BLAST of CmaCh04G007870 vs. Swiss-Prot
Match:
VIP5_ARATH (Protein RTF1 homolog OS=Arabidopsis thaliana GN=VIP5 PE=1 SV=1)
HSP 1 Score: 803.5 bits (2074), Expect = 1.8e-231
Identity = 457/664 (68.83%), Postives = 540/664 (81.33%), Query Frame = 1
Query: 27 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 86
M DLENLLLEAAGRTN+AGR+RH PPS R+REGSYSD SDSRDD SD+DRGYASRKPS
Sbjct: 1 MGDLENLLLEAAGRTNSAGRSRH--PPSSRRREGSYSDGSSDSRDD-SDEDRGYASRKPS 60
Query: 87 GSQVPLKKRLDPAERDDDAGSQEEGDNEDVGSDREGDSSNESDVGDDLYKDDDDRRKLAG 146
GSQVPLKKRL+ AER+D A ++ EG D SDREGDSS ESD GDDLYK+++DR+KLAG
Sbjct: 61 GSQVPLKKRLE-AEREDRA-ARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAG 120
Query: 147 MSELQREMILSDRASKKNDKHLYESLRAKKDKGKTAPSRKETLPLPSSR-IRSSARSADR 206
M+E QREMILS+RA KK DK+ E LR+K++ KT S+KET PLP+SR +RSSARSADR
Sbjct: 121 MTEFQREMILSERADKKGDKNFTEKLRSKRESEKTPVSKKETQPLPASRGVRSSARSADR 180
Query: 207 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNTNNRRFSPTKRKPFTAPSLSSSSESE 266
AAAKDDALNELRAKR+KQQDP A RKLRDAS+G + +R FS TKRKP + +LSSSS+S+
Sbjct: 181 AAAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSTKRKPLASSNLSSSSQSD 240
Query: 267 SRFQSEDEESTGDGGMVDSDDERSMSGLKGPTFEDIKEITIRRSKLAKWLMEPFFEELIV 326
S +S+ ++ +GGM+DSDD+RS PTFED+KE+TIRRSKLAKWLMEPFFEELIV
Sbjct: 241 SDSRSQSDDEGSNGGMLDSDDDRS----DVPTFEDVKEVTIRRSKLAKWLMEPFFEELIV 300
Query: 327 GCFVRVGIGRSRSGSIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQM 386
GCFVRVGIGRS+SG IYRLC V+NVDAT+PD+ YKLENK THKYLNV+WGNE+SAARWQM
Sbjct: 301 GCFVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARWQM 360
Query: 387 AMVSDSAPLEDEYKQWLKEVERTNGRMLSRQDVLEKKEAIQKANNFVYSAATVKQMLRDK 446
AM+SD PLE+EY+QW++EVERTNGRM ++QD+ EKKEAIQ+ N+FVYSA TVKQML++K
Sbjct: 361 AMISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRTNSFVYSAETVKQMLQEK 420
Query: 447 KSASSRPLNIAAEKDRLRREMDVALSKNDESEVERIKARLQQLEASRRLQMKDTKAIRLV 506
KSAS RP+N+AAEKDRLR+E+++A SKNDE+ VERIK++++QL+ASR + D KA++L
Sbjct: 421 KSASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKSKIKQLDASRNKKGVDKKALKLA 480
Query: 507 EMNRKNRVENFKNASELRPL-KDLKAGEAGYDPFSRRWTRSRNYY----VGNAGEANGAA 566
EMN+KNR ENFKNASE++ + LKAGEAGYDPFSRRWTRS NYY G GE N AA
Sbjct: 481 EMNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYYNGKNKGKDGEENEAA 540
Query: 567 EAGGNSDNAMPASETNRTGSGRTAEAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSL 626
A A ETN G A AG+ AT AALEAAA AGKL+DT AP+ G E N L
Sbjct: 541 VAA--------AVETN----GADAGAGVEATEAALEAAAEAGKLIDTRAPIGQGAEHNQL 600
Query: 627 HNFELPISLAVLQKFGGPMGAQAGFLARKQQIEATVGRQVPENDGRRHALTLTVSDYKRR 685
HNFEL +SL LQK+GGP G Q F+ARKQ EATVG +V ENDG+RH LTLTVSDYKRR
Sbjct: 601 HNFELSLSLTALQKYGGPQGVQKAFMARKQLTEATVGCRVAENDGKRHGLTLTVSDYKRR 643
BLAST of CmaCh04G007870 vs. Swiss-Prot
Match:
RTF1_MOUSE (RNA polymerase-associated protein RTF1 homolog OS=Mus musculus GN=Rtf1 PE=1 SV=1)
HSP 1 Score: 97.8 bits (242), Expect = 4.8e-19
Identity = 179/710 (25.21%), Postives = 307/710 (43.24%), Query Frame = 1
Query: 12 GQVTEVTDFGVRGCDMADLENLLLEAAGRTNAAGRNRH---SHPPSRRQREGSYSDAGSD 71
G+V +D G D +L+ LL A R + + S P + E S SD D
Sbjct: 52 GRVVIDSDTEDSGSD-ENLDQELLSLAKRKRSDSEEKEPPVSQPAASSDSETSDSD---D 111
Query: 72 SRDDDSDDDRGYASRKPSGSQVPLKKRLDPA------ERDDDAGSQ--EEGDNEDV---- 131
S+ ++ + + +KK+ + A +RD A S EEG+ D
Sbjct: 112 EWTFGSNKNKKKGKTRKVEKKGAMKKQANKAASSGSSDRDSSAESSAPEEGEVSDSESSS 171
Query: 132 -GSDREGDSSNESD-----VGDDLYKDDDDRRKLAGMSELQREMILSDRASK----KNDK 191
S + DSS+E + G+DL D++DR +L M+E +RE L +R K K
Sbjct: 172 SSSSSDSDSSSEDEEFHDGYGEDLMGDEEDRARLEQMTEKEREQELFNRIEKREVLKRRF 231
Query: 192 HLYESLRAKKDKGKTAPSRKETLPLPSSRIRSSARSADRAAAKDDALNELRAKRLKQQDP 251
+ + L+ K K K +K+ ++ S + K E R+KR ++ D
Sbjct: 232 EIKKKLKTAKKKEKKEKKKKQEEEQEKKKLTQIQESQVTSHNK-----ERRSKRDEKLDK 291
Query: 252 --EAHRKLRDASRGNTNNRRFSPTKRKPFTAPSLSSSSESESRFQSEDEESTGDGGMVDS 311
+A +L+ N K++P + S E E E+S S
Sbjct: 292 KSQAMEELKAEREKRKNRTAELLAKKQPLKTSEVYSDDEEEEDDDKSSEKSDRSSRTSSS 351
Query: 312 DDERSMSGLKGPTF-----EDIKEITIRRSKLAKWLMEPFFEELIVGCFVRVGIGRSRSG 371
D+E + + E++ + + R KL +W PFF + + GCFVR+GIG S
Sbjct: 352 DEEEEKEEIPPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSK 411
Query: 372 SIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQMAMVSDSAPLEDEYK 431
+YR+ + V E + Y+L T+K L + GN+ R + VS+ E E+
Sbjct: 412 PVYRVAEITGV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFM 471
Query: 432 QWLKEVERTNGRMLSRQDVLEKKE-AIQKANNFVYSAATVKQMLRDKKSASSRPLNIAAE 491
+W KE + G L D + KKE +I++A N+ ++ +++++++K+ P N A +
Sbjct: 472 KW-KEAMFSAGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMK 531
Query: 492 KDRLRREMDVALSKNDESEVERIKARLQQL-EASRRLQMKDTKAIRLVE-MNRKNRVENF 551
K +L +E +A D+ + ++I+ +L +L E + L + TK I + +N++NR N
Sbjct: 532 KTQLLKEKAMAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNI 591
Query: 552 KNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVGNAGEANGAAEAGGNSDNAMPASETN 611
+ + + DPF+RR + + V N+ + A +A A+ A
Sbjct: 592 VESEKALVAESHNMRNQQMDPFTRR--QCKPTIVSNSRDP--AVQA------AILAQLNA 651
Query: 612 RTGSGRTAEAGMAATAAALEAAAGAGKLVDTNAPV--DGGTESNSLHNFELPISLAVLQK 671
+ GSG + A E + G GK D N+ D + +H+F++ I L V
Sbjct: 652 KYGSGVLPD-------APKEMSKGQGKDKDLNSKTASDLSEDLFKVHDFDVKIDLQV--- 711
Query: 672 FGGPMGAQAGFLARKQQIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 685
+ + + A + P DG +L + DYK+RRGL+
Sbjct: 712 -----------PSSESKALAITSKAPPAKDGAPRR-SLNLEDYKKRRGLI 715
BLAST of CmaCh04G007870 vs. Swiss-Prot
Match:
