Lsi07G001330 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi07G001330
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionCyclin-dependent protein kinase, putative
Locationchr07 : 1458018 .. 1460455 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATTTGAATAGAAAAAGGCAAGAAAGAGAGAAAGAAAATGAGTTGTACTTGATCATCCACCCAAAGCCAGCTGCAATGATGACCAAATTAAAATCTGAGTGAAAGCAGATTGAAATATATAGCTCAAAGGAAGAAAATCAAAGGTCCAACAATGGGAGAATTAGAAGAAATAATGGTTGGGATTCCCAAAGTAATCAGTTTTCTGTCATCTGTTTTACAGAGAGTTTCAGAGTCAAATGACAAAAGGAGAGTAAGAGAAAGAGAAAGAGATGAAGAGAGGAAAATGATTTCAGGGTTTTATGGGTTGTCAAGGCCAAGCATTTCCATTAATAACTACTTGGAGAGGATTTTTAAGTATGCAAATTGTAGCCCAAGTTGCTTTGTTGTGGCTTATGTTTATCTTGATCGCTTTGTTCACAATCATCCTTCTTTTCCCATTGATTCTTTCAATGTTCATAGACTTCTCATTACAAGTGTTCTTCTCTCTGCCAAGTTCTTGGATGACTTGTAAGTTCCTTCCCTCTTTTATTTTCTTCTTTAATTATCCTTAATTATTATTTTAATTCTTGCATCTCTCCAATTTTTTCAATCTTTAGTTGGATTCTTCTTTTTTCTTTTTCTGTTTAAGTATTGATAGAAGATTAAAGACCCGTTTGGATTGACTTTCTAAGTGTTTATAAACATTTTTTTTAACTTATAAACATTAACTTAAACACTTAGAAAGTCAATTCGCCCTAAATCTATTGTAGTAATGTATGGTCACAAGTTTTTTTTTTTTTAAAAAAAAAAAAAAATTAGTGGTGATTAGACATCTGCGAGATTGTAGTATGTGGTCAACAATTTTGCCCCGTTCAATGAGTGATAGAGAGAATGCAAAACTACTCTAAATTTGTATCTATAGTTACTATAAGTATGCATAATTTGAATCTACAACTATTAGTTATTAAGCCACGGTTACATTGTGACAACTTCATTAAATGAGAATTTTCTAGTAGTATGAAAAATTCTACATTCATTAATTGCCACAAAAGTAAAATTTAAAATTTGTATGGGATCTAAAAAAATAAAATGAATATATTATTTGATGATGTACCAAATTATTCATCAAAGTAGTAGGTTTTTTTTAGTACAAAAATTGGAGATAGAGGAATTCAAACCACAAACCTTATGGTTATTAGTATACTAGGATGTCAGTTGAGCTAAGCTCTTGGCGGGAGTAGTAGGTACTACCTTAGTATTATAATTTTTCCTTATTCTCCTAATTTTTATTCTTTTAAAAAAATATAAGTGTTGGTTGAGCTGCATTTATCTTCGTGCAGTTCACTTTGTTATGCAATTAAAATTTGTCACATGGCAAACATTTCTTTAAAAAAAAAAACAATGAATTATTATTTATCTACTATGTAATAAAAGAAAATAACATGGAGATAGGTGCAGTTTAGGTTACACTTAATCAACAATTAGGAGATTAAATCCATATCTACCTCTTTTAATTTGTCATGTTGAAAATTTATATGTTAATTTGTAAAATTATTTATTGAGTTTATTAATTTATTCCATAAAATGTAGAAATTGATGAGTTAAATGTTTTTGGGGTTTTTTTTTTAATTATTTTTTCAGGTATTACAACAATGCCTACTATGCCAAAGTGGGTGGAATAAGCACCATGGAGATGAACATTCTTGAATTGGATTTCTTATTTGGTTTGAGATTCCAATTAAATGTGTCACCCAACACATTTCACATTTATTGTTCTTATCTCCAATCAGAAATGCTATTAACACAACCCAAACTTCAAATCCAAACCTCTCTAAAACTTGAAGAAGAAACTTCTCTTCAAAAACAATTCGCAGTTTCAATTTAAGTGCATGTTCGAGATTGATTTTAAAATTATTAAAATTATATTTATCATTTTTTTAAAAAAAATTACTCTAAAATATGCTTTTTCATATCATCAAATTAAATTAATTTTAAACGATTAAAAACATGTTTCATAGTAATTTTGAAAACATCAAAAGTGATTTTAATCATTTTATAATCACTCTCAAACGTGCTCTAGATCATTAGAAAGTTATTATGATTATAATATATAGTCATAAAAGTGAGTGTCACTTTTTTATTTTTATTTTTATTTAAGTTTGAAATCCATCAAAATAGGGGTAAATGTGGGTTTTTACTCTCAAGCTTTTTGGGCCAAGAGAAGCATGACAAGTCTCCCCAAATGGGTTTTTGATTTATCATCCTAATTTGCCTTCCTTGTAGTTGTTGGACATTTTTGCCCCTCTATGTAGAATTGTATTTTGATGATTTGTAAGTAGAAGTTACCTTTATTTTATGTATGATTTGTAAGTATAGATATTGTAACTTCTTTTGATTTAGTCTAATAGTGATAATTTAAATGTTTGTAAAGTTGAATAAATATAAAGTTTCTTTTTCTA

