Cp4.1LG01g09470 (gene) Cucurbita pepo (Zucchini)

BLAST of Cp4.1LG01g09470 vs. Swiss-Prot
Match: VIP5_ARATH (Protein RTF1 homolog OS=Arabidopsis thaliana GN=VIP5 PE=1 SV=1)

HSP 1 Score: 805.1 bits (2078), Expect = 5.9e-232
Identity = 460/664 (69.28%), Postives = 540/664 (81.33%), Query Frame = 1

Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           M DLENLLLEAAGRTN+AGR+RH  PPS R+REGSYSD  SDSRDD SD+DRGYASRKPS
Sbjct: 1   MGDLENLLLEAAGRTNSAGRSRH--PPSSRRREGSYSDGSSDSRDD-SDEDRGYASRKPS 60

Query: 61  GSQVPLKKRLDPAERDDDAGSQEEGDNEDVGSDREGDSSNESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRL+ AER+D A ++ EG   D  SDREGDSS ESD GDDLYK+++DR+KLAG
Sbjct: 61  GSQVPLKKRLE-AEREDRA-ARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAG 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKKDKGKTAPSRKETSPLPSSR-IRSSARSADR 180
           M+E QREMILS+RA KK DK+  E LR+K++  KT  S+KET PLP+SR +RSSARSADR
Sbjct: 121 MTEFQREMILSERADKKGDKNFTEKLRSKRESEKTPVSKKETQPLPASRGVRSSARSADR 180

Query: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANNRRFSPTKRKPFTAPSLSSSSESE 240
           AAAKDDALNELRAKR+KQQDP A RKLRDAS+G + +R FS TKRKP  + +LSSSS+S+
Sbjct: 181 AAAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSTKRKPLASSNLSSSSQSD 240

Query: 241 SRFQSEDEESTGDGGMIDSDDERSMSGLKGPTFEDIKEITIRRSKLAKWLMEPFFEELIV 300
           S  +S+ ++   +GGM+DSDD+RS      PTFED+KE+TIRRSKLAKWLMEPFFEELIV
Sbjct: 241 SDSRSQSDDEGSNGGMLDSDDDRS----DVPTFEDVKEVTIRRSKLAKWLMEPFFEELIV 300

Query: 301 GCFVRVGIGRSRSGSIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQM 360
           GCFVRVGIGRS+SG IYRLC V+NVDAT+PD+ YKLENK THKYLNV+WGNE+SAARWQM
Sbjct: 301 GCFVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARWQM 360

Query: 361 AMISDSAPLEDEYKQWLKEVERTNGRMLSKQDVLEKKEAIQKANNFVYSAATVKQMLREK 420
           AMISD  PLE+EY+QW++EVERTNGRM +KQD+ EKKEAIQ+ N+FVYSA TVKQML+EK
Sbjct: 361 AMISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRTNSFVYSAETVKQMLQEK 420

Query: 421 KSASSRPLNIAAEKDRLRREMDVALSKNDESEVERIKARLQQLEASRRLQMKDTKAIRLV 480
           KSAS RP+N+AAEKDRLR+E+++A SKNDE+ VERIK++++QL+ASR  +  D KA++L 
Sbjct: 421 KSASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKSKIKQLDASRNKKGVDKKALKLA 480

Query: 481 EMNRKNRVENFKNASELRPL-KDLKAGEAGYDPFSRRWTRSRNYY----VGNAGEANGAA 540
           EMN+KNR ENFKNASE++ +   LKAGEAGYDPFSRRWTRS NYY     G  GE N AA
Sbjct: 481 EMNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYYNGKNKGKDGEENEAA 540

Query: 541 EAGGNSDNAMPASETNRTGSGRTAEAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSL 600
            A         A ETN    G  A AG+ AT AALEAAA AGKL+DT AP+  G E N L
Sbjct: 541 VAA--------AVETN----GADAGAGVEATEAALEAAAEAGKLIDTRAPIGQGAEHNQL 600

Query: 601 HNFELPISLAVLQKFGGPMGAQAGFLARKQQIEATVGRQVPENDGRRHALTLTVSDYKRR 659
           HNFEL +SL  LQK+GGP G Q  F+ARKQ  EATVG +V ENDG+RH LTLTVSDYKRR
Sbjct: 601 HNFELSLSLTALQKYGGPQGVQKAFMARKQLTEATVGCRVAENDGKRHGLTLTVSDYKRR 643

BLAST of Cp4.1LG01g09470 vs. Swiss-Prot
Match: RTF1_HUMAN (RNA polymerase-associated protein RTF1 homolog OS=Homo sapiens GN=RTF1 PE=1 SV=4)

HSP 1 Score: 97.1 bits (240), Expect = 7.9e-19
Identity = 161/661 (24.36%), Postives = 282/661 (42.66%), Query Frame = 1

Query: 15  TNAAGRNRHSHPPSRRQREGSYS-DAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPA 74
           T  + +N+      + +++G+    A   +    SD D    S  P   +V         
Sbjct: 105 TFGSNKNKKKGKARKIEKKGTMKKQANKTASSGSSDKDSSAESSAPEEGEVS-------- 164

Query: 75  ERDDDAGSQEEGDNEDVGSDREGDSSNESDVGDDLYKDDDDRRKLAGMSELQREMILSDR 134
             D D+ S     + D  S+   D       G+DL  D++DR +L  M+E +RE  L +R
Sbjct: 165 --DSDSNSSSSSSDSDSSSE---DEEFHDGYGEDLMGDEEDRARLEQMTEKEREQELFNR 224

Query: 135 ASK----KNDKHLYESLRAKKDKGKTAPSRKETSPLPSSRIRSSARSADRAAAKDDALNE 194
             K    K    + + L+  K K K    +K+       ++     S   +  K     E
Sbjct: 225 IEKREVLKRRFEIKKKLKTAKKKEKKEKKKKQEEEQEKKKLTQIQESQVTSHNK-----E 284

Query: 195 LRAKRLKQQDP--EAHRKLRDASRGNANNRRFSPTKRKPFTAPSLSSSSESESRFQSEDE 254
            R+KR ++ D   +A  +L+       N       K++P     + S  E E       E
Sbjct: 285 RRSKRDEKLDKKSQAMEELKAEREKRKNRTAELLAKKQPLKTSEVYSDDEEEEEDDKSSE 344

Query: 255 ESTGDGGMIDSDDERSMSGLKGPTF-----EDIKEITIRRSKLAKWLMEPFFEELIVGCF 314
           +S        SD+E     +   +      E++  + + R KL +W   PFF + + GCF
Sbjct: 345 KSDRSSRTSSSDEEEEKEEIPPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCF 404

Query: 315 VRVGIGRSRSGSIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQMAMI 374
           VR+GIG   S  +YR+  +  V   E  + Y+L    T+K L +  GN+    R  +  +
Sbjct: 405 VRIGIGNHNSKPVYRVAEITGV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFV 464

Query: 375 SDSAPLEDEYKQWLKEVERTNGRMLSKQDVLEKKE-AIQKANNFVYSAATVKQMLREKKS 434
           S+    E E+ +W KE   + G  L   D + KKE +I++A N+ ++   ++++++EK+ 
Sbjct: 465 SNQEFTESEFMKW-KEAMFSAGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKER 524

Query: 435 ASSRPLNIAAEKDRLRREMDVALSKNDESEVERIKARLQQL-EASRRLQMKDTKAIRLVE 494
               P N A +K +L +E  +A    D+ + ++I+ +L +L E +  L  + TK I  + 
Sbjct: 525 FRKAPPNYAMKKTQLLKEKAMAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAIS 584

Query: 495 -MNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVGNAGEANGAAEAGGN 554
            +N++NR  N   + +    +         DPF+RR  + +   V N+ +   A +A   
Sbjct: 585 YINQRNREWNIVESEKALVAESHNMKNQQMDPFTRR--QCKPTIVSNSRDP--AVQA--- 644

Query: 555 SDNAMPASETNRTGSGRTAEAGMAATAAALEAAAGAGKLVDTN--APVDGGTESNSLHNF 614
              A+ A    + GSG   +       A  E + G GK  D N  +  D   +   +H+F
Sbjct: 645 ---AILAQLNAKYGSGVLPD-------APKEMSKGQGKDKDLNSKSASDLSEDLFKVHDF 704

