CsGy4G004180 (gene) Cucumber (Gy14) v2

Overview
NameCsGy4G004180
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionCyclin-U4-1
LocationChr4 : 2736709 .. 2737545 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CATTAAAGCAAAGAAAAGAAAGAGAGAGAGAGAGAGAGTTAGTAATTGATCCACACCCACAACCAAAATAAAAATGAGAGTGAAAGCACTTCTGAAATAGGTGAAGATCGATAATATTGAATGGGAGAAAAAGAAGGAATGGTTGGGATTCCCAAAGTCATAAACTATCTATCCTCTGTTCTACAGAGAGTTTCAGATTCCAATGACAAAGAAAACAGGATGATTACCAAAAGGAATAATTCAGGTTTTGATGGAATATCAAGACCAAGCATTTCCATACAAAGTTACTTGGAGAGGATCTTCAAGTATGCAAACTGTAGTCCAAGTTGCTTTGTTGCTGCTTATGTTTATCTTCATCGCTTTCTTCACAATCATCATCCTTCCAATCTTCATATTGATTCCTTCAACGTTCATAGACTTCTCATTACAAGTGTTCTTGTTTCTGCCAAGTTCTTCGATGATCTGTAAGTTCTTCTTCTTCTTCTTCTTTAATTTCAATATTTCTGCCAACTTTCCTCATTATCTTCTTCTTCTTCCTTCTTTAAACCTATCATGTTTGAATGTTTATTGATTCATTCCATAAAATCCTTGAAATAGATGAATTAATTGTTTCGGGATATATATGTAATTTTCTGTTCAGGTATTACAACAATGCTTACTATGCAAAAGTTGGTGGAATAAGCACCATGGAAATGAACCATCTTGAATTGGATTTCTTATTTGGTTTGAGATTCCAATTAAATGTATCACCAAACACATTTCACATTTACTGCTCTTATCTCCAATCAGAAATGCTATCAACAACACAACCCAAACTCCAAATCCAAACACCTATAG

mRNA sequence

CATTAAAGCAAAGAAAAGAAAGAGAGAGAGAGAGAGAGTTAGTAATTGATCCACACCCACAACCAAAATAAAAATGAGAGTGAAAGCACTTCTGAAATAGGTGAAGATCGATAATATTGAATGGGAGAAAAAGAAGGAATGGTTGGGATTCCCAAAGTCATAAACTATCTATCCTCTGTTCTACAGAGAGTTTCAGATTCCAATGACAAAGAAAACAGGATGATTACCAAAAGGAATAATTCAGGTTTTGATGGAATATCAAGACCAAGCATTTCCATACAAAGTTACTTGGAGAGGATCTTCAAGTATGCAAACTGTAGTCCAAGTTGCTTTGTTGCTGCTTATGTTTATCTTCATCGCTTTCTTCACAATCATCATCCTTCCAATCTTCATATTGATTCCTTCAACGTTCATAGACTTCTCATTACAAGTGTTCTTGTTTCTGCCAAGTTCTTCGATGATCTGTATTACAACAATGCTTACTATGCAAAAGTTGGTGGAATAAGCACCATGGAAATGAACCATCTTGAATTGGATTTCTTATTTGGTTTGAGATTCCAATTAAATAAATGCTATCAACAACACAACCCAAACTCCAAATCCAAACACCTATAG

Coding sequence (CDS)

ATGGGAGAAAAAGAAGGAATGGTTGGGATTCCCAAAGTCATAAACTATCTATCCTCTGTTCTACAGAGAGTTTCAGATTCCAATGACAAAGAAAACAGGATGATTACCAAAAGGAATAATTCAGGTTTTGATGGAATATCAAGACCAAGCATTTCCATACAAAGTTACTTGGAGAGGATCTTCAAGTATGCAAACTGTAGTCCAAGTTGCTTTGTTGCTGCTTATGTTTATCTTCATCGCTTTCTTCACAATCATCATCCTTCCAATCTTCATATTGATTCCTTCAACGTTCATAGACTTCTCATTACAAGTGTTCTTGTTTCTGCCAAGTTCTTCGATGATCTGTATTACAACAATGCTTACTATGCAAAAGTTGGTGGAATAAGCACCATGGAAATGAACCATCTTGAATTGGATTTCTTATTTGGTTTGAGATTCCAATTAAATAAATGCTATCAACAACACAACCCAAACTCCAAATCCAAACACCTATAG