mRNA sequence

CATTTGAATAGAAAAAGGCAAGAAAGAGAGAAAGAAAATGAGTTGTACTTGATCATCCACCCAAAGCCAGCTGCAATGATGACCAAATTAAAATCTGAGTGAAAGCAGATTGAAATATATAGCTCAAAGGAAGAAAATCAAAGGTCCAACAATGGGAGAATTAGAAGAAATAATGGTTGGGATTCCCAAAGTAATCAGTTTTCTGTCATCTGTTTTACAGAGAGTTTCAGAGTCAAATGACAAAAGGAGAGTAAGAGAAAGAGAAAGAGATGAAGAGAGGAAAATGATTTCAGGGTTTTATGGGTTGTCAAGGCCAAGCATTTCCATTAATAACTACTTGGAGAGGATTTTTAAGTATGCAAATTGTAGCCCAAGTTGCTTTGTTGTGGCTTATGTTTATCTTGATCGCTTTGTTCACAATCATCCTTCTTTTCCCATTGATTCTTTCAATGTTCATAGACTTCTCATTACAAGTGTTCTTCTCTCTGCCAAGTTCTTGGATGACTTGTATTACAACAATGCCTACTATGCCAAAGTGGGTGGAATAAGCACCATGGAGATGAACATTCTTGAATTGGATTTCTTATTTGGTTTGAGATTCCAATTAAATGTGTCACCCAACACATTTCACATTTATTGTTCTTATCTCCAATCAGAAATGCTATTAACACAACCCAAACTTCAAATCCAAACCTCTCTAAAACTTGAAGAAGAAACTTCTCTTCAAAAACAATTCGCAGTTTCAATTTAAGTGCATGTTCGAGATTGATTTTAAAATTATTAAAATTATATTTATCATTTTTTTAAAAAAAATTACTCTAAAATATGCTTTTTCATATCATCAAATTAAATTAATTTTAAACGATTAAAAACATGTTTCATAGTAATTTTGAAAACATCAAAAGTGATTTTAATCATTTTATAATCACTCTCAAACGTGCTCTAGATCATTAGAAAGTTATTATGATTATAATATATAGTCATAAAAGTGAGTGTCACTTTTTTATTTTTATTTTTATTTAAGTTTGAAATCCATCAAAATAGGGGTAAATGTGGGTTTTTACTCTCAAGCTTTTTGGGCCAAGAGAAGCATGACAAGTCTCCCCAAATGGGTTTTTGATTTATCATCCTAATTTGCCTTCCTTGTAGTTGTTGGACATTTTTGCCCCTCTATGTAGAATTGTATTTTGATGATTTGTAAGTAGAAGTTACCTTTATTTTATGTATGATTTGTAAGTATAGATATTGTAACTTCTTTTGATTTAGTCTAATAGTGATAATTTAAATGTTTGTAAAGTTGAATAAATATAAAGTTTCTTTTTCTA

Coding sequence (CDS)

ATGGGAGAATTAGAAGAAATAATGGTTGGGATTCCCAAAGTAATCAGTTTTCTGTCATCTGTTTTACAGAGAGTTTCAGAGTCAAATGACAAAAGGAGAGTAAGAGAAAGAGAAAGAGATGAAGAGAGGAAAATGATTTCAGGGTTTTATGGGTTGTCAAGGCCAAGCATTTCCATTAATAACTACTTGGAGAGGATTTTTAAGTATGCAAATTGTAGCCCAAGTTGCTTTGTTGTGGCTTATGTTTATCTTGATCGCTTTGTTCACAATCATCCTTCTTTTCCCATTGATTCTTTCAATGTTCATAGACTTCTCATTACAAGTGTTCTTCTCTCTGCCAAGTTCTTGGATGACTTGTATTACAACAATGCCTACTATGCCAAAGTGGGTGGAATAAGCACCATGGAGATGAACATTCTTGAATTGGATTTCTTATTTGGTTTGAGATTCCAATTAAATGTGTCACCCAACACATTTCACATTTATTGTTCTTATCTCCAATCAGAAATGCTATTAACACAACCCAAACTTCAAATCCAAACCTCTCTAAAACTTGAAGAAGAAACTTCTCTTCAAAAACAATTCGCAGTTTCAATTTAA

Protein sequence

MGELEEIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHRLLITSVLLSAKFLDDLYYNNAYYAKVGGISTMEMNILELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTQPKLQIQTSLKLEEETSLQKQFAVSI
Homology
[Close]
BLAST of Lsi07G001330 vs. Swiss-Prot
Match: CCU41_ARATH (Cyclin-U4-1 OS=Arabidopsis thaliana GN=CYCU4-1 PE=1 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.5e-61
Identity = 132/201 (65.67%), Postives = 157/201 (78.11%), Query Frame = 1 

Query: 1   MGELEEIMVGIPKVISFLSSVLQRVSESND-KRRVRERERDEERKMISGFYGLSRPSISI 60
           M ELE   V + K+I+FLSS+L+RV+ESND  RRV  + +      +S F+GLSRP+I+I
Sbjct: 1   MAELENPSV-MSKLIAFLSSLLERVAESNDLTRRVATQSQ-----RVSVFHGLSRPTITI 60

Query: 61  NNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHRLLITSVLLSAKFLDDL 120
            +YLERIFKYANCSPSCFVVAYVYLDRF H  PS PI+SFNVHRLLITSV+++AKFLDDL
Sbjct: 61  QSYLERIFKYANCSPSCFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDL 120

Query: 121 YYNNAYYAKVGGISTMEMNILELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTQP--KL 180
           YYNNAYYAKVGGIST EMN LELDFLFGL F+LNV+PNTF+ Y SYLQ EM L QP   +
Sbjct: 121 YYNNAYYAKVGGISTKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTLLQPLSLV 180

