CmaCh04G003710 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G003710
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionCyclin-dependent protein kinase, putative
LocationCma_Chr04 : 1851721 .. 1852866 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATACATTTCAATACAAAAAGCCAAGAAAAAAAAAAAAAACCTGAGCTGTACTTATTCTCCACCCTCTAGATAACTCAGAGCCAGCTGCAATTCCACCCAATTCAAGGCTTTTCAAAACCTCAACAACTTCGAGCTCCATCAATGGCAGACTTAGATCACCGTAATCAAATGGCCGTTCCAATTCCCAAAGTCATCACTTTCCTGTCGTCCCTTTTGCAGAGGGTGTCGGAGTCCAATGATCAAAGCCATGAGCTTCATAGCGCGGCTAAAGTTTCAGCCTTTCATGGCTTGACAAAGCCCACCATTTCGATCCAAACCTACTTGGAGAGGATATTTAAGTACGCTAATTGCAGCCCCAGCTGCTTCGTTGTGGCTTATGTTTATCTCGATCGGCTCGTTCAGCGCCACCCTTCTTTGCCCATTGATTCCTTCAATGTTCATCGGCTTCTCATTACCAGTGTTCTTGTTTCCGCCAAGTTCTTGGATGACTTGTAAGCTTTTTTTTCTTTTTTTCTTTTTTTAATTTGTTCAATTGGGTTCTAATTATTCCCAGTCTACTTGATTTTCGGGTCGAGTTCGGTCCCGGATCTCAGGTTTCGGGTCTCGGATTTCGATTCTTCTTCTTCATAGGGTTCGATAGAATATTAAATTTTTATGATTTTTTTTATTTTCAGGTGTTACAATAATGCCTACTATGCGAAAGTGGGTGGAATAAGCACGATGGAGATGAACCTTCTTGAAATCGATTTCTTATTTGGTTTAGGGTTCCAACTTAACGTGACACCGAACACTTTTCACACTTATTGTTCTTATCTCCGAGCGGAAGTGTTATCGACGCAATCCAATCTTCCGATCCCCATAAAATTTTATTCCTTTCCCGAAGATGAAGCGTCGCATAAAAAACAATTGATAGCTTAAATCAAATGAAATGATCGATCATATGCGATCGTGGCAAGGCACAACGGGCTCTCCCTTGGCGCTTAGTCGTTAAATTAGCTAGAAGTTTTTGAGGTGGGGATGTGGGCCTTTTGGGCTTAAATGTGGGCTTTTTTGGGCCCAAGAAGCCACCCTAATTTGCTTCTCTTGTAGTTGGACATTTTTGCCCTCCATGTCTATTGTGTAGAATTGTATTTTGGTTGTTTGTAA

mRNA sequence

ATACATTTCAATACAAAAAGCCAAGAAAAAAAAAAAAAACCTGAGCTGTACTTATTCTCCACCCTCTAGATAACTCAGAGCCAGCTGCAATTCCACCCAATTCAAGGCTTTTCAAAACCTCAACAACTTCGAGCTCCATCAATGGCAGACTTAGATCACCGTAATCAAATGGCCGTTCCAATTCCCAAAGTCATCACTTTCCTGTCGTCCCTTTTGCAGAGGGTGTCGGAGTCCAATGATCAAAGCCATGAGCTTCATAGCGCGGCTAAAGTTTCAGCCTTTCATGGCTTGACAAAGCCCACCATTTCGATCCAAACCTACTTGGAGAGGATATTTAAGTACGCTAATTGCAGCCCCAGCTGCTTCGTTGTGGCTTATGTTTATCTCGATCGGCTCGTTCAGCGCCACCCTTCTTTGCCCATTGATTCCTTCAATGTTCATCGGCTTCTCATTACCAGTGTTCTTGTTTCCGCCAAGTTCTTGGATGACTTGTGTTACAATAATGCCTACTATGCGAAAGTGGGTGGAATAAGCACGATGGAGATGAACCTTCTTGAAATCGATTTCTTATTTGGTTTAGGGTTCCAACTTAACGTGACACCGAACACTTTTCACACTTATTGTTCTTATCTCCGAGCGGAATTGGACATTTTTGCCCTCCATGTCTATTGTGTAGAATTGTATTTTGGTTGTTTGTAA

Coding sequence (CDS)

ATGGCAGACTTAGATCACCGTAATCAAATGGCCGTTCCAATTCCCAAAGTCATCACTTTCCTGTCGTCCCTTTTGCAGAGGGTGTCGGAGTCCAATGATCAAAGCCATGAGCTTCATAGCGCGGCTAAAGTTTCAGCCTTTCATGGCTTGACAAAGCCCACCATTTCGATCCAAACCTACTTGGAGAGGATATTTAAGTACGCTAATTGCAGCCCCAGCTGCTTCGTTGTGGCTTATGTTTATCTCGATCGGCTCGTTCAGCGCCACCCTTCTTTGCCCATTGATTCCTTCAATGTTCATCGGCTTCTCATTACCAGTGTTCTTGTTTCCGCCAAGTTCTTGGATGACTTGTGTTACAATAATGCCTACTATGCGAAAGTGGGTGGAATAAGCACGATGGAGATGAACCTTCTTGAAATCGATTTCTTATTTGGTTTAGGGTTCCAACTTAACGTGACACCGAACACTTTTCACACTTATTGTTCTTATCTCCGAGCGGAATTGGACATTTTTGCCCTCCATGTCTATTGTGTAGAATTGTATTTTGGTTGTTTGTAA

