BLAST of Cucsa.201430 vs. Swiss-Prot
Match:
VIP5_ARATH (Protein RTF1 homolog OS=Arabidopsis thaliana GN=VIP5 PE=1 SV=1)
HSP 1 Score: 879.0 bits (2270), Expect = 3.2e-254
Identity = 466/663 (70.29%), Postives = 543/663 (81.90%), Query Frame = 1
Query: 1 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
M DLENLLLEAAGRTN+AGR+RH PPS R+REGSYSD SDSRDD SD+DRGYASRKPS
Sbjct: 1 MGDLENLLLEAAGRTNSAGRSRH--PPSSRRREGSYSDGSSDSRDD-SDEDRGYASRKPS 60
Query: 61 GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
GSQVPLKKRL+ ER+D ++ EG D S+REGDSS+ESD GDDLYK+++DR+KLAG
Sbjct: 61 GSQVPLKKRLE-AEREDRA-ARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAG 120
Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSR-IRSSARSADR 180
M+E QREMILS+RA KK DK+ E LR+K + K+ S+KET PLP+SR +RSSARSADR
Sbjct: 121 MTEFQREMILSERADKKGDKNFTEKLRSKRESEKTPVSKKETQPLPASRGVRSSARSADR 180
Query: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSE 240
AAAKDDALNELRAKR+KQQDP A RKLRDAS+G + SR FS TKRKP + +LSSSSQS+
Sbjct: 181 AAAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSTKRKPLASSNLSSSSQSD 240
Query: 241 SESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEEL 300
S+SR QSDDEGS +GGM+DSDD+RS D PTFED+KEVTIRRSKLAKWLMEPFFEEL
Sbjct: 241 SDSRSQSDDEGS--NGGMLDSDDDRS----DVPTFEDVKEVTIRRSKLAKWLMEPFFEEL 300
Query: 301 IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARW 360
IVGCFVRVGIGRS+SGPIYRLC V+NVDAT+PD+ YKLENK THKYLNV+WGNE SAARW
Sbjct: 301 IVGCFVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARW 360
Query: 361 QMAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQ 420
QMAM+SD PLE+EY+QW++EVERT GRM +KQDI EKKEAIQ+ N+FVYSA TVKQMLQ
Sbjct: 361 QMAMISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRTNSFVYSAETVKQMLQ 420
Query: 421 DKKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIR 480
+KKSAS RP+N+AAEKDRLR+E+++A SKNDEA VERIK++++QL+ASR + D KA++
Sbjct: 421 EKKSASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKSKIKQLDASRNKKGVDKKALK 480
Query: 481 LAEMNRKNRVENFKNASELRPL-KDLKAGEAGYDPFSRRWTRSRNYY-VSNAGEANGAAE 540
LAEMN+KNR ENFKNASE++ + LKAGEAGYDPFSRRWTRS NYY N G+ E
Sbjct: 481 LAEMNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYYNGKNKGKDGEENE 540
Query: 541 AAGNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLH 600
AA V A+E +AG AG+ AT AALEAAA AGKL+DT AP+ G E N LH
Sbjct: 541 AA-----VAAAVETNGADAG----AGVEATEAALEAAAEAGKLIDTRAPIGQGAEHNQLH 600
Query: 601 NFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRR 660
NFEL +SL LQK+GG G Q F+ARKQ EATVG +V ENDG+RH LTLTVSDYKRRR
Sbjct: 601 NFELSLSLTALQKYGGPQGVQKAFMARKQLTEATVGCRVAENDGKRHGLTLTVSDYKRRR 643
BLAST of Cucsa.201430 vs. Swiss-Prot
Match:
RTF1_HUMAN (RNA polymerase-associated protein RTF1 homolog OS=Homo sapiens GN=RTF1 PE=1 SV=4)
HSP 1 Score: 164.5 bits (415), Expect = 4.0e-39
Identity = 167/663 (25.19%), Postives = 283/663 (42.68%), Query Frame = 1
Query: 15 TNAAGRNRHSHPPSRRQREGSYS-DAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPT 74
T + +N+ + +++G+ A + SD D S P +V
Sbjct: 105 TFGSNKNKKKGKARKIEKKGTMKKQANKTASSGSSDKDSSAESSAPEEGEVS-------- 164
Query: 75 ERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAGMSELQREMILSDR 134
D D S D D SE D G+DL D++DR +L M+E +RE L +R
Sbjct: 165 --DSDSNSSSSSSDSDSSSE---DEEFHDGYGEDLMGDEEDRARLEQMTEKEREQELFNR 224
Query: 135 ASK----KNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRAAAKDDALNE 194
K K + + L+ K K +K+ ++ S + K E
Sbjct: 225 IEKREVLKRRFEIKKKLKTAKKKEKKEKKKKQEEEQEKKKLTQIQESQVTSHNK-----E 284
Query: 195 LRAKRLKQQDP--EAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSESESRFQSD 254
R+KR ++ D +A +L+ N K++P + S + E E S+
Sbjct: 285 RRSKRDEKLDKKSQAMEELKAEREKRKNRTAELLAKKQPLKTSEVYSDDEEEEEDDKSSE 344
Query: 255 DEGSTGDGGMIDSDDERS-IPGSDGPTF--EDIKEVTIRRSKLAKWLMEPFFEELIVGCF 314
+ D ++E+ IP P E++ V + R KL +W PFF + + GCF
Sbjct: 345 KSDRSSRTSSSDEEEEKEEIPPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCF 404
Query: 315 VRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQMAMV 374
VR+GIG S P+YR+ + V E + Y+L T+K L + GN+ R + V
Sbjct: 405 VRIGIGNHNSKPVYRVAEITGV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFV 464
Query: 375 SDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKE-AIQKVNNFVYSAATVKQMLQDKKS 434
S+ E E+ +W KE + G L D + KKE +I++ N+ ++ +++++++K+
Sbjct: 465 SNQEFTESEFMKW-KEAMFSAGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKER 524
Query: 435 ASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQL----EASRRLQMKDAKAIR 494
P N A +K +L +E +A D+ + ++I+ +L +L EA R + K+ AI
Sbjct: 525 FRKAPPNYAMKKTQLLKEKAMAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI- 584
Query: 495 LAEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAA 554
+ +N++NR N + + + DPF+RR + + VSN+ + A +AA
Sbjct: 585 -SYINQRNREWNIVESEKALVAESHNMKNQQMDPFTRR--QCKPTIVSNSRDP--AVQAA 644
Query: 555 GNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTN--APVDGGTESNSLH 614
A N + +G D A E + G GK D N + D + +H
Sbjct: 645 ------ILAQLNAKYGSGVLPD-------APKEMSKGQGKDKDLNSKSASDLSEDLFKVH 704
Query: 615 NFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRR 661
+F++ I L + AL A + P DG +L + DYK+RR
