGGTTAGCTGAGATGAACAGGAAGAATAGGGTGGAAAACTTCAAAAATGCATCAGAACTAAGACCTCTGAAAGATTTGAAAGCTGGAGAGGCTGGTTACGATCCTTTCTCAAGGAGATGGACCAGGTCAAGGAATTATTATGTTTCCAATGCTGGTGAAGCCAATGGAGCTGCTGAAGCAGCTGGAAACAGTGACAATGTAACACCTGCATTGGAGAATACTAGAACTGAAGCTGGTGGTACTTCAGATGCTGGAATGGCAGCTACCGCAGCGGCCTTGGAAGCTGCTGCTGGTGCTGGAAAGTTGGTTGATACTAATGCTCCTGTAGATGGAGGGACGGAGTCAAACTCGCTGCACAACTTCGAGCTGCCTATATCGTTGGCTATGCTTCAGAAATTTGGTGGTGCCCTCGGAGCGCAGGCTGGGTTCTTAGCAAGGAAACAAAGGATAGAAGCCACAGTTGGACGTCAAGTCCCTGAGAATGATGGTAGGCGGCATGCACTGACACTTACTGTTAGCGACTACAAGAGAAGAAGAGGGCTTCTTTGAGATTCAATACTCAGATCTTCCCTTTGGAGGATTTGGCATATGAATGTAATTCAGCCGGGAAAGTAACTGCTATAAACGCTTCCTTAATTTTAGCTTTAGCAAAATGCTGCTTGATTCTGGGAAAGATTGAGCCCAGAAGTCTGATTAGTTTTGCCTGTTGGTACGAGTTTGCTTTTCGTGTAGATGAAATCAGTACATGTTTAAAGATTCCCATGTGAAGATTATCTCCAGTTCTGTAGTGGTAAACACTCCTCTGTTACTTATTTTTGGGTAGTTTAATACACGATTTTAAGAATA

Coding sequence (CDS)

ATGGCAGATTTAGAAAATTTACTTCTTGAAGCTGCTGGAAGAACTAATGCAGCAGGGAGAAATAGACACTCTCATCCACCATCGCGAAGGCAACGTGAAGGTTCATATTCTGATGCTGGAAGTGACTCTAGGGATGATGACTCAGATGATGATCGTGGTTATGCAAGCAGGAAGCCCTCTGGATCTCAGGTTCCTCTGAAGAAAAGGTTAGATCCTACTGAAAGGGATGATGATGGAGGCAGCCAAGAAGAAGGGGAAGACGAAGATGTTGGTTCAGAACGTGAGGGTGACAGCAGTGATGAATCTGATGTTGGGGATGATCTTTACAAAGATGACGATGATAGGCGCAAGCTTGCTGGTATGTCTGAACTTCAAAGAGAGATGATTCTGTCAGACAGAGCATCTAAGAAGAACGATAAGCATTTATATGAAAGTTTGAGAGCTAAAATGGATAAAGGGAAGAGTGCCCCATCTCGGAAAGAGACTCCACCTCTCCCATCATCTCGTATTAGATCGTCGGCCAGATCTGCTGATAGAGCAGCTGCAAAAGATGATGCCTTAAATGAATTGCGTGCAAAAAGGTTGAAGCAGCAGGACCCAGAGGCTCATCGCAAGCTGAGAGATGCATCTAGAGGAAATGCAAATAGTCGACGGTTCTCACCAACAAAACGAAAGCCCTTCACTGCTCCTAGTTTGAGTAGCTCAAGCCAAAGTGAAAGTGAAAGTAGGTTTCAAAGTGATGATGAAGGATCTACAGGAGATGGTGGAATGATTGACAGTGATGATGAGAGATCCATACCTGGGTCAGATGGGCCAACATTTGAAGATATCAAGGAAGTTACTATTCGTAGATCAAAGCTTGCAAAATGGTTAATGGAGCCATTCTTTGAGGAGTTGATAGTTGGATGCTTTGTGAGAGTTGGAATTGGGAGATCAAGATCTGGGCCTATCTATAGGCTCTGCTTGGTGCGCAATGTTGATGCAACAGAACCTGACCGTCAGTATAAACTAGAGAACAAAATCACACATAAATATCTTAATGTTATTTGGGGAAATGAAGCTTCTGCCGCCAGGTGGCAGATGGCCATGGTTTCAGACTCTGCTCCACTCGAGGATGAATATAAACAGTGGGTTAAAGAGGTAGAGCGAACTGGCGGTCGGATGCTGAGCAAGCAGGATATATTGGAAAAGAAGGAAGCTATACAGAAAGTCAACAACTTTGTCTACTCAGCAGCCACAGTGAAGCAGATGTTGCAGGATAAAAAATCTGCCTCAGCAAGACCGTTAAATATTGCAGCTGAGAAGGACCGGTTGAGGAGAGAGATGGACGTAGCAGTAAGCAAGAACGATGAAGCTGAGGTGGAAAGGATCAAAACAAGGCTGCAGCAACTAGAGGCATCCAGGAGGTTGCAGATGAAAGATGCCAAAGCTATTCGGTTAGCTGAGATGAACAGGAAGAATAGGGTGGAAAACTTCAAAAATGCATCAGAACTAAGACCTCTGAAAGATTTGAAAGCTGGAGAGGCTGGTTACGATCCTTTCTCAAGGAGATGGACCAGGTCAAGGAATTATTATGTTTCCAATGCTGGTGAAGCCAATGGAGCTGCTGAAGCAGCTGGAAACAGTGACAATGTAACACCTGCATTGGAGAATACTAGAACTGAAGCTGGTGGTACTTCAGATGCTGGAATGGCAGCTACCGCAGCGGCCTTGGAAGCTGCTGCTGGTGCTGGAAAGTTGGTTGATACTAATGCTCCTGTAGATGGAGGGACGGAGTCAAACTCGCTGCACAACTTCGAGCTGCCTATATCGTTGGCTATGCTTCAGAAATTTGGTGGTGCCCTCGGAGCGCAGGCTGGGTTCTTAGCAAGGAAACAAAGGATAGAAGCCACAGTTGGACGTCAAGTCCCTGAGAATGATGGTAGGCGGCATGCACTGACACTTACTGTTAGCGACTACAAGAGAAGAAGAGGGCTTCTTTGA

Protein sequence

MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRAAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSESESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELIVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQMAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQDKKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRLAEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAGNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL*
BLAST of Cucsa.201430 vs. Swiss-Prot
Match: VIP5_ARATH (Protein RTF1 homolog OS=Arabidopsis thaliana GN=VIP5 PE=1 SV=1)

HSP 1 Score: 879.0 bits (2270), Expect = 3.2e-254
Identity = 466/663 (70.29%), Postives = 543/663 (81.90%), Query Frame = 1

Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           M DLENLLLEAAGRTN+AGR+RH  PPS R+REGSYSD  SDSRDD SD+DRGYASRKPS
Sbjct: 1   MGDLENLLLEAAGRTNSAGRSRH--PPSSRRREGSYSDGSSDSRDD-SDEDRGYASRKPS 60

Query: 61  GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRL+  ER+D   ++ EG   D  S+REGDSS+ESD GDDLYK+++DR+KLAG
Sbjct: 61  GSQVPLKKRLE-AEREDRA-ARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAG 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSR-IRSSARSADR 180
           M+E QREMILS+RA KK DK+  E LR+K +  K+  S+KET PLP+SR +RSSARSADR
Sbjct: 121 MTEFQREMILSERADKKGDKNFTEKLRSKRESEKTPVSKKETQPLPASRGVRSSARSADR 180

