Cucsa.093970 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.093970
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
Descriptioncyclin p4;1
Locationscaffold00919 : 200690 .. 201541 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGAAAAAGAAGGAATGGTTGGGATTCCCAAAGTCATAAACTATCTATCCTCTGTTCTACAGAGAGTTTCAGATTCCAATGACAAAGAAAACAGGATGATTACCAAAAGGAATAATTCAGGTTTTGATGGAATATCAAGACCAAGCATTTCCATACAAAGTTATTTAGAGAGGATCTTTAAGTATGCAAACTGTAGTCCAAGTTGCTTTGTTGCTGCTTATGTTTATCTTCATCGCTTTCTTCACAATCATCATCCTTCCAATCTTCATATTGATTCCTTCAACGTTCATAGACTTCTCATTACAAGTGTTCTTGTTTCTGCCAAGTTCTTCGATGATCTGTAAGTTCTTCTTCTTCTTCTTCTTTCAATATTTCTGCCAACTTTCCTCATTATCTTCTTCTTCTTCTTTCTTTAAACCTATCATGTTCGAATGTTTATTGATTCATTCCATAAAATCCTTGAAATAGATGAATTAATTGTTTCGGGATATATATGTAATTTTCTGTTCAGGTATTACAACAATGCTTACTATGCAAAAGTTGGTGGAATAAGCACCATGGAAATGAACCATCTTGAATTGGATTTCTTATTTGGTTTGAGATTCCAATTAAATGTATCACCAAACACATTTCACATTTACTGCTCTTATCTCCAATCAGAAATGCTATCAACAACACAACCCAAACTCCAAATCCAAACACCTATAGAACAGCTCCATTCCTTCCCAGAAGATCAAGAAGCGCGCCTGACGGTTTGAGCCATCTCGGCATCTCGAAATCATTTTTGTTAAAAGGAATTGTTTTCAAATATAGGAAAATGAGTTAAAATATTTATGAAGGTAACAAAA

mRNA sequence

ATGGGAGAAAAAGAAGGAATGGTTGGGATTCCCAAAGTCATAAACTATCTATCCTCTGTTCTACAGAGAGTTTCAGATTCCAATGACAAAGAAAACAGGATGATTACCAAAAGGAATAATTCAGGTTTTGATGGAATATCAAGACCAAGCATTTCCATACAAAGTTATTTAGAGAGGATCTTTAAGTATGCAAACTGTAGTCCAAGTTGCTTTGTTGCTGCTTATGTTTATCTTCATCGCTTTCTTCACAATCATCATCCTTCCAATCTTCATATTGATTCCTTCAACGTTCATAGACTTCTCATTACAAGTGTTCTTGTTTCTGCCAAGTTCTTCGATGATCTGTATTACAACAATGCTTACTATGCAAAAGTTGGTGGAATAAGCACCATGGAAATGAACCATCTTGAATTGGATTTCTTATTTGGTTTGAGATTCCAATTAAATGTATCACCAAACACATTTCACATTTACTGCTCTTATCTCCAATCAGAAATGCTATCAACAACACAACCCAAACTCCAAATCCAAACACCTATAGAACAGCTCCATTCCTTCCCAGAAGATCAAGAAGCGCGCCTGACGGTTTGAGCCATCTCGGCATCTCGAAATCATTTTTGTTAAAAGGAAttgttttcaaatataggaaaatgagttaaaatatttatgaaggtaacaaaa

Coding sequence (CDS)

ATGGGAGAAAAAGAAGGAATGGTTGGGATTCCCAAAGTCATAAACTATCTATCCTCTGTTCTACAGAGAGTTTCAGATTCCAATGACAAAGAAAACAGGATGATTACCAAAAGGAATAATTCAGGTTTTGATGGAATATCAAGACCAAGCATTTCCATACAAAGTTATTTAGAGAGGATCTTTAAGTATGCAAACTGTAGTCCAAGTTGCTTTGTTGCTGCTTATGTTTATCTTCATCGCTTTCTTCACAATCATCATCCTTCCAATCTTCATATTGATTCCTTCAACGTTCATAGACTTCTCATTACAAGTGTTCTTGTTTCTGCCAAGTTCTTCGATGATCTGTATTACAACAATGCTTACTATGCAAAAGTTGGTGGAATAAGCACCATGGAAATGAACCATCTTGAATTGGATTTCTTATTTGGTTTGAGATTCCAATTAAATGTATCACCAAACACATTTCACATTTACTGCTCTTATCTCCAATCAGAAATGCTATCAACAACACAACCCAAACTCCAAATCCAAACACCTATAGAACAGCTCCATTCCTTCCCAGAAGATCAAGAAGCGCGCCTGACGGTTTGA

Protein sequence

MGEKEGMVGIPKVINYLSSVLQRVSDSNDKENRMITKRNNSGFDGISRPSISIQSYLERIFKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYYAKVGGISTMEMNHLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLSTTQPKLQIQTPIEQLHSFPEDQEARLTV*
Homology
[Close]
BLAST of Cucsa.093970 vs. Swiss-Prot
Match: CCU41_ARATH (Cyclin-U4-1 OS=Arabidopsis thaliana GN=CYCU4-1 PE=1 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 6.3e-57
Identity = 120/191 (62.83%), Postives = 142/191 (74.35%), Query Frame = 1 