Protein sequence

MADLDHRNQMAVPIPKVITFLSSLLQRVSESNDQSHELHSAAKVSAFHGLTKPTISIQTYLERIFKYANCSPSCFVVAYVYLDRLVQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYNNAYYAKVGGISTMEMNLLEIDFLFGLGFQLNVTPNTFHTYCSYLRAELDIFALHVYCVELYFGCL
Homology
[Close]
BLAST of CmaCh04G003710 vs. Swiss-Prot
Match: CCU41_ARATH (Cyclin-U4-1 OS=Arabidopsis thaliana GN=CYCU4-1 PE=1 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 7.3e-63
Identity = 120/171 (70.18%), Postives = 146/171 (85.38%), Query Frame = 1 

Query: 1   MADLDHRNQMAVPIPKVITFLSSLLQRVSESNDQSHELHSAA-KVSAFHGLTKPTISIQT 60
           MA+L++ + M+    K+I FLSSLL+RV+ESND +  + + + +VS FHGL++PTI+IQ+
Sbjct: 1   MAELENPSVMS----KLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQS 60

Query: 61  YLERIFKYANCSPSCFVVAYVYLDRLVQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCY 120
           YLERIFKYANCSPSCFVVAYVYLDR   R PSLPI+SFNVHRLLITSV+V+AKFLDDL Y
Sbjct: 61  YLERIFKYANCSPSCFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYY 120

Query: 121 NNAYYAKVGGISTMEMNLLEIDFLFGLGFQLNVTPNTFHTYCSYLRAELDI 171
           NNAYYAKVGGIST EMN LE+DFLFGLGF+LNVTPNTF+ Y SYL+ E+ +
Sbjct: 121 NNAYYAKVGGISTKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTL 167

[Close]
BLAST of CmaCh04G003710 vs. Swiss-Prot
Match: CCU42_ARATH (Cyclin-U4-2 OS=Arabidopsis thaliana GN=CYCU4-2 PE=1 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 7.0e-58
Identity = 108/160 (67.50%), Postives = 136/160 (85.00%), Query Frame = 1 

Query: 10  MAVPIPKVITFLSSLLQRVSESNDQ-SHELHSAAKVSAFHGLTKPTISIQTYLERIFKYA 69
           MA  +P VIT +SSLLQRVSE+ND  S       ++SAF+ +TKP+ISI++Y+ERIFKYA
Sbjct: 16  MAEIMPNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTKPSISIRSYMERIFKYA 75

Query: 70  NCSPSCFVVAYVYLDRLVQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYNNAYYAKVG 129
           +CS SC++VAY+YLDR +Q+ P LPIDS NVHRL+ITSVLVSAKF+DDLCYNNA+YAKVG
Sbjct: 76  DCSDSCYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAFYAKVG 135

Query: 130 GISTMEMNLLEIDFLFGLGFQLNVTPNTFHTYCSYLRAEL 169
           GI+T EMNLLE+DFLFG+GFQLNVT +T++ YCS L+ E+
Sbjct: 136 GITTEEMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREM 175

[Close]
BLAST of CmaCh04G003710 vs. Swiss-Prot
Match: CCP41_ORYSJ (Cyclin-P4-1 OS=Oryza sativa subsp. japonica GN=CYCP4-1 PE=2 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 6.6e-56
Identity = 104/164 (63.41%), Postives = 131/164 (79.88%), Query Frame = 1 

Query: 9   QMAVPIPKVITFLSSLLQRVSESNDQSHEL----HSAAKVSAFHGLTKPTISIQTYLERI 68
           ++A  +P+V+  LSSLLQRV+E ND +         AA VSAF GLTKP ISI  YLERI
Sbjct: 5   EVAEAVPRVVAILSSLLQRVAERNDAAAAAAAVGEEAAAVSAFQGLTKPAISIGGYLERI 64

Query: 69  FKYANCSPSCFVVAYVYLDRLVQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYNNAYY 128
           F++ANCSPSC+VVAY+YLDR ++R P+L +DSFNVHRLLITSVL + KF+DD+CYNNAY+
Sbjct: 65  FRFANCSPSCYVVAYIYLDRFLRRRPALAVDSFNVHRLLITSVLTAVKFVDDICYNNAYF 124

Query: 129 AKVGGISTMEMNLLEIDFLFGLGFQLNVTPNTFHTYCSYLRAEL 169
           A+VGGIS MEMN LE+DFLFG+ F LNVTP  F +YC+ L++E+
Sbjct: 125 ARVGGISLMEMNYLEVDFLFGIAFDLNVTPAAFASYCAVLQSEM 168

[Close]
BLAST of CmaCh04G003710 vs. Swiss-Prot
Match: CCU43_ARATH (Cyclin-U4-3 OS=Arabidopsis thaliana GN=CYCU4-3 PE=1 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.5e-55
Identity = 105/164 (64.02%), Postives = 134/164 (81.71%), Query Frame = 1 