Query: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSE 240
           AAAKDDALNELRAKR+KQQDP A RKLRDAS+G + SR FS TKRKP  + +LSSSSQS+
Sbjct: 181 AAAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSTKRKPLASSNLSSSSQSD 240

Query: 241 SESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEEL 300
           S+SR QSDDEGS  +GGM+DSDD+RS    D PTFED+KEVTIRRSKLAKWLMEPFFEEL
Sbjct: 241 SDSRSQSDDEGS--NGGMLDSDDDRS----DVPTFEDVKEVTIRRSKLAKWLMEPFFEEL 300

Query: 301 IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARW 360
           IVGCFVRVGIGRS+SGPIYRLC V+NVDAT+PD+ YKLENK THKYLNV+WGNE SAARW
Sbjct: 301 IVGCFVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARW 360

Query: 361 QMAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQ 420
           QMAM+SD  PLE+EY+QW++EVERT GRM +KQDI EKKEAIQ+ N+FVYSA TVKQMLQ
Sbjct: 361 QMAMISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRTNSFVYSAETVKQMLQ 420

Query: 421 DKKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIR 480
           +KKSAS RP+N+AAEKDRLR+E+++A SKNDEA VERIK++++QL+ASR  +  D KA++
Sbjct: 421 EKKSASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKSKIKQLDASRNKKGVDKKALK 480

Query: 481 LAEMNRKNRVENFKNASELRPL-KDLKAGEAGYDPFSRRWTRSRNYY-VSNAGEANGAAE 540
           LAEMN+KNR ENFKNASE++ +   LKAGEAGYDPFSRRWTRS NYY   N G+     E
Sbjct: 481 LAEMNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYYNGKNKGKDGEENE 540

Query: 541 AAGNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLH 600
           AA     V  A+E    +AG    AG+ AT AALEAAA AGKL+DT AP+  G E N LH
Sbjct: 541 AA-----VAAAVETNGADAG----AGVEATEAALEAAAEAGKLIDTRAPIGQGAEHNQLH 600

Query: 601 NFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRR 660
           NFEL +SL  LQK+GG  G Q  F+ARKQ  EATVG +V ENDG+RH LTLTVSDYKRRR
Sbjct: 601 NFELSLSLTALQKYGGPQGVQKAFMARKQLTEATVGCRVAENDGKRHGLTLTVSDYKRRR 643

BLAST of Cucsa.201430 vs. Swiss-Prot
Match: RTF1_HUMAN (RNA polymerase-associated protein RTF1 homolog OS=Homo sapiens GN=RTF1 PE=1 SV=4)

HSP 1 Score: 164.5 bits (415), Expect = 4.0e-39
Identity = 167/663 (25.19%), Postives = 283/663 (42.68%), Query Frame = 1

Query: 15  TNAAGRNRHSHPPSRRQREGSYS-DAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPT 74
           T  + +N+      + +++G+    A   +    SD D    S  P   +V         
Sbjct: 105 TFGSNKNKKKGKARKIEKKGTMKKQANKTASSGSSDKDSSAESSAPEEGEVS-------- 164

Query: 75  ERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAGMSELQREMILSDR 134
             D D  S     D D  SE   D       G+DL  D++DR +L  M+E +RE  L +R
Sbjct: 165 --DSDSNSSSSSSDSDSSSE---DEEFHDGYGEDLMGDEEDRARLEQMTEKEREQELFNR 224

Query: 135 ASK----KNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRAAAKDDALNE 194
             K    K    + + L+    K K    +K+       ++     S   +  K     E
Sbjct: 225 IEKREVLKRRFEIKKKLKTAKKKEKKEKKKKQEEEQEKKKLTQIQESQVTSHNK-----E 284

Query: 195 LRAKRLKQQDP--EAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSESESRFQSD 254
            R+KR ++ D   +A  +L+       N       K++P     + S  + E E    S+
Sbjct: 285 RRSKRDEKLDKKSQAMEELKAEREKRKNRTAELLAKKQPLKTSEVYSDDEEEEEDDKSSE 344

Query: 255 DEGSTGDGGMIDSDDERS-IPGSDGPTF--EDIKEVTIRRSKLAKWLMEPFFEELIVGCF 314
               +      D ++E+  IP    P    E++  V + R KL +W   PFF + + GCF
Sbjct: 345 KSDRSSRTSSSDEEEEKEEIPPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCF 404

Query: 315 VRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQMAMV 374
           VR+GIG   S P+YR+  +  V   E  + Y+L    T+K L +  GN+    R  +  V
Sbjct: 405 VRIGIGNHNSKPVYRVAEITGV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFV 464

Query: 375 SDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKE-AIQKVNNFVYSAATVKQMLQDKKS 434
           S+    E E+ +W KE   + G  L   D + KKE +I++  N+ ++   +++++++K+ 
Sbjct: 465 SNQEFTESEFMKW-KEAMFSAGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKER 524

Query: 435 ASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQL----EASRRLQMKDAKAIR 494
               P N A +K +L +E  +A    D+ + ++I+ +L +L    EA  R + K+  AI 
Sbjct: 525 FRKAPPNYAMKKTQLLKEKAMAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI- 584

Query: 495 LAEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAA 554
            + +N++NR  N   + +    +         DPF+RR  + +   VSN+ +   A +AA
Sbjct: 585 -SYINQRNREWNIVESEKALVAESHNMKNQQMDPFTRR--QCKPTIVSNSRDP--AVQAA 644

Query: 555 GNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTN--APVDGGTESNSLH 614
                   A  N +  +G   D       A  E + G GK  D N  +  D   +   +H
Sbjct: 645 ------ILAQLNAKYGSGVLPD-------APKEMSKGQGKDKDLNSKSASDLSEDLFKVH 704

Query: 615 NFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRR 661
           +F++ I L +      AL              A   +  P  DG     +L + DYK+RR
Sbjct: 705 DFDVKIDLQVPSSESKAL--------------AITSKAPPAKDGAPRR-SLNLEDYKKRR 710

BLAST of Cucsa.201430 vs. Swiss-Prot
Match: RTF1_MOUSE (RNA polymerase-associated protein RTF1 homolog OS=Mus musculus GN=Rtf1 PE=1 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 2.6e-38
Identity = 165/663 (24.89%), Postives = 283/663 (42.68%), Query Frame = 1

Query: 15  TNAAGRNRHSHPPSRRQREGSYS-DAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPT 74
           T  + +N+      + +++G+    A   +    SD D    S  P   +V         
Sbjct: 110 TFGSNKNKKKGKTRKVEKKGAMKKQANKAASSGSSDRDSSAESSAPEEGEVS-------- 169

Query: 75  ERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAGMSELQREMILSDR 134
             D +  S     D D  SE   D       G+DL  D++DR +L  M+E +RE  L +R
Sbjct: 170 --DSESSSSSSSSDSDSSSE---DEEFHDGYGEDLMGDEEDRARLEQMTEKEREQELFNR 229

Query: 135 ASK----KNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRAAAKDDALNE 194
             K    K    + + L+    K K    +K+       ++     S   +  K     E
Sbjct: 230 IEKREVLKRRFEIKKKLKTAKKKEKKEKKKKQEEEQEKKKLTQIQESQVTSHNK-----E 289

Query: 195 LRAKRLKQQDP--EAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSESESRFQSD 254
            R+KR ++ D   +A  +L+       N       K++P     + S  + E +    S+
Sbjct: 290 RRSKRDEKLDKKSQAMEELKAEREKRKNRTAELLAKKQPLKTSEVYSDDEEEEDDDKSSE 349

Query: 255 DEGSTGDGGMIDSDDERS-IPGSDGPTF--EDIKEVTIRRSKLAKWLMEPFFEELIVGCF 314
               +      D ++E+  IP    P    E++  V + R KL +W   PFF + + GCF
Sbjct: 350 KSDRSSRTSSSDEEEEKEEIPPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCF 409