Query: 615 ELPISLAVLQKFGGPMGAQAGFLARKQQIEATVGRQVPENDGRRHALTLTVSDYKRRRGL 659
           ++ I L V               + + +  A   +  P  DG     +L + DYK+RRGL
Sbjct: 705 DVKIDLQV--------------PSSESKALAITSKAPPAKDGAPRR-SLNLEDYKKRRGL 710

BLAST of Cp4.1LG01g09470 vs. Swiss-Prot
Match: RTF1_MOUSE (RNA polymerase-associated protein RTF1 homolog OS=Mus musculus GN=Rtf1 PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.3e-18
Identity = 174/693 (25.11%), Postives = 300/693 (43.29%), Query Frame = 1

Query: 3   DLENLLLEAAGRTNAAGRNRH---SHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKP 62
           +L+  LL  A R  +    +    S P +    E S SD   D     S+ ++     + 
Sbjct: 68  NLDQELLSLAKRKRSDSEEKEPPVSQPAASSDSETSDSD---DEWTFGSNKNKKKGKTRK 127

Query: 63  SGSQVPLKKRLDPA------ERDDDAGSQ--EEGDNEDV-----GSDREGDSSNESD--- 122
              +  +KK+ + A      +RD  A S   EEG+  D       S  + DSS+E +   
Sbjct: 128 VEKKGAMKKQANKAASSGSSDRDSSAESSAPEEGEVSDSESSSSSSSSDSDSSSEDEEFH 187

Query: 123 --VGDDLYKDDDDRRKLAGMSELQREMILSDRASK----KNDKHLYESLRAKKDKGKTAP 182
              G+DL  D++DR +L  M+E +RE  L +R  K    K    + + L+  K K K   
Sbjct: 188 DGYGEDLMGDEEDRARLEQMTEKEREQELFNRIEKREVLKRRFEIKKKLKTAKKKEKKEK 247

Query: 183 SRKETSPLPSSRIRSSARSADRAAAKDDALNELRAKRLKQQDP--EAHRKLRDASRGNAN 242
            +K+       ++     S   +  K     E R+KR ++ D   +A  +L+       N
Sbjct: 248 KKKQEEEQEKKKLTQIQESQVTSHNK-----ERRSKRDEKLDKKSQAMEELKAEREKRKN 307

Query: 243 NRRFSPTKRKPFTAPSLSSSSESESRFQSEDEESTGDGGMIDSDDERSMSGLKGPTF--- 302
                  K++P     + S  E E       E+S        SD+E     +   +    
Sbjct: 308 RTAELLAKKQPLKTSEVYSDDEEEEDDDKSSEKSDRSSRTSSSDEEEEKEEIPPKSQPVS 367

Query: 303 --EDIKEITIRRSKLAKWLMEPFFEELIVGCFVRVGIGRSRSGSIYRLCLVRNVDATEPD 362
             E++  + + R KL +W   PFF + + GCFVR+GIG   S  +YR+  +  V   E  
Sbjct: 368 LPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEITGV--VETA 427

Query: 363 RQYKLENKITHKYLNVIWGNESSAARWQMAMISDSAPLEDEYKQWLKEVERTNGRMLSKQ 422
           + Y+L    T+K L +  GN+    R  +  +S+    E E+ +W KE   + G  L   
Sbjct: 428 KVYQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKW-KEAMFSAGMQLPTL 487

Query: 423 DVLEKKE-AIQKANNFVYSAATVKQMLREKKSASSRPLNIAAEKDRLRREMDVALSKNDE 482
           D + KKE +I++A N+ ++   ++++++EK+     P N A +K +L +E  +A    D+
Sbjct: 488 DEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAMAEDLGDQ 547

Query: 483 SEVERIKARLQQL-EASRRLQMKDTKAIRLVE-MNRKNRVENFKNASELRPLKDLKAGEA 542
            + ++I+ +L +L E +  L  + TK I  +  +N++NR  N   + +    +       
Sbjct: 548 DKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVAESHNMRNQ 607

Query: 543 GYDPFSRRWTRSRNYYVGNAGEANGAAEAGGNSDNAMPASETNRTGSGRTAEAGMAATAA 602
             DPF+RR  + +   V N+ +   A +A      A+ A    + GSG   +       A
Sbjct: 608 QMDPFTRR--QCKPTIVSNSRDP--AVQA------AILAQLNAKYGSGVLPD-------A 667

Query: 603 ALEAAAGAGKLVDTNAPV--DGGTESNSLHNFELPISLAVLQKFGGPMGAQAGFLARKQQ 659
             E + G GK  D N+    D   +   +H+F++ I L V               + + +
Sbjct: 668 PKEMSKGQGKDKDLNSKTASDLSEDLFKVHDFDVKIDLQV--------------PSSESK 715

BLAST of Cp4.1LG01g09470 vs. Swiss-Prot
Match: RTF1_PONAB (RNA polymerase-associated protein RTF1 homolog (Fragment) OS=Pongo abelii GN=RTF1 PE=2 SV=2)

HSP 1 Score: 87.4 bits (215), Expect = 6.2e-16
Identity = 151/607 (24.88%), Postives = 264/607 (43.49%), Query Frame = 1

Query: 15  TNAAGRNRHSHPPSRRQREGSYS-DAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPA 74
           T  + +N+      + +++G+    A   +    SD D    S  P   +V         
Sbjct: 100 TFGSNKNKKKGKARKIEKKGTMKKQANKTASSGSSDKDSSAESSAPEEGEVS-------- 159

Query: 75  ERDDDAGSQEEGDNEDVGSDREGDSSNESDVGDDLYKDDDDRRKLAGMSELQREMILSDR 134
             D D+ S     + D  S+   D       G+DL  D++DR +L  M+E +RE  L +R
Sbjct: 160 --DSDSNSSSSSSDSDSSSE---DEEFHDGYGEDLMGDEEDRARLEQMTEKEREQELFNR 219

Query: 135 ASK----KNDKHLYESLRAKKDKGKTAPSRKETSPLPSSRIRSSARSADRAAAKDDALNE 194
             K    K    + + L+  K K K    +K+       ++     S   +  K     E
Sbjct: 220 IEKREVLKRRFEIKKKLKTAKKKEKKEKKKKQEEEQEKKKLTQIQESQVTSHNK-----E 279

Query: 195 LRAKRLKQQDP--EAHRKLRDASRGNANNRRFSP-TKRKPFTAPSLSSSSESESRFQSED 254
            R+KR ++ D   +A  +L+ A R    NR      K++P     + S  E E       
Sbjct: 280 RRSKRDEKLDKKSQAMEELK-AEREKRKNRTVELLAKKQPLKTSEVYSDDEEEEEDDKSS 339

Query: 255 EESTGDGGMIDSDDERSMSGLKGPTF-----EDIKEITIRRSKLAKWLMEPFFEELIVGC 314
           E+S        SD+E     +   +      E++  + + R KL +W   PFF + + GC
Sbjct: 340 EKSDRSSRTSSSDEEEEKEEIPPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGC 399

Query: 315 FVRVGIGRSRSGSIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQMAM 374
           FVR+GIG   S  +YR+  +  V   E  + Y+L    T+K L +  GN+    R  +  
Sbjct: 400 FVRIGIGNHNSKPVYRVAEITGV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEF 459

Query: 375 ISDSAPLEDEYKQWLKEVERTNGRMLSKQDVLEKKE-AIQKANNFVYSAATVKQMLREKK 434
           +S+    E E+ +W KE   + G  L   D + KKE +I++A N+ ++   ++++++EK+
Sbjct: 460 VSNQEFTESEFMKW-KEAMFSAGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKE 519

Query: 435 SASSRPLNIAAEKDRLRREMDVALSKNDESEVERIKARLQQL-EASRRLQMKDTKAIRLV 494
                P N A +K +L +E  +A    D+ + ++I+ +L +L E +  L  + TK I  +
Sbjct: 520 RFRKAPPNYAMKKTQLLKEKAMAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI 579