Query: 181 QIQTSLKL----EEETSLQKQ 195
            + +S  L    ++E S QKQ
Sbjct: 181 VVPSSRSLITFNDDEASHQKQ 195

[Close]
BLAST of Lsi07G001330 vs. Swiss-Prot
Match: CCP41_ORYSJ (Cyclin-P4-1 OS=Oryza sativa subsp. japonica GN=CYCP4-1 PE=2 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 8.1e-52
Identity = 102/171 (59.65%), Postives = 129/171 (75.44%), Query Frame = 1 

Query: 6   EIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLER 65
           E+   +P+V++ LSS+LQRV+E ND          EE   +S F GL++P+ISI  YLER
Sbjct: 5   EVAEAVPRVVAILSSLLQRVAERNDAAAAAAAV-GEEAAAVSAFQGLTKPAISIGGYLER 64

Query: 66  IFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHRLLITSVLLSAKFLDDLYYNNAY 125
           IF++ANCSPSC+VVAY+YLDRF+   P+  +DSFNVHRLLITSVL + KF+DD+ YNNAY
Sbjct: 65  IFRFANCSPSCYVVAYIYLDRFLRRRPALAVDSFNVHRLLITSVLTAVKFVDDICYNNAY 124

Query: 126 YAKVGGISTMEMNILELDFLFGLRFQLNVSPNTFHIYCSYLQSEM-LLTQP 176
           +A+VGGIS MEMN LE+DFLFG+ F LNV+P  F  YC+ LQSEM  L QP
Sbjct: 125 FARVGGISLMEMNYLEVDFLFGIAFDLNVTPAAFASYCAVLQSEMTYLEQP 174

[Close]
BLAST of Lsi07G001330 vs. Swiss-Prot
Match: CCU42_ARATH (Cyclin-U4-2 OS=Arabidopsis thaliana GN=CYCU4-2 PE=1 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.4e-51
Identity = 103/164 (62.80%), Postives = 132/164 (80.49%), Query Frame = 1 

Query: 11  IPKVISFLSSVLQRVSESND--KRRVRERERDEERKMISGFYGLSRPSISINNYLERIFK 70
           +P VI+ +SS+LQRVSE+ND   R  RE +R      IS F  +++PSISI +Y+ERIFK
Sbjct: 20  MPNVITAMSSLLQRVSETNDDLSRPFREHKR------ISAFNAVTKPSISIRSYMERIFK 79

Query: 71  YANCSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHRLLITSVLLSAKFLDDLYYNNAYYAK 130
           YA+CS SC++VAY+YLDRF+   P  PIDS NVHRL+ITSVL+SAKF+DDL YNNA+YAK
Sbjct: 80  YADCSDSCYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAFYAK 139

Query: 131 VGGISTMEMNILELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLL 173
           VGGI+T EMN+LELDFLFG+ FQLNV+ +T++ YCS LQ EM++
Sbjct: 140 VGGITTEEMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREMVM 177

[Close]
BLAST of Lsi07G001330 vs. Swiss-Prot
Match: CCU43_ARATH (Cyclin-U4-3 OS=Arabidopsis thaliana GN=CYCU4-3 PE=1 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 7.6e-50
Identity = 108/191 (56.54%), Postives = 141/191 (73.82%), Query Frame = 1 

Query: 4   LEEIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYL 63
           L EIM   P V++ +S +LQRVSE+ND    +++         S F G+++PSISI +YL
Sbjct: 18  LAEIM---PSVLTAMSYLLQRVSETNDNLSQKQKP--------SSFTGVTKPSISIRSYL 77

Query: 64  ERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHRLLITSVLLSAKFLDDLYYNN 123
           ERIF+YANCS SC++VAY+YLDRFV   P  PI+SFNVHRL+ITSVL+SAKF+DDL YNN
Sbjct: 78  ERIFEYANCSYSCYIVAYIYLDRFVKKQPFLPINSFNVHRLIITSVLVSAKFMDDLSYNN 137

Query: 124 AYYAKVGGISTMEMNILELDFLFGLRFQLNVSPNTFHIYCSYLQSE--MLLTQPKLQIQ- 183
            YYAKVGGIS  EMN+LELDFLFG+ F+LNV+ +TF+ YC +LQ E  ML+    L ++ 
Sbjct: 138 EYYAKVGGISREEMNMLELDFLFGIGFELNVTVSTFNNYCCFLQREMAMLMKMKSLFLEP 197

Query: 184 TSLKLEEETSL 192
           +S K+  +T L
Sbjct: 198 SSFKISSKTKL 197

[Close]
BLAST of Lsi07G001330 vs. Swiss-Prot
Match: CCU11_ARATH (Cyclin-U1-1 OS=Arabidopsis thaliana GN=CYCU1-1 PE=1 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.6e-36
Identity = 76/179 (42.46%), Postives = 115/179 (64.25%), Query Frame = 1 

Query: 12  PKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYAN 71
           P+V++ +S V++++   N+      ++     K +  F+G+  PSISI  YLERI+KY  
Sbjct: 25  PRVLTIISHVMEKLVARNEWLA---KQTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTK 84

Query: 72  CSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHRLLITSVLLSAKFLDDLYYNNAYYAKVGG 131
           CSP+CFVV YVY+DR  H HP   + S NVHRLL+T V+++AK LDD++YNN +YA+VGG
Sbjct: 85  CSPACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGG 144

Query: 132 ISTMEMNILELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTQPKLQIQTSLKLEEETS 191
           +S  ++N +EL+ LF L F++ VS   F  YC +L+ EM L      ++    ++E  S
Sbjct: 145 VSNADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEMQLNDAVSSLKDIQPMQESLS 200

[Close]
BLAST of Lsi07G001330 vs. TrEMBL
Match: A0A0A0KZ83_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G025110 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 3.9e-69
Identity = 148/187 (79.14%), Postives = 160/187 (85.56%), Query Frame = 1 