Protein sequence

MGEKEGMVGIPKVINYLSSVLQRVSDSNDKENRMITKRNNSGFDGISRPSISIQSYLERIFKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYYAKVGGISTMEMNHLELDFLFGLRFQLNKCYQQHNPNSKSKHL
Homology
[Close]
BLAST of CsGy4G004180 vs. NCBI nr
Match: XP_004146934.1 (PREDICTED: cyclin-U4-1-like [Cucumis sativus] >KGN53181.1 hypothetical protein Csa_4G025110 [Cucumis sativus])

HSP 1 Score: 302.4 bits (773), Expect = 9.6e-79
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0 

Query: 1   MGEKEGMVGIPKVINYLSSVLQRVSDSNDKENRMITKRNNSGFDGISRPSISIQSYLERI 60
           MGEKEGMVGIPKVINYLSSVLQRVSDSNDKENRMITKRNNSGFDGISRPSISIQSYLERI
Sbjct: 1   MGEKEGMVGIPKVINYLSSVLQRVSDSNDKENRMITKRNNSGFDGISRPSISIQSYLERI 60

Query: 61  FKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNA 120
           FKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNA
Sbjct: 61  FKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNA 120

Query: 121 YYAKVGGISTMEMNHLELDFLFGLRFQLN 150
           YYAKVGGISTMEMNHLELDFLFGLRFQLN
Sbjct: 121 YYAKVGGISTMEMNHLELDFLFGLRFQLN 149

[Close]
BLAST of CsGy4G004180 vs. NCBI nr
Match: XP_022992955.1 (cyclin-U4-1-like [Cucurbita maxima])

HSP 1 Score: 199.1 bits (505), Expect = 1.1e-47
Identity = 103/142 (72.54%), Postives = 118/142 (83.10%), Query Frame = 0 

Query: 8   VGIPKVINYLSSVLQRVSDSNDKENRMITKRNNSGFDGISRPSISIQSYLERIFKYANCS 67
           V IPKVI +LSS+LQRVS+SND+ + + +    S F G+++P+ISIQ+YLERIFKYANCS
Sbjct: 12  VPIPKVITFLSSLLQRVSESNDQSHELHSAAKVSAFHGLTKPTISIQTYLERIFKYANCS 71

Query: 68  PSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYYAKVGG 127
           PSCFV AYVYL R +  H   +L IDSFNVHRLLITSVLVSAKF DDL YNNAYYAKVGG
Sbjct: 72  PSCFVVAYVYLDRLVQRH--PSLPIDSFNVHRLLITSVLVSAKFLDDLCYNNAYYAKVGG 131

Query: 128 ISTMEMNHLELDFLFGLRFQLN 150
           ISTMEMN LE+DFLFGL FQLN
Sbjct: 132 ISTMEMNLLEIDFLFGLGFQLN 151

[Close]
BLAST of CsGy4G004180 vs. NCBI nr
Match: XP_022941693.1 (cyclin-U4-1-like [Cucurbita moschata])

HSP 1 Score: 198.0 bits (502), Expect = 2.5e-47
Identity = 105/142 (73.94%), Postives = 119/142 (83.80%), Query Frame = 0 

Query: 8   VGIPKVINYLSSVLQRVSDSNDKENRMITKRNNSGFDGISRPSISIQSYLERIFKYANCS 67
           V IPKVI +LSS+LQRVS+SND+ + + +    S F G+++P+ISIQ+YLERIFKYANCS
Sbjct: 12  VPIPKVITFLSSLLQRVSESNDQSHELHSAAKVSAFHGLTKPTISIQTYLERIFKYANCS 71

Query: 68  PSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYYAKVGG 127
           PSCFV AYVYL R L   HPS L IDSFNVHRLLITSVLVSAKF DDL YNNAYYAKVGG
Sbjct: 72  PSCFVVAYVYLDR-LAQRHPS-LPIDSFNVHRLLITSVLVSAKFLDDLCYNNAYYAKVGG 131

Query: 128 ISTMEMNHLELDFLFGLRFQLN 150
           IST+EMN LE+DFLFGL FQLN
Sbjct: 132 ISTVEMNLLEIDFLFGLGFQLN 151

[Close]
BLAST of CsGy4G004180 vs. NCBI nr
Match: CDY48257.1 (BnaC04g05160D [Brassica napus])

HSP 1 Score: 197.2 bits (500), Expect = 4.3e-47
Identity = 105/150 (70.00%), Postives = 120/150 (80.00%), Query Frame = 0 

Query: 1   MGEKEGMVGIPKVINYLSSVLQRVSDSNDKENRMITKRNN-SGFDGISRPSISIQSYLER 60
           M E E    +PK+I +LSS+L+RVS+SND   R+ T+  + S FDG+SRPSI++QSYLER
Sbjct: 1   MAELENPGVMPKLIAFLSSLLERVSESNDLTRRVATQSQSVSVFDGLSRPSITVQSYLER 60