Query: 495 E-MNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVGNAGEANGAAEAGG 554
             +N++NR  N   + +    +         DPF+RR  + +   V N+ +   A +A  
Sbjct: 580 SYINQRNREWNIVESEKALVAESHNMKNQQMDPFTRR--QCKPTIVSNSRDP--AVQA-- 639

Query: 555 NSDNAMPASETNRTGSGRTAEAGMAATAAALEAAAGAGKLVDTN--APVDGGTESNSLHN 604
               A+ A    + GSG   +       A  E + G GK  D N  +  D   +   +H+
Sbjct: 640 ----AILAQLNAKYGSGVLPD-------APKEMSKGQGKDKDLNSKSASDLSEDLFKVHD 665

BLAST of Cp4.1LG01g09470 vs. Swiss-Prot
Match: RTF1_CAEEL (RNA polymerase-associated protein RTF1 homolog OS=Caenorhabditis elegans GN=rtfo-1 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 2.0e-14
Identity = 145/592 (24.49%), Postives = 262/592 (44.26%), Query Frame = 1

Query: 45  DDDSDDDRGYASRKPSGSQVPLKKRLDPAERDDDAGSQEEGDNEDVG----SDREGDSSN 104
           D DSD D G    KP  +        D +  D DA   +    +         R   SS+
Sbjct: 22  DSDSDSDAGPKPGKPLST--------DSSASDSDAEKPQAKPAKKKTLTKRKRRATGSSD 81

Query: 105 ESDVGDDLYKDDDDRRKLAGMSELQREMILSDRASKKNDKHLYESL------RAKK--DK 164
           +  V DDL+ D +D+ +   ++EL++E  + +R   + +    E +      +AKK  +K
Sbjct: 82  DDQVDDDLFADKEDKARWKKLTELEKEQEIFERMEARENAIAREEIAQQLAKKAKKSSEK 141

Query: 165 G-KTAPSRKETSPLPSSRIRSSARSADRAAAKDDALNELRAKRLKQQDPEA----HRKLR 224
           G KT   RK  S    +       S+D  +  D A +       K ++  A      K +
Sbjct: 142 GVKTEKRRKMNSGGSDAGSPKRKASSDSDSEMDAAFHRPSDINRKHKEKNAMDALKNKRK 201

Query: 225 DASRGNANNRRFSPTKRKPFTAPSLSSSSESESRFQSEDEESTGDGGMIDSDD--ERSMS 284
           +  + NA N   S        + S SSSS SES   S     +    + + D   ++ + 
Sbjct: 202 EIEKKNAKNEALSIDAVFGANSGSSSSSSSSESSRSSSSSRESSPERVSEKDKIVKKDVD 261

Query: 285 GLKGPTFEDIKEITIRRSKLAKWLMEPFFEELIVGCFVRVGIGR-SRSGSIYRLCLVRNV 344
           GL      +++   + R KL+  +  PFF+  +VGC+VR+G G+ S SGS YR+  +  V
Sbjct: 262 GLS-----ELRRARLSRHKLSLMIHAPFFDSTVVGCYVRLGQGQMSGSGSKYRIWKIVGV 321

Query: 345 DATEPDRQYKLENKITHKYLNVIWGNESSAARWQMAMISDSAPLEDEYKQWLKEVERTNG 404
           +  E ++ Y+LE K T+K +     N  S   ++M  +S++   + E+ +WL   +R +G
Sbjct: 322 E--ESNKVYELEGKKTNKIIKC--QNGGSERPFRMQFVSNADFEQIEFDEWLLACKR-HG 381

Query: 405 RMLSKQDVLEKKEAIQKANNFVYSAATVKQMLREKKSASSRPLNIAAEKDRLRREMDVAL 464
            + +   + +KK+ I+KA N  YS   V  M++EK    + P N A  K    ++ ++A 
Sbjct: 382 NLPTVDIMDKKKQDIEKAINHKYSDKEVDLMIKEKSKYQTVPRNFAMTKANWSKQKELAQ 441

Query: 465 SKNDESEVERIKARLQQLEAS----RRLQMKDTKAIRLVEMNRKNRVENFKNASELRPLK 524
            + D  E E+I+ ++ ++E       + + K   AI  +    ++++++   + +L+  +
Sbjct: 442 QRGDIREAEQIQTKIDEIERQADELEKERSKSISAIAFINHRNRSKIKDQVLSGQLKIEE 501

Query: 525 DLKAGEAGYDPFSRRWTRSRNYYVGNAGEANGAAEAGGNSDNAMPASETNRTGSGRTAEA 584
           + +      DPF+R+    R    G+    +G   A         +S TN +  G+   +
Sbjct: 502 NSQD-----DPFTRKKGGMR-VVSGSKSRLDGTLSAS--------SSTTNLSDGGKDKSS 561

Query: 585 GMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFELPISLAVLQKFGGP 613
            +A                  +  +   T+ +SLH+F+L I L  L+ F  P
Sbjct: 562 SLAKPTQP-----------PPSTQIKKKTDISSLHDFDLDIDLGKLKDFSTP 570

BLAST of Cp4.1LG01g09470 vs. TrEMBL
Match: A0A0A0KXW1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G038650 PE=4 SV=1)

HSP 1 Score: 1133.6 bits (2931), Expect = 0.0e+00
Identity = 610/660 (92.42%), Postives = 634/660 (96.06%), Query Frame = 1

Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS
Sbjct: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60

Query: 61  GSQVPLKKRLDPAERDDDAGSQEEGDNEDVGSDREGDSSNESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDP ERDDD GSQEEG++EDVGS+REGDSS+ESDVGDDLYKDDDDRRKLAG
Sbjct: 61  GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKKDKGKTAPSRKETSPLPSSRIRSSARSADRA 180
           MSELQREMILSDRASKKNDKHLYESLRAK DKGK+APSRKET PLPSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180

Query: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANNRRFSPTKRKPFTAPSLSSSS--ES 240
           AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNAN+RRFSPTKRKPFTAPSLSSSS  ES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240

Query: 241 ESRFQSEDEESTGDGGMIDSDDERSMSGLKGPTFEDIKEITIRRSKLAKWLMEPFFEELI 300
           ESRFQS+DE STGDGGMIDSDDERS+ G  GPTFEDIKE+TIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300

Query: 301 VGCFVRVGIGRSRSGSIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 360
           VGCFVRVGIGRSRSG IYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNE+SAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360

Query: 361 MAMISDSAPLEDEYKQWLKEVERTNGRMLSKQDVLEKKEAIQKANNFVYSAATVKQMLRE 420
           MAM+SDSAPLEDEYKQW+KEVERT GRMLSKQD+LEKKEAIQK NNFVYSAATVKQML++
Sbjct: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420

Query: 421 KKSASSRPLNIAAEKDRLRREMDVALSKNDESEVERIKARLQQLEASRRLQMKDTKAIRL 480
           KKSAS+RPLNIAAEKDRLRREMDVA+SKNDE+EVERIK RLQQLEASRRLQMKD KAIRL
Sbjct: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480

Query: 481 VEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVGNAGEANGAAEAGG 540
            EMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYV NAGEANGAAEA G
Sbjct: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540

Query: 541 NSDNAMPASETNRTGSGRTAEAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600
           NSDN  PA E  RT +G T++AGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE
Sbjct: 541 NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600

Query: 601 LPISLAVLQKFGGPMGAQAGFLARKQQIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 659
           LPISLA+LQKFGG +GAQAGFLARKQ+IEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660

BLAST of Cp4.1LG01g09470 vs. TrEMBL
Match: A0A067JDU6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21409 PE=4 SV=1)

HSP 1 Score: 924.9 bits (2389), Expect = 5.6e-266
Identity = 511/661 (77.31%), Postives = 579/661 (87.59%), Query Frame = 1

Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           MADLENLLLEAAGRT ++GRNR++HPPSRR+REGSYSD GSDSRD+DSDDDRGYASRKPS
Sbjct: 1   MADLENLLLEAAGRTGSSGRNRNAHPPSRRRREGSYSDGGSDSRDEDSDDDRGYASRKPS 60