Query: 1   MGEKEGMVGIPKVINYLSSVLQRVSDSNDKENRMITKRNN-SGFDGISRPSISIQSYLER 60
           M E E    + K+I +LSS+L+RV++SND   R+ T+    S F G+SRP+I+IQSYLER
Sbjct: 1   MAELENPSVMSKLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLER 60

Query: 61  IFKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNN 120
           IFKYANCSPSCFV AYVYL RF H   PS L I+SFNVHRLLITSV+V+AKF DDLYYNN
Sbjct: 61  IFKYANCSPSCFVVAYVYLDRFTHRQ-PS-LPINSFNVHRLLITSVMVAAKFLDDLYYNN 120

Query: 121 AYYAKVGGISTMEMNHLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLSTTQPKLQIQTP 180
           AYYAKVGGIST EMN LELDFLFGL F+LNV+PNTF+ Y SYLQ EM       L +   
Sbjct: 121 AYYAKVGGISTKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTLLQPLSLVVVPS 180

Query: 181 IEQLHSFPEDQ 191
              L +F +D+
Sbjct: 181 SRSLITFNDDE 189

[Close]
BLAST of Cucsa.093970 vs. Swiss-Prot
Match: CCP41_ORYSJ (Cyclin-P4-1 OS=Oryza sativa subsp. japonica GN=CYCP4-1 PE=2 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.9e-48
Identity = 100/186 (53.76%), Postives = 127/186 (68.28%), Query Frame = 1 

Query: 10  IPKVINYLSSVLQRVSDSNDKENRMITKRNN----SGFDGISRPSISIQSYLERIFKYAN 69
           +P+V+  LSS+LQRV++ ND               S F G+++P+ISI  YLERIF++AN
Sbjct: 10  VPRVVAILSSLLQRVAERNDAAAAAAAVGEEAAAVSAFQGLTKPAISIGGYLERIFRFAN 69

Query: 70  CSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYYAKV 129
           CSPSC+V AY+YL RFL       L +DSFNVHRLLITSVL + KF DD+ YNNAY+A+V
Sbjct: 70  CSPSCYVVAYIYLDRFLRRRPA--LAVDSFNVHRLLITSVLTAVKFVDDICYNNAYFARV 129

Query: 130 GGISTMEMNHLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLSTTQPKLQIQTPIEQLHS 189
           GGIS MEMN+LE+DFLFG+ F LNV+P  F  YC+ LQSEM    QP       + +LH 
Sbjct: 130 GGISLMEMNYLEVDFLFGIAFDLNVTPAAFASYCAVLQSEMTYLEQPP---AVDLPRLHC 189

Query: 190 FPEDQE 192
            P DQ+
Sbjct: 190 CPSDQD 190

[Close]
BLAST of Cucsa.093970 vs. Swiss-Prot
Match: CCU42_ARATH (Cyclin-U4-2 OS=Arabidopsis thaliana GN=CYCU4-2 PE=1 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.6e-47
Identity = 98/162 (60.49%), Postives = 125/162 (77.16%), Query Frame = 1 

Query: 10  IPKVINYLSSVLQRVSDSNDKENRMITKRNN-SGFDGISRPSISIQSYLERIFKYANCSP 69
           +P VI  +SS+LQRVS++ND  +R   +    S F+ +++PSISI+SY+ERIFKYA+CS 
Sbjct: 20  MPNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTKPSISIRSYMERIFKYADCSD 79

Query: 70  SCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYYAKVGGI 129
           SC++ AY+YL RF+       L IDS NVHRL+ITSVLVSAKF DDL YNNA+YAKVGGI
Sbjct: 80  SCYIVAYIYLDRFIQKQ--PLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAFYAKVGGI 139

Query: 130 STMEMNHLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLSTT 171
           +T EMN LELDFLFG+ FQLNV+ +T++ YCS LQ EM+  T
Sbjct: 140 TTEEMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREMVMRT 179

[Close]
BLAST of Cucsa.093970 vs. Swiss-Prot
Match: CCU43_ARATH (Cyclin-U4-3 OS=Arabidopsis thaliana GN=CYCU4-3 PE=1 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.0e-46
Identity = 96/157 (61.15%), Postives = 122/157 (77.71%), Query Frame = 1 

Query: 10  IPKVINYLSSVLQRVSDSNDKENRMITKRNNSGFDGISRPSISIQSYLERIFKYANCSPS 69
           +P V+  +S +LQRVS++ND  ++   K+  S F G+++PSISI+SYLERIF+YANCS S
Sbjct: 22  MPSVLTAMSYLLQRVSETNDNLSQ---KQKPSSFTGVTKPSISIRSYLERIFEYANCSYS 81

Query: 70  CFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYYAKVGGIS 129
           C++ AY+YL RF+       L I+SFNVHRL+ITSVLVSAKF DDL YNN YYAKVGGIS
Sbjct: 82  CYIVAYIYLDRFVKKQ--PFLPINSFNVHRLIITSVLVSAKFMDDLSYNNEYYAKVGGIS 141