Query: 61  IFKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNN 120
           IFKYANCSPSCFV AYVYL RF   H   +L I+SFNVHRLLITSV+VSAKF DD YYNN
Sbjct: 61  IFKYANCSPSCFVVAYVYLDRF--THRQPSLPINSFNVHRLLITSVMVSAKFLDDRYYNN 120

Query: 121 AYYAKVGGISTMEMNHLELDFLFGLRFQLN 150
           AYYAKVGGIST EMN LELDFLFGL F LN
Sbjct: 121 AYYAKVGGISTKEMNLLELDFLFGLGFDLN 148

[Close]
BLAST of CsGy4G004180 vs. NCBI nr
Match: XP_021616472.1 (cyclin-U4-1-like [Manihot esculenta] >OAY48086.1 hypothetical protein MANES_06G130300 [Manihot esculenta])

HSP 1 Score: 196.1 bits (497), Expect = 9.6e-47
Identity = 103/149 (69.13%), Postives = 121/149 (81.21%), Query Frame = 0 

Query: 1   MGEKEGMVGIPKVINYLSSVLQRVSDSNDKENRMITKRNNSGFDGISRPSISIQSYLERI 60
           M + E  V +PK+I +LSS+LQRV++SND  +++  +R  S F G++RP+ISIQSYLERI
Sbjct: 1   MADLEATVVMPKIITFLSSLLQRVAESNDHTHQLHPQR-ISVFHGLTRPNISIQSYLERI 60

Query: 61  FKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNA 120
           FKYANCSPSCFV AYVYL RF H     +  I+SFNVHRLLITSVLVSAKF DD+YYNNA
Sbjct: 61  FKYANCSPSCFVVAYVYLDRFAHKQ--PSFPINSFNVHRLLITSVLVSAKFLDDIYYNNA 120

Query: 121 YYAKVGGISTMEMNHLELDFLFGLRFQLN 150
           YYAKVGGIST EMN LE+DFLFGL FQLN
Sbjct: 121 YYAKVGGISTAEMNLLEVDFLFGLGFQLN 146

[Close]
BLAST of CsGy4G004180 vs. TAIR10
Match: AT2G44740.1 (cyclin p4;1)

HSP 1 Score: 192.2 bits (487), Expect = 2.5e-49
Identity = 102/150 (68.00%), Postives = 119/150 (79.33%), Query Frame = 0 

Query: 1   MGEKEGMVGIPKVINYLSSVLQRVSDSNDKENRMITKRNN-SGFDGISRPSISIQSYLER 60
           M E E    + K+I +LSS+L+RV++SND   R+ T+    S F G+SRP+I+IQSYLER
Sbjct: 1   MAELENPSVMSKLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLER 60

Query: 61  IFKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNN 120
           IFKYANCSPSCFV AYVYL RF   H   +L I+SFNVHRLLITSV+V+AKF DDLYYNN
Sbjct: 61  IFKYANCSPSCFVVAYVYLDRF--THRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNN 120

Query: 121 AYYAKVGGISTMEMNHLELDFLFGLRFQLN 150
           AYYAKVGGIST EMN LELDFLFGL F+LN
Sbjct: 121 AYYAKVGGISTKEMNFLELDFLFGLGFELN 148

[Close]
BLAST of CsGy4G004180 vs. TAIR10
Match: AT5G07450.1 (cyclin p4;3)

HSP 1 Score: 169.1 bits (427), Expect = 2.3e-42
Identity = 89/148 (60.14%), Postives = 112/148 (75.68%), Query Frame = 0 

Query: 10  IPKVINYLSSVLQRVSDSNDKENRMITKRNN-SGFDGISRPSISIQSYLERIFKYANCSP 69
           +P VI  +SS+LQRVS++ND  +R   +    S F+ +++PSISI+SY+ERIFKYA+CS 
Sbjct: 20  MPNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTKPSISIRSYMERIFKYADCSD 79

Query: 70  SCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYYAKVGGI 129
           SC++ AY+YL RF+       L IDS NVHRL+ITSVLVSAKF DDL YNNA+YAKVGGI
Sbjct: 80  SCYIVAYIYLDRFIQKQ--PLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAFYAKVGGI 139

Query: 130 STMEMNHLELDFLFGLRFQLNKCYQQHN 157
           +T EMN LELDFLFG+ FQLN     +N
Sbjct: 140 TTEEMNLLELDFLFGIGFQLNVTISTYN 165