Query: 1   MGELEEIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISIN 60
           MGE +E MVGIPKVI++LSSVLQRVS+SNDK      +R+      SGF G+SRPSISI 
Sbjct: 1   MGE-KEGMVGIPKVINYLSSVLQRVSDSNDKENRMITKRNN-----SGFDGISRPSISIQ 60

Query: 61  NYLERIFKYANCSPSCFVVAYVYLDRFVHNH-PS-FPIDSFNVHRLLITSVLLSAKFLDD 120
           +YLERIFKYANCSPSCFV AYVYL RF+HNH PS   IDSFNVHRLLITSVL+SAKF DD
Sbjct: 61  SYLERIFKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDD 120

Query: 121 LYYNNAYYAKVGGISTMEMNILELDFLFGLRFQLNVSPNTFHIYCSYLQSEML-LTQPKL 180
           LYYNNAYYAKVGGISTMEMN LELDFLFGLRFQLNVSPNTFHIYCSYLQSEML  TQPKL
Sbjct: 121 LYYNNAYYAKVGGISTMEMNHLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLSTTQPKL 180

Query: 181 QIQTSLK 185
           QIQT ++
Sbjct: 181 QIQTPIE 181

[Close]
BLAST of Lsi07G001330 vs. TrEMBL
Match: B9RA01_RICCO (Cyclin-dependent protein kinase, putative OS=Ricinus communis GN=RCOM_1502450 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 9.0e-66
Identity = 137/209 (65.55%), Postives = 163/209 (77.99%), Query Frame = 1 

Query: 1   MGELEEIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISIN 60
           M +LE  +V +PKV++FLSS+LQRV+ESND       +R      IS F+GL+RPSIS+ 
Sbjct: 1   MADLEATVVVMPKVVTFLSSLLQRVAESNDLSHQLHPQR------ISVFHGLTRPSISVQ 60

Query: 61  NYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHRLLITSVLLSAKFLDDLY 120
           +YLERIFKYANCSPSCFV+AYVYLDRF    PSFPI+SFNVHRLLITSVL+SAKF+DD+Y
Sbjct: 61  SYLERIFKYANCSPSCFVIAYVYLDRFAQRQPSFPINSFNVHRLLITSVLVSAKFMDDIY 120

Query: 121 YNNAYYAKVGGISTMEMNILELDFLFGLRFQLNVSPNTFHIYCSYLQSEML-------LT 180
           YNNAYYAKVGGIST EMNILE+DFLFGL FQLNV+PNTFH YCSYLQ EML       L 
Sbjct: 121 YNNAYYAKVGGISTSEMNILEVDFLFGLGFQLNVTPNTFHTYCSYLQREMLVQSSQHQLV 180

Query: 181 QPKLQIQTSLKL-----EEETSLQKQFAV 198
           +P L +  +LK+     E+E++ QKQ AV
Sbjct: 181 EPPLNMARALKIHCCFSEDESTHQKQLAV 203

[Close]
BLAST of Lsi07G001330 vs. TrEMBL
Match: V4LH68_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10001641mg PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.6e-62
Identity = 127/175 (72.57%), Postives = 146/175 (83.43%), Query Frame = 1 

Query: 1   MGELEEIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISIN 60
           M ELE+  V +PK+I+FLSS+L+RV+ESND    R R    + + +S F+GLSRP+I+I 
Sbjct: 1   MAELEKAGV-MPKLIAFLSSLLERVAESND----RTRRVTTQSQRVSVFHGLSRPTITIQ 60

Query: 61  NYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHRLLITSVLLSAKFLDDLY 120
           +YLERIFKYANCSPSCFVVAYVYLDRF H  PS PI+SFNVHRLLITSV++SAKFLDDLY
Sbjct: 61  SYLERIFKYANCSPSCFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVSAKFLDDLY 120

Query: 121 YNNAYYAKVGGISTMEMNILELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTQP 176
           YNNAYYAKVGGIST EMN+LELDFLFGL F LNV+PNTFH Y SYLQ EM L QP
Sbjct: 121 YNNAYYAKVGGISTKEMNLLELDFLFGLGFDLNVTPNTFHAYFSYLQKEMTLLQP 170

[Close]
BLAST of Lsi07G001330 vs. TrEMBL
Match: A0A067JI41_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26314 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 2.1e-62
Identity = 132/204 (64.71%), Postives = 153/204 (75.00%), Query Frame = 1 

Query: 6   EIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLER 65
           E    +PKVISFLSS+LQRV+ESND R     +R      IS F+GL+RP+ISI  YLER
Sbjct: 5   EASEAMPKVISFLSSLLQRVAESNDLRSQLYPQR------ISVFHGLTRPNISIQTYLER 64

Query: 66  IFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHRLLITSVLLSAKFLDDLYYNNAY 125
           IFKYANCSPSCFVVAYVYLDRF    PS PI+SFNVHRLLITSVL+SAKF+DD+YYNNAY
Sbjct: 65  IFKYANCSPSCFVVAYVYLDRFAQRQPSLPINSFNVHRLLITSVLVSAKFMDDIYYNNAY 124

Query: 126 YAKVGGISTMEMNILELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTQPKLQIQTSLKL 185
           YAKVGGIST EMN+LE+DFLFGL FQLNV+P TFH YCSYLQ EML+  P   ++  L +
Sbjct: 125 YAKVGGISTAEMNVLEVDFLFGLGFQLNVAPTTFHTYCSYLQREMLMQSPVQLVEPPLNM 184