Query: 130 TMEMNHLELDFLFGLRFQLNVSPNTFHIYCSYLQSEM 167
             EMN LELDFLFG+ F+LNV+ +TF+ YC +LQ EM
Sbjct: 142 REEMNMLELDFLFGIGFELNVTVSTFNNYCCFLQREM 173

[Close]
BLAST of Cucsa.093970 vs. Swiss-Prot
Match: CCP31_ORYSJ (Cyclin-P3-1 OS=Oryza sativa subsp. japonica GN=CYCP3-1 PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 4.3e-37
Identity = 86/182 (47.25%), Postives = 117/182 (64.29%), Query Frame = 1 

Query: 4   KEGMVGIPKVINYLSSVLQR-VSDSNDKENRMITKRNNSGFDGISRPSISIQSYLERIFK 63
           K+     PKV+  L++ L R V  + D  +    K +++ F G   P +SI+ Y ERIFK
Sbjct: 29  KKNNTEYPKVLLLLAAYLDRSVQKNEDLLDSNKIKDSSTIFHGHRAPDLSIKLYAERIFK 88

Query: 64  YANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYY 123
           Y+ CSPSCFV A +Y+ R+L   H   +++ S +VHRLLITSV+V+AKF DD ++NNA+Y
Sbjct: 89  YSECSPSCFVLALIYMERYLQQPH---VYMTSLSVHRLLITSVVVAAKFTDDAFFNNAFY 148

Query: 124 AKVGGISTMEMNHLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLSTTQPKLQIQTPIEQ 183
           A+VGGIST+EMN LELD LF L F+L V   TF  YC  L+ E +      L I  PI+Q
Sbjct: 149 ARVGGISTVEMNRLELDLLFNLDFRLKVDLETFGSYCLQLEKETM-----VLVIDRPIQQ 202

Query: 184 LH 185
           +H
Sbjct: 209 VH 202

[Close]
BLAST of Cucsa.093970 vs. TrEMBL
Match: A0A0A0KZ83_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G025110 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 9.4e-108
Identity = 195/196 (99.49%), Postives = 195/196 (99.49%), Query Frame = 1 

Query: 1   MGEKEGMVGIPKVINYLSSVLQRVSDSNDKENRMITKRNNSGFDGISRPSISIQSYLERI 60
           MGEKEGMVGIPKVINYLSSVLQRVSDSNDKENRMITKRNNSGFDGISRPSISIQSYLERI
Sbjct: 1   MGEKEGMVGIPKVINYLSSVLQRVSDSNDKENRMITKRNNSGFDGISRPSISIQSYLERI 60

Query: 61  FKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNA 120
           FKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNA
Sbjct: 61  FKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNA 120

Query: 121 YYAKVGGISTMEMNHLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLSTTQPKLQIQTPI 180
           YYAKVGGISTMEMNHLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLSTTQPKLQIQTPI
Sbjct: 121 YYAKVGGISTMEMNHLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLSTTQPKLQIQTPI 180

Query: 181 EQLHSFPEDQEARLTV 197
           EQLHSFPED EARLTV
Sbjct: 181 EQLHSFPEDPEARLTV 196

[Close]
BLAST of Cucsa.093970 vs. TrEMBL
Match: V4LH68_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10001641mg PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.6e-57
Identity = 123/191 (64.40%), Postives = 144/191 (75.39%), Query Frame = 1 

Query: 1   MGEKEGMVGIPKVINYLSSVLQRVSDSNDKENRMITKRNN-SGFDGISRPSISIQSYLER 60
           M E E    +PK+I +LSS+L+RV++SND+  R+ T+    S F G+SRP+I+IQSYLER
Sbjct: 1   MAELEKAGVMPKLIAFLSSLLERVAESNDRTRRVTTQSQRVSVFHGLSRPTITIQSYLER 60

Query: 61  IFKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNN 120
           IFKYANCSPSCFV AYVYL RF H   PS L I+SFNVHRLLITSV+VSAKF DDLYYNN
Sbjct: 61  IFKYANCSPSCFVVAYVYLDRFTHRQ-PS-LPINSFNVHRLLITSVMVSAKFLDDLYYNN 120

Query: 121 AYYAKVGGISTMEMNHLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLSTTQPKLQIQTP 180
           AYYAKVGGIST EMN LELDFLFGL F LNV+PNTFH Y SYLQ EM       L +  P
Sbjct: 121 AYYAKVGGISTKEMNLLELDFLFGLGFDLNVTPNTFHAYFSYLQKEMTLLQPLSLVVVAP 180

Query: 181 IEQLHSFPEDQ 191
              + +F +D+
Sbjct: 181 PRSVITFNDDE 189

[Close]
BLAST of Cucsa.093970 vs. TrEMBL
Match: A0A078IDY0_BRANA (BnaC04g05160D protein OS=Brassica napus GN=BnaC04g05160D PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 5.8e-57
Identity = 126/193 (65.28%), Postives = 147/193 (76.17%), Query Frame = 1 