[Close]
BLAST of CsGy4G004180 vs. TAIR10
Match: AT5G61650.1 (CYCLIN P4;2)

HSP 1 Score: 166.4 bits (420), Expect = 1.5e-41
Identity = 87/140 (62.14%), Postives = 108/140 (77.14%), Query Frame = 0 

Query: 10  IPKVINYLSSVLQRVSDSNDKENRMITKRNNSGFDGISRPSISIQSYLERIFKYANCSPS 69
           +P V+  +S +LQRVS++ND    +  K+  S F G+++PSISI+SYLERIF+YANCS S
Sbjct: 22  MPSVLTAMSYLLQRVSETND---NLSQKQKPSSFTGVTKPSISIRSYLERIFEYANCSYS 81

Query: 70  CFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYYAKVGGIS 129
           C++ AY+YL RF+       L I+SFNVHRL+ITSVLVSAKF DDL YNN YYAKVGGIS
Sbjct: 82  CYIVAYIYLDRFVKKQ--PFLPINSFNVHRLIITSVLVSAKFMDDLSYNNEYYAKVGGIS 141

Query: 130 TMEMNHLELDFLFGLRFQLN 150
             EMN LELDFLFG+ F+LN
Sbjct: 142 REEMNMLELDFLFGIGFELN 156

[Close]
BLAST of CsGy4G004180 vs. TAIR10
Match: AT3G63120.1 (cyclin p1;1)

HSP 1 Score: 130.2 bits (326), Expect = 1.2e-30
Identity = 68/139 (48.92%), Postives = 97/139 (69.78%), Query Frame = 0 

Query: 11  PKVINYLSSVLQRVSDSNDKENRMITKRNN-SGFDGISRPSISIQSYLERIFKYANCSPS 70
           P V++ LSS L+R    N  +  ++   ++ + FDG S P ISI  YL+RIFKY+ CSPS
Sbjct: 32  PTVLSRLSSSLERSLLLNHDDKILLGSPDSVTVFDGRSPPEISIAHYLDRIFKYSCCSPS 91

Query: 71  CFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYYAKVGGIS 130
           CFV A++Y+  FLH    +   +   NVHRL+IT+V+++AK FDD Y+NNAYYA+VGG++
Sbjct: 92  CFVIAHIYIDHFLHK---TRALLKPLNVHRLIITTVMLAAKVFDDRYFNNAYYARVGGVT 151

Query: 131 TMEMNHLELDFLFGLRFQL 149
           T E+N LE++ LF L F+L
Sbjct: 152 TRELNRLEMELLFTLDFKL 167

[Close]
BLAST of CsGy4G004180 vs. TAIR10
Match: AT3G21870.1 (cyclin p2;1)

HSP 1 Score: 127.5 bits (319), Expect = 7.6e-30
Identity = 64/146 (43.84%), Postives = 98/146 (67.12%), Query Frame = 0 

Query: 11  PKVINYLSSVLQRVSDSND---KENRMITKRNNSGFDGISRPSISIQSYLERIFKYANCS 70
           P+V+  +S V++++   N+   K+ +   K +   F G+  PSISI  YLERI+KY  CS
Sbjct: 25  PRVLTIISHVMEKLVARNEWLAKQTKGFGK-SLEAFHGVRAPSISIAKYLERIYKYTKCS 84

Query: 71  PSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYYAKVGG 130
           P+CFV  YVY+ R  H  HP +L + S NVHRLL+T V+++AK  DD++YNN +YA+VGG
Sbjct: 85  PACFVVGYVYIDRLAHK-HPGSL-VVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGG 144

Query: 131 ISTMEMNHLELDFLFGLRFQLNKCYQ 154
           +S  ++N +EL+ LF L F++   ++
Sbjct: 145 VSNADLNKMELELLFLLDFRVTVSFR 167

[Close]
BLAST of CsGy4G004180 vs. Swiss-Prot
Match: sp|O80513|CCU41_ARATH (Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 4.6e-48
Identity = 102/150 (68.00%), Postives = 119/150 (79.33%), Query Frame = 0 

Query: 1   MGEKEGMVGIPKVINYLSSVLQRVSDSNDKENRMITKRNN-SGFDGISRPSISIQSYLER 60
           M E E    + K+I +LSS+L+RV++SND   R+ T+    S F G+SRP+I+IQSYLER
Sbjct: 1   MAELENPSVMSKLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLER 60

Query: 61  IFKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNN 120
           IFKYANCSPSCFV AYVYL RF   H   +L I+SFNVHRLLITSV+V+AKF DDLYYNN
Sbjct: 61  IFKYANCSPSCFVVAYVYLDRF--THRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNN 120