RTF1_HUMAN (RNA polymerase-associated protein RTF1 homolog OS=Homo sapiens GN=RTF1 PE=1 SV=4)
HSP 1 Score: 97.1 bits (240), Expect = 8.2e-19
Identity = 161/661 (24.36%), Postives = 282/661 (42.66%), Query Frame = 1
Query: 41 TNAAGRNRHSHPPSRRQREGSYS-DAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPA 100
T + +N+ + +++G+ A + SD D S P +V
Sbjct: 105 TFGSNKNKKKGKARKIEKKGTMKKQANKTASSGSSDKDSSAESSAPEEGEVS-------- 164
Query: 101 ERDDDAGSQEEGDNEDVGSDREGDSSNESDVGDDLYKDDDDRRKLAGMSELQREMILSDR 160
D D+ S + D S+ D G+DL D++DR +L M+E +RE L +R
Sbjct: 165 --DSDSNSSSSSSDSDSSSE---DEEFHDGYGEDLMGDEEDRARLEQMTEKEREQELFNR 224
Query: 161 ASK----KNDKHLYESLRAKKDKGKTAPSRKETLPLPSSRIRSSARSADRAAAKDDALNE 220
K K + + L+ K K K +K+ ++ S + K E
Sbjct: 225 IEKREVLKRRFEIKKKLKTAKKKEKKEKKKKQEEEQEKKKLTQIQESQVTSHNK-----E 284
Query: 221 LRAKRLKQQDP--EAHRKLRDASRGNTNNRRFSPTKRKPFTAPSLSSSSESESRFQSEDE 280
R+KR ++ D +A +L+ N K++P + S E E E
Sbjct: 285 RRSKRDEKLDKKSQAMEELKAEREKRKNRTAELLAKKQPLKTSEVYSDDEEEEEDDKSSE 344
Query: 281 ESTGDGGMVDSDDERSMSGLKGPTF-----EDIKEITIRRSKLAKWLMEPFFEELIVGCF 340
+S SD+E + + E++ + + R KL +W PFF + + GCF
Sbjct: 345 KSDRSSRTSSSDEEEEKEEIPPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCF 404
Query: 341 VRVGIGRSRSGSIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQMAMV 400
VR+GIG S +YR+ + V E + Y+L T+K L + GN+ R + V
Sbjct: 405 VRIGIGNHNSKPVYRVAEITGV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFV 464
Query: 401 SDSAPLEDEYKQWLKEVERTNGRMLSRQDVLEKKE-AIQKANNFVYSAATVKQMLRDKKS 460
S+ E E+ +W KE + G L D + KKE +I++A N+ ++ +++++++K+
Sbjct: 465 SNQEFTESEFMKW-KEAMFSAGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKER 524
Query: 461 ASSRPLNIAAEKDRLRREMDVALSKNDESEVERIKARLQQL-EASRRLQMKDTKAIRLVE 520
P N A +K +L +E +A D+ + ++I+ +L +L E + L + TK I +
Sbjct: 525 FRKAPPNYAMKKTQLLKEKAMAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAIS 584
Query: 521 -MNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVGNAGEANGAAEAGGN 580
+N++NR N + + + DPF+RR + + V N+ + A +A
Sbjct: 585 YINQRNREWNIVESEKALVAESHNMKNQQMDPFTRR--QCKPTIVSNSRDP--AVQA--- 644
Query: 581 SDNAMPASETNRTGSGRTAEAGMAATAAALEAAAGAGKLVDTN--APVDGGTESNSLHNF 640
A+ A + GSG + A E + G GK D N + D + +H+F
Sbjct: 645 ---AILAQLNAKYGSGVLPD-------APKEMSKGQGKDKDLNSKSASDLSEDLFKVHDF 704
Query: 641 ELPISLAVLQKFGGPMGAQAGFLARKQQIEATVGRQVPENDGRRHALTLTVSDYKRRRGL 685
++ I L V + + + A + P DG +L + DYK+RRGL
Sbjct: 705 DVKIDLQV--------------PSSESKALAITSKAPPAKDGAPRR-SLNLEDYKKRRGL 710
BLAST of CmaCh04G007870 vs. Swiss-Prot
Match:
RTF1_PONAB (RNA polymerase-associated protein RTF1 homolog (Fragment) OS=Pongo abelii GN=RTF1 PE=2 SV=2)
HSP 1 Score: 87.4 bits (215), Expect = 6.5e-16
Identity = 151/607 (24.88%), Postives = 264/607 (43.49%), Query Frame = 1
Query: 41 TNAAGRNRHSHPPSRRQREGSYS-DAGSDSRDDDSDDDRGYASRKPSGSQVPLKKRLDPA 100
T + +N+ + +++G+ A + SD D S P +V
Sbjct: 100 TFGSNKNKKKGKARKIEKKGTMKKQANKTASSGSSDKDSSAESSAPEEGEVS-------- 159
Query: 101 ERDDDAGSQEEGDNEDVGSDREGDSSNESDVGDDLYKDDDDRRKLAGMSELQREMILSDR 160
D D+ S + D S+ D G+DL D++DR +L M+E +RE L +R
Sbjct: 160 --DSDSNSSSSSSDSDSSSE---DEEFHDGYGEDLMGDEEDRARLEQMTEKEREQELFNR 219
Query: 161 ASK----KNDKHLYESLRAKKDKGKTAPSRKETLPLPSSRIRSSARSADRAAAKDDALNE 220
K K + + L+ K K K +K+ ++ S + K E
Sbjct: 220 IEKREVLKRRFEIKKKLKTAKKKEKKEKKKKQEEEQEKKKLTQIQESQVTSHNK-----E 279
Query: 221 LRAKRLKQQDP--EAHRKLRDASRGNTNNRRFSP-TKRKPFTAPSLSSSSESESRFQSED 280
R+KR ++ D +A +L+ A R NR K++P + S E E
Sbjct: 280 RRSKRDEKLDKKSQAMEELK-AEREKRKNRTVELLAKKQPLKTSEVYSDDEEEEEDDKSS 339
Query: 281 EESTGDGGMVDSDDERSMSGLKGPTF-----EDIKEITIRRSKLAKWLMEPFFEELIVGC 340
E+S SD+E + + E++ + + R KL +W PFF + + GC
Sbjct: 340 EKSDRSSRTSSSDEEEEKEEIPPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGC 399
Query: 341 FVRVGIGRSRSGSIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQMAM 400
FVR+GIG S +YR+ + V E + Y+L T+K L + GN+ R +
Sbjct: 400 FVRIGIGNHNSKPVYRVAEITGV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEF 459
Query: 401 VSDSAPLEDEYKQWLKEVERTNGRMLSRQDVLEKKE-AIQKANNFVYSAATVKQMLRDKK 460
VS+ E E+ +W KE + G L D + KKE +I++A N+ ++ +++++++K+
Sbjct: 460 VSNQEFTESEFMKW-KEAMFSAGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKE 519
Query: 461 SASSRPLNIAAEKDRLRREMDVALSKNDESEVERIKARLQQL-EASRRLQMKDTKAIRLV 520
P N A +K +L +E +A D+ + ++I+ +L +L E + L + TK I +
Sbjct: 520 RFRKAPPNYAMKKTQLLKEKAMAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI 579
Query: 521 E-MNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVGNAGEANGAAEAGG 580
+N++NR N + + + DPF+RR + + V N+ + A +A
Sbjct: 580 SYINQRNREWNIVESEKALVAESHNMKNQQMDPFTRR--QCKPTIVSNSRDP--AVQA-- 639
Query: 581 NSDNAMPASETNRTGSGRTAEAGMAATAAALEAAAGAGKLVDTN--APVDGGTESNSLHN 630
A+ A + GSG + A E + G GK D N + D + +H+
Sbjct: 640 ----AILAQLNAKYGSGVLPD-------APKEMSKGQGKDKDLNSKSASDLSEDLFKVHD 665
BLAST of CmaCh04G007870 vs. Swiss-Prot
Match:
RTF1_CAEEL (RNA polymerase-associated protein RTF1 homolog OS=Caenorhabditis elegans GN=rtfo-1 PE=2 SV=1)
HSP 1 Score: 80.5 bits (197), Expect = 7.9e-14
Identity = 141/591 (23.86%), Postives = 256/591 (43.32%), Query Frame = 1
Query: 71 DDDSDDDRGYASRKPSGSQVPLKKRLDPAERDDDAGSQEEGDNEDVG----SDREGDSSN 130
D DSD D G KP + D + D DA + + R SS+
Sbjct: 22 DSDSDSDAGPKPGKPLST--------DSSASDSDAEKPQAKPAKKKTLTKRKRRATGSSD 81
Query: 131 ESDVGDDLYKDDDDRRKLAGMSELQREMILSDRASKKNDKHLYESLRAKKDKGKTAPSRK 190
+ V DDL+ D +D+ + ++EL++E + +R + + E + + K S K
Sbjct: 82 DDQVDDDLFADKEDKARWKKLTELEKEQEIFERMEARENAIAREEIAQQLAKKAKKSSEK 141