Query: 186 ------------EEETSLQKQFAV 198
                       ++E+S QKQ AV
Sbjct: 185 TIRPLKIHCCFNDDESSHQKQLAV 202

[Close]
BLAST of Lsi07G001330 vs. TrEMBL
Match: A0A067HC85_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028611mg PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 2.3e-61
Identity = 131/196 (66.84%), Postives = 154/196 (78.57%), Query Frame = 1 

Query: 1   MGELEEIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISIN 60
           M ELE   V + K+I+FLSS LQRVSESND   +  R + ++   IS F+GL+RPSISI 
Sbjct: 1   MAELENPNV-MTKLITFLSSFLQRVSESND---INCRFQPQK---ISVFHGLTRPSISIQ 60

Query: 61  NYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHRLLITSVLLSAKFLDDLY 120
           +YLERIFKYANCSPSCF+VAYVYLDRFV   PS PI+SFNVHRLLITSV+++AKFLDD+Y
Sbjct: 61  SYLERIFKYANCSPSCFIVAYVYLDRFVQRQPSLPINSFNVHRLLITSVMVAAKFLDDMY 120

Query: 121 YNNAYYAKVGGISTMEMNILELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTQPKLQI- 180
           YNNAYYAKVGGIST+EMN LELDFLFGL F LNV+PN FH YC+YLQ EMLL QP L + 
Sbjct: 121 YNNAYYAKVGGISTIEMNFLELDFLFGLSFHLNVTPNAFHTYCTYLQREMLLLQPPLNVA 180

Query: 181 QTSLKLEEETSLQKQF 196
           ++SL +     L   F
Sbjct: 181 ESSLSIARSAKLHSCF 189

[Close]
BLAST of Lsi07G001330 vs. TAIR10
Match: AT2G44740.1 (AT2G44740.1 cyclin p4;1)

HSP 1 Score: 236.5 bits (602), Expect = 1.4e-62
Identity = 132/201 (65.67%), Postives = 157/201 (78.11%), Query Frame = 1 

Query: 1   MGELEEIMVGIPKVISFLSSVLQRVSESND-KRRVRERERDEERKMISGFYGLSRPSISI 60
           M ELE   V + K+I+FLSS+L+RV+ESND  RRV  + +      +S F+GLSRP+I+I
Sbjct: 1   MAELENPSV-MSKLIAFLSSLLERVAESNDLTRRVATQSQ-----RVSVFHGLSRPTITI 60

Query: 61  NNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHRLLITSVLLSAKFLDDL 120
            +YLERIFKYANCSPSCFVVAYVYLDRF H  PS PI+SFNVHRLLITSV+++AKFLDDL
Sbjct: 61  QSYLERIFKYANCSPSCFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDL 120

Query: 121 YYNNAYYAKVGGISTMEMNILELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTQP--KL 180
           YYNNAYYAKVGGIST EMN LELDFLFGL F+LNV+PNTF+ Y SYLQ EM L QP   +
Sbjct: 121 YYNNAYYAKVGGISTKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTLLQPLSLV 180

Query: 181 QIQTSLKL----EEETSLQKQ 195
            + +S  L    ++E S QKQ
Sbjct: 181 VVPSSRSLITFNDDEASHQKQ 195

[Close]
BLAST of Lsi07G001330 vs. TAIR10
Match: AT5G07450.1 (AT5G07450.1 cyclin p4;3)

HSP 1 Score: 204.1 bits (518), Expect = 7.8e-53
Identity = 103/164 (62.80%), Postives = 132/164 (80.49%), Query Frame = 1 

Query: 11  IPKVISFLSSVLQRVSESND--KRRVRERERDEERKMISGFYGLSRPSISINNYLERIFK 70
           +P VI+ +SS+LQRVSE+ND   R  RE +R      IS F  +++PSISI +Y+ERIFK
Sbjct: 20  MPNVITAMSSLLQRVSETNDDLSRPFREHKR------ISAFNAVTKPSISIRSYMERIFK 79

Query: 71  YANCSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHRLLITSVLLSAKFLDDLYYNNAYYAK 130
           YA+CS SC++VAY+YLDRF+   P  PIDS NVHRL+ITSVL+SAKF+DDL YNNA+YAK
Sbjct: 80  YADCSDSCYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAFYAK 139

Query: 131 VGGISTMEMNILELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLL 173
           VGGI+T EMN+LELDFLFG+ FQLNV+ +T++ YCS LQ EM++
Sbjct: 140 VGGITTEEMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREMVM 177

[Close]
BLAST of Lsi07G001330 vs. TAIR10
Match: AT5G61650.1 (AT5G61650.1 CYCLIN P4;2)

HSP 1 Score: 198.4 bits (503), Expect = 4.3e-51
Identity = 108/191 (56.54%), Postives = 141/191 (73.82%), Query Frame = 1 

Query: 4   LEEIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYL 63
           L EIM   P V++ +S +LQRVSE+ND    +++         S F G+++PSISI +YL
Sbjct: 18  LAEIM---PSVLTAMSYLLQRVSETNDNLSQKQKP--------SSFTGVTKPSISIRSYL 77

Query: 64  ERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHRLLITSVLLSAKFLDDLYYNN 123
           ERIF+YANCS SC++VAY+YLDRFV   P  PI+SFNVHRL+ITSVL+SAKF+DDL YNN
Sbjct: 78  ERIFEYANCSYSCYIVAYIYLDRFVKKQPFLPINSFNVHRLIITSVLVSAKFMDDLSYNN 137

Query: 124 AYYAKVGGISTMEMNILELDFLFGLRFQLNVSPNTFHIYCSYLQSE--MLLTQPKLQIQ- 183
            YYAKVGGIS  EMN+LELDFLFG+ F+LNV+ +TF+ YC +LQ E  ML+    L ++ 
Sbjct: 138 EYYAKVGGISREEMNMLELDFLFGIGFELNVTVSTFNNYCCFLQREMAMLMKMKSLFLEP 197