Query: 5   DHRNQMAVPIPKVITFLSSLLQRVSESNDQSHELHSAAKVSAFHGLTKPTISIQTYLERI 64
           D +  +A  +P V+T +S LLQRVSE+ND    L    K S+F G+TKP+ISI++YLERI
Sbjct: 13  DLQEPLAEIMPSVLTAMSYLLQRVSETNDN---LSQKQKPSSFTGVTKPSISIRSYLERI 72

Query: 65  FKYANCSPSCFVVAYVYLDRLVQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYNNAYY 124
           F+YANCS SC++VAY+YLDR V++ P LPI+SFNVHRL+ITSVLVSAKF+DDL YNN YY
Sbjct: 73  FEYANCSYSCYIVAYIYLDRFVKKQPFLPINSFNVHRLIITSVLVSAKFMDDLSYNNEYY 132

Query: 125 AKVGGISTMEMNLLEIDFLFGLGFQLNVTPNTFHTYCSYLRAEL 169
           AKVGGIS  EMN+LE+DFLFG+GF+LNVT +TF+ YC +L+ E+
Sbjct: 133 AKVGGISREEMNMLELDFLFGIGFELNVTVSTFNNYCCFLQREM 173

[Close]
BLAST of CmaCh04G003710 vs. Swiss-Prot
Match: CCU11_ARATH (Cyclin-U1-1 OS=Arabidopsis thaliana GN=CYCU1-1 PE=1 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 4.0e-37
Identity = 70/158 (44.30%), Postives = 107/158 (67.72%), Query Frame = 1 

Query: 15  PKVITFLSSLLQRVSESND--QSHELHSAAKVSAFHGLTKPTISIQTYLERIFKYANCSP 74
           P+V+T +S +++++   N+            + AFHG+  P+ISI  YLERI+KY  CSP
Sbjct: 25  PRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTKCSP 84

Query: 75  SCFVVAYVYLDRLVQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYNNAYYAKVGGIST 134
           +CFVV YVY+DRL  +HP   + S NVHRLL+T V+++AK LDD+ YNN +YA+VGG+S 
Sbjct: 85  ACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGGVSN 144

Query: 135 MEMNLLEIDFLFGLGFQLNVTPNTFHTYCSYLRAELDI 171
            ++N +E++ LF L F++ V+   F +YC +L  E+ +
Sbjct: 145 ADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEMQL 182

[Close]
BLAST of CmaCh04G003710 vs. TrEMBL
Match: B9RA01_RICCO (Cyclin-dependent protein kinase, putative OS=Ricinus communis GN=RCOM_1502450 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 4.7e-69
Identity = 130/168 (77.38%), Postives = 149/168 (88.69%), Query Frame = 1 

Query: 1   MADLDHRNQMAVPIPKVITFLSSLLQRVSESNDQSHELHSAAKVSAFHGLTKPTISIQTY 60
           MADL+      V +PKV+TFLSSLLQRV+ESND SH+LH   ++S FHGLT+P+IS+Q+Y
Sbjct: 1   MADLE---ATVVVMPKVVTFLSSLLQRVAESNDLSHQLHPQ-RISVFHGLTRPSISVQSY 60

Query: 61  LERIFKYANCSPSCFVVAYVYLDRLVQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYN 120
           LERIFKYANCSPSCFV+AYVYLDR  QR PS PI+SFNVHRLLITSVLVSAKF+DD+ YN
Sbjct: 61  LERIFKYANCSPSCFVIAYVYLDRFAQRQPSFPINSFNVHRLLITSVLVSAKFMDDIYYN 120

Query: 121 NAYYAKVGGISTMEMNLLEIDFLFGLGFQLNVTPNTFHTYCSYLRAEL 169
           NAYYAKVGGIST EMN+LE+DFLFGLGFQLNVTPNTFHTYCSYL+ E+
Sbjct: 121 NAYYAKVGGISTSEMNILEVDFLFGLGFQLNVTPNTFHTYCSYLQREM 164

[Close]
BLAST of CmaCh04G003710 vs. TrEMBL
Match: A0A067JI41_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26314 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 4.9e-66
Identity = 129/168 (76.79%), Postives = 144/168 (85.71%), Query Frame = 1 

Query: 1   MADLDHRNQMAVPIPKVITFLSSLLQRVSESNDQSHELHSAAKVSAFHGLTKPTISIQTY 60
           MADL+    M    PKVI+FLSSLLQRV+ESND   +L+   ++S FHGLT+P ISIQTY
Sbjct: 1   MADLEASEAM----PKVISFLSSLLQRVAESNDLRSQLYPQ-RISVFHGLTRPNISIQTY 60

Query: 61  LERIFKYANCSPSCFVVAYVYLDRLVQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYN 120
           LERIFKYANCSPSCFVVAYVYLDR  QR PSLPI+SFNVHRLLITSVLVSAKF+DD+ YN
Sbjct: 61  LERIFKYANCSPSCFVVAYVYLDRFAQRQPSLPINSFNVHRLLITSVLVSAKFMDDIYYN 120

Query: 121 NAYYAKVGGISTMEMNLLEIDFLFGLGFQLNVTPNTFHTYCSYLRAEL 169
           NAYYAKVGGIST EMN+LE+DFLFGLGFQLNV P TFHTYCSYL+ E+
Sbjct: 121 NAYYAKVGGISTAEMNVLEVDFLFGLGFQLNVAPTTFHTYCSYLQREM 163