Query: 121 AYYAKVGGISTMEMNHLELDFLFGLRFQLN 150
           AYYAKVGGIST EMN LELDFLFGL F+LN
Sbjct: 121 AYYAKVGGISTKEMNFLELDFLFGLGFELN 148

[Close]
BLAST of CsGy4G004180 vs. Swiss-Prot
Match: sp|Q9LY16|CCU42_ARATH (Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 4.1e-41
Identity = 89/148 (60.14%), Postives = 112/148 (75.68%), Query Frame = 0 

Query: 10  IPKVINYLSSVLQRVSDSNDKENRMITKRNN-SGFDGISRPSISIQSYLERIFKYANCSP 69
           +P VI  +SS+LQRVS++ND  +R   +    S F+ +++PSISI+SY+ERIFKYA+CS 
Sbjct: 20  MPNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTKPSISIRSYMERIFKYADCSD 79

Query: 70  SCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYYAKVGGI 129
           SC++ AY+YL RF+       L IDS NVHRL+ITSVLVSAKF DDL YNNA+YAKVGGI
Sbjct: 80  SCYIVAYIYLDRFIQKQ--PLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAFYAKVGGI 139

Query: 130 STMEMNHLELDFLFGLRFQLNKCYQQHN 157
           +T EMN LELDFLFG+ FQLN     +N
Sbjct: 140 TTEEMNLLELDFLFGIGFQLNVTISTYN 165

[Close]
BLAST of CsGy4G004180 vs. Swiss-Prot
Match: sp|Q9FKF6|CCU43_ARATH (Cyclin-U4-3 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-3 PE=1 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 2.7e-40
Identity = 87/140 (62.14%), Postives = 108/140 (77.14%), Query Frame = 0 

Query: 10  IPKVINYLSSVLQRVSDSNDKENRMITKRNNSGFDGISRPSISIQSYLERIFKYANCSPS 69
           +P V+  +S +LQRVS++ND    +  K+  S F G+++PSISI+SYLERIF+YANCS S
Sbjct: 22  MPSVLTAMSYLLQRVSETND---NLSQKQKPSSFTGVTKPSISIRSYLERIFEYANCSYS 81

Query: 70  CFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYYAKVGGIS 129
           C++ AY+YL RF+       L I+SFNVHRL+ITSVLVSAKF DDL YNN YYAKVGGIS
Sbjct: 82  CYIVAYIYLDRFVKKQ--PFLPINSFNVHRLIITSVLVSAKFMDDLSYNNEYYAKVGGIS 141

Query: 130 TMEMNHLELDFLFGLRFQLN 150
             EMN LELDFLFG+ F+LN
Sbjct: 142 REEMNMLELDFLFGIGFELN 156

[Close]
BLAST of CsGy4G004180 vs. Swiss-Prot
Match: sp|Q7XC35|CCP41_ORYSJ (Cyclin-P4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP4-1 PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.2e-37
Identity = 81/144 (56.25%), Postives = 103/144 (71.53%), Query Frame = 0 

Query: 10  IPKVINYLSSVLQRVSDSNDKENRMITKRNN----SGFDGISRPSISIQSYLERIFKYAN 69
           +P+V+  LSS+LQRV++                  S F G+++P+ISI  YLERIF++AN
Sbjct: 10  VPRVVAILSSLLQRVAERXXXXXXXXXXXXXXXXVSAFQGLTKPAISIGGYLERIFRFAN 69

Query: 70  CSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYYAKV 129
           CSPSC+V AY+YL RFL       L +DSFNVHRLLITSVL + KF DD+ YNNAY+A+V
Sbjct: 70  CSPSCYVVAYIYLDRFLRRR--PALAVDSFNVHRLLITSVLTAVKFVDDICYNNAYFARV 129

Query: 130 GGISTMEMNHLELDFLFGLRFQLN 150
           GGIS MEMN+LE+DFLFG+ F LN
Sbjct: 130 GGISLMEMNYLEVDFLFGIAFDLN 151

[Close]
BLAST of CsGy4G004180 vs. Swiss-Prot
Match: sp|Q75HV0|CCP31_ORYSJ (Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.1e-30
Identity = 73/146 (50.00%), Postives = 100/146 (68.49%), Query Frame = 0 

Query: 4   KEGMVGIPKVINYLSSVLQR-VSDSNDKENRMITKRNNSGFDGISRPSISIQSYLERIFK 63
           K+     PKV+  L++ L R V  + D  +    K +++ F G   P +SI+ Y ERIFK
Sbjct: 29  KKNNTEYPKVLLLLAAYLDRSVQKNEDLLDSNKIKDSSTIFHGHRAPDLSIKLYAERIFK 88