Query: 184 TSLKLEEETSL 192
           +S K+  +T L
Sbjct: 198 SSFKISSKTKL 197

[Close]
BLAST of Lsi07G001330 vs. TAIR10
Match: AT3G21870.1 (AT3G21870.1 cyclin p2;1)

HSP 1 Score: 154.1 bits (388), Expect = 9.2e-38
Identity = 76/179 (42.46%), Postives = 115/179 (64.25%), Query Frame = 1 

Query: 12  PKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYAN 71
           P+V++ +S V++++   N+      ++     K +  F+G+  PSISI  YLERI+KY  
Sbjct: 25  PRVLTIISHVMEKLVARNEWLA---KQTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTK 84

Query: 72  CSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHRLLITSVLLSAKFLDDLYYNNAYYAKVGG 131
           CSP+CFVV YVY+DR  H HP   + S NVHRLL+T V+++AK LDD++YNN +YA+VGG
Sbjct: 85  CSPACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGG 144

Query: 132 ISTMEMNILELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTQPKLQIQTSLKLEEETS 191
           +S  ++N +EL+ LF L F++ VS   F  YC +L+ EM L      ++    ++E  S
Sbjct: 145 VSNADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEMQLNDAVSSLKDIQPMQESLS 200

[Close]
BLAST of Lsi07G001330 vs. TAIR10
Match: AT3G63120.1 (AT3G63120.1 cyclin p1;1)

HSP 1 Score: 147.9 bits (372), Expect = 6.6e-36
Identity = 76/158 (48.10%), Postives = 107/158 (67.72%), Query Frame = 1 

Query: 12  PKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYAN 71
           P V+S LSS L+R    N   ++     D     ++ F G S P ISI +YL+RIFKY+ 
Sbjct: 32  PTVLSRLSSSLERSLLLNHDDKILLGSPDS----VTVFDGRSPPEISIAHYLDRIFKYSC 91

Query: 72  CSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHRLLITSVLLSAKFLDDLYYNNAYYAKVGG 131
           CSPSCFV+A++Y+D F+H   +  +   NVHRL+IT+V+L+AK  DD Y+NNAYYA+VGG
Sbjct: 92  CSPSCFVIAHIYIDHFLHKTRAL-LKPLNVHRLIITTVMLAAKVFDDRYFNNAYYARVGG 151

Query: 132 ISTMEMNILELDFLFGLRFQLNVSPNTFHIYCSYLQSE 170
           ++T E+N LE++ LF L F+L V P TFH +C  L+ +
Sbjct: 152 VTTRELNRLEMELLFTLDFKLQVDPQTFHTHCCQLEKQ 184

[Close]
BLAST of Lsi07G001330 vs. NCBI nr
Match: gi|659107765|ref|XP_008453846.1| (PREDICTED: cyclin-U4-1-like [Cucumis melo])

HSP 1 Score: 284.6 bits (727), Expect = 1.3e-73
Identity = 159/206 (77.18%), Postives = 173/206 (83.98%), Query Frame = 1 

Query: 1   MGELEEIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISIN 60
           +GE EE MVGIPKVI++LSSVLQRVSESND+   R      +R   SGF G+SRPSISI 
Sbjct: 4   VGEKEE-MVGIPKVINYLSSVLQRVSESNDQED-RMMNNGTKRNNYSGFDGISRPSISIQ 63

Query: 61  NYLERIFKYANCSPSCFVVAYVYLDRFVHNH-PS-FPIDSFNVHRLLITSVLLSAKFLDD 120
           +YLERIFKYANCSPSCFVVAYVYL RF+HNH PS F IDSFNVHRLLITSVL+SAKF DD
Sbjct: 64  SYLERIFKYANCSPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFDD 123

Query: 121 LYYNNAYYAKVGGISTMEMNILELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLL-TQPKL 180
           LYYNNAYYAKVGGISTMEMN+LELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLL TQPKL
Sbjct: 124 LYYNNAYYAKVGGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPKL 183

Query: 181 QIQTSLKL------EEETSLQKQFAV 198
           QIQT +K       +++ SLQKQ  V
Sbjct: 184 QIQTPIKQLHSFTEDQDASLQKQLTV 207

[Close]
BLAST of Lsi07G001330 vs. NCBI nr
Match: gi|449458397|ref|XP_004146934.1| (PREDICTED: cyclin-U4-1-like [Cucumis sativus])

HSP 1 Score: 269.2 bits (687), Expect = 5.6e-69
Identity = 148/187 (79.14%), Postives = 160/187 (85.56%), Query Frame = 1 

Query: 1   MGELEEIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISIN 60
           MGE +E MVGIPKVI++LSSVLQRVS+SNDK      +R+      SGF G+SRPSISI 
Sbjct: 1   MGE-KEGMVGIPKVINYLSSVLQRVSDSNDKENRMITKRNN-----SGFDGISRPSISIQ 60

Query: 61  NYLERIFKYANCSPSCFVVAYVYLDRFVHNH-PS-FPIDSFNVHRLLITSVLLSAKFLDD 120
           +YLERIFKYANCSPSCFV AYVYL RF+HNH PS   IDSFNVHRLLITSVL+SAKF DD
Sbjct: 61  SYLERIFKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDD 120

Query: 121 LYYNNAYYAKVGGISTMEMNILELDFLFGLRFQLNVSPNTFHIYCSYLQSEML-LTQPKL 180
           LYYNNAYYAKVGGISTMEMN LELDFLFGLRFQLNVSPNTFHIYCSYLQSEML  TQPKL
Sbjct: 121 LYYNNAYYAKVGGISTMEMNHLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLSTTQPKL 180