[Close]
BLAST of CmaCh04G003710 vs. TrEMBL
Match: B9SKL0_RICCO (Cyclin-dependent protein kinase, putative OS=Ricinus communis GN=RCOM_0658420 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 6.4e-66
Identity = 126/168 (75.00%), Postives = 147/168 (87.50%), Query Frame = 1 

Query: 1   MADLDHRNQMAVPIPKVITFLSSLLQRVSESNDQSHELHSAAKVSAFHGLTKPTISIQTY 60
           MA+L+  N M    PK+ITFLSSLLQRV+ESND + ++H+  K+S FHGLT+PTISIQ Y
Sbjct: 1   MAELESPNLM----PKLITFLSSLLQRVAESNDLNLQIHTQ-KISVFHGLTRPTISIQNY 60

Query: 61  LERIFKYANCSPSCFVVAYVYLDRLVQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYN 120
           LERIFKYANCSPSCF+VAYVYLDR  QR PSLP++SFNVHRLLITSV+V+AKF+DD+ YN
Sbjct: 61  LERIFKYANCSPSCFIVAYVYLDRFAQRQPSLPLNSFNVHRLLITSVMVAAKFMDDMYYN 120

Query: 121 NAYYAKVGGISTMEMNLLEIDFLFGLGFQLNVTPNTFHTYCSYLRAEL 169
           NAYYAKVGGIST+EMN LE+DFLFGLGF LNVTPNTFHTY SYL+ E+
Sbjct: 121 NAYYAKVGGISTIEMNYLEVDFLFGLGFHLNVTPNTFHTYSSYLQREM 163

[Close]
BLAST of CmaCh04G003710 vs. TrEMBL
Match: A0A067JY35_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14652 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 1.4e-65
Identity = 127/168 (75.60%), Postives = 145/168 (86.31%), Query Frame = 1 

Query: 1   MADLDHRNQMAVPIPKVITFLSSLLQRVSESNDQSHELHSAAKVSAFHGLTKPTISIQTY 60
           MA+L+  N M     K+ITFLSSLLQRV+ESND + +     K+S FHGLT+PTISIQ+Y
Sbjct: 1   MAELESPNVMQ----KLITFLSSLLQRVAESNDLNSQFQPQ-KISVFHGLTRPTISIQSY 60

Query: 61  LERIFKYANCSPSCFVVAYVYLDRLVQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYN 120
           LERIFKYANCSPSCF+VAYVYLDR  QR PSLPI+SFNVHRLLITSVLV+AKF+DD+ YN
Sbjct: 61  LERIFKYANCSPSCFIVAYVYLDRFAQRQPSLPINSFNVHRLLITSVLVAAKFMDDMYYN 120

Query: 121 NAYYAKVGGISTMEMNLLEIDFLFGLGFQLNVTPNTFHTYCSYLRAEL 169
           NAYYAKVGGIST+EMN LE+DFLFGLGF LNVTPNTFHTYCSYL+ E+
Sbjct: 121 NAYYAKVGGISTIEMNYLEVDFLFGLGFHLNVTPNTFHTYCSYLQREM 163

[Close]
BLAST of CmaCh04G003710 vs. TrEMBL
Match: B9MV61_POPTR (Cyclin family protein OS=Populus trichocarpa GN=POPTR_0014s04930g PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 2.4e-65
Identity = 127/168 (75.60%), Postives = 143/168 (85.12%), Query Frame = 1 

Query: 1   MADLDHRNQMAVPIPKVITFLSSLLQRVSESNDQSHELHSAAKVSAFHGLTKPTISIQTY 60
           MA+L+    M    PK ITFLSSLLQRV++SND + E     K+S FHGLT+PTISIQ+Y
Sbjct: 1   MAELESTKMM----PKSITFLSSLLQRVADSNDLNREFQPQ-KISVFHGLTRPTISIQSY 60

Query: 61  LERIFKYANCSPSCFVVAYVYLDRLVQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYN 120
           LERIFKYANCSPSCFVVAYVYLDR  QR PSLPI+S NVHRLLITSVLVSAKF+DD+ YN
Sbjct: 61  LERIFKYANCSPSCFVVAYVYLDRFAQRQPSLPINSLNVHRLLITSVLVSAKFMDDMYYN 120

Query: 121 NAYYAKVGGISTMEMNLLEIDFLFGLGFQLNVTPNTFHTYCSYLRAEL 169
           NAYYA+VGGIST+EMN LE+DFLFGLGF LNVTPNTFHTYCSYL+ E+
Sbjct: 121 NAYYARVGGISTIEMNYLEVDFLFGLGFNLNVTPNTFHTYCSYLQREM 163

[Close]
BLAST of CmaCh04G003710 vs. TAIR10
Match: AT2G44740.1 (AT2G44740.1 cyclin p4;1)

HSP 1 Score: 241.5 bits (615), Expect = 4.1e-64
Identity = 120/171 (70.18%), Postives = 146/171 (85.38%), Query Frame = 1 