Query: 61  GSQVPLKKRLDPAERDDDAGSQEEGDNEDVGSDREGDSSNESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDPAERDDD GSQEEG  +D  SDREGDSS+ESDVGDDLYKD+DDRRKLA 
Sbjct: 61  GSQVPLKKRLDPAERDDDQGSQEEGGYDDGASDREGDSSDESDVGDDLYKDEDDRRKLAQ 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKKDKGKTAPSRKETSPLPSSR-IRSSARSADR 180
           MSEL+REMILS+RA KK DK+L E +R+K+D  +   SRKET PLPSSR +R+SARSADR
Sbjct: 121 MSELEREMILSERADKKGDKNLTERIRSKRDSERATRSRKETPPLPSSRGVRTSARSADR 180

Query: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANNRRFSPTKRKPFTAPSL-SSSSES 240
           AAAKDDALNELRAKRLKQQDPEAHRKLRD SRG + +R  SP +RK FT+ SL SSSSES
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDVSRGTSGSRGVSPVRRKRFTSASLSSSSSES 240

Query: 241 ESRFQSEDEESTGDGGMIDSDDERSMSGLKGPTFEDIKEITIRRSKLAKWLMEPFFEELI 300
           +SR  SEDE STGDGGM DSD++R   G +G T++DI+E+TIRRSKLAKWLMEP+FEELI
Sbjct: 241 DSRSHSEDEASTGDGGMADSDEDRE-PGSEGLTYDDIREVTIRRSKLAKWLMEPWFEELI 300

Query: 301 VGCFVRVGIGRSRSGSIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 360
           VGCFVRVGIGRS+SG IYRLCLVRNVDA +PDR YKLENK T+KYLNVIWGNESSAARWQ
Sbjct: 301 VGCFVRVGIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAARWQ 360

Query: 361 MAMISDSAPLEDEYKQWLKEVERTNGRMLSKQDVLEKKEAIQKANNFVYSAATVKQMLRE 420
           MAM+SDSAP EDEYKQW++EVER+ GRM +KQD+LEKKEAI+K+N FVYSAATVKQML+E
Sbjct: 361 MAMVSDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIKKSNTFVYSAATVKQMLQE 420

Query: 421 KKSASSRPLNIAAEKDRLRREMDVALSKNDESEVERIKARLQQLEASRRLQMKDTKAIRL 480
           KKSAS+RPLN+AAEKDRLRRE++VA  K D++EVERI+AR+Q+LEASR+ Q KD KAIRL
Sbjct: 421 KKSASTRPLNVAAEKDRLRRELEVAQMKQDDAEVERIRARIQELEASRQAQEKDAKAIRL 480

Query: 481 VEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVGNAGEANGAAEAG 540
            EMNRKNR ENF+NASEL+P+   LKAGEAGYDPFSRRWTRSRNYYV   G A+ AAEA 
Sbjct: 481 AEMNRKNRAENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPGGADVAAEAN 540

Query: 541 GNSDNAMPASETNRTGSGRTAEAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNF 600
            N   A+  + +N   +G  AEAGMAATAAALEAAA AGKLVDT APVD GTESN+LH+F
Sbjct: 541 NNGTAAV--AHSNGAATGTLAEAGMAATAAALEAAADAGKLVDTAAPVDQGTESNTLHDF 600

Query: 601 ELPISLAVLQKFGGPMGAQAGFLARKQQIEATVGRQVPENDGRRHALTLTVSDYKRRRGL 659
           +LPISL  L+KFGG  GA+AGF+ARKQQIEATVG +VPENDGRRHALTLTVSDYKRRRGL
Sbjct: 601 DLPISLTALEKFGGAKGAKAGFMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRRGL 658

BLAST of Cp4.1LG01g09470 vs. TrEMBL
Match: W9RDA9_9ROSA (RNA polymerase-associated protein RTF1-like protein OS=Morus notabilis GN=L484_012115 PE=4 SV=1)

HSP 1 Score: 919.5 bits (2375), Expect = 2.4e-264
Identity = 515/662 (77.79%), Postives = 570/662 (86.10%), Query Frame = 1

Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           MA+LENLLLEAAGRT +AGRNRHS PPSRR+REGSYSD GSDSRDDDSDDDRGYA+RKPS
Sbjct: 1   MAELENLLLEAAGRTRSAGRNRHSIPPSRRRREGSYSDGGSDSRDDDSDDDRGYANRKPS 60

Query: 61  GSQVPLKKRLDPAERDDDAGSQEEGDNEDVGSDREGDSSNESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDP E DDD GS+EEGD +D GSDREGDS  ESDVG DLYKDDDDRRKLA 
Sbjct: 61  GSQVPLKKRLDPTEMDDDQGSEEEGD-DDRGSDREGDS--ESDVGSDLYKDDDDRRKLAE 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKKD-KGKTAPSRKETSPLPSSRIRSSARSADR 180
           M+ELQREMIL DRASKK DK+L E LR K D KGK   SRKET PLPSSR+RSSARSADR
Sbjct: 121 MTELQREMILLDRASKKEDKNLKEKLRPKWDNKGKATQSRKET-PLPSSRVRSSARSADR 180

Query: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANNRRFSPTKRKPFTAPSLSSSSES- 240
           AAAKDDALNELRAKRLKQQDPEAH KLRDASRG + +R     KRK +TA SLSSSS+S 
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHGKLRDASRGGSGSRNLLHNKRKSYTATSLSSSSQSD 240

Query: 241 -ESRFQSEDEESTGDGGMIDSDDERSMSGLKGPTFEDIKEITIRRSKLAKWLMEPFFEEL 300
            ES  QSEDE STGDGGMIDSDDER + G +G TF+DIKE+T+RRSKLAKWLMEPFFEEL
Sbjct: 241 SESESQSEDEGSTGDGGMIDSDDERGIPGSEGLTFDDIKEVTVRRSKLAKWLMEPFFEEL 300

Query: 301 IVGCFVRVGIGRSRSGSIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARW 360
           IVGCFVRVGIGRS+SG IYRLC+VRNVDA+EPDRQYKL+NKITHKYLNV+WGNE+SAARW
Sbjct: 301 IVGCFVRVGIGRSKSGPIYRLCMVRNVDASEPDRQYKLDNKITHKYLNVVWGNENSAARW 360

Query: 361 QMAMISDSAPLEDEYKQWLKEVERTNGRMLSKQDVLEKKEAIQKANNFVYSAATVKQMLR 420
           QMAM+SDS P E+E+KQW++EVER+ GRM +K D+L+KKE+I+K N FVYSAATVKQML+
Sbjct: 361 QMAMVSDSVPNEEEFKQWVREVERSGGRMPTKHDILDKKESIKKINTFVYSAATVKQMLQ 420

Query: 421 EKKSASSRPLNIAAEKDRLRREMDVALSKNDESEVERIKARLQQLEASRRLQMKDTKAIR 480
           EKKSAS+RPLNIA EKDRLRRE++VA SKNDE EV+RIK RLQ+LEASR+ +  D KAIR
Sbjct: 421 EKKSASARPLNIALEKDRLRRELEVAQSKNDEVEVDRIKTRLQELEASRKAKQTDAKAIR 480

Query: 481 LVEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVGNAGEANGAAEA 540
           L EMNRKNRVENFKNASEL+P+   LKAGEAGYDPFSRRWTRSRNYYVG  GE    + A
Sbjct: 481 LAEMNRKNRVENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVGKPGEVKEDSGA 540

Query: 541 GGNSDNAMPASETNRTGSGRTAEAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHN 600
              ++ A   +E N       AEAG+AAT AALEAAA AGKLVDTNAPVD GT SN LHN
Sbjct: 541 NAGNNGASTDAENNGRHGIVAAEAGIAATEAALEAAADAGKLVDTNAPVDQGTVSNMLHN 600

Query: 601 FELPISLAVLQKFGGPMGAQAGFLARKQQIEATVGRQVPENDGRRHALTLTVSDYKRRRG 659
           FELPISL+VLQKFGGP GAQAGF+ARKQ+IEATVG +VPENDGRRHALTL+V DYKRRRG
Sbjct: 601 FELPISLSVLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLSVGDYKRRRG 658