Sbjct: 705 DFDVKIDLQVPSSESKAL--------------AITSKAPPAKDGAPRR-SLNLEDYKKRR 710
BLAST of Cucsa.201430 vs. Swiss-Prot
Match:
RTF1_MOUSE (RNA polymerase-associated protein RTF1 homolog OS=Mus musculus GN=Rtf1 PE=1 SV=1)
HSP 1 Score: 161.8 bits (408), Expect = 2.6e-38
Identity = 165/663 (24.89%), Postives = 283/663 (42.68%), Query Frame = 1
Query: 15 TNAAGRNRHSHPPSRRQREGSYS-DAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPT 74
T + +N+ + +++G+ A + SD D S P +V
Sbjct: 110 TFGSNKNKKKGKTRKVEKKGAMKKQANKAASSGSSDRDSSAESSAPEEGEVS-------- 169
Query: 75 ERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAGMSELQREMILSDR 134
D + S D D SE D G+DL D++DR +L M+E +RE L +R
Sbjct: 170 --DSESSSSSSSSDSDSSSE---DEEFHDGYGEDLMGDEEDRARLEQMTEKEREQELFNR 229
Query: 135 ASK----KNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRAAAKDDALNE 194
K K + + L+ K K +K+ ++ S + K E
Sbjct: 230 IEKREVLKRRFEIKKKLKTAKKKEKKEKKKKQEEEQEKKKLTQIQESQVTSHNK-----E 289
Query: 195 LRAKRLKQQDP--EAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSESESRFQSD 254
R+KR ++ D +A +L+ N K++P + S + E + S+
Sbjct: 290 RRSKRDEKLDKKSQAMEELKAEREKRKNRTAELLAKKQPLKTSEVYSDDEEEEDDDKSSE 349
Query: 255 DEGSTGDGGMIDSDDERS-IPGSDGPTF--EDIKEVTIRRSKLAKWLMEPFFEELIVGCF 314
+ D ++E+ IP P E++ V + R KL +W PFF + + GCF
Sbjct: 350 KSDRSSRTSSSDEEEEKEEIPPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCF 409
Query: 315 VRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQMAMV 374
VR+GIG S P+YR+ + V E + Y+L T+K L + GN+ R + V
Sbjct: 410 VRIGIGNHNSKPVYRVAEITGV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFV 469
Query: 375 SDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKE-AIQKVNNFVYSAATVKQMLQDKKS 434
S+ E E+ +W KE + G L D + KKE +I++ N+ ++ +++++++K+
Sbjct: 470 SNQEFTESEFMKW-KEAMFSAGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKER 529
Query: 435 ASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQL----EASRRLQMKDAKAIR 494
P N A +K +L +E +A D+ + ++I+ +L +L EA R + K+ AI
Sbjct: 530 FRKAPPNYAMKKTQLLKEKAMAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI- 589
Query: 495 LAEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAA 554
+ +N++NR N + + + DPF+RR + + VSN+ + A +AA
Sbjct: 590 -SYINQRNREWNIVESEKALVAESHNMRNQQMDPFTRR--QCKPTIVSNSRDP--AVQAA 649
Query: 555 GNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPV--DGGTESNSLH 614
A N + +G D A E + G GK D N+ D + +H
Sbjct: 650 ------ILAQLNAKYGSGVLPD-------APKEMSKGQGKDKDLNSKTASDLSEDLFKVH 709
Query: 615 NFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRR 661
+F++ I L + AL A + P DG +L + DYK+RR
Sbjct: 710 DFDVKIDLQVPSSESKAL--------------AITSKAPPAKDGAPRR-SLNLEDYKKRR 715
BLAST of Cucsa.201430 vs. Swiss-Prot
Match:
RTF1_PONAB (RNA polymerase-associated protein RTF1 homolog (Fragment) OS=Pongo abelii GN=RTF1 PE=2 SV=2)
HSP 1 Score: 153.3 bits (386), Expect = 9.3e-36
Identity = 153/608 (25.16%), Postives = 263/608 (43.26%), Query Frame = 1
Query: 15 TNAAGRNRHSHPPSRRQREGSYS-DAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPT 74
T + +N+ + +++G+ A + SD D S P +V
Sbjct: 100 TFGSNKNKKKGKARKIEKKGTMKKQANKTASSGSSDKDSSAESSAPEEGEVS-------- 159
Query: 75 ERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAGMSELQREMILSDR 134
D D S D D SE D G+DL D++DR +L M+E +RE L +R
Sbjct: 160 --DSDSNSSSSSSDSDSSSE---DEEFHDGYGEDLMGDEEDRARLEQMTEKEREQELFNR 219
Query: 135 ASK----KNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRAAAKDDALNE 194
K K + + L+ K K +K+ ++ S + K E
Sbjct: 220 IEKREVLKRRFEIKKKLKTAKKKEKKEKKKKQEEEQEKKKLTQIQESQVTSHNK-----E 279
Query: 195 LRAKRLKQQDP--EAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSESESRFQSD 254
R+KR ++ D +A +L+ N K++P + S + E E S+
Sbjct: 280 RRSKRDEKLDKKSQAMEELKAEREKRKNRTVELLAKKQPLKTSEVYSDDEEEEEDDKSSE 339
Query: 255 DEGSTGDGGMIDSDDERS-IPGSDGPTF--EDIKEVTIRRSKLAKWLMEPFFEELIVGCF 314
+ D ++E+ IP P E++ V + R KL +W PFF + + GCF
Sbjct: 340 KSDRSSRTSSSDEEEEKEEIPPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCF 399
Query: 315 VRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQMAMV 374
VR+GIG S P+YR+ + V E + Y+L T+K L + GN+ R + V
Sbjct: 400 VRIGIGNHNSKPVYRVAEITGV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFV 459
Query: 375 SDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKE-AIQKVNNFVYSAATVKQMLQDKKS 434
S+ E E+ +W KE + G L D + KKE +I++ N+ ++ +++++++K+
Sbjct: 460 SNQEFTESEFMKW-KEAMFSAGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKER 519
Query: 435 ASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQL----EASRRLQMKDAKAIR 494
P N A +K +L +E +A D+ + ++I+ +L +L EA R + K+ AI
Sbjct: 520 FRKAPPNYAMKKTQLLKEKAMAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI- 579
Query: 495 LAEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAA 554
+ +N++NR N + + + DPF+RR + + VSN+ + A +AA
Sbjct: 580 -SYINQRNREWNIVESEKALVAESHNMKNQQMDPFTRR--QCKPTIVSNSRDP--AVQAA 639
Query: 555 GNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTN--APVDGGTESNSLH 606
A N + +G D A E + G GK D N + D + +H
Sbjct: 640 ------ILAQLNAKYGSGVLPD-------APKEMSKGQGKDKDLNSKSASDLSEDLFKVH 665
BLAST of Cucsa.201430 vs. Swiss-Prot
Match:
RTF1_CAEEL (RNA polymerase-associated protein RTF1 homolog OS=Caenorhabditis elegans GN=rtfo-1 PE=2 SV=1)
HSP 1 Score: 141.7 bits (356), Expect = 2.8e-32
Identity = 146/586 (24.91%), Postives = 256/586 (43.69%), Query Frame = 1
Query: 45 DDDSDDDRGYASRKPSGSQVPLKKRLDPTERDDDGGSQE----EGEDEDVGSEREGDSSD 104
D DSD D G KP + D + D D + + + R SSD
Sbjct: 22 DSDSDSDAGPKPGKPLST--------DSSASDSDAEKPQAKPAKKKTLTKRKRRATGSSD 81
Query: 105 ESDVGDDLYKDDDDRRKLAGMSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRK 164
+ V DDL+ D +D+ + ++EL++E + +R + + E + ++ K S K
Sbjct: 82 DDQVDDDLFADKEDKARWKKLTELEKEQEIFERMEARENAIAREEIAQQLAKKAKKSSEK 141
Query: 165 ETPPLPSSRIRSSARSAD--RAAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRR 224
++ S A + A D+ +E+ A + D K ++A N R+
Sbjct: 142 GVKTEKRRKMNSGGSDAGSPKRKASSDSDSEMDAAFHRPSDINRKHKEKNAMDALKNKRK 201
Query: 225 FSPTKRKP---------FTAPSLSSSSQSESESRFQSDDEGSTGDGGMIDSDDERSIPGS 284
K F A S SSSS S SES S + + + D I
Sbjct: 202 EIEKKNAKNEALSIDAVFGANSGSSSSSSSSESSRSSSSSRESSPERVSEKD---KIVKK 261
Query: 285 DGPTFEDIKEVTIRRSKLAKWLMEPFFEELIVGCFVRVGIGR-SRSGPIYRLCLVRNVDA 344
D +++ + R KL+ + PFF+ +VGC+VR+G G+ S SG YR+ + V+
Sbjct: 262 DVDGLSELRRARLSRHKLSLMIHAPFFDSTVVGCYVRLGQGQMSGSGSKYRIWKIVGVE- 321
Query: 345 TEPDRQYKLENKITHKYLNVIWGNEASAARWQMAMVSDSAPLEDEYKQWVKEVERTGGRM 404
E ++ Y+LE K T+K + N S ++M VS++ + E+ +W+ +R G
Sbjct: 322 -ESNKVYELEGKKTNKIIKC--QNGGSERPFRMQFVSNADFEQIEFDEWLLACKRHGN-- 381
Query: 405 LSKQDILE-KKEAIQKVNNFVYSAATVKQMLQDKKSASARPLNIAAEKDRLRREMDVAVS 464
L DI++ KK+ I+K N YS V M+++K P N A K ++ ++A
Sbjct: 382 LPTVDIMDKKKQDIEKAINHKYSDKEVDLMIKEKSKYQTVPRNFAMTKANWSKQKELAQQ 441
Query: 465 KNDEAEVERIKTRLQQLE-ASRRLQMKDAKAI-RLAEMNRKNRVENFKNASELRPLKDLK 524
+ D E E+I+T++ ++E + L+ + +K+I +A +N +NR K+ LK +
Sbjct: 442 RGDIREAEQIQTKIDEIERQADELEKERSKSISAIAFINHRNR-SKIKDQVLSGQLKIEE 501
Query: 525 AGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAGNSDNVTPALENTRTEAGGTSDAGMA 584
+ DPF+R+ R + +G A+ ++ N+ SD G
Sbjct: 502 NSQD--DPFTRKKGGMR-VVSGSKSRLDGTLSASSSTTNL--------------SDGGKD 561
Query: 585 ATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFELPISLAMLQKF 612
+++ + + + T+ +SLH+F+L I L L+ F
Sbjct: 562 KSSSLAKPTQ-----PPPSTQIKKKTDISSLHDFDLDIDLGKLKDF 567
BLAST of Cucsa.201430 vs. TrEMBL
Match:
A0A0A0KXW1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G038650 PE=4 SV=1)
HSP 1 Score: 1296.2 bits (3353), Expect = 0.0e+00
Identity = 660/660 (100.00%), Postives = 660/660 (100.00%), Query Frame = 1
Query: 1 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS
Sbjct: 1 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
Query: 61 GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG
Sbjct: 61 GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180
MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180
Query: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240
AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240
Query: 241 ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300
ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300
Query: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360
VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360
Query: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420
MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD
Sbjct: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420
Query: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480
KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL
Sbjct: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480
Query: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540
AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG
Sbjct: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540
Query: 541 NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600
NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE
Sbjct: 541 NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600
Query: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660
LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660
BLAST of Cucsa.201430 vs. TrEMBL
Match:
W9RDA9_9ROSA (RNA polymerase-associated protein RTF1-like protein OS=Morus notabilis GN=L484_012115 PE=4 SV=1)
HSP 1 Score: 1015.0 bits (2623), Expect = 4.2e-293
Identity = 526/662 (79.46%), Postives = 579/662 (87.46%), Query Frame = 1
Query: 1 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
MA+LENLLLEAAGRT +AGRNRHS PPSRR+REGSYSD GSDSRDDDSDDDRGYA+RKPS
Sbjct: 1 MAELENLLLEAAGRTRSAGRNRHSIPPSRRRREGSYSDGGSDSRDDDSDDDRGYANRKPS 60
Query: 61 GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
GSQVPLKKRLDPTE DDD GS+EEG+D D GS+REGDS ESDVG DLYKDDDDRRKLA
Sbjct: 61 GSQVPLKKRLDPTEMDDDQGSEEEGDD-DRGSDREGDS--ESDVGSDLYKDDDDRRKLAE 120
Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMD-KGKSAPSRKETPPLPSSRIRSSARSADR 180
M+ELQREMIL DRASKK DK+L E LR K D KGK+ SRKET PLPSSR+RSSARSADR
Sbjct: 121 MTELQREMILLDRASKKEDKNLKEKLRPKWDNKGKATQSRKET-PLPSSRVRSSARSADR 180
Query: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSE 240
AAAKDDALNELRAKRLKQQDPEAH KLRDASRG + SR KRK +TA SLSSSSQS+
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHGKLRDASRGGSGSRNLLHNKRKSYTATSLSSSSQSD 240