Query: 191 ETLPLPSSRIRSSARSAD--RAAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNTNNRR 250
++ S A + A D+ +E+ A + D K ++A N R+
Sbjct: 142 GVKTEKRRKMNSGGSDAGSPKRKASSDSDSEMDAAFHRPSDINRKHKEKNAMDALKNKRK 201
Query: 251 FSPTKRKPFTAPSL------------SSSSESESRFQSEDEESTGDGGMVDSDDERSMSG 310
K A S+ SSSS SR S ES+ + V D+
Sbjct: 202 EIEKKNAKNEALSIDAVFGANSGSSSSSSSSESSRSSSSSRESSPE--RVSEKDKIVKKD 261
Query: 311 LKGPTFEDIKEITIRRSKLAKWLMEPFFEELIVGCFVRVGIGR-SRSGSIYRLCLVRNVD 370
+ G +++ + R KL+ + PFF+ +VGC+VR+G G+ S SGS YR+ + V+
Sbjct: 262 VDG--LSELRRARLSRHKLSLMIHAPFFDSTVVGCYVRLGQGQMSGSGSKYRIWKIVGVE 321
Query: 371 ATEPDRQYKLENKITHKYLNVIWGNESSAARWQMAMVSDSAPLEDEYKQWLKEVERTNGR 430
E ++ Y+LE K T+K + N S ++M VS++ + E+ +WL +R +G
Sbjct: 322 --ESNKVYELEGKKTNKIIKC--QNGGSERPFRMQFVSNADFEQIEFDEWLLACKR-HGN 381
Query: 431 MLSRQDVLEKKEAIQKANNFVYSAATVKQMLRDKKSASSRPLNIAAEKDRLRREMDVALS 490
+ + + +KK+ I+KA N YS V M+++K + P N A K ++ ++A
Sbjct: 382 LPTVDIMDKKKQDIEKAINHKYSDKEVDLMIKEKSKYQTVPRNFAMTKANWSKQKELAQQ 441
Query: 491 KNDESEVERIKARLQQLEAS----RRLQMKDTKAIRLVEMNRKNRVENFKNASELRPLKD 550
+ D E E+I+ ++ ++E + + K AI + ++++++ + +L+ ++
Sbjct: 442 RGDIREAEQIQTKIDEIERQADELEKERSKSISAIAFINHRNRSKIKDQVLSGQLKIEEN 501
Query: 551 LKAGEAGYDPFSRRWTRSRNYYVGNAGEANGAAEAGGNSDNAMPASETNRTGSGRTAEAG 610
+ DPF+R+ R G+ +G A +S TN + G+ +
Sbjct: 502 SQD-----DPFTRKKGGMR-VVSGSKSRLDGTLSAS--------SSTTNLSDGGKDKSSS 561
Query: 611 MAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFELPISLAVLQKFGGP 639
+A + + T+ +SLH+F+L I L L+ F P
Sbjct: 562 LAKPTQP-----------PPSTQIKKKTDISSLHDFDLDIDLGKLKDFSTP 570
BLAST of CmaCh04G007870 vs. TrEMBL
Match:
A0A0A0KXW1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G038650 PE=4 SV=1)
HSP 1 Score: 1133.6 bits (2931), Expect = 0.0e+00
Identity = 609/660 (92.27%), Postives = 633/660 (95.91%), Query Frame = 1
Query: 27 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 86
MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS
Sbjct: 1 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
Query: 87 GSQVPLKKRLDPAERDDDAGSQEEGDNEDVGSDREGDSSNESDVGDDLYKDDDDRRKLAG 146
GSQVPLKKRLDP ERDDD GSQEEG++EDVGS+REGDSS+ESDVGDDLYKDDDDRRKLAG
Sbjct: 61 GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
Query: 147 MSELQREMILSDRASKKNDKHLYESLRAKKDKGKTAPSRKETLPLPSSRIRSSARSADRA 206
MSELQREMILSDRASKKNDKHLYESLRAK DKGK+APSRKET PLPSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180
Query: 207 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNTNNRRFSPTKRKPFTAPSLSSSS--ES 266
AAKDDALNELRAKRLKQQDPEAHRKLRDASRGN N+RRFSPTKRKPFTAPSLSSSS ES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240
Query: 267 ESRFQSEDEESTGDGGMVDSDDERSMSGLKGPTFEDIKEITIRRSKLAKWLMEPFFEELI 326
ESRFQS+DE STGDGGM+DSDDERS+ G GPTFEDIKE+TIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300
Query: 327 VGCFVRVGIGRSRSGSIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 386
VGCFVRVGIGRSRSG IYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNE+SAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360
Query: 387 MAMVSDSAPLEDEYKQWLKEVERTNGRMLSRQDVLEKKEAIQKANNFVYSAATVKQMLRD 446
MAMVSDSAPLEDEYKQW+KEVERT GRMLS+QD+LEKKEAIQK NNFVYSAATVKQML+D
Sbjct: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420
Query: 447 KKSASSRPLNIAAEKDRLRREMDVALSKNDESEVERIKARLQQLEASRRLQMKDTKAIRL 506
KKSAS+RPLNIAAEKDRLRREMDVA+SKNDE+EVERIK RLQQLEASRRLQMKD KAIRL
Sbjct: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480
Query: 507 VEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVGNAGEANGAAEAGG 566
EMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYV NAGEANGAAEA G
Sbjct: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540
Query: 567 NSDNAMPASETNRTGSGRTAEAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 626
NSDN PA E RT +G T++AGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE
Sbjct: 541 NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600
Query: 627 LPISLAVLQKFGGPMGAQAGFLARKQQIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 685
LPISLA+LQKFGG +GAQAGFLARKQ+IEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660
BLAST of CmaCh04G007870 vs. TrEMBL
Match:
A0A067JDU6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21409 PE=4 SV=1)
HSP 1 Score: 924.9 bits (2389), Expect = 5.9e-266
Identity = 510/661 (77.16%), Postives = 579/661 (87.59%), Query Frame = 1
Query: 27 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 86
MADLENLLLEAAGRT ++GRNR++HPPSRR+REGSYSD GSDSRD+DSDDDRGYASRKPS
Sbjct: 1 MADLENLLLEAAGRTGSSGRNRNAHPPSRRRREGSYSDGGSDSRDEDSDDDRGYASRKPS 60
Query: 87 GSQVPLKKRLDPAERDDDAGSQEEGDNEDVGSDREGDSSNESDVGDDLYKDDDDRRKLAG 146
GSQVPLKKRLDPAERDDD GSQEEG +D SDREGDSS+ESDVGDDLYKD+DDRRKLA
Sbjct: 61 GSQVPLKKRLDPAERDDDQGSQEEGGYDDGASDREGDSSDESDVGDDLYKDEDDRRKLAQ 120
Query: 147 MSELQREMILSDRASKKNDKHLYESLRAKKDKGKTAPSRKETLPLPSSR-IRSSARSADR 206
MSEL+REMILS+RA KK DK+L E +R+K+D + SRKET PLPSSR +R+SARSADR
Sbjct: 121 MSELEREMILSERADKKGDKNLTERIRSKRDSERATRSRKETPPLPSSRGVRTSARSADR 180
Query: 207 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNTNNRRFSPTKRKPFTAPSL-SSSSES 266
AAAKDDALNELRAKRLKQQDPEAHRKLRD SRG + +R SP +RK FT+ SL SSSSES
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDVSRGTSGSRGVSPVRRKRFTSASLSSSSSES 240
Query: 267 ESRFQSEDEESTGDGGMVDSDDERSMSGLKGPTFEDIKEITIRRSKLAKWLMEPFFEELI 326
+SR SEDE STGDGGM DSD++R G +G T++DI+E+TIRRSKLAKWLMEP+FEELI
Sbjct: 241 DSRSHSEDEASTGDGGMADSDEDRE-PGSEGLTYDDIREVTIRRSKLAKWLMEPWFEELI 300