Query: 1   MGEKEGMVGIPKVINYLSSVLQRVSDSNDKENRMITKRNN-SGFDGISRPSISIQSYLER 60
           M E E    +PK+I +LSS+L+RVS+SND   R+ T+  + S FDG+SRPSI++QSYLER
Sbjct: 1   MAELENPGVMPKLIAFLSSLLERVSESNDLTRRVATQSQSVSVFDGLSRPSITVQSYLER 60

Query: 61  IFKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNN 120
           IFKYANCSPSCFV AYVYL RF H   PS L I+SFNVHRLLITSV+VSAKF DD YYNN
Sbjct: 61  IFKYANCSPSCFVVAYVYLDRFTHRQ-PS-LPINSFNVHRLLITSVMVSAKFLDDRYYNN 120

Query: 121 AYYAKVGGISTMEMNHLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLSTTQPKLQIQTP 180
           AYYAKVGGIST EMN LELDFLFGL F LNV+PNTFH Y SYL+ EM +  QP   +  P
Sbjct: 121 AYYAKVGGISTKEMNLLELDFLFGLGFDLNVTPNTFHAYFSYLKKEM-TLLQPLSLVLVP 180

Query: 181 IEQLHSFPEDQEA 193
              + +F  D+EA
Sbjct: 181 PRSVLTF-NDEEA 189

[Close]
BLAST of Cucsa.093970 vs. TrEMBL
Match: B9RA01_RICCO (Cyclin-dependent protein kinase, putative OS=Ricinus communis GN=RCOM_1502450 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 9.9e-57
Identity = 121/190 (63.68%), Postives = 145/190 (76.32%), Query Frame = 1 

Query: 7   MVGIPKVINYLSSVLQRVSDSNDKENRMITKRNNSGFDGISRPSISIQSYLERIFKYANC 66
           +V +PKV+ +LSS+LQRV++SND  +++  +R  S F G++RPSIS+QSYLERIFKYANC
Sbjct: 8   VVVMPKVVTFLSSLLQRVAESNDLSHQLHPQRI-SVFHGLTRPSISVQSYLERIFKYANC 67

Query: 67  SPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYYAKVG 126
           SPSCFV AYVYL RF     PS   I+SFNVHRLLITSVLVSAKF DD+YYNNAYYAKVG
Sbjct: 68  SPSCFVIAYVYLDRFAQRQ-PS-FPINSFNVHRLLITSVLVSAKFMDDIYYNNAYYAKVG 127

Query: 127 GISTMEMNHLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLSTTQPKLQIQTPIEQLHS- 186
           GIST EMN LE+DFLFGL FQLNV+PNTFH YCSYLQ EML  +     ++ P+    + 
Sbjct: 128 GISTSEMNILEVDFLFGLGFQLNVTPNTFHTYCSYLQREMLVQSSQHQLVEPPLNMARAL 187

Query: 187 -----FPEDQ 191
                F ED+
Sbjct: 188 KIHCCFSEDE 194

[Close]
BLAST of Cucsa.093970 vs. TrEMBL
Match: A0A067JI41_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26314 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.3e-56
Identity = 120/180 (66.67%), Postives = 144/180 (80.00%), Query Frame = 1 

Query: 1   MGEKEGMVGIPKVINYLSSVLQRVSDSNDKENRMITKRNNSGFDGISRPSISIQSYLERI 60
           M + E    +PKVI++LSS+LQRV++SND  +++  +R  S F G++RP+ISIQ+YLERI
Sbjct: 1   MADLEASEAMPKVISFLSSLLQRVAESNDLRSQLYPQRI-SVFHGLTRPNISIQTYLERI 60

Query: 61  FKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNA 120
           FKYANCSPSCFV AYVYL RF     PS L I+SFNVHRLLITSVLVSAKF DD+YYNNA
Sbjct: 61  FKYANCSPSCFVVAYVYLDRFAQRQ-PS-LPINSFNVHRLLITSVLVSAKFMDDIYYNNA 120

Query: 121 YYAKVGGISTMEMNHLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLSTTQPKLQIQTPI 180
           YYAKVGGIST EMN LE+DFLFGL FQLNV+P TFH YCSYLQ EML  +  +L ++ P+
Sbjct: 121 YYAKVGGISTAEMNVLEVDFLFGLGFQLNVAPTTFHTYCSYLQREMLMQSPVQL-VEPPL 176

[Close]
BLAST of Cucsa.093970 vs. TAIR10
Match: AT2G44740.1 (AT2G44740.1 cyclin p4;1)

HSP 1 Score: 221.9 bits (564), Expect = 3.6e-58
Identity = 120/191 (62.83%), Postives = 142/191 (74.35%), Query Frame = 1 

Query: 1   MGEKEGMVGIPKVINYLSSVLQRVSDSNDKENRMITKRNN-SGFDGISRPSISIQSYLER 60
           M E E    + K+I +LSS+L+RV++SND   R+ T+    S F G+SRP+I+IQSYLER
Sbjct: 1   MAELENPSVMSKLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLER 60

Query: 61  IFKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNN 120
           IFKYANCSPSCFV AYVYL RF H   PS L I+SFNVHRLLITSV+V+AKF DDLYYNN
Sbjct: 61  IFKYANCSPSCFVVAYVYLDRFTHRQ-PS-LPINSFNVHRLLITSVMVAAKFLDDLYYNN 120