Query: 241 SESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEEL 300
SES QS+DEGSTGDGGMIDSDDER IPGS+G TF+DIKEVT+RRSKLAKWLMEPFFEEL
Sbjct: 241 SESESQSEDEGSTGDGGMIDSDDERGIPGSEGLTFDDIKEVTVRRSKLAKWLMEPFFEEL 300
Query: 301 IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARW 360
IVGCFVRVGIGRS+SGPIYRLC+VRNVDA+EPDRQYKL+NKITHKYLNV+WGNE SAARW
Sbjct: 301 IVGCFVRVGIGRSKSGPIYRLCMVRNVDASEPDRQYKLDNKITHKYLNVVWGNENSAARW 360
Query: 361 QMAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQ 420
QMAMVSDS P E+E+KQWV+EVER+GGRM +K DIL+KKE+I+K+N FVYSAATVKQMLQ
Sbjct: 361 QMAMVSDSVPNEEEFKQWVREVERSGGRMPTKHDILDKKESIKKINTFVYSAATVKQMLQ 420
Query: 421 DKKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIR 480
+KKSASARPLNIA EKDRLRRE++VA SKNDE EV+RIKTRLQ+LEASR+ + DAKAIR
Sbjct: 421 EKKSASARPLNIALEKDRLRRELEVAQSKNDEVEVDRIKTRLQELEASRKAKQTDAKAIR 480
Query: 481 LAEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEA 540
LAEMNRKNRVENFKNASEL+P+ LKAGEAGYDPFSRRWTRSRNYYV GE + A
Sbjct: 481 LAEMNRKNRVENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVGKPGEVKEDSGA 540
Query: 541 AGNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHN 600
++ + EN ++AG+AAT AALEAAA AGKLVDTNAPVD GT SN LHN
Sbjct: 541 NAGNNGASTDAENNGRHGIVAAEAGIAATEAALEAAADAGKLVDTNAPVDQGTVSNMLHN 600
Query: 601 FELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRG 660
FELPISL++LQKFGG GAQAGF+ARKQRIEATVG +VPENDGRRHALTL+V DYKRRRG
Sbjct: 601 FELPISLSVLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLSVGDYKRRRG 658
BLAST of Cucsa.201430 vs. TrEMBL
Match:
A0A067JDU6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21409 PE=4 SV=1)
HSP 1 Score: 1008.1 bits (2605), Expect = 5.1e-291
Identity = 522/663 (78.73%), Postives = 588/663 (88.69%), Query Frame = 1
Query: 1 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
MADLENLLLEAAGRT ++GRNR++HPPSRR+REGSYSD GSDSRD+DSDDDRGYASRKPS
Sbjct: 1 MADLENLLLEAAGRTGSSGRNRNAHPPSRRRREGSYSDGGSDSRDEDSDDDRGYASRKPS 60
Query: 61 GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
GSQVPLKKRLDP ERDDD GSQEEG +D S+REGDSSDESDVGDDLYKD+DDRRKLA
Sbjct: 61 GSQVPLKKRLDPAERDDDQGSQEEGGYDDGASDREGDSSDESDVGDDLYKDEDDRRKLAQ 120
Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSR-IRSSARSADR 180
MSEL+REMILS+RA KK DK+L E +R+K D ++ SRKETPPLPSSR +R+SARSADR
Sbjct: 121 MSELEREMILSERADKKGDKNLTERIRSKRDSERATRSRKETPPLPSSRGVRTSARSADR 180
Query: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSE 240
AAAKDDALNELRAKRLKQQDPEAHRKLRD SRG + SR SP +RK FT+ SLSSSS SE
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDVSRGTSGSRGVSPVRRKRFTSASLSSSS-SE 240
Query: 241 SESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEEL 300
S+SR S+DE STGDGGM DSD++R PGS+G T++DI+EVTIRRSKLAKWLMEP+FEEL
Sbjct: 241 SDSRSHSEDEASTGDGGMADSDEDRE-PGSEGLTYDDIREVTIRRSKLAKWLMEPWFEEL 300
Query: 301 IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARW 360
IVGCFVRVGIGRS+SGPIYRLCLVRNVDA +PDR YKLENK T+KYLNVIWGNE+SAARW
Sbjct: 301 IVGCFVRVGIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAARW 360
Query: 361 QMAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQ 420
QMAMVSDSAP EDEYKQWV+EVER+GGRM +KQDILEKKEAI+K N FVYSAATVKQMLQ
Sbjct: 361 QMAMVSDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIKKSNTFVYSAATVKQMLQ 420
Query: 421 DKKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIR 480
+KKSAS RPLN+AAEKDRLRRE++VA K D+AEVERI+ R+Q+LEASR+ Q KDAKAIR
Sbjct: 421 EKKSASTRPLNVAAEKDRLRRELEVAQMKQDDAEVERIRARIQELEASRQAQEKDAKAIR 480
Query: 481 LAEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEA 540
LAEMNRKNR ENF+NASEL+P+ LKAGEAGYDPFSRRWTRSRNYYVS G A+ AAEA
Sbjct: 481 LAEMNRKNRAENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPGGADVAAEA 540
Query: 541 AGNSDNVTPALENTRTEAGGT-SDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLH 600
++N T A+ ++ A GT ++AGMAATAAALEAAA AGKLVDT APVD GTESN+LH
Sbjct: 541 ---NNNGTAAVAHSNGAATGTLAEAGMAATAAALEAAADAGKLVDTAAPVDQGTESNTLH 600
Query: 601 NFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRR 660
+F+LPISL L+KFGGA GA+AGF+ARKQ+IEATVG +VPENDGRRHALTLTVSDYKRRR
Sbjct: 601 DFDLPISLTALEKFGGAKGAKAGFMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRR 658
BLAST of Cucsa.201430 vs. TrEMBL
Match:
A0A061GFX4_THECC (PAF1 complex component isoform 1 OS=Theobroma cacao GN=TCM_029914 PE=4 SV=1)
HSP 1 Score: 1003.0 bits (2592), Expect = 1.6e-289
Identity = 509/662 (76.89%), Postives = 574/662 (86.71%), Query Frame = 1
Query: 1 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
MADLENLLLEAAGRT GRNRHS PPSRR+REGSYSD GSDSRDDDSDDD GYASRKPS
Sbjct: 1 MADLENLLLEAAGRTGTGGRNRHSLPPSRRRREGSYSDGGSDSRDDDSDDDHGYASRKPS 60
Query: 61 GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
GSQVPLKKRLDP ERDDD GSQEEG+ +D S EGDSSDESDVGDDLYK++DDRRKLA
Sbjct: 61 GSQVPLKKRLDPAERDDDQGSQEEGDYDDGVSVHEGDSSDESDVGDDLYKNEDDRRKLAQ 120
Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSR-IRSSARSADR 180
M+EL+RE+ILS+RA K+ DK E +R+K + + + SRKETPPLPSSR +RSSARSADR
Sbjct: 121 MTELERELILSERADKRGDKKFTEKIRSKRENDRPSRSRKETPPLPSSRGVRSSARSADR 180
Query: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSE 240