Query: 327 VGCFVRVGIGRSRSGSIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 386
VGCFVRVGIGRS+SG IYRLCLVRNVDA +PDR YKLENK T+KYLNVIWGNESSAARWQ
Sbjct: 301 VGCFVRVGIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAARWQ 360
Query: 387 MAMVSDSAPLEDEYKQWLKEVERTNGRMLSRQDVLEKKEAIQKANNFVYSAATVKQMLRD 446
MAMVSDSAP EDEYKQW++EVER+ GRM ++QD+LEKKEAI+K+N FVYSAATVKQML++
Sbjct: 361 MAMVSDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIKKSNTFVYSAATVKQMLQE 420
Query: 447 KKSASSRPLNIAAEKDRLRREMDVALSKNDESEVERIKARLQQLEASRRLQMKDTKAIRL 506
KKSAS+RPLN+AAEKDRLRRE++VA K D++EVERI+AR+Q+LEASR+ Q KD KAIRL
Sbjct: 421 KKSASTRPLNVAAEKDRLRRELEVAQMKQDDAEVERIRARIQELEASRQAQEKDAKAIRL 480
Query: 507 VEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVGNAGEANGAAEAG 566
EMNRKNR ENF+NASEL+P+ LKAGEAGYDPFSRRWTRSRNYYV G A+ AAEA
Sbjct: 481 AEMNRKNRAENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPGGADVAAEAN 540
Query: 567 GNSDNAMPASETNRTGSGRTAEAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNF 626
N A+ + +N +G AEAGMAATAAALEAAA AGKLVDT APVD GTESN+LH+F
Sbjct: 541 NNGTAAV--AHSNGAATGTLAEAGMAATAAALEAAADAGKLVDTAAPVDQGTESNTLHDF 600
Query: 627 ELPISLAVLQKFGGPMGAQAGFLARKQQIEATVGRQVPENDGRRHALTLTVSDYKRRRGL 685
+LPISL L+KFGG GA+AGF+ARKQQIEATVG +VPENDGRRHALTLTVSDYKRRRGL
Sbjct: 601 DLPISLTALEKFGGAKGAKAGFMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRRGL 658
BLAST of CmaCh04G007870 vs. TrEMBL
Match:
W9RDA9_9ROSA (RNA polymerase-associated protein RTF1-like protein OS=Morus notabilis GN=L484_012115 PE=4 SV=1)
HSP 1 Score: 918.7 bits (2373), Expect = 4.2e-264
Identity = 513/662 (77.49%), Postives = 570/662 (86.10%), Query Frame = 1
Query: 27 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 86
MA+LENLLLEAAGRT +AGRNRHS PPSRR+REGSYSD GSDSRDDDSDDDRGYA+RKPS
Sbjct: 1 MAELENLLLEAAGRTRSAGRNRHSIPPSRRRREGSYSDGGSDSRDDDSDDDRGYANRKPS 60
Query: 87 GSQVPLKKRLDPAERDDDAGSQEEGDNEDVGSDREGDSSNESDVGDDLYKDDDDRRKLAG 146
GSQVPLKKRLDP E DDD GS+EEGD +D GSDREGDS ESDVG DLYKDDDDRRKLA
Sbjct: 61 GSQVPLKKRLDPTEMDDDQGSEEEGD-DDRGSDREGDS--ESDVGSDLYKDDDDRRKLAE 120
Query: 147 MSELQREMILSDRASKKNDKHLYESLRAKKD-KGKTAPSRKETLPLPSSRIRSSARSADR 206
M+ELQREMIL DRASKK DK+L E LR K D KGK SRKET PLPSSR+RSSARSADR
Sbjct: 121 MTELQREMILLDRASKKEDKNLKEKLRPKWDNKGKATQSRKET-PLPSSRVRSSARSADR 180
Query: 207 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNTNNRRFSPTKRKPFTAPSLSSSSES- 266
AAAKDDALNELRAKRLKQQDPEAH KLRDASRG + +R KRK +TA SLSSSS+S
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHGKLRDASRGGSGSRNLLHNKRKSYTATSLSSSSQSD 240
Query: 267 -ESRFQSEDEESTGDGGMVDSDDERSMSGLKGPTFEDIKEITIRRSKLAKWLMEPFFEEL 326
ES QSEDE STGDGGM+DSDDER + G +G TF+DIKE+T+RRSKLAKWLMEPFFEEL
Sbjct: 241 SESESQSEDEGSTGDGGMIDSDDERGIPGSEGLTFDDIKEVTVRRSKLAKWLMEPFFEEL 300
Query: 327 IVGCFVRVGIGRSRSGSIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARW 386
IVGCFVRVGIGRS+SG IYRLC+VRNVDA+EPDRQYKL+NKITHKYLNV+WGNE+SAARW
Sbjct: 301 IVGCFVRVGIGRSKSGPIYRLCMVRNVDASEPDRQYKLDNKITHKYLNVVWGNENSAARW 360
Query: 387 QMAMVSDSAPLEDEYKQWLKEVERTNGRMLSRQDVLEKKEAIQKANNFVYSAATVKQMLR 446
QMAMVSDS P E+E+KQW++EVER+ GRM ++ D+L+KKE+I+K N FVYSAATVKQML+
Sbjct: 361 QMAMVSDSVPNEEEFKQWVREVERSGGRMPTKHDILDKKESIKKINTFVYSAATVKQMLQ 420
Query: 447 DKKSASSRPLNIAAEKDRLRREMDVALSKNDESEVERIKARLQQLEASRRLQMKDTKAIR 506
+KKSAS+RPLNIA EKDRLRRE++VA SKNDE EV+RIK RLQ+LEASR+ + D KAIR
Sbjct: 421 EKKSASARPLNIALEKDRLRRELEVAQSKNDEVEVDRIKTRLQELEASRKAKQTDAKAIR 480
Query: 507 LVEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVGNAGEANGAAEA 566
L EMNRKNRVENFKNASEL+P+ LKAGEAGYDPFSRRWTRSRNYYVG GE + A
Sbjct: 481 LAEMNRKNRVENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVGKPGEVKEDSGA 540
Query: 567 GGNSDNAMPASETNRTGSGRTAEAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHN 626
++ A +E N AEAG+AAT AALEAAA AGKLVDTNAPVD GT SN LHN
Sbjct: 541 NAGNNGASTDAENNGRHGIVAAEAGIAATEAALEAAADAGKLVDTNAPVDQGTVSNMLHN 600
Query: 627 FELPISLAVLQKFGGPMGAQAGFLARKQQIEATVGRQVPENDGRRHALTLTVSDYKRRRG 685
FELPISL+VLQKFGGP GAQAGF+ARKQ+IEATVG +VPENDGRRHALTL+V DYKRRRG
Sbjct: 601 FELPISLSVLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLSVGDYKRRRG 658
BLAST of CmaCh04G007870 vs. TrEMBL
Match:
A0A0D2T1B1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G025800 PE=4 SV=1)
HSP 1 Score: 917.1 bits (2369), Expect = 1.2e-263
Identity = 506/661 (76.55%), Postives = 572/661 (86.54%), Query Frame = 1
Query: 27 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 86
MADLENLLLEAAGRT GRNRHS PPSRR+REGSYSD GSDSRDDDSDDD GYASRKPS
Sbjct: 1 MADLENLLLEAAGRTGTGGRNRHSLPPSRRRREGSYSDGGSDSRDDDSDDDHGYASRKPS 60
Query: 87 GSQVPLKKRLDPAERDDDAGSQEEGDNEDVGSDREGDSSNESDVGDDLYKDDDDRRKLAG 146
GSQVPLKKRLDPAERDDD GSQEEGD D GS RE DSS+ESDVGDDLYK+++DRR+LA
Sbjct: 61 GSQVPLKKRLDPAERDDDQGSQEEGDYNDAGSGRERDSSDESDVGDDLYKNEEDRRQLAQ 120
Query: 147 MSELQREMILSDRASKKNDKHLYESLRAKKDKGKTAPSRKETLPLPSSRIRSSARSADRA 206
++EL+REMILS+RA K+ DK E +R+K++ + + S++ET PLPS +RSSARSADRA
Sbjct: 121 LTELEREMILSERADKRGDKKFTEKIRSKRENDRPSRSQRETPPLPSRGVRSSARSADRA 180
Query: 207 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNTNNRRFSPTKRKPFTAPSLSSSS--ES 266
AAKDDALNELRAKRLKQQDPEAHRKLRDASRG++ NR SP KRKPFTA SLSSSS ES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGNRGLSPVKRKPFTASSLSSSSQSES 240
Query: 267 ESRFQSEDEESTGDGGMVDSDDERSMSGLKGPTFEDIKEITIRRSKLAKWLMEPFFEELI 326
ESR SEDE STGDGGMVDS+DER G GPTF DIKEITIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRSNSEDEGSTGDGGMVDSEDERGTWGPNGPTFNDIKEITIRRSKLAKWLMEPFFEELI 300