Query: 315 VRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQMAMV 374
           VR+GIG   S P+YR+  +  V   E  + Y+L    T+K L +  GN+    R  +  V
Sbjct: 410 VRIGIGNHNSKPVYRVAEITGV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFV 469

Query: 375 SDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKE-AIQKVNNFVYSAATVKQMLQDKKS 434
           S+    E E+ +W KE   + G  L   D + KKE +I++  N+ ++   +++++++K+ 
Sbjct: 470 SNQEFTESEFMKW-KEAMFSAGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKER 529

Query: 435 ASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQL----EASRRLQMKDAKAIR 494
               P N A +K +L +E  +A    D+ + ++I+ +L +L    EA  R + K+  AI 
Sbjct: 530 FRKAPPNYAMKKTQLLKEKAMAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI- 589

Query: 495 LAEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAA 554
            + +N++NR  N   + +    +         DPF+RR  + +   VSN+ +   A +AA
Sbjct: 590 -SYINQRNREWNIVESEKALVAESHNMRNQQMDPFTRR--QCKPTIVSNSRDP--AVQAA 649

Query: 555 GNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPV--DGGTESNSLH 614
                   A  N +  +G   D       A  E + G GK  D N+    D   +   +H
Sbjct: 650 ------ILAQLNAKYGSGVLPD-------APKEMSKGQGKDKDLNSKTASDLSEDLFKVH 709

Query: 615 NFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRR 661
           +F++ I L +      AL              A   +  P  DG     +L + DYK+RR
Sbjct: 710 DFDVKIDLQVPSSESKAL--------------AITSKAPPAKDGAPRR-SLNLEDYKKRR 715

BLAST of Cucsa.201430 vs. Swiss-Prot
Match: RTF1_PONAB (RNA polymerase-associated protein RTF1 homolog (Fragment) OS=Pongo abelii GN=RTF1 PE=2 SV=2)

HSP 1 Score: 153.3 bits (386), Expect = 9.3e-36
Identity = 153/608 (25.16%), Postives = 263/608 (43.26%), Query Frame = 1

Query: 15  TNAAGRNRHSHPPSRRQREGSYS-DAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPT 74
           T  + +N+      + +++G+    A   +    SD D    S  P   +V         
Sbjct: 100 TFGSNKNKKKGKARKIEKKGTMKKQANKTASSGSSDKDSSAESSAPEEGEVS-------- 159

Query: 75  ERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAGMSELQREMILSDR 134
             D D  S     D D  SE   D       G+DL  D++DR +L  M+E +RE  L +R
Sbjct: 160 --DSDSNSSSSSSDSDSSSE---DEEFHDGYGEDLMGDEEDRARLEQMTEKEREQELFNR 219

Query: 135 ASK----KNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRAAAKDDALNE 194
             K    K    + + L+    K K    +K+       ++     S   +  K     E
Sbjct: 220 IEKREVLKRRFEIKKKLKTAKKKEKKEKKKKQEEEQEKKKLTQIQESQVTSHNK-----E 279

Query: 195 LRAKRLKQQDP--EAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSESESRFQSD 254
            R+KR ++ D   +A  +L+       N       K++P     + S  + E E    S+
Sbjct: 280 RRSKRDEKLDKKSQAMEELKAEREKRKNRTVELLAKKQPLKTSEVYSDDEEEEEDDKSSE 339

Query: 255 DEGSTGDGGMIDSDDERS-IPGSDGPTF--EDIKEVTIRRSKLAKWLMEPFFEELIVGCF 314
               +      D ++E+  IP    P    E++  V + R KL +W   PFF + + GCF
Sbjct: 340 KSDRSSRTSSSDEEEEKEEIPPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCF 399

Query: 315 VRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQMAMV 374
           VR+GIG   S P+YR+  +  V   E  + Y+L    T+K L +  GN+    R  +  V
Sbjct: 400 VRIGIGNHNSKPVYRVAEITGV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFV 459

Query: 375 SDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKE-AIQKVNNFVYSAATVKQMLQDKKS 434
           S+    E E+ +W KE   + G  L   D + KKE +I++  N+ ++   +++++++K+ 
Sbjct: 460 SNQEFTESEFMKW-KEAMFSAGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKER 519

Query: 435 ASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQL----EASRRLQMKDAKAIR 494
               P N A +K +L +E  +A    D+ + ++I+ +L +L    EA  R + K+  AI 
Sbjct: 520 FRKAPPNYAMKKTQLLKEKAMAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI- 579

Query: 495 LAEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAA 554
            + +N++NR  N   + +    +         DPF+RR  + +   VSN+ +   A +AA
Sbjct: 580 -SYINQRNREWNIVESEKALVAESHNMKNQQMDPFTRR--QCKPTIVSNSRDP--AVQAA 639

Query: 555 GNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTN--APVDGGTESNSLH 606
                   A  N +  +G   D       A  E + G GK  D N  +  D   +   +H
Sbjct: 640 ------ILAQLNAKYGSGVLPD-------APKEMSKGQGKDKDLNSKSASDLSEDLFKVH 665

BLAST of Cucsa.201430 vs. Swiss-Prot
Match: RTF1_CAEEL (RNA polymerase-associated protein RTF1 homolog OS=Caenorhabditis elegans GN=rtfo-1 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 2.8e-32
Identity = 146/586 (24.91%), Postives = 256/586 (43.69%), Query Frame = 1

Query: 45  DDDSDDDRGYASRKPSGSQVPLKKRLDPTERDDDGGSQE----EGEDEDVGSEREGDSSD 104
           D DSD D G    KP  +        D +  D D    +    + +       R   SSD
Sbjct: 22  DSDSDSDAGPKPGKPLST--------DSSASDSDAEKPQAKPAKKKTLTKRKRRATGSSD 81

Query: 105 ESDVGDDLYKDDDDRRKLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRK 164
           +  V DDL+ D +D+ +   ++EL++E  + +R   + +    E +  ++ K     S K
Sbjct: 82  DDQVDDDLFADKEDKARWKKLTELEKEQEIFERMEARENAIAREEIAQQLAKKAKKSSEK 141

Query: 165 ETPPLPSSRIRSSARSAD--RAAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRR 224
                   ++ S    A   +  A  D+ +E+ A   +  D     K ++A     N R+
Sbjct: 142 GVKTEKRRKMNSGGSDAGSPKRKASSDSDSEMDAAFHRPSDINRKHKEKNAMDALKNKRK 201

Query: 225 FSPTKRKP---------FTAPSLSSSSQSESESRFQSDDEGSTGDGGMIDSDDERSIPGS 284
               K            F A S SSSS S SES   S     +    + + D    I   
Sbjct: 202 EIEKKNAKNEALSIDAVFGANSGSSSSSSSSESSRSSSSSRESSPERVSEKD---KIVKK 261

Query: 285 DGPTFEDIKEVTIRRSKLAKWLMEPFFEELIVGCFVRVGIGR-SRSGPIYRLCLVRNVDA 344
           D     +++   + R KL+  +  PFF+  +VGC+VR+G G+ S SG  YR+  +  V+ 
Sbjct: 262 DVDGLSELRRARLSRHKLSLMIHAPFFDSTVVGCYVRLGQGQMSGSGSKYRIWKIVGVE- 321

Query: 345 TEPDRQYKLENKITHKYLNVIWGNEASAARWQMAMVSDSAPLEDEYKQWVKEVERTGGRM 404
            E ++ Y+LE K T+K +     N  S   ++M  VS++   + E+ +W+   +R G   
Sbjct: 322 -ESNKVYELEGKKTNKIIKC--QNGGSERPFRMQFVSNADFEQIEFDEWLLACKRHGN-- 381