AAAKDDALNELRAKRLKQQDPEAHRKLRDASRG++ SR SP KRKPFTA SLSSSSQS+
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGSRGLSPVKRKPFTASSLSSSSQSD 240
Query: 241 SESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEEL 300
SESR S+DEGSTGDGGM+DSDD+R + G DGPTF+DIKE+TIRRSKLAKW MEPFFEEL
Sbjct: 241 SESRSNSEDEGSTGDGGMVDSDDDRGMQGPDGPTFDDIKEITIRRSKLAKWFMEPFFEEL 300
Query: 301 IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARW 360
IVGC+VRVGIGRS+SGPIYRLC+VRNVDATEP+R YKLENK T+KYLNV+WGNE+SAARW
Sbjct: 301 IVGCYVRVGIGRSKSGPIYRLCMVRNVDATEPERTYKLENKTTYKYLNVVWGNESSAARW 360
Query: 361 QMAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQ 420
QMAM+SDS P E+E++Q ++E+ER+GGRM SKQD+LEKKEA+QK FVYSAATVKQMLQ
Sbjct: 361 QMAMISDSPPQEEEFRQLIRELERSGGRMPSKQDVLEKKEALQKAKTFVYSAATVKQMLQ 420
Query: 421 DKKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIR 480
+KKS S+RPLNIAAEKDRLRR++++A SK+DEAEVERIK RLQQLEASR+ Q KDAKA+R
Sbjct: 421 EKKSTSSRPLNIAAEKDRLRRDLEIAQSKHDEAEVERIKMRLQQLEASRQAQEKDAKAVR 480
Query: 481 LAEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEA 540
LAEMNRKNR ENFKNASEL+P+ LKAGEAGYDPFSRRWTRSRNYYV+ A+ AA A
Sbjct: 481 LAEMNRKNRAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVAKPPGADAAAVA 540
Query: 541 AGNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHN 600
N D + +A ++AG AAT AAL+ AAGAGKLVDT+APVD GTESN LH+
Sbjct: 541 --NGDRIGVIASGNGNDARAAAEAGRAATVAALQEAAGAGKLVDTSAPVDEGTESNMLHD 600
Query: 601 FELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRG 660
FE+PISL LQ+FGG GA AGF+ARKQRIEATVG QVPENDGRRHALTLTVSDYKRRRG
Sbjct: 601 FEIPISLNALQRFGGPQGAVAGFMARKQRIEATVGCQVPENDGRRHALTLTVSDYKRRRG 660
BLAST of Cucsa.201430 vs. TrEMBL
Match:
B9RZ59_RICCO (RNA polymerase-associated protein RTF1, putative OS=Ricinus communis GN=RCOM_0935630 PE=4 SV=1)
HSP 1 Score: 1000.0 bits (2584), Expect = 1.4e-288
Identity = 512/662 (77.34%), Postives = 577/662 (87.16%), Query Frame = 1
Query: 1 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
MADLENLLLEAAGRT +GRNR++ PPSRR+REGSYSD GSDSRDDDSDDDRGY+SRKPS
Sbjct: 1 MADLENLLLEAAGRTGTSGRNRNALPPSRRRREGSYSDGGSDSRDDDSDDDRGYSSRKPS 60
Query: 61 GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
GSQVPLKKRLDPTERDDD GSQ+EG+ +D S+REGDSSD SDVG+DLYK++DDRRKLA
Sbjct: 61 GSQVPLKKRLDPTERDDDQGSQDEGDYDDGNSDREGDSSDGSDVGEDLYKNEDDRRKLAQ 120
Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSR-IRSSARSADR 180
MSEL+REMILS+RA KK DK+L E +R+K + ++ SRKETPPLPSSR +R+SARSADR
Sbjct: 121 MSELEREMILSERADKKGDKNLTERIRSKRESERTTRSRKETPPLPSSRGVRTSARSADR 180
Query: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSE 240
AAAKDDALNEL+A+RLKQQDPEAHRKLRDASR + SR FSP KRK FT+ SLSSSS SE
Sbjct: 181 AAAKDDALNELKARRLKQQDPEAHRKLRDASRRGSGSRGFSPIKRKRFTSASLSSSS-SE 240
Query: 241 SESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEEL 300
SESR S+DEGSTGDGGM DSDD+ PGS GPTF+DI+E+TIRRSKLAKW MEP+FEEL
Sbjct: 241 SESRSHSEDEGSTGDGGMADSDDDGE-PGSQGPTFDDIREITIRRSKLAKWFMEPWFEEL 300
Query: 301 IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARW 360
IVGCFVRVGIGRS+SGPIYRLCLVRNVDA +PDR YKLENK T+KYLNVIWGNE+SAARW
Sbjct: 301 IVGCFVRVGIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAARW 360
Query: 361 QMAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQ 420
QMAM+SDSAP EDEYKQWV+EVER+GGRM +KQDILEKKEAI+K N FVYSAATVKQMLQ
Sbjct: 361 QMAMISDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIRKSNTFVYSAATVKQMLQ 420
Query: 421 DKKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIR 480
+KKSAS+RPLN+AAEKDRLRRE++VA SK D+AEVERI+ R+Q+LEASR+ Q KDAKAIR
Sbjct: 421 EKKSASSRPLNVAAEKDRLRRELEVAQSKQDDAEVERIRARIQELEASRQTQGKDAKAIR 480
Query: 481 LAEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEA 540
LAEMNRKNR ENF+NASEL+P+ LKAGEAGYDPFSRRWTRSRNYYVS + AA
Sbjct: 481 LAEMNRKNRAENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPAGGDAAAAT 540
Query: 541 AGNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHN 600
+ T + AG +++AGMAATAAALEAAA AGKLVDT APVD GTESN+LHN
Sbjct: 541 NNEASGTVAVANKTESAAGVSAEAGMAATAAALEAAADAGKLVDTAAPVDQGTESNTLHN 600
Query: 601 FELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRG 660
FELPISL LQKFGGA GAQAGF+ARKQRIEAT+G +V END +RH LTLTVSDYKRRRG
Sbjct: 601 FELPISLTALQKFGGAQGAQAGFMARKQRIEATIGCRVSENDEKRHVLTLTVSDYKRRRG 660
BLAST of Cucsa.201430 vs. TAIR10
Match:
AT1G61040.1 (AT1G61040.1 plus-3 domain-containing protein)
HSP 1 Score: 879.0 bits (2270), Expect = 1.8e-255
Identity = 466/663 (70.29%), Postives = 543/663 (81.90%), Query Frame = 1
Query: 1 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
M DLENLLLEAAGRTN+AGR+RH PPS R+REGSYSD SDSRDD SD+DRGYASRKPS
Sbjct: 1 MGDLENLLLEAAGRTNSAGRSRH--PPSSRRREGSYSDGSSDSRDD-SDEDRGYASRKPS 60
Query: 61 GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
GSQVPLKKRL+ ER+D ++ EG D S+REGDSS+ESD GDDLYK+++DR+KLAG
Sbjct: 61 GSQVPLKKRLE-AEREDRA-ARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAG 120
Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSR-IRSSARSADR 180
M+E QREMILS+RA KK DK+ E LR+K + K+ S+KET PLP+SR +RSSARSADR
Sbjct: 121 MTEFQREMILSERADKKGDKNFTEKLRSKRESEKTPVSKKETQPLPASRGVRSSARSADR 180
Query: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSE 240