Query: 327 VGCFVRVGIGRSRSGSIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 386
VGCFVRVGIGRS++G+IYRLC+VRNVDAT+PDR YKLENK T+KYLNV+WGNESSAARWQ
Sbjct: 301 VGCFVRVGIGRSKTGAIYRLCMVRNVDATDPDRTYKLENKTTYKYLNVVWGNESSAARWQ 360
Query: 387 MAMVSDSAPLEDEYKQWLKEVERTNGRMLSRQDVLEKKEAIQKANNFVYSAATVKQMLRD 446
MAM+SDS PLE+E++Q ++EVER+ GRM S+QDVLEKKEA+QKA FVYSAATVKQML++
Sbjct: 361 MAMISDSPPLEEEFRQLIREVERSGGRMPSKQDVLEKKEALQKAKTFVYSAATVKQMLQE 420
Query: 447 KKSASSRPLNIAAEKDRLRREMDVALSKNDESEVERIKARLQQLEASRRLQMKDTKAIRL 506
KKS+SSRPLN+AAEKDRLRR++++A SK+D+ EVERIK RLQQLEASR+ Q KD KA+RL
Sbjct: 421 KKSSSSRPLNVAAEKDRLRRDLEIAQSKHDDVEVERIKKRLQQLEASRQSQEKDAKAVRL 480
Query: 507 VEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVGNAGEANGAAEAG 566
EMNRKNRVENFKNAS L+P+ LKAGEAGYDPFSRRWTRSRNYY A + AA A
Sbjct: 481 AEMNRKNRVENFKNASGLKPVNTGLKAGEAGYDPFSRRWTRSRNYYNAKAPGGDAAAVAN 540
Query: 567 GNSDNAMPASETNRTGSGRTAEAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNF 626
G+++ A+ + N G+ AEAG AATAAAL+ AAGAGKLVDTNAPVD GTESN LH+F
Sbjct: 541 GDTNGAIGSGNGNDAGAA-AAEAGRAATAAALQEAAGAGKLVDTNAPVDEGTESNMLHDF 600
Query: 627 ELPISLAVLQKFGGPMGAQAGFLARKQQIEATVGRQVPENDGRRHALTLTVSDYKRRRGL 685
ELPISL VL+KFGG GA AGF+ARKQ+IEATVG +VPENDGRRHALTLTVSDYKRRRGL
Sbjct: 601 ELPISLDVLRKFGGHEGAVAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGL 660
BLAST of CmaCh04G007870 vs. TrEMBL
Match:
A0A061GFX4_THECC (PAF1 complex component isoform 1 OS=Theobroma cacao GN=TCM_029914 PE=4 SV=1)
HSP 1 Score: 915.2 bits (2364), Expect = 4.7e-263
Identity = 507/662 (76.59%), Postives = 568/662 (85.80%), Query Frame = 1
Query: 27 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 86
MADLENLLLEAAGRT GRNRHS PPSRR+REGSYSD GSDSRDDDSDDD GYASRKPS
Sbjct: 1 MADLENLLLEAAGRTGTGGRNRHSLPPSRRRREGSYSDGGSDSRDDDSDDDHGYASRKPS 60
Query: 87 GSQVPLKKRLDPAERDDDAGSQEEGDNEDVGSDREGDSSNESDVGDDLYKDDDDRRKLAG 146
GSQVPLKKRLDPAERDDD GSQEEGD +D S EGDSS+ESDVGDDLYK++DDRRKLA
Sbjct: 61 GSQVPLKKRLDPAERDDDQGSQEEGDYDDGVSVHEGDSSDESDVGDDLYKNEDDRRKLAQ 120
Query: 147 MSELQREMILSDRASKKNDKHLYESLRAKKDKGKTAPSRKETLPLPSSR-IRSSARSADR 206
M+EL+RE+ILS+RA K+ DK E +R+K++ + + SRKET PLPSSR +RSSARSADR
Sbjct: 121 MTELERELILSERADKRGDKKFTEKIRSKRENDRPSRSRKETPPLPSSRGVRSSARSADR 180
Query: 207 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNTNNRRFSPTKRKPFTAPSLSSSSES- 266
AAAKDDALNELRAKRLKQQDPEAHRKLRDASRG++ +R SP KRKPFTA SLSSSS+S
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGSRGLSPVKRKPFTASSLSSSSQSD 240
Query: 267 -ESRFQSEDEESTGDGGMVDSDDERSMSGLKGPTFEDIKEITIRRSKLAKWLMEPFFEEL 326
ESR SEDE STGDGGMVDSDD+R M G GPTF+DIKEITIRRSKLAKW MEPFFEEL
Sbjct: 241 SESRSNSEDEGSTGDGGMVDSDDDRGMQGPDGPTFDDIKEITIRRSKLAKWFMEPFFEEL 300
Query: 327 IVGCFVRVGIGRSRSGSIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARW 386
IVGC+VRVGIGRS+SG IYRLC+VRNVDATEP+R YKLENK T+KYLNV+WGNESSAARW
Sbjct: 301 IVGCYVRVGIGRSKSGPIYRLCMVRNVDATEPERTYKLENKTTYKYLNVVWGNESSAARW 360
Query: 387 QMAMVSDSAPLEDEYKQWLKEVERTNGRMLSRQDVLEKKEAIQKANNFVYSAATVKQMLR 446
QMAM+SDS P E+E++Q ++E+ER+ GRM S+QDVLEKKEA+QKA FVYSAATVKQML+
Sbjct: 361 QMAMISDSPPQEEEFRQLIRELERSGGRMPSKQDVLEKKEALQKAKTFVYSAATVKQMLQ 420
Query: 447 DKKSASSRPLNIAAEKDRLRREMDVALSKNDESEVERIKARLQQLEASRRLQMKDTKAIR 506
+KKS SSRPLNIAAEKDRLRR++++A SK+DE+EVERIK RLQQLEASR+ Q KD KA+R
Sbjct: 421 EKKSTSSRPLNIAAEKDRLRRDLEIAQSKHDEAEVERIKMRLQQLEASRQAQEKDAKAVR 480
Query: 507 LVEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVGNAGEANGAAEA 566
L EMNRKNR ENFKNASEL+P+ LKAGEAGYDPFSRRWTRSRNYYV A+ AA A
Sbjct: 481 LAEMNRKNRAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVAKPPGADAAAVA 540
Query: 567 GGNSDNAMPASETNRTGSGRTAEAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHN 626
N D + N + AEAG AAT AAL+ AAGAGKLVDT+APVD GTESN LH+
Sbjct: 541 --NGDRIGVIASGNGNDARAAAEAGRAATVAALQEAAGAGKLVDTSAPVDEGTESNMLHD 600
Query: 627 FELPISLAVLQKFGGPMGAQAGFLARKQQIEATVGRQVPENDGRRHALTLTVSDYKRRRG 685
FE+PISL LQ+FGGP GA AGF+ARKQ+IEATVG QVPENDGRRHALTLTVSDYKRRRG
Sbjct: 601 FEIPISLNALQRFGGPQGAVAGFMARKQRIEATVGCQVPENDGRRHALTLTVSDYKRRRG 660
BLAST of CmaCh04G007870 vs. TAIR10
Match:
AT1G61040.1 (AT1G61040.1 plus-3 domain-containing protein)
HSP 1 Score: 803.5 bits (2074), Expect = 1.0e-232
Identity = 457/664 (68.83%), Postives = 540/664 (81.33%), Query Frame = 1
Query: 27 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 86
M DLENLLLEAAGRTN+AGR+RH PPS R+REGSYSD SDSRDD SD+DRGYASRKPS
Sbjct: 1 MGDLENLLLEAAGRTNSAGRSRH--PPSSRRREGSYSDGSSDSRDD-SDEDRGYASRKPS 60
Query: 87 GSQVPLKKRLDPAERDDDAGSQEEGDNEDVGSDREGDSSNESDVGDDLYKDDDDRRKLAG 146
GSQVPLKKRL+ AER+D A ++ EG D SDREGDSS ESD GDDLYK+++DR+KLAG
Sbjct: 61 GSQVPLKKRLE-AEREDRA-ARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAG 120
Query: 147 MSELQREMILSDRASKKNDKHLYESLRAKKDKGKTAPSRKETLPLPSSR-IRSSARSADR 206
M+E QREMILS+RA KK DK+ E LR+K++ KT S+KET PLP+SR +RSSARSADR
Sbjct: 121 MTEFQREMILSERADKKGDKNFTEKLRSKRESEKTPVSKKETQPLPASRGVRSSARSADR 180
Query: 207 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNTNNRRFSPTKRKPFTAPSLSSSSESE 266
AAAKDDALNELRAKR+KQQDP A RKLRDAS+G + +R FS TKRKP + +LSSSS+S+
Sbjct: 181 AAAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSTKRKPLASSNLSSSSQSD 240
Query: 267 SRFQSEDEESTGDGGMVDSDDERSMSGLKGPTFEDIKEITIRRSKLAKWLMEPFFEELIV 326
S +S+ ++ +GGM+DSDD+RS PTFED+KE+TIRRSKLAKWLMEPFFEELIV
Sbjct: 241 SDSRSQSDDEGSNGGMLDSDDDRS----DVPTFEDVKEVTIRRSKLAKWLMEPFFEELIV 300
Query: 327 GCFVRVGIGRSRSGSIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQM 386