Query: 121 AYYAKVGGISTMEMNHLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLSTTQPKLQIQTP 180
           AYYAKVGGIST EMN LELDFLFGL F+LNV+PNTF+ Y SYLQ EM       L +   
Sbjct: 121 AYYAKVGGISTKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTLLQPLSLVVVPS 180

Query: 181 IEQLHSFPEDQ 191
              L +F +D+
Sbjct: 181 SRSLITFNDDE 189

[Close]
BLAST of Cucsa.093970 vs. TAIR10
Match: AT5G07450.1 (AT5G07450.1 cyclin p4;3)

HSP 1 Score: 190.7 bits (483), Expect = 8.8e-49
Identity = 98/162 (60.49%), Postives = 125/162 (77.16%), Query Frame = 1 

Query: 10  IPKVINYLSSVLQRVSDSNDKENRMITKRNN-SGFDGISRPSISIQSYLERIFKYANCSP 69
           +P VI  +SS+LQRVS++ND  +R   +    S F+ +++PSISI+SY+ERIFKYA+CS 
Sbjct: 20  MPNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTKPSISIRSYMERIFKYADCSD 79

Query: 70  SCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYYAKVGGI 129
           SC++ AY+YL RF+       L IDS NVHRL+ITSVLVSAKF DDL YNNA+YAKVGGI
Sbjct: 80  SCYIVAYIYLDRFIQKQ--PLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAFYAKVGGI 139

Query: 130 STMEMNHLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLSTT 171
           +T EMN LELDFLFG+ FQLNV+ +T++ YCS LQ EM+  T
Sbjct: 140 TTEEMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREMVMRT 179

[Close]
BLAST of Cucsa.093970 vs. TAIR10
Match: AT5G61650.1 (AT5G61650.1 CYCLIN P4;2)

HSP 1 Score: 188.0 bits (476), Expect = 5.7e-48
Identity = 96/157 (61.15%), Postives = 122/157 (77.71%), Query Frame = 1 

Query: 10  IPKVINYLSSVLQRVSDSNDKENRMITKRNNSGFDGISRPSISIQSYLERIFKYANCSPS 69
           +P V+  +S +LQRVS++ND  ++   K+  S F G+++PSISI+SYLERIF+YANCS S
Sbjct: 22  MPSVLTAMSYLLQRVSETNDNLSQ---KQKPSSFTGVTKPSISIRSYLERIFEYANCSYS 81

Query: 70  CFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYYAKVGGIS 129
           C++ AY+YL RF+       L I+SFNVHRL+ITSVLVSAKF DDL YNN YYAKVGGIS
Sbjct: 82  CYIVAYIYLDRFVKKQ--PFLPINSFNVHRLIITSVLVSAKFMDDLSYNNEYYAKVGGIS 141

Query: 130 TMEMNHLELDFLFGLRFQLNVSPNTFHIYCSYLQSEM 167
             EMN LELDFLFG+ F+LNV+ +TF+ YC +LQ EM
Sbjct: 142 REEMNMLELDFLFGIGFELNVTVSTFNNYCCFLQREM 173

[Close]
BLAST of Cucsa.093970 vs. TAIR10
Match: AT3G63120.1 (AT3G63120.1 cyclin p1;1)

HSP 1 Score: 152.9 bits (385), Expect = 2.0e-37
Identity = 79/173 (45.66%), Postives = 115/173 (66.47%), Query Frame = 1 

Query: 11  PKVINYLSSVLQRVSDSNDKENRMITKRNN-SGFDGISRPSISIQSYLERIFKYANCSPS 70
           P V++ LSS L+R    N  +  ++   ++ + FDG S P ISI  YL+RIFKY+ CSPS
Sbjct: 32  PTVLSRLSSSLERSLLLNHDDKILLGSPDSVTVFDGRSPPEISIAHYLDRIFKYSCCSPS 91

Query: 71  CFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYYAKVGGIS 130
           CFV A++Y+  FLH    +   +   NVHRL+IT+V+++AK FDD Y+NNAYYA+VGG++
Sbjct: 92  CFVIAHIYIDHFLHK---TRALLKPLNVHRLIITTVMLAAKVFDDRYFNNAYYARVGGVT 151

Query: 131 TMEMNHLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLSTTQPKLQIQTPIEQ 183
           T E+N LE++ LF L F+L V P TFH +C  L+ +     +   QI+ PI++
Sbjct: 152 TRELNRLEMELLFTLDFKLQVDPQTFHTHCCQLEKQ----NRDGFQIEWPIKE 197

[Close]
BLAST of Cucsa.093970 vs. TAIR10
Match: AT3G21870.1 (AT3G21870.1 cyclin p2;1)

HSP 1 Score: 146.4 bits (368), Expect = 1.9e-35
Identity = 78/186 (41.94%), Postives = 114/186 (61.29%), Query Frame = 1 