AAAKDDALNELRAKR+KQQDP A RKLRDAS+G + SR FS TKRKP + +LSSSSQS+
Sbjct: 181 AAAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSTKRKPLASSNLSSSSQSD 240
Query: 241 SESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEEL 300
S+SR QSDDEGS +GGM+DSDD+RS D PTFED+KEVTIRRSKLAKWLMEPFFEEL
Sbjct: 241 SDSRSQSDDEGS--NGGMLDSDDDRS----DVPTFEDVKEVTIRRSKLAKWLMEPFFEEL 300
Query: 301 IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARW 360
IVGCFVRVGIGRS+SGPIYRLC V+NVDAT+PD+ YKLENK THKYLNV+WGNE SAARW
Sbjct: 301 IVGCFVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARW 360
Query: 361 QMAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQ 420
QMAM+SD PLE+EY+QW++EVERT GRM +KQDI EKKEAIQ+ N+FVYSA TVKQMLQ
Sbjct: 361 QMAMISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRTNSFVYSAETVKQMLQ 420
Query: 421 DKKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIR 480
+KKSAS RP+N+AAEKDRLR+E+++A SKNDEA VERIK++++QL+ASR + D KA++
Sbjct: 421 EKKSASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKSKIKQLDASRNKKGVDKKALK 480
Query: 481 LAEMNRKNRVENFKNASELRPL-KDLKAGEAGYDPFSRRWTRSRNYY-VSNAGEANGAAE 540
LAEMN+KNR ENFKNASE++ + LKAGEAGYDPFSRRWTRS NYY N G+ E
Sbjct: 481 LAEMNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYYNGKNKGKDGEENE 540
Query: 541 AAGNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLH 600
AA V A+E +AG AG+ AT AALEAAA AGKL+DT AP+ G E N LH
Sbjct: 541 AA-----VAAAVETNGADAG----AGVEATEAALEAAAEAGKLIDTRAPIGQGAEHNQLH 600
Query: 601 NFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRR 660
NFEL +SL LQK+GG G Q F+ARKQ EATVG +V ENDG+RH LTLTVSDYKRRR
Sbjct: 601 NFELSLSLTALQKYGGPQGVQKAFMARKQLTEATVGCRVAENDGKRHGLTLTVSDYKRRR 643
BLAST of Cucsa.201430 vs. NCBI nr
Match:
gi|449462844|ref|XP_004149150.1| (PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis sativus])
HSP 1 Score: 1296.2 bits (3353), Expect = 0.0e+00
Identity = 660/660 (100.00%), Postives = 660/660 (100.00%), Query Frame = 1
Query: 1 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS
Sbjct: 1 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
Query: 61 GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG
Sbjct: 61 GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180
MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180
Query: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240
AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240
Query: 241 ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300
ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300
Query: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360
VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360
Query: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420
MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD
Sbjct: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420
Query: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480
KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL
Sbjct: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480
Query: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540
AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG
Sbjct: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540
Query: 541 NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600
NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE
Sbjct: 541 NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600
Query: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660
LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660
BLAST of Cucsa.201430 vs. NCBI nr
Match:
gi|659107572|ref|XP_008453742.1| (PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis melo])
HSP 1 Score: 1266.1 bits (3275), Expect = 0.0e+00
Identity = 642/660 (97.27%), Postives = 651/660 (98.64%), Query Frame = 1
Query: 1 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
MADLENLLLEAAGRTNA G NRHSHPPSRRQREGSYSD GSDSRDDDSDD+RGYASRKPS
Sbjct: 1 MADLENLLLEAAGRTNAGGGNRHSHPPSRRQREGSYSDGGSDSRDDDSDDERGYASRKPS 60
Query: 61 GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
GSQVPLKKRLDPTERDDDGGS EEGEDEDVGSE EGDSSDESDVGDDLYKDDDDRRKLAG
Sbjct: 61 GSQVPLKKRLDPTERDDDGGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 120
Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180
MSELQREMILSDRASKKNDKHLYESLRAKMDKGK+APSRKETPPLPSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKTAPSRKETPPLPSSRIRSSARSADRA 180
Query: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240
AAKDDALNELRAKRLKQQDPEAHRKLRDASRGN+N+RRFSPTKRKPFTAPSLSSSSQSES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNSNNRRFSPTKRKPFTAPSLSSSSQSES 240
Query: 241 ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300
ESRFQSDDEGSTGDGGMIDSDDERS+PGSDGPTFEDIKE+TIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERSMPGSDGPTFEDIKEITIRRSKLAKWLMEPFFEELI 300
Query: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360
VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNE SAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNENSAARWQ 360
Query: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420
MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQD+LEKK+AIQKVNNFVYSAATVKQMLQD
Sbjct: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDVLEKKDAIQKVNNFVYSAATVKQMLQD 420
Query: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480
KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIK RLQQLEASRRLQMKDAKAIRL
Sbjct: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKGRLQQLEASRRLQMKDAKAIRL 480
Query: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540
AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG
Sbjct: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540
Query: 541 NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600
NSD VTPALE+TRT AGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE
Sbjct: 541 NSDTVTPALESTRTGAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600
Query: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660
LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660
BLAST of Cucsa.201430 vs. NCBI nr
Match:
gi|703114113|ref|XP_010100559.1| (RNA polymerase-associated protein RTF1-like protein [Morus notabilis])
HSP 1 Score: 1015.0 bits (2623), Expect = 6.0e-293
Identity = 526/662 (79.46%), Postives = 579/662 (87.46%), Query Frame = 1
Query: 1 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
MA+LENLLLEAAGRT +AGRNRHS PPSRR+REGSYSD GSDSRDDDSDDDRGYA+RKPS
Sbjct: 1 MAELENLLLEAAGRTRSAGRNRHSIPPSRRRREGSYSDGGSDSRDDDSDDDRGYANRKPS 60
Query: 61 GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
GSQVPLKKRLDPTE DDD GS+EEG+D D GS+REGDS ESDVG DLYKDDDDRRKLA
Sbjct: 61 GSQVPLKKRLDPTEMDDDQGSEEEGDD-DRGSDREGDS--ESDVGSDLYKDDDDRRKLAE 120
Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMD-KGKSAPSRKETPPLPSSRIRSSARSADR 180
M+ELQREMIL DRASKK DK+L E LR K D KGK+ SRKET PLPSSR+RSSARSADR
Sbjct: 121 MTELQREMILLDRASKKEDKNLKEKLRPKWDNKGKATQSRKET-PLPSSRVRSSARSADR 180
Query: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSE 240
AAAKDDALNELRAKRLKQQDPEAH KLRDASRG + SR KRK +TA SLSSSSQS+
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHGKLRDASRGGSGSRNLLHNKRKSYTATSLSSSSQSD 240
Query: 241 SESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEEL 300
SES QS+DEGSTGDGGMIDSDDER IPGS+G TF+DIKEVT+RRSKLAKWLMEPFFEEL
Sbjct: 241 SESESQSEDEGSTGDGGMIDSDDERGIPGSEGLTFDDIKEVTVRRSKLAKWLMEPFFEEL 300
Query: 301 IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARW 360
IVGCFVRVGIGRS+SGPIYRLC+VRNVDA+EPDRQYKL+NKITHKYLNV+WGNE SAARW
Sbjct: 301 IVGCFVRVGIGRSKSGPIYRLCMVRNVDASEPDRQYKLDNKITHKYLNVVWGNENSAARW 360
Query: 361 QMAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQ 420
QMAMVSDS P E+E+KQWV+EVER+GGRM +K DIL+KKE+I+K+N FVYSAATVKQMLQ
Sbjct: 361 QMAMVSDSVPNEEEFKQWVREVERSGGRMPTKHDILDKKESIKKINTFVYSAATVKQMLQ 420
Query: 421 DKKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIR 480
+KKSASARPLNIA EKDRLRRE++VA SKNDE EV+RIKTRLQ+LEASR+ + DAKAIR
Sbjct: 421 EKKSASARPLNIALEKDRLRRELEVAQSKNDEVEVDRIKTRLQELEASRKAKQTDAKAIR 480
Query: 481 LAEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEA 540
LAEMNRKNRVENFKNASEL+P+ LKAGEAGYDPFSRRWTRSRNYYV GE + A
Sbjct: 481 LAEMNRKNRVENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVGKPGEVKEDSGA 540
Query: 541 AGNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHN 600
++ + EN ++AG+AAT AALEAAA AGKLVDTNAPVD GT SN LHN
Sbjct: 541 NAGNNGASTDAENNGRHGIVAAEAGIAATEAALEAAADAGKLVDTNAPVDQGTVSNMLHN 600
Query: 601 FELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRG 660
FELPISL++LQKFGG GAQAGF+ARKQRIEATVG +VPENDGRRHALTL+V DYKRRRG
Sbjct: 601 FELPISLSVLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLSVGDYKRRRG 658
BLAST of Cucsa.201430 vs. NCBI nr
Match:
gi|802784101|ref|XP_012091565.1| (PREDICTED: RNA polymerase-associated protein RTF1 homolog [Jatropha curcas])
HSP 1 Score: 1008.1 bits (2605), Expect = 7.3e-291
Identity = 522/663 (78.73%), Postives = 588/663 (88.69%), Query Frame = 1
Query: 1 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
MADLENLLLEAAGRT ++GRNR++HPPSRR+REGSYSD GSDSRD+DSDDDRGYASRKPS
Sbjct: 1 MADLENLLLEAAGRTGSSGRNRNAHPPSRRRREGSYSDGGSDSRDEDSDDDRGYASRKPS 60
Query: 61 GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
GSQVPLKKRLDP ERDDD GSQEEG +D S+REGDSSDESDVGDDLYKD+DDRRKLA
Sbjct: 61 GSQVPLKKRLDPAERDDDQGSQEEGGYDDGASDREGDSSDESDVGDDLYKDEDDRRKLAQ 120
Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSR-IRSSARSADR 180
MSEL+REMILS+RA KK DK+L E +R+K D ++ SRKETPPLPSSR +R+SARSADR
Sbjct: 121 MSELEREMILSERADKKGDKNLTERIRSKRDSERATRSRKETPPLPSSRGVRTSARSADR 180
Query: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSE 240
AAAKDDALNELRAKRLKQQDPEAHRKLRD SRG + SR SP +RK FT+ SLSSSS SE
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDVSRGTSGSRGVSPVRRKRFTSASLSSSS-SE 240
Query: 241 SESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEEL 300
S+SR S+DE STGDGGM DSD++R PGS+G T++DI+EVTIRRSKLAKWLMEP+FEEL
Sbjct: 241 SDSRSHSEDEASTGDGGMADSDEDRE-PGSEGLTYDDIREVTIRRSKLAKWLMEPWFEEL 300
Query: 301 IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARW 360
IVGCFVRVGIGRS+SGPIYRLCLVRNVDA +PDR YKLENK T+KYLNVIWGNE+SAARW
Sbjct: 301 IVGCFVRVGIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAARW 360