GCFVRVGIGRS+SG IYRLC V+NVDAT+PD+ YKLENK THKYLNV+WGNE+SAARWQM
Sbjct: 301 GCFVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARWQM 360
Query: 387 AMVSDSAPLEDEYKQWLKEVERTNGRMLSRQDVLEKKEAIQKANNFVYSAATVKQMLRDK 446
AM+SD PLE+EY+QW++EVERTNGRM ++QD+ EKKEAIQ+ N+FVYSA TVKQML++K
Sbjct: 361 AMISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRTNSFVYSAETVKQMLQEK 420
Query: 447 KSASSRPLNIAAEKDRLRREMDVALSKNDESEVERIKARLQQLEASRRLQMKDTKAIRLV 506
KSAS RP+N+AAEKDRLR+E+++A SKNDE+ VERIK++++QL+ASR + D KA++L
Sbjct: 421 KSASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKSKIKQLDASRNKKGVDKKALKLA 480
Query: 507 EMNRKNRVENFKNASELRPL-KDLKAGEAGYDPFSRRWTRSRNYY----VGNAGEANGAA 566
EMN+KNR ENFKNASE++ + LKAGEAGYDPFSRRWTRS NYY G GE N AA
Sbjct: 481 EMNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYYNGKNKGKDGEENEAA 540
Query: 567 EAGGNSDNAMPASETNRTGSGRTAEAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSL 626
A A ETN G A AG+ AT AALEAAA AGKL+DT AP+ G E N L
Sbjct: 541 VAA--------AVETN----GADAGAGVEATEAALEAAAEAGKLIDTRAPIGQGAEHNQL 600
Query: 627 HNFELPISLAVLQKFGGPMGAQAGFLARKQQIEATVGRQVPENDGRRHALTLTVSDYKRR 685
HNFEL +SL LQK+GGP G Q F+ARKQ EATVG +V ENDG+RH LTLTVSDYKRR
Sbjct: 601 HNFELSLSLTALQKYGGPQGVQKAFMARKQLTEATVGCRVAENDGKRHGLTLTVSDYKRR 643
BLAST of CmaCh04G007870 vs. NCBI nr
Match:
gi|449462844|ref|XP_004149150.1| (PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis sativus])
HSP 1 Score: 1133.6 bits (2931), Expect = 0.0e+00
Identity = 609/660 (92.27%), Postives = 633/660 (95.91%), Query Frame = 1
Query: 27 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 86
MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS
Sbjct: 1 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
Query: 87 GSQVPLKKRLDPAERDDDAGSQEEGDNEDVGSDREGDSSNESDVGDDLYKDDDDRRKLAG 146
GSQVPLKKRLDP ERDDD GSQEEG++EDVGS+REGDSS+ESDVGDDLYKDDDDRRKLAG
Sbjct: 61 GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
Query: 147 MSELQREMILSDRASKKNDKHLYESLRAKKDKGKTAPSRKETLPLPSSRIRSSARSADRA 206
MSELQREMILSDRASKKNDKHLYESLRAK DKGK+APSRKET PLPSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180
Query: 207 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNTNNRRFSPTKRKPFTAPSLSSSS--ES 266
AAKDDALNELRAKRLKQQDPEAHRKLRDASRGN N+RRFSPTKRKPFTAPSLSSSS ES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240
Query: 267 ESRFQSEDEESTGDGGMVDSDDERSMSGLKGPTFEDIKEITIRRSKLAKWLMEPFFEELI 326
ESRFQS+DE STGDGGM+DSDDERS+ G GPTFEDIKE+TIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300
Query: 327 VGCFVRVGIGRSRSGSIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 386
VGCFVRVGIGRSRSG IYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNE+SAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360
Query: 387 MAMVSDSAPLEDEYKQWLKEVERTNGRMLSRQDVLEKKEAIQKANNFVYSAATVKQMLRD 446
MAMVSDSAPLEDEYKQW+KEVERT GRMLS+QD+LEKKEAIQK NNFVYSAATVKQML+D
Sbjct: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420
Query: 447 KKSASSRPLNIAAEKDRLRREMDVALSKNDESEVERIKARLQQLEASRRLQMKDTKAIRL 506
KKSAS+RPLNIAAEKDRLRREMDVA+SKNDE+EVERIK RLQQLEASRRLQMKD KAIRL
Sbjct: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480
Query: 507 VEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVGNAGEANGAAEAGG 566
EMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYV NAGEANGAAEA G
Sbjct: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540
Query: 567 NSDNAMPASETNRTGSGRTAEAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 626
NSDN PA E RT +G T++AGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE
Sbjct: 541 NSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600
Query: 627 LPISLAVLQKFGGPMGAQAGFLARKQQIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 685
LPISLA+LQKFGG +GAQAGFLARKQ+IEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660
BLAST of CmaCh04G007870 vs. NCBI nr
Match:
gi|659107572|ref|XP_008453742.1| (PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis melo])
HSP 1 Score: 1128.2 bits (2917), Expect = 0.0e+00
Identity = 607/660 (91.97%), Postives = 630/660 (95.45%), Query Frame = 1
Query: 27 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 86
MADLENLLLEAAGRTNA G NRHSHPPSRRQREGSYSD GSDSRDDDSDD+RGYASRKPS
Sbjct: 1 MADLENLLLEAAGRTNAGGGNRHSHPPSRRQREGSYSDGGSDSRDDDSDDERGYASRKPS 60
Query: 87 GSQVPLKKRLDPAERDDDAGSQEEGDNEDVGSDREGDSSNESDVGDDLYKDDDDRRKLAG 146
GSQVPLKKRLDP ERDDD GS EEG++EDVGS+ EGDSS+ESDVGDDLYKDDDDRRKLAG
Sbjct: 61 GSQVPLKKRLDPTERDDDGGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 120
Query: 147 MSELQREMILSDRASKKNDKHLYESLRAKKDKGKTAPSRKETLPLPSSRIRSSARSADRA 206
MSELQREMILSDRASKKNDKHLYESLRAK DKGKTAPSRKET PLPSSRIRSSARSADRA
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKTAPSRKETPPLPSSRIRSSARSADRA 180
Query: 207 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNTNNRRFSPTKRKPFTAPSLSSSS--ES 266
AAKDDALNELRAKRLKQQDPEAHRKLRDASRGN+NNRRFSPTKRKPFTAPSLSSSS ES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNSNNRRFSPTKRKPFTAPSLSSSSQSES 240
Query: 267 ESRFQSEDEESTGDGGMVDSDDERSMSGLKGPTFEDIKEITIRRSKLAKWLMEPFFEELI 326
ESRFQS+DE STGDGGM+DSDDERSM G GPTFEDIKEITIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERSMPGSDGPTFEDIKEITIRRSKLAKWLMEPFFEELI 300
Query: 327 VGCFVRVGIGRSRSGSIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 386
VGCFVRVGIGRSRSG IYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNE+SAARWQ
Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNENSAARWQ 360
