CmoCh04G003910 (gene) Cucurbita moschata (Rifu)

NameCmoCh04G003910
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionCyclin-dependent protein kinase, putative
LocationCmo_Chr04 : 1929263 .. 1930362 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAAATACCTGAGCTGTACTTATTCTCCACCCTGTTGATAACTCAGAGGCAGCTGCAAGGCTTTTCAAAAGCTCAACAACTTGGAGCTCCATCAATGGCAGACTTAGATCACCATAATCAAATGGCCGTTCCAATTCCCAAAGTCATCACTTTCCTGTCCTCCCTTTTGCAGAGGGTGTCGGAGTCCAATGATCAAAGCCATGAGCTTCATAGCGCGGCTAAAGTTTCAGCCTTTCATGGCTTGACAAAGCCCACCATTTCCATCCAAACCTACTTGGAGAGGATATTTAAGTACGCTAATTGCAGCCCCAGCTGCTTCGTCGTGGCTTATGTTTATCTCGATCGGCTCGCTCAGCGCCACCCTTCTTTGCCCATTGATTCCTTCAATGTTCATCGCCTCCTCATTACCAGTGTTCTTGTTTCCGCCAAGTTCTTGGATGACTTGTAAGCTTTTTTTTTATTATTATTTATAATTATGATTTTTTTTTTTAATTCGTTCAATTGGGTTCTTACAATTCCTCGTCTGCTTGATTTTCGGATTGAATTCGGTCTCGGGTCTCGGGTCTCGGGTTTCGATTCTTCTTCTTCTTCTTAGTGTTCGATAGAATATTAAATTTTTATTTTATTTCTTGATATTTTTATTTTCAGGTGTTACAATAATGCCTACTATGCAAAAGTAGGTGGAATTAGCACGGTGGAGATGAACCTTCTTGAAATCGATTTCTTATTTGGTTTAGGGTTCCAACTTAACGTGACACTGAACACTTTTCACACTTACTGTTCTTATCTCCGAGCAGAAGTGTTATCGACGCAATCCAATCTTCCGATTCCCATAAAATTTTATTCCTTTCCCGAAGATGAAGCGTCGCATAAAAAACGATTGATAGCTTAAATCACATGAAATGATCGATTAGATGCGATCGTGGCAAGGCACACGGGCTCTCCCGGTTAGTCGTTAAATTAGCTAGAAGTTTTTGAGGTGGGGATGTGGACCTTTATTGGGCTTAAATGTGGGCTTTTTTTGGGCCCAAGAAGCCACCCTAATTTTTGCCTCTCTTGTAGTTGGACATTTTTGCCCTCTATGTCTATTGCGTAG

mRNA sequence

AAAAAAAAATACCTGAGCTGTACTTATTCTCCACCCTGTTGATAACTCAGAGGCAGCTGCAAGGCTTTTCAAAAGCTCAACAACTTGGAGCTCCATCAATGGCAGACTTAGATCACCATAATCAAATGGCCGTTCCAATTCCCAAAGTCATCACTTTCCTGTCCTCCCTTTTGCAGAGGGTGTCGGAGTCCAATGATCAAAGCCATGAGCTTCATAGCGCGGCTAAAGTTTCAGCCTTTCATGGCTTGACAAAGCCCACCATTTCCATCCAAACCTACTTGGAGAGGATATTTAAGTACGCTAATTGCAGCCCCAGCTGCTTCGTCGTGGCTTATGTTTATCTCGATCGGCTCGCTCAGCGCCACCCTTCTTTGCCCATTGATTCCTTCAATGTTCATCGCCTCCTCATTACCAGTGTTCTTGTTTCCGCCAAGTTCTTGGATGACTTGTGTTACAATAATGCCTACTATGCAAAAGTAGGTGGAATTAGCACGGTGGAGATGAACCTTCTTGAAATCGATTTCTTATTTGGTTTAGGGTTCCAACTTAACGTGACACTGAACACTTTTCACACTTACTGTTCTTATCTCCGAGCAGAAGTGTTATCGACGCAATCCAATCTTCCGATTCCCATAAAATTTTATTCCTTTCCCGAAGATGAAGCGTCGCATAAAAAACGATTGATAGCTTAAATCACATGAAATGATCGATTAGATGCGATCGTGGCAAGGCACACGGGCTCTCCCGGTTAGTCGTTAAATTAGCTAGAAGTTTTTGAGGTGGGGATGTGGACCTTTATTGGGCTTAAATGTGGGCTTTTTTTGGGCCCAAGAAGCCACCCTAATTTTTGCCTCTCTTGTAGTTGGACATTTTTGCCCTCTATGTCTATTGCGTAG

Coding sequence (CDS)