Query: 361 QMAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQ 420
QMAMVSDSAP EDEYKQWV+EVER+GGRM +KQDILEKKEAI+K N FVYSAATVKQMLQ
Sbjct: 361 QMAMVSDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIKKSNTFVYSAATVKQMLQ 420
Query: 421 DKKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIR 480
+KKSAS RPLN+AAEKDRLRRE++VA K D+AEVERI+ R+Q+LEASR+ Q KDAKAIR
Sbjct: 421 EKKSASTRPLNVAAEKDRLRRELEVAQMKQDDAEVERIRARIQELEASRQAQEKDAKAIR 480
Query: 481 LAEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEA 540
LAEMNRKNR ENF+NASEL+P+ LKAGEAGYDPFSRRWTRSRNYYVS G A+ AAEA
Sbjct: 481 LAEMNRKNRAENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPGGADVAAEA 540
Query: 541 AGNSDNVTPALENTRTEAGGT-SDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLH 600
++N T A+ ++ A GT ++AGMAATAAALEAAA AGKLVDT APVD GTESN+LH
Sbjct: 541 ---NNNGTAAVAHSNGAATGTLAEAGMAATAAALEAAADAGKLVDTAAPVDQGTESNTLH 600
Query: 601 NFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRR 660
+F+LPISL L+KFGGA GA+AGF+ARKQ+IEATVG +VPENDGRRHALTLTVSDYKRRR
Sbjct: 601 DFDLPISLTALEKFGGAKGAKAGFMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRR 658
BLAST of Cucsa.201430 vs. NCBI nr
Match:
gi|590624747|ref|XP_007025691.1| (PAF1 complex component isoform 1 [Theobroma cacao])
HSP 1 Score: 1003.0 bits (2592), Expect = 2.4e-289
Identity = 509/662 (76.89%), Postives = 574/662 (86.71%), Query Frame = 1
Query: 1 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
MADLENLLLEAAGRT GRNRHS PPSRR+REGSYSD GSDSRDDDSDDD GYASRKPS
Sbjct: 1 MADLENLLLEAAGRTGTGGRNRHSLPPSRRRREGSYSDGGSDSRDDDSDDDHGYASRKPS 60
Query: 61 GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
GSQVPLKKRLDP ERDDD GSQEEG+ +D S EGDSSDESDVGDDLYK++DDRRKLA
Sbjct: 61 GSQVPLKKRLDPAERDDDQGSQEEGDYDDGVSVHEGDSSDESDVGDDLYKNEDDRRKLAQ 120
Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSR-IRSSARSADR 180
M+EL+RE+ILS+RA K+ DK E +R+K + + + SRKETPPLPSSR +RSSARSADR
Sbjct: 121 MTELERELILSERADKRGDKKFTEKIRSKRENDRPSRSRKETPPLPSSRGVRSSARSADR 180
Query: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSE 240
AAAKDDALNELRAKRLKQQDPEAHRKLRDASRG++ SR SP KRKPFTA SLSSSSQS+
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGSRGLSPVKRKPFTASSLSSSSQSD 240
Query: 241 SESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEEL 300
SESR S+DEGSTGDGGM+DSDD+R + G DGPTF+DIKE+TIRRSKLAKW MEPFFEEL
Sbjct: 241 SESRSNSEDEGSTGDGGMVDSDDDRGMQGPDGPTFDDIKEITIRRSKLAKWFMEPFFEEL 300
Query: 301 IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARW 360
IVGC+VRVGIGRS+SGPIYRLC+VRNVDATEP+R YKLENK T+KYLNV+WGNE+SAARW
Sbjct: 301 IVGCYVRVGIGRSKSGPIYRLCMVRNVDATEPERTYKLENKTTYKYLNVVWGNESSAARW 360
Query: 361 QMAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQ 420
QMAM+SDS P E+E++Q ++E+ER+GGRM SKQD+LEKKEA+QK FVYSAATVKQMLQ
Sbjct: 361 QMAMISDSPPQEEEFRQLIRELERSGGRMPSKQDVLEKKEALQKAKTFVYSAATVKQMLQ 420
Query: 421 DKKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIR 480
+KKS S+RPLNIAAEKDRLRR++++A SK+DEAEVERIK RLQQLEASR+ Q KDAKA+R
Sbjct: 421 EKKSTSSRPLNIAAEKDRLRRDLEIAQSKHDEAEVERIKMRLQQLEASRQAQEKDAKAVR 480
Query: 481 LAEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEA 540
LAEMNRKNR ENFKNASEL+P+ LKAGEAGYDPFSRRWTRSRNYYV+ A+ AA A
Sbjct: 481 LAEMNRKNRAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVAKPPGADAAAVA 540
Query: 541 AGNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHN 600
N D + +A ++AG AAT AAL+ AAGAGKLVDT+APVD GTESN LH+
Sbjct: 541 --NGDRIGVIASGNGNDARAAAEAGRAATVAALQEAAGAGKLVDTSAPVDEGTESNMLHD 600
Query: 601 FELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRG 660
FE+PISL LQ+FGG GA AGF+ARKQRIEATVG QVPENDGRRHALTLTVSDYKRRRG
Sbjct: 601 FEIPISLNALQRFGGPQGAVAGFMARKQRIEATVGCQVPENDGRRHALTLTVSDYKRRRG 660
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
VIP5_ARATH | 3.2e-254 | 70.29 | Protein RTF1 homolog OS=Arabidopsis thaliana GN=VIP5 PE=1 SV=1 | [more] |
RTF1_HUMAN | 4.0e-39 | 25.19 | RNA polymerase-associated protein RTF1 homolog OS=Homo sapiens GN=RTF1 PE=1 SV=4 | [more] |
RTF1_MOUSE | 2.6e-38 | 24.89 | RNA polymerase-associated protein RTF1 homolog OS=Mus musculus GN=Rtf1 PE=1 SV=1 | [more] |
RTF1_PONAB | 9.3e-36 | 25.16 | RNA polymerase-associated protein RTF1 homolog (Fragment) OS=Pongo abelii GN=RTF... | [more] |
RTF1_CAEEL | 2.8e-32 | 24.91 | RNA polymerase-associated protein RTF1 homolog OS=Caenorhabditis elegans GN=rtfo... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KXW1_CUCSA | 0.0e+00 | 100.00 | Uncharacterized protein OS=Cucumis sativus GN=Csa_4G038650 PE=4 SV=1 | [more] |
W9RDA9_9ROSA | 4.2e-293 | 79.46 | RNA polymerase-associated protein RTF1-like protein OS=Morus notabilis GN=L484_0... | [more] |
A0A067JDU6_JATCU | 5.1e-291 | 78.73 | Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21409 PE=4 SV=1 | [more] |
A0A061GFX4_THECC | 1.6e-289 | 76.89 | PAF1 complex component isoform 1 OS=Theobroma cacao GN=TCM_029914 PE=4 SV=1 | [more] |
B9RZ59_RICCO | 1.4e-288 | 77.34 | RNA polymerase-associated protein RTF1, putative OS=Ricinus communis GN=RCOM_093... | [more] |
Match Name | E-value | Identity | Description | |
AT1G61040.1 | 1.8e-255 | 70.29 | plus-3 domain-containing protein | [more] |