Query: 405 LSKQDILE-KKEAIQKVNNFVYSAATVKQMLQDKKSASARPLNIAAEKDRLRREMDVAVS 464
           L   DI++ KK+ I+K  N  YS   V  M+++K      P N A  K    ++ ++A  
Sbjct: 382 LPTVDIMDKKKQDIEKAINHKYSDKEVDLMIKEKSKYQTVPRNFAMTKANWSKQKELAQQ 441

Query: 465 KNDEAEVERIKTRLQQLE-ASRRLQMKDAKAI-RLAEMNRKNRVENFKNASELRPLKDLK 524
           + D  E E+I+T++ ++E  +  L+ + +K+I  +A +N +NR    K+      LK  +
Sbjct: 442 RGDIREAEQIQTKIDEIERQADELEKERSKSISAIAFINHRNR-SKIKDQVLSGQLKIEE 501

Query: 525 AGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAGNSDNVTPALENTRTEAGGTSDAGMA 584
             +   DPF+R+    R     +    +G   A+ ++ N+              SD G  
Sbjct: 502 NSQD--DPFTRKKGGMR-VVSGSKSRLDGTLSASSSTTNL--------------SDGGKD 561

Query: 585 ATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFELPISLAMLQKF 612
            +++  +           +  +   T+ +SLH+F+L I L  L+ F
Sbjct: 562 KSSSLAKPTQ-----PPPSTQIKKKTDISSLHDFDLDIDLGKLKDF 567

BLAST of Cucsa.201430 vs. TrEMBL
Match: A0A0A0KXW1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G038650 PE=4 SV=1)

HSP 1 Score: 1296.2 bits (3353), Expect = 0.0e+00
Identity = 660/660 (100.00%), Postives = 660/660 (100.00%), Query Frame = 1

Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS
Sbjct: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60

Query: 61  GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG
Sbjct: 61  GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180
           MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180

Query: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240
           AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240

Query: 241 ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300
           ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300

Query: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360
           VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360

Query: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420
           MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD
Sbjct: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420

Query: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480
           KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL
Sbjct: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480

Query: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540
           AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG
Sbjct: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540

Query: 541 NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600
           NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE
Sbjct: 541 NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600

Query: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660
           LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660

BLAST of Cucsa.201430 vs. TrEMBL
Match: W9RDA9_9ROSA (RNA polymerase-associated protein RTF1-like protein OS=Morus notabilis GN=L484_012115 PE=4 SV=1)

HSP 1 Score: 1015.0 bits (2623), Expect = 4.2e-293
Identity = 526/662 (79.46%), Postives = 579/662 (87.46%), Query Frame = 1

Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           MA+LENLLLEAAGRT +AGRNRHS PPSRR+REGSYSD GSDSRDDDSDDDRGYA+RKPS
Sbjct: 1   MAELENLLLEAAGRTRSAGRNRHSIPPSRRRREGSYSDGGSDSRDDDSDDDRGYANRKPS 60

Query: 61  GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDPTE DDD GS+EEG+D D GS+REGDS  ESDVG DLYKDDDDRRKLA 
Sbjct: 61  GSQVPLKKRLDPTEMDDDQGSEEEGDD-DRGSDREGDS--ESDVGSDLYKDDDDRRKLAE 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMD-KGKSAPSRKETPPLPSSRIRSSARSADR 180
           M+ELQREMIL DRASKK DK+L E LR K D KGK+  SRKET PLPSSR+RSSARSADR
Sbjct: 121 MTELQREMILLDRASKKEDKNLKEKLRPKWDNKGKATQSRKET-PLPSSRVRSSARSADR 180

Query: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSE 240
           AAAKDDALNELRAKRLKQQDPEAH KLRDASRG + SR     KRK +TA SLSSSSQS+
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHGKLRDASRGGSGSRNLLHNKRKSYTATSLSSSSQSD 240

Query: 241 SESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEEL 300
           SES  QS+DEGSTGDGGMIDSDDER IPGS+G TF+DIKEVT+RRSKLAKWLMEPFFEEL
Sbjct: 241 SESESQSEDEGSTGDGGMIDSDDERGIPGSEGLTFDDIKEVTVRRSKLAKWLMEPFFEEL 300

Query: 301 IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARW 360
           IVGCFVRVGIGRS+SGPIYRLC+VRNVDA+EPDRQYKL+NKITHKYLNV+WGNE SAARW
Sbjct: 301 IVGCFVRVGIGRSKSGPIYRLCMVRNVDASEPDRQYKLDNKITHKYLNVVWGNENSAARW 360

Query: 361 QMAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQ 420
           QMAMVSDS P E+E+KQWV+EVER+GGRM +K DIL+KKE+I+K+N FVYSAATVKQMLQ
Sbjct: 361 QMAMVSDSVPNEEEFKQWVREVERSGGRMPTKHDILDKKESIKKINTFVYSAATVKQMLQ 420

Query: 421 DKKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIR 480
           +KKSASARPLNIA EKDRLRRE++VA SKNDE EV+RIKTRLQ+LEASR+ +  DAKAIR
Sbjct: 421 EKKSASARPLNIALEKDRLRRELEVAQSKNDEVEVDRIKTRLQELEASRKAKQTDAKAIR 480

Query: 481 LAEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEA 540
           LAEMNRKNRVENFKNASEL+P+   LKAGEAGYDPFSRRWTRSRNYYV   GE    + A
Sbjct: 481 LAEMNRKNRVENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVGKPGEVKEDSGA 540

Query: 541 AGNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHN 600
              ++  +   EN        ++AG+AAT AALEAAA AGKLVDTNAPVD GT SN LHN
Sbjct: 541 NAGNNGASTDAENNGRHGIVAAEAGIAATEAALEAAADAGKLVDTNAPVDQGTVSNMLHN 600

Query: 601 FELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRG 660
           FELPISL++LQKFGG  GAQAGF+ARKQRIEATVG +VPENDGRRHALTL+V DYKRRRG
Sbjct: 601 FELPISLSVLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLSVGDYKRRRG 658

BLAST of Cucsa.201430 vs. TrEMBL
Match: A0A067JDU6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21409 PE=4 SV=1)

HSP 1 Score: 1008.1 bits (2605), Expect = 5.1e-291
Identity = 522/663 (78.73%), Postives = 588/663 (88.69%), Query Frame = 1

Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           MADLENLLLEAAGRT ++GRNR++HPPSRR+REGSYSD GSDSRD+DSDDDRGYASRKPS
Sbjct: 1   MADLENLLLEAAGRTGSSGRNRNAHPPSRRRREGSYSDGGSDSRDEDSDDDRGYASRKPS 60

Query: 61  GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDP ERDDD GSQEEG  +D  S+REGDSSDESDVGDDLYKD+DDRRKLA 
Sbjct: 61  GSQVPLKKRLDPAERDDDQGSQEEGGYDDGASDREGDSSDESDVGDDLYKDEDDRRKLAQ 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSR-IRSSARSADR 180
           MSEL+REMILS+RA KK DK+L E +R+K D  ++  SRKETPPLPSSR +R+SARSADR
Sbjct: 121 MSELEREMILSERADKKGDKNLTERIRSKRDSERATRSRKETPPLPSSRGVRTSARSADR 180

Query: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSE 240
           AAAKDDALNELRAKRLKQQDPEAHRKLRD SRG + SR  SP +RK FT+ SLSSSS SE
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDVSRGTSGSRGVSPVRRKRFTSASLSSSS-SE 240