Query: 387 MAMVSDSAPLEDEYKQWLKEVERTNGRMLSRQDVLEKKEAIQKANNFVYSAATVKQMLRD 446
MAMVSDSAPLEDEYKQW+KEVERT GRMLS+QDVLEKK+AIQK NNFVYSAATVKQML+D
Sbjct: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDVLEKKDAIQKVNNFVYSAATVKQMLQD 420
Query: 447 KKSASSRPLNIAAEKDRLRREMDVALSKNDESEVERIKARLQQLEASRRLQMKDTKAIRL 506
KKSAS+RPLNIAAEKDRLRREMDVA+SKNDE+EVERIK RLQQLEASRRLQMKD KAIRL
Sbjct: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKGRLQQLEASRRLQMKDAKAIRL 480
Query: 507 VEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVGNAGEANGAAEAGG 566
EMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYV NAGEANGAAEA G
Sbjct: 481 AEMNRKNRVENFKNASELRPLKDLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAAG 540
Query: 567 NSDNAMPASETNRTGSGRTAEAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 626
NSD PA E+ RTG+G T++AGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE
Sbjct: 541 NSDTVTPALESTRTGAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNFE 600
Query: 627 LPISLAVLQKFGGPMGAQAGFLARKQQIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 685
LPISLA+LQKFGG +GAQAGFLARKQ+IEATVGRQVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601 LPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660
BLAST of CmaCh04G007870 vs. NCBI nr
Match:
gi|802784101|ref|XP_012091565.1| (PREDICTED: RNA polymerase-associated protein RTF1 homolog [Jatropha curcas])
HSP 1 Score: 924.9 bits (2389), Expect = 8.4e-266
Identity = 510/661 (77.16%), Postives = 579/661 (87.59%), Query Frame = 1
Query: 27 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 86
MADLENLLLEAAGRT ++GRNR++HPPSRR+REGSYSD GSDSRD+DSDDDRGYASRKPS
Sbjct: 1 MADLENLLLEAAGRTGSSGRNRNAHPPSRRRREGSYSDGGSDSRDEDSDDDRGYASRKPS 60
Query: 87 GSQVPLKKRLDPAERDDDAGSQEEGDNEDVGSDREGDSSNESDVGDDLYKDDDDRRKLAG 146
GSQVPLKKRLDPAERDDD GSQEEG +D SDREGDSS+ESDVGDDLYKD+DDRRKLA
Sbjct: 61 GSQVPLKKRLDPAERDDDQGSQEEGGYDDGASDREGDSSDESDVGDDLYKDEDDRRKLAQ 120
Query: 147 MSELQREMILSDRASKKNDKHLYESLRAKKDKGKTAPSRKETLPLPSSR-IRSSARSADR 206
MSEL+REMILS+RA KK DK+L E +R+K+D + SRKET PLPSSR +R+SARSADR
Sbjct: 121 MSELEREMILSERADKKGDKNLTERIRSKRDSERATRSRKETPPLPSSRGVRTSARSADR 180
Query: 207 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNTNNRRFSPTKRKPFTAPSL-SSSSES 266
AAAKDDALNELRAKRLKQQDPEAHRKLRD SRG + +R SP +RK FT+ SL SSSSES
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDVSRGTSGSRGVSPVRRKRFTSASLSSSSSES 240
Query: 267 ESRFQSEDEESTGDGGMVDSDDERSMSGLKGPTFEDIKEITIRRSKLAKWLMEPFFEELI 326
+SR SEDE STGDGGM DSD++R G +G T++DI+E+TIRRSKLAKWLMEP+FEELI
Sbjct: 241 DSRSHSEDEASTGDGGMADSDEDRE-PGSEGLTYDDIREVTIRRSKLAKWLMEPWFEELI 300
Query: 327 VGCFVRVGIGRSRSGSIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 386
VGCFVRVGIGRS+SG IYRLCLVRNVDA +PDR YKLENK T+KYLNVIWGNESSAARWQ
Sbjct: 301 VGCFVRVGIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAARWQ 360
Query: 387 MAMVSDSAPLEDEYKQWLKEVERTNGRMLSRQDVLEKKEAIQKANNFVYSAATVKQMLRD 446
MAMVSDSAP EDEYKQW++EVER+ GRM ++QD+LEKKEAI+K+N FVYSAATVKQML++
Sbjct: 361 MAMVSDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIKKSNTFVYSAATVKQMLQE 420
Query: 447 KKSASSRPLNIAAEKDRLRREMDVALSKNDESEVERIKARLQQLEASRRLQMKDTKAIRL 506
KKSAS+RPLN+AAEKDRLRRE++VA K D++EVERI+AR+Q+LEASR+ Q KD KAIRL
Sbjct: 421 KKSASTRPLNVAAEKDRLRRELEVAQMKQDDAEVERIRARIQELEASRQAQEKDAKAIRL 480
Query: 507 VEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVGNAGEANGAAEAG 566
EMNRKNR ENF+NASEL+P+ LKAGEAGYDPFSRRWTRSRNYYV G A+ AAEA
Sbjct: 481 AEMNRKNRAENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPGGADVAAEAN 540
Query: 567 GNSDNAMPASETNRTGSGRTAEAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNF 626
N A+ + +N +G AEAGMAATAAALEAAA AGKLVDT APVD GTESN+LH+F
Sbjct: 541 NNGTAAV--AHSNGAATGTLAEAGMAATAAALEAAADAGKLVDTAAPVDQGTESNTLHDF 600
Query: 627 ELPISLAVLQKFGGPMGAQAGFLARKQQIEATVGRQVPENDGRRHALTLTVSDYKRRRGL 685
+LPISL L+KFGG GA+AGF+ARKQQIEATVG +VPENDGRRHALTLTVSDYKRRRGL
Sbjct: 601 DLPISLTALEKFGGAKGAKAGFMARKQQIEATVGCRVPENDGRRHALTLTVSDYKRRRGL 658
BLAST of CmaCh04G007870 vs. NCBI nr
Match:
gi|703114113|ref|XP_010100559.1| (RNA polymerase-associated protein RTF1-like protein [Morus notabilis])
HSP 1 Score: 918.7 bits (2373), Expect = 6.0e-264
Identity = 513/662 (77.49%), Postives = 570/662 (86.10%), Query Frame = 1
Query: 27 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 86
MA+LENLLLEAAGRT +AGRNRHS PPSRR+REGSYSD GSDSRDDDSDDDRGYA+RKPS
Sbjct: 1 MAELENLLLEAAGRTRSAGRNRHSIPPSRRRREGSYSDGGSDSRDDDSDDDRGYANRKPS 60
Query: 87 GSQVPLKKRLDPAERDDDAGSQEEGDNEDVGSDREGDSSNESDVGDDLYKDDDDRRKLAG 146
GSQVPLKKRLDP E DDD GS+EEGD +D GSDREGDS ESDVG DLYKDDDDRRKLA
Sbjct: 61 GSQVPLKKRLDPTEMDDDQGSEEEGD-DDRGSDREGDS--ESDVGSDLYKDDDDRRKLAE 120
Query: 147 MSELQREMILSDRASKKNDKHLYESLRAKKD-KGKTAPSRKETLPLPSSRIRSSARSADR 206
M+ELQREMIL DRASKK DK+L E LR K D KGK SRKET PLPSSR+RSSARSADR
Sbjct: 121 MTELQREMILLDRASKKEDKNLKEKLRPKWDNKGKATQSRKET-PLPSSRVRSSARSADR 180
Query: 207 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNTNNRRFSPTKRKPFTAPSLSSSSES- 266
AAAKDDALNELRAKRLKQQDPEAH KLRDASRG + +R KRK +TA SLSSSS+S
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHGKLRDASRGGSGSRNLLHNKRKSYTATSLSSSSQSD 240
Query: 267 -ESRFQSEDEESTGDGGMVDSDDERSMSGLKGPTFEDIKEITIRRSKLAKWLMEPFFEEL 326
ES QSEDE STGDGGM+DSDDER + G +G TF+DIKE+T+RRSKLAKWLMEPFFEEL
Sbjct: 241 SESESQSEDEGSTGDGGMIDSDDERGIPGSEGLTFDDIKEVTVRRSKLAKWLMEPFFEEL 300
Query: 327 IVGCFVRVGIGRSRSGSIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARW 386