Query: 1   MADLDHRNQMAVPIPKVITFLSSLLQRVSESNDQSHELHSAA-KVSAFHGLTKPTISIQT 60
           MA+L++ + M+    K+I FLSSLL+RV+ESND +  + + + +VS FHGL++PTI+IQ+
Sbjct: 1   MAELENPSVMS----KLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQS 60

Query: 61  YLERIFKYANCSPSCFVVAYVYLDRLVQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCY 120
           YLERIFKYANCSPSCFVVAYVYLDR   R PSLPI+SFNVHRLLITSV+V+AKFLDDL Y
Sbjct: 61  YLERIFKYANCSPSCFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYY 120

Query: 121 NNAYYAKVGGISTMEMNLLEIDFLFGLGFQLNVTPNTFHTYCSYLRAELDI 171
           NNAYYAKVGGIST EMN LE+DFLFGLGF+LNVTPNTF+ Y SYL+ E+ +
Sbjct: 121 NNAYYAKVGGISTKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTL 167

[Close]
BLAST of CmaCh04G003710 vs. TAIR10
Match: AT5G07450.1 (AT5G07450.1 cyclin p4;3)

HSP 1 Score: 224.9 bits (572), Expect = 4.0e-59
Identity = 108/160 (67.50%), Postives = 136/160 (85.00%), Query Frame = 1 

Query: 10  MAVPIPKVITFLSSLLQRVSESNDQ-SHELHSAAKVSAFHGLTKPTISIQTYLERIFKYA 69
           MA  +P VIT +SSLLQRVSE+ND  S       ++SAF+ +TKP+ISI++Y+ERIFKYA
Sbjct: 16  MAEIMPNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTKPSISIRSYMERIFKYA 75

Query: 70  NCSPSCFVVAYVYLDRLVQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYNNAYYAKVG 129
           +CS SC++VAY+YLDR +Q+ P LPIDS NVHRL+ITSVLVSAKF+DDLCYNNA+YAKVG
Sbjct: 76  DCSDSCYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAFYAKVG 135

Query: 130 GISTMEMNLLEIDFLFGLGFQLNVTPNTFHTYCSYLRAEL 169
           GI+T EMNLLE+DFLFG+GFQLNVT +T++ YCS L+ E+
Sbjct: 136 GITTEEMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREM 175

[Close]
BLAST of CmaCh04G003710 vs. TAIR10
Match: AT5G61650.1 (AT5G61650.1 CYCLIN P4;2)

HSP 1 Score: 216.5 bits (550), Expect = 1.4e-56
Identity = 105/164 (64.02%), Postives = 134/164 (81.71%), Query Frame = 1 

Query: 5   DHRNQMAVPIPKVITFLSSLLQRVSESNDQSHELHSAAKVSAFHGLTKPTISIQTYLERI 64
           D +  +A  +P V+T +S LLQRVSE+ND    L    K S+F G+TKP+ISI++YLERI
Sbjct: 13  DLQEPLAEIMPSVLTAMSYLLQRVSETNDN---LSQKQKPSSFTGVTKPSISIRSYLERI 72

Query: 65  FKYANCSPSCFVVAYVYLDRLVQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYNNAYY 124
           F+YANCS SC++VAY+YLDR V++ P LPI+SFNVHRL+ITSVLVSAKF+DDL YNN YY
Sbjct: 73  FEYANCSYSCYIVAYIYLDRFVKKQPFLPINSFNVHRLIITSVLVSAKFMDDLSYNNEYY 132

Query: 125 AKVGGISTMEMNLLEIDFLFGLGFQLNVTPNTFHTYCSYLRAEL 169
           AKVGGIS  EMN+LE+DFLFG+GF+LNVT +TF+ YC +L+ E+
Sbjct: 133 AKVGGISREEMNMLELDFLFGIGFELNVTVSTFNNYCCFLQREM 173

[Close]
BLAST of CmaCh04G003710 vs. TAIR10
Match: AT3G21870.1 (AT3G21870.1 cyclin p2;1)

HSP 1 Score: 156.0 bits (393), Expect = 2.3e-38
Identity = 70/158 (44.30%), Postives = 107/158 (67.72%), Query Frame = 1 

Query: 15  PKVITFLSSLLQRVSESND--QSHELHSAAKVSAFHGLTKPTISIQTYLERIFKYANCSP 74
           P+V+T +S +++++   N+            + AFHG+  P+ISI  YLERI+KY  CSP
Sbjct: 25  PRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTKCSP 84

Query: 75  SCFVVAYVYLDRLVQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYNNAYYAKVGGIST 134
           +CFVV YVY+DRL  +HP   + S NVHRLL+T V+++AK LDD+ YNN +YA+VGG+S 
Sbjct: 85  ACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGGVSN 144

Query: 135 MEMNLLEIDFLFGLGFQLNVTPNTFHTYCSYLRAELDI 171
            ++N +E++ LF L F++ V+   F +YC +L  E+ +
Sbjct: 145 ADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEMQL 182

[Close]
BLAST of CmaCh04G003710 vs. TAIR10
Match: AT3G05327.1 (AT3G05327.1 Cyclin family protein)

HSP 1 Score: 150.6 bits (379), Expect = 9.5e-37
Identity = 78/159 (49.06%), Postives = 107/159 (67.30%), Query Frame = 1 