Query: 181 QIQTSLK 185
           QIQT ++
Sbjct: 181 QIQTPIE 181

[Close]
BLAST of Lsi07G001330 vs. NCBI nr
Match: gi|255539923|ref|XP_002511026.1| (PREDICTED: cyclin-U4-1 [Ricinus communis])

HSP 1 Score: 258.1 bits (658), Expect = 1.3e-65
Identity = 137/209 (65.55%), Postives = 163/209 (77.99%), Query Frame = 1 

Query: 1   MGELEEIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISIN 60
           M +LE  +V +PKV++FLSS+LQRV+ESND       +R      IS F+GL+RPSIS+ 
Sbjct: 1   MADLEATVVVMPKVVTFLSSLLQRVAESNDLSHQLHPQR------ISVFHGLTRPSISVQ 60

Query: 61  NYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHRLLITSVLLSAKFLDDLY 120
           +YLERIFKYANCSPSCFV+AYVYLDRF    PSFPI+SFNVHRLLITSVL+SAKF+DD+Y
Sbjct: 61  SYLERIFKYANCSPSCFVIAYVYLDRFAQRQPSFPINSFNVHRLLITSVLVSAKFMDDIY 120

Query: 121 YNNAYYAKVGGISTMEMNILELDFLFGLRFQLNVSPNTFHIYCSYLQSEML-------LT 180
           YNNAYYAKVGGIST EMNILE+DFLFGL FQLNV+PNTFH YCSYLQ EML       L 
Sbjct: 121 YNNAYYAKVGGISTSEMNILEVDFLFGLGFQLNVTPNTFHTYCSYLQREMLVQSSQHQLV 180

Query: 181 QPKLQIQTSLKL-----EEETSLQKQFAV 198
           +P L +  +LK+     E+E++ QKQ AV
Sbjct: 181 EPPLNMARALKIHCCFSEDESTHQKQLAV 203

[Close]
BLAST of Lsi07G001330 vs. NCBI nr
Match: gi|567165837|ref|XP_006397655.1| (hypothetical protein EUTSA_v10001641mg [Eutrema salsugineum])

HSP 1 Score: 247.3 bits (630), Expect = 2.3e-62
Identity = 127/175 (72.57%), Postives = 146/175 (83.43%), Query Frame = 1 

Query: 1   MGELEEIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISIN 60
           M ELE+  V +PK+I+FLSS+L+RV+ESND    R R    + + +S F+GLSRP+I+I 
Sbjct: 1   MAELEKAGV-MPKLIAFLSSLLERVAESND----RTRRVTTQSQRVSVFHGLSRPTITIQ 60

Query: 61  NYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHRLLITSVLLSAKFLDDLY 120
           +YLERIFKYANCSPSCFVVAYVYLDRF H  PS PI+SFNVHRLLITSV++SAKFLDDLY
Sbjct: 61  SYLERIFKYANCSPSCFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVSAKFLDDLY 120

Query: 121 YNNAYYAKVGGISTMEMNILELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTQP 176
           YNNAYYAKVGGIST EMN+LELDFLFGL F LNV+PNTFH Y SYLQ EM L QP
Sbjct: 121 YNNAYYAKVGGISTKEMNLLELDFLFGLGFDLNVTPNTFHAYFSYLQKEMTLLQP 170

[Close]
BLAST of Lsi07G001330 vs. NCBI nr
Match: gi|802770022|ref|XP_012090519.1| (PREDICTED: cyclin-U4-1 [Jatropha curcas])

HSP 1 Score: 246.9 bits (629), Expect = 3.0e-62
Identity = 132/204 (64.71%), Postives = 153/204 (75.00%), Query Frame = 1 

Query: 6   EIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLER 65
           E    +PKVISFLSS+LQRV+ESND R     +R      IS F+GL+RP+ISI  YLER
Sbjct: 5   EASEAMPKVISFLSSLLQRVAESNDLRSQLYPQR------ISVFHGLTRPNISIQTYLER 64

Query: 66  IFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHRLLITSVLLSAKFLDDLYYNNAY 125
           IFKYANCSPSCFVVAYVYLDRF    PS PI+SFNVHRLLITSVL+SAKF+DD+YYNNAY
Sbjct: 65  IFKYANCSPSCFVVAYVYLDRFAQRQPSLPINSFNVHRLLITSVLVSAKFMDDIYYNNAY 124

Query: 126 YAKVGGISTMEMNILELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTQPKLQIQTSLKL 185
           YAKVGGIST EMN+LE+DFLFGL FQLNV+P TFH YCSYLQ EML+  P   ++  L +
Sbjct: 125 YAKVGGISTAEMNVLEVDFLFGLGFQLNVAPTTFHTYCSYLQREMLMQSPVQLVEPPLNM 184