Query: 11  PKVINYLSSVLQRVSDSND---KENRMITKRNNSGFDGISRPSISIQSYLERIFKYANCS 70
           P+V+  +S V++++   N+   K+ +   K +   F G+  PSISI  YLERI+KY  CS
Sbjct: 25  PRVLTIISHVMEKLVARNEWLAKQTKGFGK-SLEAFHGVRAPSISIAKYLERIYKYTKCS 84

Query: 71  PSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYYAKVGG 130
           P+CFV  YVY+ R  H H P +L + S NVHRLL+T V+++AK  DD++YNN +YA+VGG
Sbjct: 85  PACFVVGYVYIDRLAHKH-PGSLVV-SLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGG 144

Query: 131 ISTMEMNHLELDFLFGLRFQLNVSPNTFHIYCSYLQSEM--------LSTTQPKLQIQTP 186
           +S  ++N +EL+ LF L F++ VS   F  YC +L+ EM        L   QP  +  +P
Sbjct: 145 VSNADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEMQLNDAVSSLKDIQPMQESLSP 204

[Close]
BLAST of Cucsa.093970 vs. NCBI nr
Match: gi|449458397|ref|XP_004146934.1| (PREDICTED: cyclin-U4-1-like [Cucumis sativus])

HSP 1 Score: 397.5 bits (1020), Expect = 1.3e-107
Identity = 195/196 (99.49%), Postives = 195/196 (99.49%), Query Frame = 1 

Query: 1   MGEKEGMVGIPKVINYLSSVLQRVSDSNDKENRMITKRNNSGFDGISRPSISIQSYLERI 60
           MGEKEGMVGIPKVINYLSSVLQRVSDSNDKENRMITKRNNSGFDGISRPSISIQSYLERI
Sbjct: 1   MGEKEGMVGIPKVINYLSSVLQRVSDSNDKENRMITKRNNSGFDGISRPSISIQSYLERI 60

Query: 61  FKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNA 120
           FKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNA
Sbjct: 61  FKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNA 120

Query: 121 YYAKVGGISTMEMNHLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLSTTQPKLQIQTPI 180
           YYAKVGGISTMEMNHLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLSTTQPKLQIQTPI
Sbjct: 121 YYAKVGGISTMEMNHLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLSTTQPKLQIQTPI 180

Query: 181 EQLHSFPEDQEARLTV 197
           EQLHSFPED EARLTV
Sbjct: 181 EQLHSFPEDPEARLTV 196

[Close]
BLAST of Cucsa.093970 vs. NCBI nr
Match: gi|659107765|ref|XP_008453846.1| (PREDICTED: cyclin-U4-1-like [Cucumis melo])

HSP 1 Score: 357.8 bits (917), Expect = 1.2e-95
Identity = 180/198 (90.91%), Postives = 187/198 (94.44%), Query Frame = 1 

Query: 1   MGEKEGMVGIPKVINYLSSVLQRVSDSNDKENRMI---TKRNN-SGFDGISRPSISIQSY 60
           +GEKE MVGIPKVINYLSSVLQRVS+SND+E+RM+   TKRNN SGFDGISRPSISIQSY
Sbjct: 4   VGEKEEMVGIPKVINYLSSVLQRVSESNDQEDRMMNNGTKRNNYSGFDGISRPSISIQSY 63

Query: 61  LERIFKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLY 120
           LERIFKYANCSPSCFV AYVYLHRFLHNHHPSN HIDSFNVHRLLITSVLVSAKFFDDLY
Sbjct: 64  LERIFKYANCSPSCFVVAYVYLHRFLHNHHPSNFHIDSFNVHRLLITSVLVSAKFFDDLY 123

Query: 121 YNNAYYAKVGGISTMEMNHLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLSTTQPKLQI 180
           YNNAYYAKVGGISTMEMN LELDFLFGLRFQLNVSPNTFHIYCSYLQSEML TTQPKLQI
Sbjct: 124 YNNAYYAKVGGISTMEMNLLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLLTTQPKLQI 183

Query: 181 QTPIEQLHSFPEDQEARL 195
           QTPI+QLHSF EDQ+A L
Sbjct: 184 QTPIKQLHSFTEDQDASL 201

[Close]
BLAST of Cucsa.093970 vs. NCBI nr
Match: gi|567165837|ref|XP_006397655.1| (hypothetical protein EUTSA_v10001641mg [Eutrema salsugineum])

HSP 1 Score: 229.9 bits (585), Expect = 3.7e-57
Identity = 123/191 (64.40%), Postives = 144/191 (75.39%), Query Frame = 1 

Query: 1   MGEKEGMVGIPKVINYLSSVLQRVSDSNDKENRMITKRNN-SGFDGISRPSISIQSYLER 60
           M E E    +PK+I +LSS+L+RV++SND+  R+ T+    S F G+SRP+I+IQSYLER
Sbjct: 1   MAELEKAGVMPKLIAFLSSLLERVAESNDRTRRVTTQSQRVSVFHGLSRPTITIQSYLER 60

Query: 61  IFKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNN 120
           IFKYANCSPSCFV AYVYL RF H   PS L I+SFNVHRLLITSV+VSAKF DDLYYNN
Sbjct: 61  IFKYANCSPSCFVVAYVYLDRFTHRQ-PS-LPINSFNVHRLLITSVMVSAKFLDDLYYNN 120