BLAST of Cp4.1LG01g09470 vs. TrEMBL
Match: A0A0D2T1B1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G025800 PE=4 SV=1)

HSP 1 Score: 918.3 bits (2372), Expect = 5.3e-264
Identity = 508/661 (76.85%), Postives = 572/661 (86.54%), Query Frame = 1

Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           MADLENLLLEAAGRT   GRNRHS PPSRR+REGSYSD GSDSRDDDSDDD GYASRKPS
Sbjct: 1   MADLENLLLEAAGRTGTGGRNRHSLPPSRRRREGSYSDGGSDSRDDDSDDDHGYASRKPS 60

Query: 61  GSQVPLKKRLDPAERDDDAGSQEEGDNEDVGSDREGDSSNESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDPAERDDD GSQEEGD  D GS RE DSS+ESDVGDDLYK+++DRR+LA 
Sbjct: 61  GSQVPLKKRLDPAERDDDQGSQEEGDYNDAGSGRERDSSDESDVGDDLYKNEEDRRQLAQ 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKKDKGKTAPSRKETSPLPSSRIRSSARSADRA 180
           ++EL+REMILS+RA K+ DK   E +R+K++  + + S++ET PLPS  +RSSARSADRA
Sbjct: 121 LTELEREMILSERADKRGDKKFTEKIRSKRENDRPSRSQRETPPLPSRGVRSSARSADRA 180

Query: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANNRRFSPTKRKPFTAPSLSSSS--ES 240
           AAKDDALNELRAKRLKQQDPEAHRKLRDASRG++ NR  SP KRKPFTA SLSSSS  ES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGNRGLSPVKRKPFTASSLSSSSQSES 240

Query: 241 ESRFQSEDEESTGDGGMIDSDDERSMSGLKGPTFEDIKEITIRRSKLAKWLMEPFFEELI 300
           ESR  SEDE STGDGGM+DS+DER   G  GPTF DIKEITIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRSNSEDEGSTGDGGMVDSEDERGTWGPNGPTFNDIKEITIRRSKLAKWLMEPFFEELI 300

Query: 301 VGCFVRVGIGRSRSGSIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 360
           VGCFVRVGIGRS++G+IYRLC+VRNVDAT+PDR YKLENK T+KYLNV+WGNESSAARWQ
Sbjct: 301 VGCFVRVGIGRSKTGAIYRLCMVRNVDATDPDRTYKLENKTTYKYLNVVWGNESSAARWQ 360

Query: 361 MAMISDSAPLEDEYKQWLKEVERTNGRMLSKQDVLEKKEAIQKANNFVYSAATVKQMLRE 420
           MAMISDS PLE+E++Q ++EVER+ GRM SKQDVLEKKEA+QKA  FVYSAATVKQML+E
Sbjct: 361 MAMISDSPPLEEEFRQLIREVERSGGRMPSKQDVLEKKEALQKAKTFVYSAATVKQMLQE 420

Query: 421 KKSASSRPLNIAAEKDRLRREMDVALSKNDESEVERIKARLQQLEASRRLQMKDTKAIRL 480
           KKS+SSRPLN+AAEKDRLRR++++A SK+D+ EVERIK RLQQLEASR+ Q KD KA+RL
Sbjct: 421 KKSSSSRPLNVAAEKDRLRRDLEIAQSKHDDVEVERIKKRLQQLEASRQSQEKDAKAVRL 480

Query: 481 VEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVGNAGEANGAAEAG 540
            EMNRKNRVENFKNAS L+P+   LKAGEAGYDPFSRRWTRSRNYY   A   + AA A 
Sbjct: 481 AEMNRKNRVENFKNASGLKPVNTGLKAGEAGYDPFSRRWTRSRNYYNAKAPGGDAAAVAN 540

Query: 541 GNSDNAMPASETNRTGSGRTAEAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNF 600
           G+++ A+ +   N  G+   AEAG AATAAAL+ AAGAGKLVDTNAPVD GTESN LH+F
Sbjct: 541 GDTNGAIGSGNGNDAGAA-AAEAGRAATAAALQEAAGAGKLVDTNAPVDEGTESNMLHDF 600

Query: 601 ELPISLAVLQKFGGPMGAQAGFLARKQQIEATVGRQVPENDGRRHALTLTVSDYKRRRGL 659
           ELPISL VL+KFGG  GA AGF+ARKQ+IEATVG +VPENDGRRHALTLTVSDYKRRRGL
Sbjct: 601 ELPISLDVLRKFGGHEGAVAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGL 660

BLAST of Cp4.1LG01g09470 vs. TrEMBL
Match: A0A061GFX4_THECC (PAF1 complex component isoform 1 OS=Theobroma cacao GN=TCM_029914 PE=4 SV=1)

HSP 1 Score: 916.4 bits (2367), Expect = 2.0e-263
Identity = 509/662 (76.89%), Postives = 568/662 (85.80%), Query Frame = 1

Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           MADLENLLLEAAGRT   GRNRHS PPSRR+REGSYSD GSDSRDDDSDDD GYASRKPS
Sbjct: 1   MADLENLLLEAAGRTGTGGRNRHSLPPSRRRREGSYSDGGSDSRDDDSDDDHGYASRKPS 60

Query: 61  GSQVPLKKRLDPAERDDDAGSQEEGDNEDVGSDREGDSSNESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDPAERDDD GSQEEGD +D  S  EGDSS+ESDVGDDLYK++DDRRKLA 
Sbjct: 61  GSQVPLKKRLDPAERDDDQGSQEEGDYDDGVSVHEGDSSDESDVGDDLYKNEDDRRKLAQ 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKKDKGKTAPSRKETSPLPSSR-IRSSARSADR 180
           M+EL+RE+ILS+RA K+ DK   E +R+K++  + + SRKET PLPSSR +RSSARSADR
Sbjct: 121 MTELERELILSERADKRGDKKFTEKIRSKRENDRPSRSRKETPPLPSSRGVRSSARSADR 180

Query: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANNRRFSPTKRKPFTAPSLSSSSES- 240
           AAAKDDALNELRAKRLKQQDPEAHRKLRDASRG++ +R  SP KRKPFTA SLSSSS+S 
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGSRGLSPVKRKPFTASSLSSSSQSD 240

Query: 241 -ESRFQSEDEESTGDGGMIDSDDERSMSGLKGPTFEDIKEITIRRSKLAKWLMEPFFEEL 300
            ESR  SEDE STGDGGM+DSDD+R M G  GPTF+DIKEITIRRSKLAKW MEPFFEEL
Sbjct: 241 SESRSNSEDEGSTGDGGMVDSDDDRGMQGPDGPTFDDIKEITIRRSKLAKWFMEPFFEEL 300

Query: 301 IVGCFVRVGIGRSRSGSIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARW 360
           IVGC+VRVGIGRS+SG IYRLC+VRNVDATEP+R YKLENK T+KYLNV+WGNESSAARW
Sbjct: 301 IVGCYVRVGIGRSKSGPIYRLCMVRNVDATEPERTYKLENKTTYKYLNVVWGNESSAARW 360

Query: 361 QMAMISDSAPLEDEYKQWLKEVERTNGRMLSKQDVLEKKEAIQKANNFVYSAATVKQMLR 420
           QMAMISDS P E+E++Q ++E+ER+ GRM SKQDVLEKKEA+QKA  FVYSAATVKQML+
Sbjct: 361 QMAMISDSPPQEEEFRQLIRELERSGGRMPSKQDVLEKKEALQKAKTFVYSAATVKQMLQ 420

Query: 421 EKKSASSRPLNIAAEKDRLRREMDVALSKNDESEVERIKARLQQLEASRRLQMKDTKAIR 480
           EKKS SSRPLNIAAEKDRLRR++++A SK+DE+EVERIK RLQQLEASR+ Q KD KA+R
Sbjct: 421 EKKSTSSRPLNIAAEKDRLRRDLEIAQSKHDEAEVERIKMRLQQLEASRQAQEKDAKAVR 480

Query: 481 LVEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVGNAGEANGAAEA 540
           L EMNRKNR ENFKNASEL+P+   LKAGEAGYDPFSRRWTRSRNYYV     A+ AA A
Sbjct: 481 LAEMNRKNRAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVAKPPGADAAAVA 540