Query: 241 SESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEEL 300
           S+SR  S+DE STGDGGM DSD++R  PGS+G T++DI+EVTIRRSKLAKWLMEP+FEEL
Sbjct: 241 SDSRSHSEDEASTGDGGMADSDEDRE-PGSEGLTYDDIREVTIRRSKLAKWLMEPWFEEL 300

Query: 301 IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARW 360
           IVGCFVRVGIGRS+SGPIYRLCLVRNVDA +PDR YKLENK T+KYLNVIWGNE+SAARW
Sbjct: 301 IVGCFVRVGIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAARW 360

Query: 361 QMAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQ 420
           QMAMVSDSAP EDEYKQWV+EVER+GGRM +KQDILEKKEAI+K N FVYSAATVKQMLQ
Sbjct: 361 QMAMVSDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIKKSNTFVYSAATVKQMLQ 420

Query: 421 DKKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIR 480
           +KKSAS RPLN+AAEKDRLRRE++VA  K D+AEVERI+ R+Q+LEASR+ Q KDAKAIR
Sbjct: 421 EKKSASTRPLNVAAEKDRLRRELEVAQMKQDDAEVERIRARIQELEASRQAQEKDAKAIR 480

Query: 481 LAEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEA 540
           LAEMNRKNR ENF+NASEL+P+   LKAGEAGYDPFSRRWTRSRNYYVS  G A+ AAEA
Sbjct: 481 LAEMNRKNRAENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPGGADVAAEA 540

Query: 541 AGNSDNVTPALENTRTEAGGT-SDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLH 600
              ++N T A+ ++   A GT ++AGMAATAAALEAAA AGKLVDT APVD GTESN+LH
Sbjct: 541 ---NNNGTAAVAHSNGAATGTLAEAGMAATAAALEAAADAGKLVDTAAPVDQGTESNTLH 600

Query: 601 NFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRR 660
           +F+LPISL  L+KFGGA GA+AGF+ARKQ+IEATVG +VPENDGRRHALTLTVSDYKRRR
Sbjct: 601 DFDLPISLTALEKFGGAKGAKAGFMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRR 658

BLAST of Cucsa.201430 vs. TrEMBL
Match: A0A061GFX4_THECC (PAF1 complex component isoform 1 OS=Theobroma cacao GN=TCM_029914 PE=4 SV=1)

HSP 1 Score: 1003.0 bits (2592), Expect = 1.6e-289
Identity = 509/662 (76.89%), Postives = 574/662 (86.71%), Query Frame = 1

Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           MADLENLLLEAAGRT   GRNRHS PPSRR+REGSYSD GSDSRDDDSDDD GYASRKPS
Sbjct: 1   MADLENLLLEAAGRTGTGGRNRHSLPPSRRRREGSYSDGGSDSRDDDSDDDHGYASRKPS 60

Query: 61  GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDP ERDDD GSQEEG+ +D  S  EGDSSDESDVGDDLYK++DDRRKLA 
Sbjct: 61  GSQVPLKKRLDPAERDDDQGSQEEGDYDDGVSVHEGDSSDESDVGDDLYKNEDDRRKLAQ 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSR-IRSSARSADR 180
           M+EL+RE+ILS+RA K+ DK   E +R+K +  + + SRKETPPLPSSR +RSSARSADR
Sbjct: 121 MTELERELILSERADKRGDKKFTEKIRSKRENDRPSRSRKETPPLPSSRGVRSSARSADR 180

Query: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSE 240
           AAAKDDALNELRAKRLKQQDPEAHRKLRDASRG++ SR  SP KRKPFTA SLSSSSQS+
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGSRGLSPVKRKPFTASSLSSSSQSD 240

Query: 241 SESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEEL 300
           SESR  S+DEGSTGDGGM+DSDD+R + G DGPTF+DIKE+TIRRSKLAKW MEPFFEEL
Sbjct: 241 SESRSNSEDEGSTGDGGMVDSDDDRGMQGPDGPTFDDIKEITIRRSKLAKWFMEPFFEEL 300

Query: 301 IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARW 360
           IVGC+VRVGIGRS+SGPIYRLC+VRNVDATEP+R YKLENK T+KYLNV+WGNE+SAARW
Sbjct: 301 IVGCYVRVGIGRSKSGPIYRLCMVRNVDATEPERTYKLENKTTYKYLNVVWGNESSAARW 360

Query: 361 QMAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQ 420
           QMAM+SDS P E+E++Q ++E+ER+GGRM SKQD+LEKKEA+QK   FVYSAATVKQMLQ
Sbjct: 361 QMAMISDSPPQEEEFRQLIRELERSGGRMPSKQDVLEKKEALQKAKTFVYSAATVKQMLQ 420

Query: 421 DKKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIR 480
           +KKS S+RPLNIAAEKDRLRR++++A SK+DEAEVERIK RLQQLEASR+ Q KDAKA+R
Sbjct: 421 EKKSTSSRPLNIAAEKDRLRRDLEIAQSKHDEAEVERIKMRLQQLEASRQAQEKDAKAVR 480

Query: 481 LAEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEA 540
           LAEMNRKNR ENFKNASEL+P+   LKAGEAGYDPFSRRWTRSRNYYV+    A+ AA A
Sbjct: 481 LAEMNRKNRAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVAKPPGADAAAVA 540

Query: 541 AGNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHN 600
             N D +         +A   ++AG AAT AAL+ AAGAGKLVDT+APVD GTESN LH+
Sbjct: 541 --NGDRIGVIASGNGNDARAAAEAGRAATVAALQEAAGAGKLVDTSAPVDEGTESNMLHD 600

Query: 601 FELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRG 660
           FE+PISL  LQ+FGG  GA AGF+ARKQRIEATVG QVPENDGRRHALTLTVSDYKRRRG
Sbjct: 601 FEIPISLNALQRFGGPQGAVAGFMARKQRIEATVGCQVPENDGRRHALTLTVSDYKRRRG 660

BLAST of Cucsa.201430 vs. TrEMBL
Match: B9RZ59_RICCO (RNA polymerase-associated protein RTF1, putative OS=Ricinus communis GN=RCOM_0935630 PE=4 SV=1)

HSP 1 Score: 1000.0 bits (2584), Expect = 1.4e-288
Identity = 512/662 (77.34%), Postives = 577/662 (87.16%), Query Frame = 1

Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           MADLENLLLEAAGRT  +GRNR++ PPSRR+REGSYSD GSDSRDDDSDDDRGY+SRKPS
Sbjct: 1   MADLENLLLEAAGRTGTSGRNRNALPPSRRRREGSYSDGGSDSRDDDSDDDRGYSSRKPS 60

Query: 61  GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDPTERDDD GSQ+EG+ +D  S+REGDSSD SDVG+DLYK++DDRRKLA 
Sbjct: 61  GSQVPLKKRLDPTERDDDQGSQDEGDYDDGNSDREGDSSDGSDVGEDLYKNEDDRRKLAQ 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSR-IRSSARSADR 180
           MSEL+REMILS+RA KK DK+L E +R+K +  ++  SRKETPPLPSSR +R+SARSADR
Sbjct: 121 MSELEREMILSERADKKGDKNLTERIRSKRESERTTRSRKETPPLPSSRGVRTSARSADR 180

Query: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSE 240
           AAAKDDALNEL+A+RLKQQDPEAHRKLRDASR  + SR FSP KRK FT+ SLSSSS SE
Sbjct: 181 AAAKDDALNELKARRLKQQDPEAHRKLRDASRRGSGSRGFSPIKRKRFTSASLSSSS-SE 240

Query: 241 SESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEEL 300
           SESR  S+DEGSTGDGGM DSDD+   PGS GPTF+DI+E+TIRRSKLAKW MEP+FEEL
Sbjct: 241 SESRSHSEDEGSTGDGGMADSDDDGE-PGSQGPTFDDIREITIRRSKLAKWFMEPWFEEL 300