Query: 121 AYYAKVGGISTMEMNHLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLSTTQPKLQIQTP 180
           AYYAKVGGIST EMN LELDFLFGL F LNV+PNTFH Y SYLQ EM       L +  P
Sbjct: 121 AYYAKVGGISTKEMNLLELDFLFGLGFDLNVTPNTFHAYFSYLQKEMTLLQPLSLVVVAP 180

Query: 181 IEQLHSFPEDQ 191
              + +F +D+
Sbjct: 181 PRSVITFNDDE 189

[Close]
BLAST of Cucsa.093970 vs. NCBI nr
Match: gi|674884252|emb|CDY48257.1| (BnaC04g05160D [Brassica napus])

HSP 1 Score: 228.8 bits (582), Expect = 8.3e-57
Identity = 126/193 (65.28%), Postives = 147/193 (76.17%), Query Frame = 1 

Query: 1   MGEKEGMVGIPKVINYLSSVLQRVSDSNDKENRMITKRNN-SGFDGISRPSISIQSYLER 60
           M E E    +PK+I +LSS+L+RVS+SND   R+ T+  + S FDG+SRPSI++QSYLER
Sbjct: 1   MAELENPGVMPKLIAFLSSLLERVSESNDLTRRVATQSQSVSVFDGLSRPSITVQSYLER 60

Query: 61  IFKYANCSPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNN 120
           IFKYANCSPSCFV AYVYL RF H   PS L I+SFNVHRLLITSV+VSAKF DD YYNN
Sbjct: 61  IFKYANCSPSCFVVAYVYLDRFTHRQ-PS-LPINSFNVHRLLITSVMVSAKFLDDRYYNN 120

Query: 121 AYYAKVGGISTMEMNHLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLSTTQPKLQIQTP 180
           AYYAKVGGIST EMN LELDFLFGL F LNV+PNTFH Y SYL+ EM +  QP   +  P
Sbjct: 121 AYYAKVGGISTKEMNLLELDFLFGLGFDLNVTPNTFHAYFSYLKKEM-TLLQPLSLVLVP 180

Query: 181 IEQLHSFPEDQEA 193
              + +F  D+EA
Sbjct: 181 PRSVLTF-NDEEA 189

[Close]
BLAST of Cucsa.093970 vs. NCBI nr
Match: gi|255539923|ref|XP_002511026.1| (PREDICTED: cyclin-U4-1 [Ricinus communis])

HSP 1 Score: 228.0 bits (580), Expect = 1.4e-56
Identity = 121/190 (63.68%), Postives = 145/190 (76.32%), Query Frame = 1 

Query: 7   MVGIPKVINYLSSVLQRVSDSNDKENRMITKRNNSGFDGISRPSISIQSYLERIFKYANC 66
           +V +PKV+ +LSS+LQRV++SND  +++  +R  S F G++RPSIS+QSYLERIFKYANC
Sbjct: 8   VVVMPKVVTFLSSLLQRVAESNDLSHQLHPQRI-SVFHGLTRPSISVQSYLERIFKYANC 67

Query: 67  SPSCFVAAYVYLHRFLHNHHPSNLHIDSFNVHRLLITSVLVSAKFFDDLYYNNAYYAKVG 126
           SPSCFV AYVYL RF     PS   I+SFNVHRLLITSVLVSAKF DD+YYNNAYYAKVG
Sbjct: 68  SPSCFVIAYVYLDRFAQRQ-PS-FPINSFNVHRLLITSVLVSAKFMDDIYYNNAYYAKVG 127

Query: 127 GISTMEMNHLELDFLFGLRFQLNVSPNTFHIYCSYLQSEMLSTTQPKLQIQTPIEQLHS- 186
           GIST EMN LE+DFLFGL FQLNV+PNTFH YCSYLQ EML  +     ++ P+    + 
Sbjct: 128 GISTSEMNILEVDFLFGLGFQLNVTPNTFHTYCSYLQREMLVQSSQHQLVEPPLNMARAL 187