Query: 15  PKVITFLSSLLQRVSESNDQS-HELHSAA-KVSAFHGLTKPTISIQTYLERIFKYANCSP 74
           P+VIT L+S L+++ + N +  H  H+ A +++ FHG   P++SI  Y ERI +YA CSP
Sbjct: 31  PRVITLLASTLEKMIQKNKKKFHTRHNKADEITMFHGSKAPSLSIYRYTERIHRYAQCSP 90

Query: 75  SCFVVAYVYLDRLVQRHPSLP----IDSFNVHRLLITSVLVSAKFLDDLCYNNAYYAKVG 134
            CFV A+ Y+ R +QR  +      + S NVHRLLITS+LV+AKFL+  CYNNAYYAK+G
Sbjct: 91  VCFVAAFAYILRYLQRPEATSTARRLTSLNVHRLLITSLLVAAKFLERQCYNNAYYAKIG 150

Query: 135 GISTMEMNLLEIDFLFGLGFQLNVTPNTFHTYCSYLRAE 168
           G+ST EMN LE  FL  + F+L +T  TF  +C  L+ E
Sbjct: 151 GVSTEEMNRLERTFLVDVDFRLYITTETFEKHCLMLQKE 189

[Close]
BLAST of CmaCh04G003710 vs. NCBI nr
Match: gi|255539923|ref|XP_002511026.1| (PREDICTED: cyclin-U4-1 [Ricinus communis])

HSP 1 Score: 268.9 bits (686), Expect = 6.8e-69
Identity = 130/168 (77.38%), Postives = 149/168 (88.69%), Query Frame = 1 

Query: 1   MADLDHRNQMAVPIPKVITFLSSLLQRVSESNDQSHELHSAAKVSAFHGLTKPTISIQTY 60
           MADL+      V +PKV+TFLSSLLQRV+ESND SH+LH   ++S FHGLT+P+IS+Q+Y
Sbjct: 1   MADLE---ATVVVMPKVVTFLSSLLQRVAESNDLSHQLHPQ-RISVFHGLTRPSISVQSY 60

Query: 61  LERIFKYANCSPSCFVVAYVYLDRLVQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYN 120
           LERIFKYANCSPSCFV+AYVYLDR  QR PS PI+SFNVHRLLITSVLVSAKF+DD+ YN
Sbjct: 61  LERIFKYANCSPSCFVIAYVYLDRFAQRQPSFPINSFNVHRLLITSVLVSAKFMDDIYYN 120

Query: 121 NAYYAKVGGISTMEMNLLEIDFLFGLGFQLNVTPNTFHTYCSYLRAEL 169
           NAYYAKVGGIST EMN+LE+DFLFGLGFQLNVTPNTFHTYCSYL+ E+
Sbjct: 121 NAYYAKVGGISTSEMNILEVDFLFGLGFQLNVTPNTFHTYCSYLQREM 164

[Close]
BLAST of CmaCh04G003710 vs. NCBI nr
Match: gi|802770022|ref|XP_012090519.1| (PREDICTED: cyclin-U4-1 [Jatropha curcas])

HSP 1 Score: 258.8 bits (660), Expect = 7.0e-66
Identity = 129/168 (76.79%), Postives = 144/168 (85.71%), Query Frame = 1 

Query: 1   MADLDHRNQMAVPIPKVITFLSSLLQRVSESNDQSHELHSAAKVSAFHGLTKPTISIQTY 60
           MADL+    M    PKVI+FLSSLLQRV+ESND   +L+   ++S FHGLT+P ISIQTY
Sbjct: 1   MADLEASEAM----PKVISFLSSLLQRVAESNDLRSQLYPQ-RISVFHGLTRPNISIQTY 60

Query: 61  LERIFKYANCSPSCFVVAYVYLDRLVQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYN 120
           LERIFKYANCSPSCFVVAYVYLDR  QR PSLPI+SFNVHRLLITSVLVSAKF+DD+ YN
Sbjct: 61  LERIFKYANCSPSCFVVAYVYLDRFAQRQPSLPINSFNVHRLLITSVLVSAKFMDDIYYN 120

Query: 121 NAYYAKVGGISTMEMNLLEIDFLFGLGFQLNVTPNTFHTYCSYLRAEL 169
           NAYYAKVGGIST EMN+LE+DFLFGLGFQLNV P TFHTYCSYL+ E+
Sbjct: 121 NAYYAKVGGISTAEMNVLEVDFLFGLGFQLNVAPTTFHTYCSYLQREM 163

[Close]
BLAST of CmaCh04G003710 vs. NCBI nr
Match: gi|255571045|ref|XP_002526473.1| (PREDICTED: cyclin-U4-1 [Ricinus communis])

HSP 1 Score: 258.5 bits (659), Expect = 9.2e-66
Identity = 126/168 (75.00%), Postives = 147/168 (87.50%), Query Frame = 1 

Query: 1   MADLDHRNQMAVPIPKVITFLSSLLQRVSESNDQSHELHSAAKVSAFHGLTKPTISIQTY 60
           MA+L+  N M    PK+ITFLSSLLQRV+ESND + ++H+  K+S FHGLT+PTISIQ Y
Sbjct: 1   MAELESPNLM----PKLITFLSSLLQRVAESNDLNLQIHTQ-KISVFHGLTRPTISIQNY 60