Query: 64  YANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYY 123
           Y+ CSPSCFV A +Y+ R+L   H   +++ S +VHRLLITSV+V+AKF DD ++NNA+Y
Sbjct: 89  YSECSPSCFVLALIYMERYLQQPH---VYMTSLSVHRLLITSVVVAAKFTDDAFFNNAFY 148

Query: 124 AKVGGISTMEMNHLELDFLFGLRFQL 149
           A+VGGIST+EMN LELD LF L F+L
Sbjct: 149 ARVGGISTVEMNRLELDLLFNLDFRL 171

[Close]
BLAST of CsGy4G004180 vs. TrEMBL
Match: tr|A0A0A0KZ83|A0A0A0KZ83_CUCSA (Cyclin OS=Cucumis sativus OX=3659 GN=Csa_4G025110 PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 6.3e-79
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0 

Query: 1   MGEKEGMVGIPKVINYLSSVLQRVSDSNDKENRMITKRNNSGFDGISRPSISIQSYLERI 60
           MGEKEGMVGIPKVINYLSSVLQRVSDSNDKENRMITKRNNSGFDGISRPSISIQSYLERI
Sbjct: 1   MGEKEGMVGIPKVINYLSSVLQRVSDSNDKENRMITKRNNSGFDGISRPSISIQSYLERI 60

Query: 61  FKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNA 120
           FKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNA
Sbjct: 61  FKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNA 120

Query: 121 YYAKVGGISTMEMNHLELDFLFGLRFQLN 150
           YYAKVGGISTMEMNHLELDFLFGLRFQLN
Sbjct: 121 YYAKVGGISTMEMNHLELDFLFGLRFQLN 149

[Close]
BLAST of CsGy4G004180 vs. TrEMBL
Match: tr|A0A078IDY0|A0A078IDY0_BRANA (Cyclin OS=Brassica napus OX=3708 GN=BnaC04g05160D PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.9e-47
Identity = 105/150 (70.00%), Postives = 120/150 (80.00%), Query Frame = 0 

Query: 1   MGEKEGMVGIPKVINYLSSVLQRVSDSNDKENRMITKRNN-SGFDGISRPSISIQSYLER 60
           M E E    +PK+I +LSS+L+RVS+SND   R+ T+  + S FDG+SRPSI++QSYLER
Sbjct: 1   MAELENPGVMPKLIAFLSSLLERVSESNDLTRRVATQSQSVSVFDGLSRPSITVQSYLER 60

Query: 61  IFKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNN 120
           IFKYANCSPSCFV AYVYL RF   H   +L I+SFNVHRLLITSV+VSAKF DD YYNN
Sbjct: 61  IFKYANCSPSCFVVAYVYLDRF--THRQPSLPINSFNVHRLLITSVMVSAKFLDDRYYNN 120

Query: 121 AYYAKVGGISTMEMNHLELDFLFGLRFQLN 150
           AYYAKVGGIST EMN LELDFLFGL F LN
Sbjct: 121 AYYAKVGGISTKEMNLLELDFLFGLGFDLN 148

[Close]
BLAST of CsGy4G004180 vs. TrEMBL
Match: tr|A0A1J3ICY1|A0A1J3ICY1_NOCCA (Cyclin OS=Noccaea caerulescens OX=107243 GN=LC_TR11338_c0_g1_i1_g.39918 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 3.7e-47
Identity = 104/150 (69.33%), Postives = 120/150 (80.00%), Query Frame = 0 

Query: 1   MGEKEGMVGIPKVINYLSSVLQRVSDSNDKENRMITKRNN-SGFDGISRPSISIQSYLER 60
           M E E    +PK+I +LSS+L+RV++SND+  R+ T+    S F G+SRP+I+IQSYLER
Sbjct: 1   MAELENPAVMPKLIAFLSSLLERVAESNDQTRRVTTQSQRVSVFHGLSRPAITIQSYLER 60

Query: 61  IFKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNN 120
           IFKYANCSPSCFV AYVYL RF   H   +L I+SFNVHRLLITSV+VSAKF DDLYYNN
Sbjct: 61  IFKYANCSPSCFVVAYVYLDRF--THRQPSLPINSFNVHRLLITSVMVSAKFLDDLYYNN 120

Query: 121 AYYAKVGGISTMEMNHLELDFLFGLRFQLN 150
           AYYAKVGGIST EMN LELDFLFGL F LN
Sbjct: 121 AYYAKVGGISTKEMNLLELDFLFGLGFDLN 148