Query: 541 GGNSDNAMPASETNRTGSGRTAEAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHN 600
             N D     +  N   +   AEAG AAT AAL+ AAGAGKLVDT+APVD GTESN LH+
Sbjct: 541 --NGDRIGVIASGNGNDARAAAEAGRAATVAALQEAAGAGKLVDTSAPVDEGTESNMLHD 600

Query: 601 FELPISLAVLQKFGGPMGAQAGFLARKQQIEATVGRQVPENDGRRHALTLTVSDYKRRRG 659
           FE+PISL  LQ+FGGP GA AGF+ARKQ+IEATVG QVPENDGRRHALTLTVSDYKRRRG
Sbjct: 601 FEIPISLNALQRFGGPQGAVAGFMARKQRIEATVGCQVPENDGRRHALTLTVSDYKRRRG 660

BLAST of Cp4.1LG01g09470 vs. TAIR10
Match: AT1G61040.1 (AT1G61040.1 plus-3 domain-containing protein)

HSP 1 Score: 805.1 bits (2078), Expect = 3.3e-233
Identity = 460/664 (69.28%), Postives = 540/664 (81.33%), Query Frame = 1

Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           M DLENLLLEAAGRTN+AGR+RH  PPS R+REGSYSD  SDSRDD SD+DRGYASRKPS
Sbjct: 1   MGDLENLLLEAAGRTNSAGRSRH--PPSSRRREGSYSDGSSDSRDD-SDEDRGYASRKPS 60

Query: 61  GSQVPLKKRLDPAERDDDAGSQEEGDNEDVGSDREGDSSNESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRL+ AER+D A ++ EG   D  SDREGDSS ESD GDDLYK+++DR+KLAG
Sbjct: 61  GSQVPLKKRLE-AEREDRA-ARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAG 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKKDKGKTAPSRKETSPLPSSR-IRSSARSADR 180
           M+E QREMILS+RA KK DK+  E LR+K++  KT  S+KET PLP+SR +RSSARSADR
Sbjct: 121 MTEFQREMILSERADKKGDKNFTEKLRSKRESEKTPVSKKETQPLPASRGVRSSARSADR 180

Query: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANNRRFSPTKRKPFTAPSLSSSSESE 240
           AAAKDDALNELRAKR+KQQDP A RKLRDAS+G + +R FS TKRKP  + +LSSSS+S+
Sbjct: 181 AAAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSTKRKPLASSNLSSSSQSD 240

Query: 241 SRFQSEDEESTGDGGMIDSDDERSMSGLKGPTFEDIKEITIRRSKLAKWLMEPFFEELIV 300
           S  +S+ ++   +GGM+DSDD+RS      PTFED+KE+TIRRSKLAKWLMEPFFEELIV
Sbjct: 241 SDSRSQSDDEGSNGGMLDSDDDRS----DVPTFEDVKEVTIRRSKLAKWLMEPFFEELIV 300

Query: 301 GCFVRVGIGRSRSGSIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQM 360
           GCFVRVGIGRS+SG IYRLC V+NVDAT+PD+ YKLENK THKYLNV+WGNE+SAARWQM
Sbjct: 301 GCFVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARWQM 360

Query: 361 AMISDSAPLEDEYKQWLKEVERTNGRMLSKQDVLEKKEAIQKANNFVYSAATVKQMLREK 420
           AMISD  PLE+EY+QW++EVERTNGRM +KQD+ EKKEAIQ+ N+FVYSA TVKQML+EK
Sbjct: 361 AMISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRTNSFVYSAETVKQMLQEK 420

Query: 421 KSASSRPLNIAAEKDRLRREMDVALSKNDESEVERIKARLQQLEASRRLQMKDTKAIRLV 480
           KSAS RP+N+AAEKDRLR+E+++A SKNDE+ VERIK++++QL+ASR  +  D KA++L 
Sbjct: 421 KSASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKSKIKQLDASRNKKGVDKKALKLA 480

Query: 481 EMNRKNRVENFKNASELRPL-KDLKAGEAGYDPFSRRWTRSRNYY----VGNAGEANGAA 540
           EMN+KNR ENFKNASE++ +   LKAGEAGYDPFSRRWTRS NYY     G  GE N AA
Sbjct: 481 EMNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYYNGKNKGKDGEENEAA 540

Query: 541 EAGGNSDNAMPASETNRTGSGRTAEAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSL 600
            A         A ETN    G  A AG+ AT AALEAAA AGKL+DT AP+  G E N L
Sbjct: 541 VAA--------AVETN----GADAGAGVEATEAALEAAAEAGKLIDTRAPIGQGAEHNQL 600

Query: 601 HNFELPISLAVLQKFGGPMGAQAGFLARKQQIEATVGRQVPENDGRRHALTLTVSDYKRR 659
           HNFEL +SL  LQK+GGP G Q  F+ARKQ  EATVG +V ENDG+RH LTLTVSDYKRR
Sbjct: 601 HNFELSLSLTALQKYGGPQGVQKAFMARKQLTEATVGCRVAENDGKRHGLTLTVSDYKRR 643

BLAST of Cp4.1LG01g09470 vs. NCBI nr
Match: gi|449462844|ref|XP_004149150.1| (PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis sativus])

HSP 1 Score: 1133.6 bits (2931), Expect = 0.0e+00
Identity = 610/660 (92.42%), Postives = 634/660 (96.06%), Query Frame = 1

Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS
Sbjct: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60

Query: 61  GSQVPLKKRLDPAERDDDAGSQEEGDNEDVGSDREGDSSNESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDP ERDDD GSQEEG++EDVGS+REGDSS+ESDVGDDLYKDDDDRRKLAG
Sbjct: 61  GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKKDKGKTAPSRKETSPLPSSRIRSSARSADRA 180
           MSELQREMILSDRASKKNDKHLYESLRAK DKGK+APSRKET PLPSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180

Query: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANNRRFSPTKRKPFTAPSLSSSS--ES 240
           AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNAN+RRFSPTKRKPFTAPSLSSSS  ES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240

Query: 241 ESRFQSEDEESTGDGGMIDSDDERSMSGLKGPTFEDIKEITIRRSKLAKWLMEPFFEELI 300
           ESRFQS+DE STGDGGMIDSDDERS+ G  GPTFEDIKE+TIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300

Query: 301 VGCFVRVGIGRSRSGSIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 360
           VGCFVRVGIGRSRSG IYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNE+SAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360

Query: 361 MAMISDSAPLEDEYKQWLKEVERTNGRMLSKQDVLEKKEAIQKANNFVYSAATVKQMLRE 420
           MAM+SDSAPLEDEYKQW+KEVERT GRMLSKQD+LEKKEAIQK NNFVYSAATVKQML++
Sbjct: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420

Query: 421 KKSASSRPLNIAAEKDRLRREMDVALSKNDESEVERIKARLQQLEASRRLQMKDTKAIRL 480
           KKSAS+RPLNIAAEKDRLRREMDVA+SKNDE+EVERIK RLQQLEASRRLQMKD KAIRL
Sbjct: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480

Query: 481 VEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVGNAGEANGAAEAGG 540
            EMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYV NAGEANGAAEA G
Sbjct: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540

Query: 541 NSDNAMPASETNRTGSGRTAEAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600
           NSDN  PA E  RT +G T++AGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE
Sbjct: 541 NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600

Query: 601 LPISLAVLQKFGGPMGAQAGFLARKQQIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 659
           LPISLA+LQKFGG +GAQAGFLARKQ+IEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660

BLAST of Cp4.1LG01g09470 vs. NCBI nr
Match: gi|659107572|ref|XP_008453742.1| (PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis melo])

HSP 1 Score: 1126.7 bits (2913), Expect = 0.0e+00
Identity = 607/660 (91.97%), Postives = 630/660 (95.45%), Query Frame = 1

Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           MADLENLLLEAAGRTNA G NRHSHPPSRRQREGSYSD GSDSRDDDSDD+RGYASRKPS
Sbjct: 1   MADLENLLLEAAGRTNAGGGNRHSHPPSRRQREGSYSDGGSDSRDDDSDDERGYASRKPS 60