Query: 301 IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARW 360
           IVGCFVRVGIGRS+SGPIYRLCLVRNVDA +PDR YKLENK T+KYLNVIWGNE+SAARW
Sbjct: 301 IVGCFVRVGIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAARW 360

Query: 361 QMAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQ 420
           QMAM+SDSAP EDEYKQWV+EVER+GGRM +KQDILEKKEAI+K N FVYSAATVKQMLQ
Sbjct: 361 QMAMISDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIRKSNTFVYSAATVKQMLQ 420

Query: 421 DKKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIR 480
           +KKSAS+RPLN+AAEKDRLRRE++VA SK D+AEVERI+ R+Q+LEASR+ Q KDAKAIR
Sbjct: 421 EKKSASSRPLNVAAEKDRLRRELEVAQSKQDDAEVERIRARIQELEASRQTQGKDAKAIR 480

Query: 481 LAEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEA 540
           LAEMNRKNR ENF+NASEL+P+   LKAGEAGYDPFSRRWTRSRNYYVS     + AA  
Sbjct: 481 LAEMNRKNRAENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPAGGDAAAAT 540

Query: 541 AGNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHN 600
              +         T + AG +++AGMAATAAALEAAA AGKLVDT APVD GTESN+LHN
Sbjct: 541 NNEASGTVAVANKTESAAGVSAEAGMAATAAALEAAADAGKLVDTAAPVDQGTESNTLHN 600

Query: 601 FELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRG 660
           FELPISL  LQKFGGA GAQAGF+ARKQRIEAT+G +V END +RH LTLTVSDYKRRRG
Sbjct: 601 FELPISLTALQKFGGAQGAQAGFMARKQRIEATIGCRVSENDEKRHVLTLTVSDYKRRRG 660

BLAST of Cucsa.201430 vs. TAIR10
Match: AT1G61040.1 (AT1G61040.1 plus-3 domain-containing protein)

HSP 1 Score: 879.0 bits (2270), Expect = 1.8e-255
Identity = 466/663 (70.29%), Postives = 543/663 (81.90%), Query Frame = 1

Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           M DLENLLLEAAGRTN+AGR+RH  PPS R+REGSYSD  SDSRDD SD+DRGYASRKPS
Sbjct: 1   MGDLENLLLEAAGRTNSAGRSRH--PPSSRRREGSYSDGSSDSRDD-SDEDRGYASRKPS 60

Query: 61  GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRL+  ER+D   ++ EG   D  S+REGDSS+ESD GDDLYK+++DR+KLAG
Sbjct: 61  GSQVPLKKRLE-AEREDRA-ARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAG 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSR-IRSSARSADR 180
           M+E QREMILS+RA KK DK+  E LR+K +  K+  S+KET PLP+SR +RSSARSADR
Sbjct: 121 MTEFQREMILSERADKKGDKNFTEKLRSKRESEKTPVSKKETQPLPASRGVRSSARSADR 180

Query: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSE 240
           AAAKDDALNELRAKR+KQQDP A RKLRDAS+G + SR FS TKRKP  + +LSSSSQS+
Sbjct: 181 AAAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSTKRKPLASSNLSSSSQSD 240

Query: 241 SESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEEL 300
           S+SR QSDDEGS  +GGM+DSDD+RS    D PTFED+KEVTIRRSKLAKWLMEPFFEEL
Sbjct: 241 SDSRSQSDDEGS--NGGMLDSDDDRS----DVPTFEDVKEVTIRRSKLAKWLMEPFFEEL 300

Query: 301 IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARW 360
           IVGCFVRVGIGRS+SGPIYRLC V+NVDAT+PD+ YKLENK THKYLNV+WGNE SAARW
Sbjct: 301 IVGCFVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARW 360

Query: 361 QMAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQ 420
           QMAM+SD  PLE+EY+QW++EVERT GRM +KQDI EKKEAIQ+ N+FVYSA TVKQMLQ
Sbjct: 361 QMAMISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRTNSFVYSAETVKQMLQ 420

Query: 421 DKKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIR 480
           +KKSAS RP+N+AAEKDRLR+E+++A SKNDEA VERIK++++QL+ASR  +  D KA++
Sbjct: 421 EKKSASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKSKIKQLDASRNKKGVDKKALK 480

Query: 481 LAEMNRKNRVENFKNASELRPL-KDLKAGEAGYDPFSRRWTRSRNYY-VSNAGEANGAAE 540
           LAEMN+KNR ENFKNASE++ +   LKAGEAGYDPFSRRWTRS NYY   N G+     E
Sbjct: 481 LAEMNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYYNGKNKGKDGEENE 540

Query: 541 AAGNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLH 600
           AA     V  A+E    +AG    AG+ AT AALEAAA AGKL+DT AP+  G E N LH
Sbjct: 541 AA-----VAAAVETNGADAG----AGVEATEAALEAAAEAGKLIDTRAPIGQGAEHNQLH 600

Query: 601 NFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRR 660
           NFEL +SL  LQK+GG  G Q  F+ARKQ  EATVG +V ENDG+RH LTLTVSDYKRRR
Sbjct: 601 NFELSLSLTALQKYGGPQGVQKAFMARKQLTEATVGCRVAENDGKRHGLTLTVSDYKRRR 643

BLAST of Cucsa.201430 vs. NCBI nr
Match: gi|449462844|ref|XP_004149150.1| (PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis sativus])

HSP 1 Score: 1296.2 bits (3353), Expect = 0.0e+00
Identity = 660/660 (100.00%), Postives = 660/660 (100.00%), Query Frame = 1

Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS
Sbjct: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60

Query: 61  GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG
Sbjct: 61  GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180
           MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180

Query: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240
           AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240

Query: 241 ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300
           ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300

Query: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360
           VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360

Query: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420
           MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD
Sbjct: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420

Query: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480
           KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL
Sbjct: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480

Query: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540
           AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG
Sbjct: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540

Query: 541 NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600
           NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE
Sbjct: 541 NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600

Query: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660
           LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660

BLAST of Cucsa.201430 vs. NCBI nr
Match: gi|659107572|ref|XP_008453742.1| (PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis melo])

HSP 1 Score: 1266.1 bits (3275), Expect = 0.0e+00
Identity = 642/660 (97.27%), Postives = 651/660 (98.64%), Query Frame = 1

Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           MADLENLLLEAAGRTNA G NRHSHPPSRRQREGSYSD GSDSRDDDSDD+RGYASRKPS
Sbjct: 1   MADLENLLLEAAGRTNAGGGNRHSHPPSRRQREGSYSDGGSDSRDDDSDDERGYASRKPS 60

Query: 61  GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDPTERDDDGGS EEGEDEDVGSE EGDSSDESDVGDDLYKDDDDRRKLAG
Sbjct: 61  GSQVPLKKRLDPTERDDDGGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180
           MSELQREMILSDRASKKNDKHLYESLRAKMDKGK+APSRKETPPLPSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKTAPSRKETPPLPSSRIRSSARSADRA 180

Query: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240
           AAKDDALNELRAKRLKQQDPEAHRKLRDASRGN+N+RRFSPTKRKPFTAPSLSSSSQSES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNSNNRRFSPTKRKPFTAPSLSSSSQSES 240

Query: 241 ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300
           ESRFQSDDEGSTGDGGMIDSDDERS+PGSDGPTFEDIKE+TIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERSMPGSDGPTFEDIKEITIRRSKLAKWLMEPFFEELI 300

Query: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360
           VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNE SAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNENSAARWQ 360