[Close]
BLAST of CsGy4G004180 vs. TrEMBL
Match: tr|A0A1J3D1B3|A0A1J3D1B3_NOCCA (Cyclin OS=Noccaea caerulescens OX=107243 GN=GA_TR9410_c0_g1_i1_g.29746 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 3.7e-47
Identity = 104/150 (69.33%), Postives = 120/150 (80.00%), Query Frame = 0 

Query: 1   MGEKEGMVGIPKVINYLSSVLQRVSDSNDKENRMITKRNN-SGFDGISRPSISIQSYLER 60
           M E E    +PK+I +LSS+L+RV++SND+  R+ T+    S F G+SRP+I+IQSYLER
Sbjct: 1   MAELENPAVMPKLIAFLSSLLERVAESNDQTRRVTTQSQRVSVFHGLSRPAITIQSYLER 60

Query: 61  IFKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNN 120
           IFKYANCSPSCFV AYVYL RF   H   +L I+SFNVHRLLITSV+VSAKF DDLYYNN
Sbjct: 61  IFKYANCSPSCFVVAYVYLDRF--THRQPSLPINSFNVHRLLITSVMVSAKFLDDLYYNN 120

Query: 121 AYYAKVGGISTMEMNHLELDFLFGLRFQLN 150
           AYYAKVGGIST EMN LELDFLFGL F LN
Sbjct: 121 AYYAKVGGISTKEMNLLELDFLFGLGFDLN 148

[Close]
BLAST of CsGy4G004180 vs. TrEMBL
Match: tr|A0A2C9VSH5|A0A2C9VSH5_MANES (Cyclin OS=Manihot esculenta OX=3983 GN=MANES_06G130300 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 6.4e-47
Identity = 103/149 (69.13%), Postives = 121/149 (81.21%), Query Frame = 0 

Query: 1   MGEKEGMVGIPKVINYLSSVLQRVSDSNDKENRMITKRNNSGFDGISRPSISIQSYLERI 60
           M + E  V +PK+I +LSS+LQRV++SND  +++  +R  S F G++RP+ISIQSYLERI
Sbjct: 1   MADLEATVVMPKIITFLSSLLQRVAESNDHTHQLHPQR-ISVFHGLTRPNISIQSYLERI 60

Query: 61  FKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNA 120
           FKYANCSPSCFV AYVYL RF H     +  I+SFNVHRLLITSVLVSAKF DD+YYNNA
Sbjct: 61  FKYANCSPSCFVVAYVYLDRFAHKQ--PSFPINSFNVHRLLITSVLVSAKFLDDIYYNNA 120

Query: 121 YYAKVGGISTMEMNHLELDFLFGLRFQLN 150
           YYAKVGGIST EMN LE+DFLFGL FQLN
Sbjct: 121 YYAKVGGISTAEMNLLEVDFLFGLGFQLN 146