Query: 61  GSQVPLKKRLDPAERDDDAGSQEEGDNEDVGSDREGDSSNESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDP ERDDD GS EEG++EDVGS+ EGDSS+ESDVGDDLYKDDDDRRKLAG
Sbjct: 61  GSQVPLKKRLDPTERDDDGGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKKDKGKTAPSRKETSPLPSSRIRSSARSADRA 180
           MSELQREMILSDRASKKNDKHLYESLRAK DKGKTAPSRKET PLPSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKTAPSRKETPPLPSSRIRSSARSADRA 180

Query: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANNRRFSPTKRKPFTAPSLSSSS--ES 240
           AAKDDALNELRAKRLKQQDPEAHRKLRDASRGN+NNRRFSPTKRKPFTAPSLSSSS  ES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNSNNRRFSPTKRKPFTAPSLSSSSQSES 240

Query: 241 ESRFQSEDEESTGDGGMIDSDDERSMSGLKGPTFEDIKEITIRRSKLAKWLMEPFFEELI 300
           ESRFQS+DE STGDGGMIDSDDERSM G  GPTFEDIKEITIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERSMPGSDGPTFEDIKEITIRRSKLAKWLMEPFFEELI 300

Query: 301 VGCFVRVGIGRSRSGSIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 360
           VGCFVRVGIGRSRSG IYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNE+SAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNENSAARWQ 360

Query: 361 MAMISDSAPLEDEYKQWLKEVERTNGRMLSKQDVLEKKEAIQKANNFVYSAATVKQMLRE 420
           MAM+SDSAPLEDEYKQW+KEVERT GRMLSKQDVLEKK+AIQK NNFVYSAATVKQML++
Sbjct: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDVLEKKDAIQKVNNFVYSAATVKQMLQD 420

Query: 421 KKSASSRPLNIAAEKDRLRREMDVALSKNDESEVERIKARLQQLEASRRLQMKDTKAIRL 480
           KKSAS+RPLNIAAEKDRLRREMDVA+SKNDE+EVERIK RLQQLEASRRLQMKD KAIRL
Sbjct: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKGRLQQLEASRRLQMKDAKAIRL 480

Query: 481 VEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVGNAGEANGAAEAGG 540
            EMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYV NAGEANGAAEA G
Sbjct: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540

Query: 541 NSDNAMPASETNRTGSGRTAEAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600
           NSD   PA E+ RTG+G T++AGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE
Sbjct: 541 NSDTVTPALESTRTGAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600

Query: 601 LPISLAVLQKFGGPMGAQAGFLARKQQIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 659
           LPISLA+LQKFGG +GAQAGFLARKQ+IEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660

BLAST of Cp4.1LG01g09470 vs. NCBI nr
Match: gi|802784101|ref|XP_012091565.1| (PREDICTED: RNA polymerase-associated protein RTF1 homolog [Jatropha curcas])

HSP 1 Score: 924.9 bits (2389), Expect = 8.1e-266
Identity = 511/661 (77.31%), Postives = 579/661 (87.59%), Query Frame = 1

Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           MADLENLLLEAAGRT ++GRNR++HPPSRR+REGSYSD GSDSRD+DSDDDRGYASRKPS
Sbjct: 1   MADLENLLLEAAGRTGSSGRNRNAHPPSRRRREGSYSDGGSDSRDEDSDDDRGYASRKPS 60

Query: 61  GSQVPLKKRLDPAERDDDAGSQEEGDNEDVGSDREGDSSNESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDPAERDDD GSQEEG  +D  SDREGDSS+ESDVGDDLYKD+DDRRKLA 
Sbjct: 61  GSQVPLKKRLDPAERDDDQGSQEEGGYDDGASDREGDSSDESDVGDDLYKDEDDRRKLAQ 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKKDKGKTAPSRKETSPLPSSR-IRSSARSADR 180
           MSEL+REMILS+RA KK DK+L E +R+K+D  +   SRKET PLPSSR +R+SARSADR
Sbjct: 121 MSELEREMILSERADKKGDKNLTERIRSKRDSERATRSRKETPPLPSSRGVRTSARSADR 180

Query: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANNRRFSPTKRKPFTAPSL-SSSSES 240
           AAAKDDALNELRAKRLKQQDPEAHRKLRD SRG + +R  SP +RK FT+ SL SSSSES
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDVSRGTSGSRGVSPVRRKRFTSASLSSSSSES 240

Query: 241 ESRFQSEDEESTGDGGMIDSDDERSMSGLKGPTFEDIKEITIRRSKLAKWLMEPFFEELI 300
           +SR  SEDE STGDGGM DSD++R   G +G T++DI+E+TIRRSKLAKWLMEP+FEELI
Sbjct: 241 DSRSHSEDEASTGDGGMADSDEDRE-PGSEGLTYDDIREVTIRRSKLAKWLMEPWFEELI 300

Query: 301 VGCFVRVGIGRSRSGSIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 360
           VGCFVRVGIGRS+SG IYRLCLVRNVDA +PDR YKLENK T+KYLNVIWGNESSAARWQ
Sbjct: 301 VGCFVRVGIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAARWQ 360

Query: 361 MAMISDSAPLEDEYKQWLKEVERTNGRMLSKQDVLEKKEAIQKANNFVYSAATVKQMLRE 420
           MAM+SDSAP EDEYKQW++EVER+ GRM +KQD+LEKKEAI+K+N FVYSAATVKQML+E
Sbjct: 361 MAMVSDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIKKSNTFVYSAATVKQMLQE 420

Query: 421 KKSASSRPLNIAAEKDRLRREMDVALSKNDESEVERIKARLQQLEASRRLQMKDTKAIRL 480
           KKSAS+RPLN+AAEKDRLRRE++VA  K D++EVERI+AR+Q+LEASR+ Q KD KAIRL
Sbjct: 421 KKSASTRPLNVAAEKDRLRRELEVAQMKQDDAEVERIRARIQELEASRQAQEKDAKAIRL 480

Query: 481 VEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVGNAGEANGAAEAG 540
            EMNRKNR ENF+NASEL+P+   LKAGEAGYDPFSRRWTRSRNYYV   G A+ AAEA 
Sbjct: 481 AEMNRKNRAENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPGGADVAAEAN 540

Query: 541 GNSDNAMPASETNRTGSGRTAEAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNF 600
            N   A+  + +N   +G  AEAGMAATAAALEAAA AGKLVDT APVD GTESN+LH+F
Sbjct: 541 NNGTAAV--AHSNGAATGTLAEAGMAATAAALEAAADAGKLVDTAAPVDQGTESNTLHDF 600

Query: 601 ELPISLAVLQKFGGPMGAQAGFLARKQQIEATVGRQVPENDGRRHALTLTVSDYKRRRGL 659
           +LPISL  L+KFGG  GA+AGF+ARKQQIEATVG +VPENDGRRHALTLTVSDYKRRRGL
Sbjct: 601 DLPISLTALEKFGGAKGAKAGFMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRRGL 658

BLAST of Cp4.1LG01g09470 vs. NCBI nr
Match: gi|703114113|ref|XP_010100559.1| (RNA polymerase-associated protein RTF1-like protein [Morus notabilis])

HSP 1 Score: 919.5 bits (2375), Expect = 3.4e-264
Identity = 515/662 (77.79%), Postives = 570/662 (86.10%), Query Frame = 1

Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           MA+LENLLLEAAGRT +AGRNRHS PPSRR+REGSYSD GSDSRDDDSDDDRGYA+RKPS
Sbjct: 1   MAELENLLLEAAGRTRSAGRNRHSIPPSRRRREGSYSDGGSDSRDDDSDDDRGYANRKPS 60

Query: 61  GSQVPLKKRLDPAERDDDAGSQEEGDNEDVGSDREGDSSNESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDP E DDD GS+EEGD +D GSDREGDS  ESDVG DLYKDDDDRRKLA 
Sbjct: 61  GSQVPLKKRLDPTEMDDDQGSEEEGD-DDRGSDREGDS--ESDVGSDLYKDDDDRRKLAE 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKKD-KGKTAPSRKETSPLPSSRIRSSARSADR 180
           M+ELQREMIL DRASKK DK+L E LR K D KGK   SRKET PLPSSR+RSSARSADR
Sbjct: 121 MTELQREMILLDRASKKEDKNLKEKLRPKWDNKGKATQSRKET-PLPSSRVRSSARSADR 180