IVGCFVRVGIGRS+SG IYRLC+VRNVDA+EPDRQYKL+NKITHKYLNV+WGNE+SAARW
Sbjct: 301 IVGCFVRVGIGRSKSGPIYRLCMVRNVDASEPDRQYKLDNKITHKYLNVVWGNENSAARW 360
Query: 387 QMAMVSDSAPLEDEYKQWLKEVERTNGRMLSRQDVLEKKEAIQKANNFVYSAATVKQMLR 446
QMAMVSDS P E+E+KQW++EVER+ GRM ++ D+L+KKE+I+K N FVYSAATVKQML+
Sbjct: 361 QMAMVSDSVPNEEEFKQWVREVERSGGRMPTKHDILDKKESIKKINTFVYSAATVKQMLQ 420
Query: 447 DKKSASSRPLNIAAEKDRLRREMDVALSKNDESEVERIKARLQQLEASRRLQMKDTKAIR 506
+KKSAS+RPLNIA EKDRLRRE++VA SKNDE EV+RIK RLQ+LEASR+ + D KAIR
Sbjct: 421 EKKSASARPLNIALEKDRLRRELEVAQSKNDEVEVDRIKTRLQELEASRKAKQTDAKAIR 480
Query: 507 LVEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVGNAGEANGAAEA 566
L EMNRKNRVENFKNASEL+P+ LKAGEAGYDPFSRRWTRSRNYYVG GE + A
Sbjct: 481 LAEMNRKNRVENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVGKPGEVKEDSGA 540
Query: 567 GGNSDNAMPASETNRTGSGRTAEAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHN 626
++ A +E N AEAG+AAT AALEAAA AGKLVDTNAPVD GT SN LHN
Sbjct: 541 NAGNNGASTDAENNGRHGIVAAEAGIAATEAALEAAADAGKLVDTNAPVDQGTVSNMLHN 600
Query: 627 FELPISLAVLQKFGGPMGAQAGFLARKQQIEATVGRQVPENDGRRHALTLTVSDYKRRRG 685
FELPISL+VLQKFGGP GAQAGF+ARKQ+IEATVG +VPENDGRRHALTL+V DYKRRRG
Sbjct: 601 FELPISLSVLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLSVGDYKRRRG 658
BLAST of CmaCh04G007870 vs. NCBI nr
Match:
gi|823245417|ref|XP_012455370.1| (PREDICTED: RNA polymerase-associated protein RTF1 homolog [Gossypium raimondii])
HSP 1 Score: 917.1 bits (2369), Expect = 1.8e-263
Identity = 506/661 (76.55%), Postives = 572/661 (86.54%), Query Frame = 1
Query: 27 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 86
MADLENLLLEAAGRT GRNRHS PPSRR+REGSYSD GSDSRDDDSDDD GYASRKPS
Sbjct: 1 MADLENLLLEAAGRTGTGGRNRHSLPPSRRRREGSYSDGGSDSRDDDSDDDHGYASRKPS 60
Query: 87 GSQVPLKKRLDPAERDDDAGSQEEGDNEDVGSDREGDSSNESDVGDDLYKDDDDRRKLAG 146
GSQVPLKKRLDPAERDDD GSQEEGD D GS RE DSS+ESDVGDDLYK+++DRR+LA
Sbjct: 61 GSQVPLKKRLDPAERDDDQGSQEEGDYNDAGSGRERDSSDESDVGDDLYKNEEDRRQLAQ 120
Query: 147 MSELQREMILSDRASKKNDKHLYESLRAKKDKGKTAPSRKETLPLPSSRIRSSARSADRA 206
++EL+REMILS+RA K+ DK E +R+K++ + + S++ET PLPS +RSSARSADRA
Sbjct: 121 LTELEREMILSERADKRGDKKFTEKIRSKRENDRPSRSQRETPPLPSRGVRSSARSADRA 180
Query: 207 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNTNNRRFSPTKRKPFTAPSLSSSS--ES 266
AAKDDALNELRAKRLKQQDPEAHRKLRDASRG++ NR SP KRKPFTA SLSSSS ES
Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGNRGLSPVKRKPFTASSLSSSSQSES 240
Query: 267 ESRFQSEDEESTGDGGMVDSDDERSMSGLKGPTFEDIKEITIRRSKLAKWLMEPFFEELI 326
ESR SEDE STGDGGMVDS+DER G GPTF DIKEITIRRSKLAKWLMEPFFEELI
Sbjct: 241 ESRSNSEDEGSTGDGGMVDSEDERGTWGPNGPTFNDIKEITIRRSKLAKWLMEPFFEELI 300
Query: 327 VGCFVRVGIGRSRSGSIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNESSAARWQ 386
VGCFVRVGIGRS++G+IYRLC+VRNVDAT+PDR YKLENK T+KYLNV+WGNESSAARWQ
Sbjct: 301 VGCFVRVGIGRSKTGAIYRLCMVRNVDATDPDRTYKLENKTTYKYLNVVWGNESSAARWQ 360
Query: 387 MAMVSDSAPLEDEYKQWLKEVERTNGRMLSRQDVLEKKEAIQKANNFVYSAATVKQMLRD 446
MAM+SDS PLE+E++Q ++EVER+ GRM S+QDVLEKKEA+QKA FVYSAATVKQML++
Sbjct: 361 MAMISDSPPLEEEFRQLIREVERSGGRMPSKQDVLEKKEALQKAKTFVYSAATVKQMLQE 420
Query: 447 KKSASSRPLNIAAEKDRLRREMDVALSKNDESEVERIKARLQQLEASRRLQMKDTKAIRL 506
KKS+SSRPLN+AAEKDRLRR++++A SK+D+ EVERIK RLQQLEASR+ Q KD KA+RL
Sbjct: 421 KKSSSSRPLNVAAEKDRLRRDLEIAQSKHDDVEVERIKKRLQQLEASRQSQEKDAKAVRL 480
Query: 507 VEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVGNAGEANGAAEAG 566
EMNRKNRVENFKNAS L+P+ LKAGEAGYDPFSRRWTRSRNYY A + AA A
Sbjct: 481 AEMNRKNRVENFKNASGLKPVNTGLKAGEAGYDPFSRRWTRSRNYYNAKAPGGDAAAVAN 540
Query: 567 GNSDNAMPASETNRTGSGRTAEAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNF 626
G+++ A+ + N G+ AEAG AATAAAL+ AAGAGKLVDTNAPVD GTESN LH+F
Sbjct: 541 GDTNGAIGSGNGNDAGAA-AAEAGRAATAAALQEAAGAGKLVDTNAPVDEGTESNMLHDF 600
Query: 627 ELPISLAVLQKFGGPMGAQAGFLARKQQIEATVGRQVPENDGRRHALTLTVSDYKRRRGL 685
ELPISL VL+KFGG GA AGF+ARKQ+IEATVG +VPENDGRRHALTLTVSDYKRRRGL
Sbjct: 601 ELPISLDVLRKFGGHEGAVAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGL 660
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
VIP5_ARATH | 1.8e-231 | 68.83 | Protein RTF1 homolog OS=Arabidopsis thaliana GN=VIP5 PE=1 SV=1 | [more] |
RTF1_MOUSE | 4.8e-19 | 25.21 | RNA polymerase-associated protein RTF1 homolog OS=Mus musculus GN=Rtf1 PE=1 SV=1 | [more] |
RTF1_HUMAN | 8.2e-19 | 24.36 | RNA polymerase-associated protein RTF1 homolog OS=Homo sapiens GN=RTF1 PE=1 SV=4 | [more] |
RTF1_PONAB | 6.5e-16 | 24.88 | RNA polymerase-associated protein RTF1 homolog (Fragment) OS=Pongo abelii GN=RTF... | [more] |
RTF1_CAEEL | 7.9e-14 | 23.86 | RNA polymerase-associated protein RTF1 homolog OS=Caenorhabditis elegans GN=rtfo... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KXW1_CUCSA | 0.0e+00 | 92.27 | Uncharacterized protein OS=Cucumis sativus GN=Csa_4G038650 PE=4 SV=1 | [more] |
A0A067JDU6_JATCU | 5.9e-266 | 77.16 | Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21409 PE=4 SV=1 | [more] |
W9RDA9_9ROSA | 4.2e-264 | 77.49 | RNA polymerase-associated protein RTF1-like protein OS=Morus notabilis GN=L484_0... | [more] |
A0A0D2T1B1_GOSRA | 1.2e-263 | 76.55 | Uncharacterized protein OS=Gossypium raimondii GN=B456_011G025800 PE=4 SV=1 | [more] |
A0A061GFX4_THECC | 4.7e-263 | 76.59 | PAF1 complex component isoform 1 OS=Theobroma cacao GN=TCM_029914 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT1G61040.1 | 1.0e-232 | 68.83 | plus-3 domain-containing protein | [more] |