Query: 187 -----FPEDQ 191
                F ED+
Sbjct: 188 KIHCCFSEDE 194

The following BLAST results are available for this feature:
BLAST of Cucsa.093970 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CCU41_ARATH6.3e-5762.83Cyclin-U4-1 OS=Arabidopsis thaliana GN=CYCU4-1 PE=1 SV=1[more]
CCP41_ORYSJ1.9e-4853.76Cyclin-P4-1 OS=Oryza sativa subsp. japonica GN=CYCP4-1 PE=2 SV=1[more]
CCU42_ARATH1.6e-4760.49Cyclin-U4-2 OS=Arabidopsis thaliana GN=CYCU4-2 PE=1 SV=1[more]
CCU43_ARATH1.0e-4661.15Cyclin-U4-3 OS=Arabidopsis thaliana GN=CYCU4-3 PE=1 SV=1[more]
CCP31_ORYSJ4.3e-3747.25Cyclin-P3-1 OS=Oryza sativa subsp. japonica GN=CYCP3-1 PE=3 SV=1[more]
BLAST of Cucsa.093970 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZ83_CUCSA9.4e-10899.49Uncharacterized protein OS=Cucumis sativus GN=Csa_4G025110 PE=4 SV=1[more]
V4LH68_EUTSA2.6e-5764.40Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10001641mg PE=4 SV=1[more]
A0A078IDY0_BRANA5.8e-5765.28BnaC04g05160D protein OS=Brassica napus GN=BnaC04g05160D PE=4 SV=1[more]
B9RA01_RICCO9.9e-5763.68Cyclin-dependent protein kinase, putative OS=Ricinus communis GN=RCOM_1502450 PE... [more]
A0A067JI41_JATCU1.3e-5666.67Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26314 PE=4 SV=1[more]
BLAST of Cucsa.093970 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G44740.13.6e-5862.83 cyclin p4;1[more]
AT5G07450.18.8e-4960.49 cyclin p4;3[more]
AT5G61650.15.7e-4861.15 CYCLIN P4;2[more]
AT3G63120.12.0e-3745.66 cyclin p1;1[more]
AT3G21870.11.9e-3541.94 cyclin p2;1[more]
BLAST of Cucsa.093970 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449458397|ref|XP_004146934.1|1.3e-10799.49PREDICTED: cyclin-U4-1-like [Cucumis sativus][more]
gi|659107765|ref|XP_008453846.1|1.2e-9590.91PREDICTED: cyclin-U4-1-like [Cucumis melo][more]
gi|567165837|ref|XP_006397655.1|3.7e-5764.40hypothetical protein EUTSA_v10001641mg [Eutrema salsugineum][more]
gi|674884252|emb|CDY48257.1|8.3e-5765.28BnaC04g05160D [Brassica napus][more]
gi|255539923|ref|XP_002511026.1|1.4e-5663.68PREDICTED: cyclin-U4-1 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012389Cyclin_P/U
IPR013763Cyclin-like
IPR013922Cyclin_PHO80-like
Vocabulary: Biological Process
TermDefinition
GO:0000079regulation of cyclin-dependent protein serine/threonine kinase activity
Vocabulary: Molecular Function
TermDefinition
GO:0019901protein kinase binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity
cellular_component GO:0005575 cellular_component
molecular_function GO:0019901 protein kinase binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.093970.1Cucsa.093970.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012389Cyclin P/UPIRPIRSF027110PREGcoord: 3..194
score: 1.9
IPR013763Cyclin-likeGENE3DG3DSA:1.10.472.10coord: 62..149
score: 7.
IPR013763Cyclin-likeunknownSSF47954Cyclin-likecoord: 55..149
score: 9.08
IPR013922Cyclin PHO80-likePFAMPF08613Cyclincoord: 22..148
score: 3.0
NoneNo IPR availablePANTHERPTHR15615UNCHARACTERIZEDcoord: 10..167
score: 2.1
NoneNo IPR availablePANTHERPTHR15615:SF28CYCLIN-U4-1coord: 10..167
score: 2.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.093970Csa4G025110Cucumber (Chinese Long) v2cgycuB102
Cucsa.093970MELO3C017631Melon (DHL92) v3.5.1cgymeB111
Cucsa.093970ClCG07G017150Watermelon (Charleston Gray)cgywcgB119
Cucsa.093970CSPI04G04260Wild cucumber (PI 183967)cgycpiB103
Cucsa.093970CmaCh04G003710Cucurbita maxima (Rimu)cgycmaB0203
Cucsa.093970CmoCh04G003910Cucurbita moschata (Rifu)cgycmoB0197
Cucsa.093970Lsi07G001330Bottle gourd (USVL1VR-Ls)cgylsiB115
Cucsa.093970Cp4.1LG01g03450Cucurbita pepo (Zucchini)cgycpeB0191
Cucsa.093970MELO3C017631.2Melon (DHL92) v3.6.1cgymedB109
Cucsa.093970CsaV3_4G004350Cucumber (Chinese Long) v3cgycucB102
Cucsa.093970Cla97C07G144170Watermelon (97103) v2cgywmbB112
Cucsa.093970Bhi01G001991Wax gourdcgywgoB126
Cucsa.093970Carg08045Silver-seed gourdcarcgyB0431
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.093970Watermelon (97103) v2cgywmbB107
Cucsa.093970Cucurbita maxima (Rimu)cgycmaB0196
Cucsa.093970Cucurbita moschata (Rifu)cgycmoB0189
Cucsa.093970Cucurbita moschata (Rifu)cgycmoB0195
Cucsa.093970Wild cucumber (PI 183967)cgycpiB104
Cucsa.093970Cucumber (Chinese Long) v2cgycuB103
Cucsa.093970Watermelon (Charleston Gray)cgywcgB115
Cucsa.093970Watermelon (97103) v1cgywmB117
Cucsa.093970Cucurbita pepo (Zucchini)cgycpeB0187
Cucsa.093970Cucurbita pepo (Zucchini)cgycpeB0199
Cucsa.093970Bottle gourd (USVL1VR-Ls)cgylsiB108
Cucsa.093970Silver-seed gourdcarcgyB0793
Cucsa.093970Silver-seed gourdcarcgyB0992
Cucsa.093970Cucumber (Chinese Long) v3cgycucB106