Query: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANNRRFSPTKRKPFTAPSLSSSSES- 240
           AAAKDDALNELRAKRLKQQDPEAH KLRDASRG + +R     KRK +TA SLSSSS+S 
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHGKLRDASRGGSGSRNLLHNKRKSYTATSLSSSSQSD 240

Query: 241 -ESRFQSEDEESTGDGGMIDSDDERSMSGLKGPTFEDIKEITIRRSKLAKWLMEPFFEEL 300
            ES  QSEDE STGDGGMIDSDDER + G +G TF+DIKE+T+RRSKLAKWLMEPFFEEL
Sbjct: 241 SESESQSEDEGSTGDGGMIDSDDERGIPGSEGLTFDDIKEVTVRRSKLAKWLMEPFFEEL 300

Query: 301 IVGCFVRVGIGRSRSGSIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARW 360
           IVGCFVRVGIGRS+SG IYRLC+VRNVDA+EPDRQYKL+NKITHKYLNV+WGNE+SAARW
Sbjct: 301 IVGCFVRVGIGRSKSGPIYRLCMVRNVDASEPDRQYKLDNKITHKYLNVVWGNENSAARW 360

Query: 361 QMAMISDSAPLEDEYKQWLKEVERTNGRMLSKQDVLEKKEAIQKANNFVYSAATVKQMLR 420
           QMAM+SDS P E+E+KQW++EVER+ GRM +K D+L+KKE+I+K N FVYSAATVKQML+
Sbjct: 361 QMAMVSDSVPNEEEFKQWVREVERSGGRMPTKHDILDKKESIKKINTFVYSAATVKQMLQ 420

Query: 421 EKKSASSRPLNIAAEKDRLRREMDVALSKNDESEVERIKARLQQLEASRRLQMKDTKAIR 480
           EKKSAS+RPLNIA EKDRLRRE++VA SKNDE EV+RIK RLQ+LEASR+ +  D KAIR
Sbjct: 421 EKKSASARPLNIALEKDRLRRELEVAQSKNDEVEVDRIKTRLQELEASRKAKQTDAKAIR 480

Query: 481 LVEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVGNAGEANGAAEA 540
           L EMNRKNRVENFKNASEL+P+   LKAGEAGYDPFSRRWTRSRNYYVG  GE    + A
Sbjct: 481 LAEMNRKNRVENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVGKPGEVKEDSGA 540

Query: 541 GGNSDNAMPASETNRTGSGRTAEAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHN 600
              ++ A   +E N       AEAG+AAT AALEAAA AGKLVDTNAPVD GT SN LHN
Sbjct: 541 NAGNNGASTDAENNGRHGIVAAEAGIAATEAALEAAADAGKLVDTNAPVDQGTVSNMLHN 600

Query: 601 FELPISLAVLQKFGGPMGAQAGFLARKQQIEATVGRQVPENDGRRHALTLTVSDYKRRRG 659
           FELPISL+VLQKFGGP GAQAGF+ARKQ+IEATVG +VPENDGRRHALTL+V DYKRRRG
Sbjct: 601 FELPISLSVLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLSVGDYKRRRG 658

BLAST of Cp4.1LG01g09470 vs. NCBI nr
Match: gi|823245417|ref|XP_012455370.1| (PREDICTED: RNA polymerase-associated protein RTF1 homolog [Gossypium raimondii])

HSP 1 Score: 918.3 bits (2372), Expect = 7.6e-264
Identity = 508/661 (76.85%), Postives = 572/661 (86.54%), Query Frame = 1

Query: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
           MADLENLLLEAAGRT   GRNRHS PPSRR+REGSYSD GSDSRDDDSDDD GYASRKPS
Sbjct: 1   MADLENLLLEAAGRTGTGGRNRHSLPPSRRRREGSYSDGGSDSRDDDSDDDHGYASRKPS 60

Query: 61  GSQVPLKKRLDPAERDDDAGSQEEGDNEDVGSDREGDSSNESDVGDDLYKDDDDRRKLAG 120
           GSQVPLKKRLDPAERDDD GSQEEGD  D GS RE DSS+ESDVGDDLYK+++DRR+LA 
Sbjct: 61  GSQVPLKKRLDPAERDDDQGSQEEGDYNDAGSGRERDSSDESDVGDDLYKNEEDRRQLAQ 120

Query: 121 MSELQREMILSDRASKKNDKHLYESLRAKKDKGKTAPSRKETSPLPSSRIRSSARSADRA 180
           ++EL+REMILS+RA K+ DK   E +R+K++  + + S++ET PLPS  +RSSARSADRA
Sbjct: 121 LTELEREMILSERADKRGDKKFTEKIRSKRENDRPSRSQRETPPLPSRGVRSSARSADRA 180

Query: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANNRRFSPTKRKPFTAPSLSSSS--ES 240
           AAKDDALNELRAKRLKQQDPEAHRKLRDASRG++ NR  SP KRKPFTA SLSSSS  ES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGNRGLSPVKRKPFTASSLSSSSQSES 240

Query: 241 ESRFQSEDEESTGDGGMIDSDDERSMSGLKGPTFEDIKEITIRRSKLAKWLMEPFFEELI 300
           ESR  SEDE STGDGGM+DS+DER   G  GPTF DIKEITIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRSNSEDEGSTGDGGMVDSEDERGTWGPNGPTFNDIKEITIRRSKLAKWLMEPFFEELI 300

Query: 301 VGCFVRVGIGRSRSGSIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 360
           VGCFVRVGIGRS++G+IYRLC+VRNVDAT+PDR YKLENK T+KYLNV+WGNESSAARWQ
Sbjct: 301 VGCFVRVGIGRSKTGAIYRLCMVRNVDATDPDRTYKLENKTTYKYLNVVWGNESSAARWQ 360

Query: 361 MAMISDSAPLEDEYKQWLKEVERTNGRMLSKQDVLEKKEAIQKANNFVYSAATVKQMLRE 420
           MAMISDS PLE+E++Q ++EVER+ GRM SKQDVLEKKEA+QKA  FVYSAATVKQML+E
Sbjct: 361 MAMISDSPPLEEEFRQLIREVERSGGRMPSKQDVLEKKEALQKAKTFVYSAATVKQMLQE 420

Query: 421 KKSASSRPLNIAAEKDRLRREMDVALSKNDESEVERIKARLQQLEASRRLQMKDTKAIRL 480
           KKS+SSRPLN+AAEKDRLRR++++A SK+D+ EVERIK RLQQLEASR+ Q KD KA+RL
Sbjct: 421 KKSSSSRPLNVAAEKDRLRRDLEIAQSKHDDVEVERIKKRLQQLEASRQSQEKDAKAVRL 480

Query: 481 VEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVGNAGEANGAAEAG 540
            EMNRKNRVENFKNAS L+P+   LKAGEAGYDPFSRRWTRSRNYY   A   + AA A 
Sbjct: 481 AEMNRKNRVENFKNASGLKPVNTGLKAGEAGYDPFSRRWTRSRNYYNAKAPGGDAAAVAN 540

Query: 541 GNSDNAMPASETNRTGSGRTAEAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNF 600
           G+++ A+ +   N  G+   AEAG AATAAAL+ AAGAGKLVDTNAPVD GTESN LH+F
Sbjct: 541 GDTNGAIGSGNGNDAGAA-AAEAGRAATAAALQEAAGAGKLVDTNAPVDEGTESNMLHDF 600

Query: 601 ELPISLAVLQKFGGPMGAQAGFLARKQQIEATVGRQVPENDGRRHALTLTVSDYKRRRGL 659
           ELPISL VL+KFGG  GA AGF+ARKQ+IEATVG +VPENDGRRHALTLTVSDYKRRRGL
Sbjct: 601 ELPISLDVLRKFGGHEGAVAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGL 660