The following BLAST results are available for this feature:
BLAST of CsGy4G004180 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004146934.19.6e-79100.00PREDICTED: cyclin-U4-1-like [Cucumis sativus] >KGN53181.1 hypothetical protein C... [more]
XP_022992955.11.1e-4772.54cyclin-U4-1-like [Cucurbita maxima][more]
XP_022941693.12.5e-4773.94cyclin-U4-1-like [Cucurbita moschata][more]
CDY48257.14.3e-4770.00BnaC04g05160D [Brassica napus][more]
XP_021616472.19.6e-4769.13cyclin-U4-1-like [Manihot esculenta] >OAY48086.1 hypothetical protein MANES_06G1... [more]
BLAST of CsGy4G004180 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G44740.12.5e-4968.00cyclin p4;1[more]
AT5G07450.12.3e-4260.14cyclin p4;3[more]
AT5G61650.11.5e-4162.14CYCLIN P4;2[more]
AT3G63120.11.2e-3048.92cyclin p1;1[more]
AT3G21870.17.6e-3043.84cyclin p2;1[more]
BLAST of CsGy4G004180 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O80513|CCU41_ARATH4.6e-4868.00Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1[more]
sp|Q9LY16|CCU42_ARATH4.1e-4160.14Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1[more]
sp|Q9FKF6|CCU43_ARATH2.7e-4062.14Cyclin-U4-3 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-3 PE=1 SV=1[more]
sp|Q7XC35|CCP41_ORYSJ1.2e-3756.25Cyclin-P4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP4-1 PE=2 SV=1[more]
sp|Q75HV0|CCP31_ORYSJ1.1e-3050.00Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1[more]
BLAST of CsGy4G004180 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KZ83|A0A0A0KZ83_CUCSA6.3e-79100.00Cyclin OS=Cucumis sativus OX=3659 GN=Csa_4G025110 PE=3 SV=1[more]
tr|A0A078IDY0|A0A078IDY0_BRANA2.9e-4770.00Cyclin OS=Brassica napus OX=3708 GN=BnaC04g05160D PE=3 SV=1[more]
tr|A0A1J3ICY1|A0A1J3ICY1_NOCCA3.7e-4769.33Cyclin OS=Noccaea caerulescens OX=107243 GN=LC_TR11338_c0_g1_i1_g.39918 PE=3 SV=... [more]
tr|A0A1J3D1B3|A0A1J3D1B3_NOCCA3.7e-4769.33Cyclin OS=Noccaea caerulescens OX=107243 GN=GA_TR9410_c0_g1_i1_g.29746 PE=3 SV=1[more]
tr|A0A2C9VSH5|A0A2C9VSH5_MANES6.4e-4769.13Cyclin OS=Manihot esculenta OX=3983 GN=MANES_06G130300 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0000079regulation of cyclin-dependent protein serine/threonine kinase activity
Vocabulary: Molecular Function
TermDefinition
GO:0019901protein kinase binding
Vocabulary: INTERPRO
TermDefinition
IPR036915Cyclin-like_sf
IPR013922Cyclin_PHO80-like
IPR012389Cyclin_P/U
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity
cellular_component GO:0005575 cellular_component
molecular_function GO:0019901 protein kinase binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G004180.1CsGy4G004180.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012389Cyclin P/UPIRSFPIRSF027110PREGcoord: 3..160
e-value: 9.2E-63
score: 209.7
IPR013922Cyclin PHO80-likePFAMPF08613Cyclincoord: 22..148
e-value: 1.7E-39
score: 135.6
NoneNo IPR availableGENE3DG3DSA:1.10.472.10coord: 7..164
e-value: 7.9E-52
score: 178.1
NoneNo IPR availablePANTHERPTHR15615UNCHARACTERIZEDcoord: 4..152
NoneNo IPR availablePANTHERPTHR15615:SF28CYCLIN-U4-1-RELATEDcoord: 4..152
IPR036915Cyclin-like superfamilySUPERFAMILYSSF47954Cyclin-likecoord: 55..149

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy4G004180Csa4G025110Cucumber (Chinese Long) v2cgybcuB165
CsGy4G004180MELO3C017631Melon (DHL92) v3.5.1cgybmeB269
CsGy4G004180ClCG07G017150Watermelon (Charleston Gray)cgybwcgB297
CsGy4G004180CSPI04G04260Wild cucumber (PI 183967)cgybcpiB168
CsGy4G004180CmaCh04G003710Cucurbita maxima (Rimu)cgybcmaB542
CsGy4G004180CmoCh04G003910Cucurbita moschata (Rifu)cgybcmoB516
CsGy4G004180Lsi07G001330Bottle gourd (USVL1VR-Ls)cgyblsiB277
CsGy4G004180Cp4.1LG01g03450Cucurbita pepo (Zucchini)cgybcpeB503
CsGy4G004180MELO3C017631.2Melon (DHL92) v3.6.1cgybmedB266
CsGy4G004180CsaV3_4G004350Cucumber (Chinese Long) v3cgybcucB171
CsGy4G004180Cla97C07G144170Watermelon (97103) v2cgybwmbB298
CsGy4G004180Bhi01G001991Wax gourdcgybwgoB361
CsGy4G004180Carg08045Silver-seed gourdcarcgybB0382
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy4G004180Cucumber (Chinese Long) v3cgybcucB184
CsGy4G004180Watermelon (97103) v2cgybwmbB255
CsGy4G004180Cucumber (Gy14) v2cgybcgybB126
CsGy4G004180Cucurbita maxima (Rimu)cgybcmaB493
CsGy4G004180Cucurbita moschata (Rifu)cgybcmoB464
CsGy4G004180Cucurbita moschata (Rifu)cgybcmoB497
CsGy4G004180Cucurbita pepo (Zucchini)cgybcpeB484
CsGy4G004180Cucumber (Chinese Long) v2cgybcuB181
CsGy4G004180Bottle gourd (USVL1VR-Ls)cgyblsiB230
CsGy4G004180Watermelon (Charleston Gray)cgybwcgB266
CsGy4G004180Watermelon (97103) v1cgybwmB290
CsGy4G004180Wild cucumber (PI 183967)cgybcpiB184
CsGy4G004180Silver-seed gourdcarcgybB0708
CsGy4G004180Silver-seed gourdcarcgybB0860