Query: 61  LERIFKYANCSPSCFVVAYVYLDRLVQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYN 120
           LERIFKYANCSPSCF+VAYVYLDR  QR PSLP++SFNVHRLLITSV+V+AKF+DD+ YN
Sbjct: 61  LERIFKYANCSPSCFIVAYVYLDRFAQRQPSLPLNSFNVHRLLITSVMVAAKFMDDMYYN 120

Query: 121 NAYYAKVGGISTMEMNLLEIDFLFGLGFQLNVTPNTFHTYCSYLRAEL 169
           NAYYAKVGGIST+EMN LE+DFLFGLGF LNVTPNTFHTY SYL+ E+
Sbjct: 121 NAYYAKVGGISTIEMNYLEVDFLFGLGFHLNVTPNTFHTYSSYLQREM 163

[Close]
BLAST of CmaCh04G003710 vs. NCBI nr
Match: gi|802700467|ref|XP_012083723.1| (PREDICTED: cyclin-U4-1 [Jatropha curcas])

HSP 1 Score: 257.3 bits (656), Expect = 2.0e-65
Identity = 127/168 (75.60%), Postives = 145/168 (86.31%), Query Frame = 1 

Query: 1   MADLDHRNQMAVPIPKVITFLSSLLQRVSESNDQSHELHSAAKVSAFHGLTKPTISIQTY 60
           MA+L+  N M     K+ITFLSSLLQRV+ESND + +     K+S FHGLT+PTISIQ+Y
Sbjct: 1   MAELESPNVMQ----KLITFLSSLLQRVAESNDLNSQFQPQ-KISVFHGLTRPTISIQSY 60

Query: 61  LERIFKYANCSPSCFVVAYVYLDRLVQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYN 120
           LERIFKYANCSPSCF+VAYVYLDR  QR PSLPI+SFNVHRLLITSVLV+AKF+DD+ YN
Sbjct: 61  LERIFKYANCSPSCFIVAYVYLDRFAQRQPSLPINSFNVHRLLITSVLVAAKFMDDMYYN 120

Query: 121 NAYYAKVGGISTMEMNLLEIDFLFGLGFQLNVTPNTFHTYCSYLRAEL 169
           NAYYAKVGGIST+EMN LE+DFLFGLGF LNVTPNTFHTYCSYL+ E+
Sbjct: 121 NAYYAKVGGISTIEMNYLEVDFLFGLGFHLNVTPNTFHTYCSYLQREM 163

[Close]
BLAST of CmaCh04G003710 vs. NCBI nr
Match: gi|698527061|ref|XP_009760376.1| (PREDICTED: cyclin-U4-1-like [Nicotiana sylvestris])

HSP 1 Score: 256.5 bits (654), Expect = 3.5e-65
Identity = 125/168 (74.40%), Postives = 145/168 (86.31%), Query Frame = 1 

Query: 1   MADLDHRNQMAVPIPKVITFLSSLLQRVSESNDQSHELHSAAKVSAFHGLTKPTISIQTY 60
           MA LD  +Q    IPKVI F++S+L+RV+E+ND S    SA K+S FHGLT+PTIS+++Y
Sbjct: 1   MAQLDTSDQ---EIPKVINFMASVLERVAETNDLSRRF-SAQKISMFHGLTRPTISVESY 60

Query: 61  LERIFKYANCSPSCFVVAYVYLDRLVQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYN 120
           LERIFKYANCSPSCFVVAY+YLDR  QR P LPI+SFNVHRLLITSVLVSAKF+DD+ YN
Sbjct: 61  LERIFKYANCSPSCFVVAYIYLDRFSQRQPLLPINSFNVHRLLITSVLVSAKFMDDIFYN 120

Query: 121 NAYYAKVGGISTMEMNLLEIDFLFGLGFQLNVTPNTFHTYCSYLRAEL 169
           NAYYAKVGGIST EMNLLE+DFLFG+GFQLNVTP TFHTYCSYL+ E+
Sbjct: 121 NAYYAKVGGISTKEMNLLEVDFLFGIGFQLNVTPTTFHTYCSYLQTEM 164