Query: 186 ------------EEETSLQKQFAV 198
                       ++E+S QKQ AV
Sbjct: 185 TIRPLKIHCCFNDDESSHQKQLAV 202

The following BLAST results are available for this feature:
BLAST of Lsi07G001330 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CCU41_ARATH2.5e-6165.67Cyclin-U4-1 OS=Arabidopsis thaliana GN=CYCU4-1 PE=1 SV=1[more]
CCP41_ORYSJ8.1e-5259.65Cyclin-P4-1 OS=Oryza sativa subsp. japonica GN=CYCP4-1 PE=2 SV=1[more]
CCU42_ARATH1.4e-5162.80Cyclin-U4-2 OS=Arabidopsis thaliana GN=CYCU4-2 PE=1 SV=1[more]
CCU43_ARATH7.6e-5056.54Cyclin-U4-3 OS=Arabidopsis thaliana GN=CYCU4-3 PE=1 SV=1[more]
CCU11_ARATH1.6e-3642.46Cyclin-U1-1 OS=Arabidopsis thaliana GN=CYCU1-1 PE=1 SV=1[more]
BLAST of Lsi07G001330 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZ83_CUCSA3.9e-6979.14Uncharacterized protein OS=Cucumis sativus GN=Csa_4G025110 PE=4 SV=1[more]
B9RA01_RICCO9.0e-6665.55Cyclin-dependent protein kinase, putative OS=Ricinus communis GN=RCOM_1502450 PE... [more]
V4LH68_EUTSA1.6e-6272.57Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10001641mg PE=4 SV=1[more]
A0A067JI41_JATCU2.1e-6264.71Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26314 PE=4 SV=1[more]
A0A067HC85_CITSI2.3e-6166.84Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028611mg PE=4 SV=1[more]
BLAST of Lsi07G001330 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G44740.11.4e-6265.67 cyclin p4;1[more]
AT5G07450.17.8e-5362.80 cyclin p4;3[more]
AT5G61650.14.3e-5156.54 CYCLIN P4;2[more]
AT3G21870.19.2e-3842.46 cyclin p2;1[more]
AT3G63120.16.6e-3648.10 cyclin p1;1[more]
BLAST of Lsi07G001330 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659107765|ref|XP_008453846.1|1.3e-7377.18PREDICTED: cyclin-U4-1-like [Cucumis melo][more]
gi|449458397|ref|XP_004146934.1|5.6e-6979.14PREDICTED: cyclin-U4-1-like [Cucumis sativus][more]
gi|255539923|ref|XP_002511026.1|1.3e-6565.55PREDICTED: cyclin-U4-1 [Ricinus communis][more]
gi|567165837|ref|XP_006397655.1|2.3e-6272.57hypothetical protein EUTSA_v10001641mg [Eutrema salsugineum][more]
gi|802770022|ref|XP_012090519.1|3.0e-6264.71PREDICTED: cyclin-U4-1 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0019901protein kinase binding
Vocabulary: Biological Process
TermDefinition
GO:0000079regulation of cyclin-dependent protein serine/threonine kinase activity
Vocabulary: INTERPRO
TermDefinition
IPR013922Cyclin_PHO80-like
IPR013763Cyclin-like
IPR012389Cyclin_P/U
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity
biological_process GO:0010440 stomatal lineage progression
cellular_component GO:0005575 cellular_component
molecular_function GO:0019901 protein kinase binding
molecular_function GO:0016301 kinase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi07G001330.1Lsi07G001330.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012389Cyclin P/UPIRPIRSF027110PREGcoord: 2..198
score: 5.3
IPR013763Cyclin-likeGENE3DG3DSA:1.10.472.10coord: 68..152
score: 3.
IPR013763Cyclin-likeunknownSSF47954Cyclin-likecoord: 60..153
score: 3.86
IPR013922Cyclin PHO80-likePFAMPF08613Cyclincoord: 40..152
score: 2.7
NoneNo IPR availablePANTHERPTHR15615UNCHARACTERIZEDcoord: 11..175
score: 1.9E
NoneNo IPR availablePANTHERPTHR15615:SF28CYCLIN-U4-1coord: 11..175
score: 1.9E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi07G001330Csa4G025110Cucumber (Chinese Long) v2culsiB303
Lsi07G001330CSPI04G04260Wild cucumber (PI 183967)cpilsiB303
Lsi07G001330Cucsa.093970Cucumber (Gy14) v1cgylsiB115
Lsi07G001330CmaCh04G003710Cucurbita maxima (Rimu)cmalsiB696
Lsi07G001330CmoCh04G003910Cucurbita moschata (Rifu)cmolsiB690
Lsi07G001330MELO3C017631Melon (DHL92) v3.5.1lsimeB454
Lsi07G001330ClCG07G017150Watermelon (Charleston Gray)lsiwcgB407
Lsi07G001330MELO3C017631.2Melon (DHL92) v3.6.1lsimedB471
Lsi07G001330Cla97C07G144170Watermelon (97103) v2lsiwmbB406
Lsi07G001330Bhi01G001991Wax gourdlsiwgoB555
Lsi07G001330Cp4.1LG01g03450Cucurbita pepo (Zucchini)cpelsiB374
Lsi07G001330CsGy4G004180Cucumber (Gy14) v2cgyblsiB277
Lsi07G001330Carg08045Silver-seed gourdcarlsiB347
Lsi07G001330CsaV3_4G004350Cucumber (Chinese Long) v3cuclsiB322
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi07G001330Bottle gourd (USVL1VR-Ls)lsilsiB018
Lsi07G001330Cucurbita maxima (Rimu)cmalsiB323
Lsi07G001330Cucurbita maxima (Rimu)cmalsiB590
Lsi07G001330Cucurbita moschata (Rifu)cmolsiB312
Lsi07G001330Cucurbita moschata (Rifu)cmolsiB573
Lsi07G001330Cucurbita pepo (Zucchini)cpelsiB182
Lsi07G001330Wild cucumber (PI 183967)cpilsiB389
Lsi07G001330Cucumber (Chinese Long) v2culsiB385
Lsi07G001330Melon (DHL92) v3.5.1lsimeB428
Lsi07G001330Watermelon (Charleston Gray)lsiwcgB393
Lsi07G001330Watermelon (97103) v1lsiwmB441
Lsi07G001330Silver-seed gourdcarlsiB653
Lsi07G001330Silver-seed gourdcarlsiB792
Lsi07G001330Cucumber (Chinese Long) v3cuclsiB408
Lsi07G001330Watermelon (97103) v2lsiwmbB390