Query: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420
           MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQD+LEKK+AIQKVNNFVYSAATVKQMLQD
Sbjct: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDVLEKKDAIQKVNNFVYSAATVKQMLQD 420

Query: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480
           KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIK RLQQLEASRRLQMKDAKAIRL
Sbjct: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKGRLQQLEASRRLQMKDAKAIRL 480

Query: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540
           AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG
Sbjct: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540

Query: 541 NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600
           NSD VTPALE+TRT AGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE
Sbjct: 541 NSDTVTPALESTRTGAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600

Query: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660
           LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660

BLAST of Cucsa.201430 vs. NCBI nr
Match: gi|703114113|ref|XP_010100559.1| (RNA polymerase-associated protein RTF1-like protein [Morus notabilis])

HSP 1 Score: 1015.0 bits (2623), Expect = 6.0e-293
Identity = 526/662 (79.46%), Postives = 579/662 (87.46%), Query Frame = 1

Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           MA+LENLLLEAAGRT +AGRNRHS PPSRR+REGSYSD GSDSRDDDSDDDRGYA+RKPS
Sbjct: 1   MAELENLLLEAAGRTRSAGRNRHSIPPSRRRREGSYSDGGSDSRDDDSDDDRGYANRKPS 60

Query: 61  GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDPTE DDD GS+EEG+D D GS+REGDS  ESDVG DLYKDDDDRRKLA 
Sbjct: 61  GSQVPLKKRLDPTEMDDDQGSEEEGDD-DRGSDREGDS--ESDVGSDLYKDDDDRRKLAE 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMD-KGKSAPSRKETPPLPSSRIRSSARSADR 180
           M+ELQREMIL DRASKK DK+L E LR K D KGK+  SRKET PLPSSR+RSSARSADR
Sbjct: 121 MTELQREMILLDRASKKEDKNLKEKLRPKWDNKGKATQSRKET-PLPSSRVRSSARSADR 180

Query: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSE 240
           AAAKDDALNELRAKRLKQQDPEAH KLRDASRG + SR     KRK +TA SLSSSSQS+
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHGKLRDASRGGSGSRNLLHNKRKSYTATSLSSSSQSD 240

Query: 241 SESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEEL 300
           SES  QS+DEGSTGDGGMIDSDDER IPGS+G TF+DIKEVT+RRSKLAKWLMEPFFEEL
Sbjct: 241 SESESQSEDEGSTGDGGMIDSDDERGIPGSEGLTFDDIKEVTVRRSKLAKWLMEPFFEEL 300

Query: 301 IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARW 360
           IVGCFVRVGIGRS+SGPIYRLC+VRNVDA+EPDRQYKL+NKITHKYLNV+WGNE SAARW
Sbjct: 301 IVGCFVRVGIGRSKSGPIYRLCMVRNVDASEPDRQYKLDNKITHKYLNVVWGNENSAARW 360

Query: 361 QMAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQ 420
           QMAMVSDS P E+E+KQWV+EVER+GGRM +K DIL+KKE+I+K+N FVYSAATVKQMLQ
Sbjct: 361 QMAMVSDSVPNEEEFKQWVREVERSGGRMPTKHDILDKKESIKKINTFVYSAATVKQMLQ 420

Query: 421 DKKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIR 480
           +KKSASARPLNIA EKDRLRRE++VA SKNDE EV+RIKTRLQ+LEASR+ +  DAKAIR
Sbjct: 421 EKKSASARPLNIALEKDRLRRELEVAQSKNDEVEVDRIKTRLQELEASRKAKQTDAKAIR 480

Query: 481 LAEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEA 540
           LAEMNRKNRVENFKNASEL+P+   LKAGEAGYDPFSRRWTRSRNYYV   GE    + A
Sbjct: 481 LAEMNRKNRVENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVGKPGEVKEDSGA 540

Query: 541 AGNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHN 600
              ++  +   EN        ++AG+AAT AALEAAA AGKLVDTNAPVD GT SN LHN
Sbjct: 541 NAGNNGASTDAENNGRHGIVAAEAGIAATEAALEAAADAGKLVDTNAPVDQGTVSNMLHN 600

Query: 601 FELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRG 660
           FELPISL++LQKFGG  GAQAGF+ARKQRIEATVG +VPENDGRRHALTL+V DYKRRRG
Sbjct: 601 FELPISLSVLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLSVGDYKRRRG 658

BLAST of Cucsa.201430 vs. NCBI nr
Match: gi|802784101|ref|XP_012091565.1| (PREDICTED: RNA polymerase-associated protein RTF1 homolog [Jatropha curcas])

HSP 1 Score: 1008.1 bits (2605), Expect = 7.3e-291
Identity = 522/663 (78.73%), Postives = 588/663 (88.69%), Query Frame = 1

Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           MADLENLLLEAAGRT ++GRNR++HPPSRR+REGSYSD GSDSRD+DSDDDRGYASRKPS
Sbjct: 1   MADLENLLLEAAGRTGSSGRNRNAHPPSRRRREGSYSDGGSDSRDEDSDDDRGYASRKPS 60

Query: 61  GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDP ERDDD GSQEEG  +D  S+REGDSSDESDVGDDLYKD+DDRRKLA 
Sbjct: 61  GSQVPLKKRLDPAERDDDQGSQEEGGYDDGASDREGDSSDESDVGDDLYKDEDDRRKLAQ 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSR-IRSSARSADR 180
           MSEL+REMILS+RA KK DK+L E +R+K D  ++  SRKETPPLPSSR +R+SARSADR
Sbjct: 121 MSELEREMILSERADKKGDKNLTERIRSKRDSERATRSRKETPPLPSSRGVRTSARSADR 180

Query: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSE 240
           AAAKDDALNELRAKRLKQQDPEAHRKLRD SRG + SR  SP +RK FT+ SLSSSS SE
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDVSRGTSGSRGVSPVRRKRFTSASLSSSS-SE 240

Query: 241 SESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEEL 300
           S+SR  S+DE STGDGGM DSD++R  PGS+G T++DI+EVTIRRSKLAKWLMEP+FEEL
Sbjct: 241 SDSRSHSEDEASTGDGGMADSDEDRE-PGSEGLTYDDIREVTIRRSKLAKWLMEPWFEEL 300

Query: 301 IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARW 360
           IVGCFVRVGIGRS+SGPIYRLCLVRNVDA +PDR YKLENK T+KYLNVIWGNE+SAARW
Sbjct: 301 IVGCFVRVGIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAARW 360

Query: 361 QMAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQ 420
           QMAMVSDSAP EDEYKQWV+EVER+GGRM +KQDILEKKEAI+K N FVYSAATVKQMLQ
Sbjct: 361 QMAMVSDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIKKSNTFVYSAATVKQMLQ 420

Query: 421 DKKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIR 480
           +KKSAS RPLN+AAEKDRLRRE++VA  K D+AEVERI+ R+Q+LEASR+ Q KDAKAIR
Sbjct: 421 EKKSASTRPLNVAAEKDRLRRELEVAQMKQDDAEVERIRARIQELEASRQAQEKDAKAIR 480

Query: 481 LAEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEA 540
           LAEMNRKNR ENF+NASEL+P+   LKAGEAGYDPFSRRWTRSRNYYVS  G A+ AAEA
Sbjct: 481 LAEMNRKNRAENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPGGADVAAEA 540

Query: 541 AGNSDNVTPALENTRTEAGGT-SDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLH 600
              ++N T A+ ++   A GT ++AGMAATAAALEAAA AGKLVDT APVD GTESN+LH
Sbjct: 541 ---NNNGTAAVAHSNGAATGTLAEAGMAATAAALEAAADAGKLVDTAAPVDQGTESNTLH 600