The following BLAST results are available for this feature:
BLAST of CmaCh04G003710 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CCU41_ARATH7.3e-6370.18Cyclin-U4-1 OS=Arabidopsis thaliana GN=CYCU4-1 PE=1 SV=1[more]
CCU42_ARATH7.0e-5867.50Cyclin-U4-2 OS=Arabidopsis thaliana GN=CYCU4-2 PE=1 SV=1[more]
CCP41_ORYSJ6.6e-5663.41Cyclin-P4-1 OS=Oryza sativa subsp. japonica GN=CYCP4-1 PE=2 SV=1[more]
CCU43_ARATH2.5e-5564.02Cyclin-U4-3 OS=Arabidopsis thaliana GN=CYCU4-3 PE=1 SV=1[more]
CCU11_ARATH4.0e-3744.30Cyclin-U1-1 OS=Arabidopsis thaliana GN=CYCU1-1 PE=1 SV=1[more]
BLAST of CmaCh04G003710 vs. TrEMBL
Match NameE-valueIdentityDescription
B9RA01_RICCO4.7e-6977.38Cyclin-dependent protein kinase, putative OS=Ricinus communis GN=RCOM_1502450 PE... [more]
A0A067JI41_JATCU4.9e-6676.79Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26314 PE=4 SV=1[more]
B9SKL0_RICCO6.4e-6675.00Cyclin-dependent protein kinase, putative OS=Ricinus communis GN=RCOM_0658420 PE... [more]
A0A067JY35_JATCU1.4e-6575.60Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14652 PE=4 SV=1[more]
B9MV61_POPTR2.4e-6575.60Cyclin family protein OS=Populus trichocarpa GN=POPTR_0014s04930g PE=4 SV=1[more]
BLAST of CmaCh04G003710 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G44740.14.1e-6470.18 cyclin p4;1[more]
AT5G07450.14.0e-5967.50 cyclin p4;3[more]
AT5G61650.11.4e-5664.02 CYCLIN P4;2[more]
AT3G21870.12.3e-3844.30 cyclin p2;1[more]
AT3G05327.19.5e-3749.06 Cyclin family protein[more]
BLAST of CmaCh04G003710 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|255539923|ref|XP_002511026.1|6.8e-6977.38PREDICTED: cyclin-U4-1 [Ricinus communis][more]
gi|802770022|ref|XP_012090519.1|7.0e-6676.79PREDICTED: cyclin-U4-1 [Jatropha curcas][more]
gi|255571045|ref|XP_002526473.1|9.2e-6675.00PREDICTED: cyclin-U4-1 [Ricinus communis][more]
gi|802700467|ref|XP_012083723.1|2.0e-6575.60PREDICTED: cyclin-U4-1 [Jatropha curcas][more]
gi|698527061|ref|XP_009760376.1|3.5e-6574.40PREDICTED: cyclin-U4-1-like [Nicotiana sylvestris][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012389Cyclin_P/U
IPR013763Cyclin-like
IPR013922Cyclin_PHO80-like
Vocabulary: Biological Process
TermDefinition
GO:0000079regulation of cyclin-dependent protein serine/threonine kinase activity
Vocabulary: Molecular Function
TermDefinition
GO:0019901protein kinase binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity
biological_process GO:0010440 stomatal lineage progression
cellular_component GO:0005575 cellular_component
molecular_function GO:0016301 kinase activity
molecular_function GO:0019901 protein kinase binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G003710.1CmaCh04G003710.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012389Cyclin P/UPIRPIRSF027110PREGcoord: 1..176
score: 2.9
IPR013763Cyclin-likeGENE3DG3DSA:1.10.472.10coord: 66..150
score: 2.
IPR013763Cyclin-likeunknownSSF47954Cyclin-likecoord: 59..151
score: 1.29
IPR013922Cyclin PHO80-likePFAMPF08613Cyclincoord: 26..150
score: 1.7
NoneNo IPR availablePANTHERPTHR15615UNCHARACTERIZEDcoord: 13..170
score: 1.0E
NoneNo IPR availablePANTHERPTHR15615:SF28CYCLIN-U4-1coord: 13..170
score: 1.0E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh04G003710Cucsa.093970Cucumber (Gy14) v1cgycmaB0203
CmaCh04G003710Csa4G025110Cucumber (Chinese Long) v2cmacuB710
CmaCh04G003710MELO3C017631Melon (DHL92) v3.5.1cmameB702
CmaCh04G003710ClCG07G017150Watermelon (Charleston Gray)cmawcgB669
CmaCh04G003710CSPI04G04260Wild cucumber (PI 183967)cmacpiB716
CmaCh04G003710CmoCh04G003910Cucurbita moschata (Rifu)cmacmoB728
CmaCh04G003710Lsi07G001330Bottle gourd (USVL1VR-Ls)cmalsiB696
CmaCh04G003710Cp4.1LG01g03450Cucurbita pepo (Zucchini)cmacpeB720
CmaCh04G003710MELO3C017631.2Melon (DHL92) v3.6.1cmamedB791
CmaCh04G003710CsaV3_4G004350Cucumber (Chinese Long) v3cmacucB0842
CmaCh04G003710Cla97C07G144170Watermelon (97103) v2cmawmbB775
CmaCh04G003710Bhi01G001991Wax gourdcmawgoB0854
CmaCh04G003710CsGy4G004180Cucumber (Gy14) v2cgybcmaB542
CmaCh04G003710Carg08045Silver-seed gourdcarcmaB0529
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh04G003710Cucumber (Chinese Long) v3cmacucB0882
CmaCh04G003710Watermelon (97103) v2cmawmbB707
CmaCh04G003710Cucurbita maxima (Rimu)cmacmaB351
CmaCh04G003710Cucurbita moschata (Rifu)cmacmoB701
CmaCh04G003710Wild cucumber (PI 183967)cmacpiB754
CmaCh04G003710Cucumber (Chinese Long) v2cmacuB745
CmaCh04G003710Watermelon (Charleston Gray)cmawcgB637
CmaCh04G003710Watermelon (97103) v1cmawmB693
CmaCh04G003710Cucurbita pepo (Zucchini)cmacpeB715
CmaCh04G003710Bottle gourd (USVL1VR-Ls)cmalsiB625
CmaCh04G003710Cucumber (Gy14) v2cgybcmaB671
CmaCh04G003710Silver-seed gourdcarcmaB1209