Query: 601 NFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRR 660
           +F+LPISL  L+KFGGA GA+AGF+ARKQ+IEATVG +VPENDGRRHALTLTVSDYKRRR
Sbjct: 601 DFDLPISLTALEKFGGAKGAKAGFMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRR 658

BLAST of Cucsa.201430 vs. NCBI nr
Match: gi|590624747|ref|XP_007025691.1| (PAF1 complex component isoform 1 [Theobroma cacao])

HSP 1 Score: 1003.0 bits (2592), Expect = 2.4e-289
Identity = 509/662 (76.89%), Postives = 574/662 (86.71%), Query Frame = 1

Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           MADLENLLLEAAGRT   GRNRHS PPSRR+REGSYSD GSDSRDDDSDDD GYASRKPS
Sbjct: 1   MADLENLLLEAAGRTGTGGRNRHSLPPSRRRREGSYSDGGSDSRDDDSDDDHGYASRKPS 60

Query: 61  GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDP ERDDD GSQEEG+ +D  S  EGDSSDESDVGDDLYK++DDRRKLA 
Sbjct: 61  GSQVPLKKRLDPAERDDDQGSQEEGDYDDGVSVHEGDSSDESDVGDDLYKNEDDRRKLAQ 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSR-IRSSARSADR 180
           M+EL+RE+ILS+RA K+ DK   E +R+K +  + + SRKETPPLPSSR +RSSARSADR
Sbjct: 121 MTELERELILSERADKRGDKKFTEKIRSKRENDRPSRSRKETPPLPSSRGVRSSARSADR 180

Query: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSE 240
           AAAKDDALNELRAKRLKQQDPEAHRKLRDASRG++ SR  SP KRKPFTA SLSSSSQS+
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGSRGLSPVKRKPFTASSLSSSSQSD 240

Query: 241 SESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEEL 300
           SESR  S+DEGSTGDGGM+DSDD+R + G DGPTF+DIKE+TIRRSKLAKW MEPFFEEL
Sbjct: 241 SESRSNSEDEGSTGDGGMVDSDDDRGMQGPDGPTFDDIKEITIRRSKLAKWFMEPFFEEL 300

Query: 301 IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARW 360
           IVGC+VRVGIGRS+SGPIYRLC+VRNVDATEP+R YKLENK T+KYLNV+WGNE+SAARW
Sbjct: 301 IVGCYVRVGIGRSKSGPIYRLCMVRNVDATEPERTYKLENKTTYKYLNVVWGNESSAARW 360

Query: 361 QMAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQ 420
           QMAM+SDS P E+E++Q ++E+ER+GGRM SKQD+LEKKEA+QK   FVYSAATVKQMLQ
Sbjct: 361 QMAMISDSPPQEEEFRQLIRELERSGGRMPSKQDVLEKKEALQKAKTFVYSAATVKQMLQ 420

Query: 421 DKKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIR 480
           +KKS S+RPLNIAAEKDRLRR++++A SK+DEAEVERIK RLQQLEASR+ Q KDAKA+R
Sbjct: 421 EKKSTSSRPLNIAAEKDRLRRDLEIAQSKHDEAEVERIKMRLQQLEASRQAQEKDAKAVR 480

Query: 481 LAEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEA 540
           LAEMNRKNR ENFKNASEL+P+   LKAGEAGYDPFSRRWTRSRNYYV+    A+ AA A
Sbjct: 481 LAEMNRKNRAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVAKPPGADAAAVA 540

Query: 541 AGNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHN 600
             N D +         +A   ++AG AAT AAL+ AAGAGKLVDT+APVD GTESN LH+
Sbjct: 541 --NGDRIGVIASGNGNDARAAAEAGRAATVAALQEAAGAGKLVDTSAPVDEGTESNMLHD 600

Query: 601 FELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRG 660
           FE+PISL  LQ+FGG  GA AGF+ARKQRIEATVG QVPENDGRRHALTLTVSDYKRRRG
Sbjct: 601 FEIPISLNALQRFGGPQGAVAGFMARKQRIEATVGCQVPENDGRRHALTLTVSDYKRRRG 660

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
VIP5_ARATH3.2e-25470.29Protein RTF1 homolog OS=Arabidopsis thaliana GN=VIP5 PE=1 SV=1[more]
RTF1_HUMAN4.0e-3925.19RNA polymerase-associated protein RTF1 homolog OS=Homo sapiens GN=RTF1 PE=1 SV=4[more]
RTF1_MOUSE2.6e-3824.89RNA polymerase-associated protein RTF1 homolog OS=Mus musculus GN=Rtf1 PE=1 SV=1[more]
RTF1_PONAB9.3e-3625.16RNA polymerase-associated protein RTF1 homolog (Fragment) OS=Pongo abelii GN=RTF... [more]
RTF1_CAEEL2.8e-3224.91RNA polymerase-associated protein RTF1 homolog OS=Caenorhabditis elegans GN=rtfo... [more]
Match NameE-valueIdentityDescription
A0A0A0KXW1_CUCSA0.0e+00100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G038650 PE=4 SV=1[more]
W9RDA9_9ROSA4.2e-29379.46RNA polymerase-associated protein RTF1-like protein OS=Morus notabilis GN=L484_0... [more]
A0A067JDU6_JATCU5.1e-29178.73Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21409 PE=4 SV=1[more]
A0A061GFX4_THECC1.6e-28976.89PAF1 complex component isoform 1 OS=Theobroma cacao GN=TCM_029914 PE=4 SV=1[more]
B9RZ59_RICCO1.4e-28877.34RNA polymerase-associated protein RTF1, putative OS=Ricinus communis GN=RCOM_093... [more]
Match NameE-valueIdentityDescription
AT1G61040.11.8e-25570.29 plus-3 domain-containing protein[more]
Match NameE-valueIdentityDescription
gi|449462844|ref|XP_004149150.1|0.0e+00100.00PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis sativus][more]
gi|659107572|ref|XP_008453742.1|0.0e+0097.27PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis melo][more]
gi|703114113|ref|XP_010100559.1|6.0e-29379.46RNA polymerase-associated protein RTF1-like protein [Morus notabilis][more]
gi|802784101|ref|XP_012091565.1|7.3e-29178.73PREDICTED: RNA polymerase-associated protein RTF1 homolog [Jatropha curcas][more]
gi|590624747|ref|XP_007025691.1|2.4e-28976.89PAF1 complex component isoform 1 [Theobroma cacao][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004343Plus-3_dom
Vocabulary: Biological Process
TermDefinition
GO:0006368transcription elongation from RNA polymerase II promoter
GO:0016570histone modification
Vocabulary: Cellular Component
TermDefinition
GO:0016593Cdc73/Paf1 complex
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006352 DNA-templated transcription, initiation
biological_process GO:0016570 histone modification
biological_process GO:0009910 negative regulation of flower development
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006368 transcription elongation from RNA polymerase II promoter
cellular_component GO:0016593 Cdc73/Paf1 complex
molecular_function GO:0003677 DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.201430.1Cucsa.201430.1mRNA


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004343Plus-3 domainPFAMPF03126Plus-3coord: 276..381
score: 9.7
IPR004343Plus-3 domainSMARTSM00719rtf1coord: 271..383
score: 1.5
IPR004343Plus-3 domainPROFILEPS51360PLUS3coord: 271..406
score: 3
IPR004343Plus-3 domainunknownSSF159042Plus3-likecoord: 273..404
score: 2.75
NoneNo IPR availableunknownCoilCoilcoord: 435..467
scor
NoneNo IPR availablePANTHERPTHR13115:SF8RNA POLYMERASE-ASSOCIATED PROTEIN RTF1 HOMOLOGcoord: 1..660
score: 3.3E