ATGGCAGACTTAGATCACCATAATCAAATGGCCGTTCCAATTCCCAAAGTCATCACTTTCCTGTCCTCCCTTTTGCAGAGGGTGTCGGAGTCCAATGATCAAAGCCATGAGCTTCATAGCGCGGCTAAAGTTTCAGCCTTTCATGGCTTGACAAAGCCCACCATTTCCATCCAAACCTACTTGGAGAGGATATTTAAGTACGCTAATTGCAGCCCCAGCTGCTTCGTCGTGGCTTATGTTTATCTCGATCGGCTCGCTCAGCGCCACCCTTCTTTGCCCATTGATTCCTTCAATGTTCATCGCCTCCTCATTACCAGTGTTCTTGTTTCCGCCAAGTTCTTGGATGACTTGTGTTACAATAATGCCTACTATGCAAAAGTAGGTGGAATTAGCACGGTGGAGATGAACCTTCTTGAAATCGATTTCTTATTTGGTTTAGGGTTCCAACTTAACGTGACACTGAACACTTTTCACACTTACTGTTCTTATCTCCGAGCAGAAGTGTTATCGACGCAATCCAATCTTCCGATTCCCATAAAATTTTATTCCTTTCCCGAAGATGAAGCGTCGCATAAAAAACGATTGATAGCTTAA
BLAST of CmoCh04G003910 vs. Swiss-Prot
Match: CCU41_ARATH (Cyclin-U4-1 OS=Arabidopsis thaliana GN=CYCU4-1 PE=1 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 7.0e-64
Identity = 128/199 (64.32%), Postives = 158/199 (79.40%), Query Frame = 1

Query: 1   MADLDHHNQMAVPIPKVITFLSSLLQRVSESNDQSHELHSAA-KVSAFHGLTKPTISIQT 60
           MA+L++ + M+    K+I FLSSLL+RV+ESND +  + + + +VS FHGL++PTI+IQ+
Sbjct: 1   MAELENPSVMS----KLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQS 60

Query: 61  YLERIFKYANCSPSCFVVAYVYLDRLAQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCY 120
           YLERIFKYANCSPSCFVVAYVYLDR   R PSLPI+SFNVHRLLITSV+V+AKFLDDL Y
Sbjct: 61  YLERIFKYANCSPSCFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYY 120

Query: 121 NNAYYAKVGGISTVEMNLLEIDFLFGLGFQLNVTLNTFHTYCSYLRAEVLSTQS----NL 180
           NNAYYAKVGGIST EMN LE+DFLFGLGF+LNVT NTF+ Y SYL+ E+   Q      +
Sbjct: 121 NNAYYAKVGGISTKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTLLQPLSLVVV 180

Query: 181 PIPIKFYSFPEDEASHKKR 195
           P      +F +DEASH+K+
Sbjct: 181 PSSRSLITFNDDEASHQKQ 195

BLAST of CmoCh04G003910 vs. Swiss-Prot
Match: CCU42_ARATH (Cyclin-U4-2 OS=Arabidopsis thaliana GN=CYCU4-2 PE=1 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 4.4e-58
Identity = 111/174 (63.79%), Postives = 142/174 (81.61%), Query Frame = 1

Query: 7   HNQ--MAVPIPKVITFLSSLLQRVSESNDQ-SHELHSAAKVSAFHGLTKPTISIQTYLER 66
           H+Q  MA  +P VIT +SSLLQRVSE+ND  S       ++SAF+ +TKP+ISI++Y+ER
Sbjct: 11  HDQEPMAEIMPNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTKPSISIRSYMER 70

Query: 67  IFKYANCSPSCFVVAYVYLDRLAQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYNNAY 126
           IFKYA+CS SC++VAY+YLDR  Q+ P LPIDS NVHRL+ITSVLVSAKF+DDLCYNNA+
Sbjct: 71  IFKYADCSDSCYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAF 130

Query: 127 YAKVGGISTVEMNLLEIDFLFGLGFQLNVTLNTFHTYCSYLRAEVLSTQSNLPI 178
           YAKVGGI+T EMNLLE+DFLFG+GFQLNVT++T++ YCS L+ E++      P+
Sbjct: 131 YAKVGGITTEEMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREMVMRTMYSPL 184

BLAST of CmoCh04G003910 vs. Swiss-Prot
Match: CCU43_ARATH (Cyclin-U4-3 OS=Arabidopsis thaliana GN=CYCU4-3 PE=1 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.0e-54
Identity = 104/164 (63.41%), Postives = 133/164 (81.10%), Query Frame = 1

Query: 5   DHHNQMAVPIPKVITFLSSLLQRVSESNDQSHELHSAAKVSAFHGLTKPTISIQTYLERI 64
           D    +A  +P V+T +S LLQRVSE+ND    L    K S+F G+TKP+ISI++YLERI
Sbjct: 13  DLQEPLAEIMPSVLTAMSYLLQRVSETNDN---LSQKQKPSSFTGVTKPSISIRSYLERI 72

Query: 65  FKYANCSPSCFVVAYVYLDRLAQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYNNAYY 124
           F+YANCS SC++VAY+YLDR  ++ P LPI+SFNVHRL+ITSVLVSAKF+DDL YNN YY
Sbjct: 73  FEYANCSYSCYIVAYIYLDRFVKKQPFLPINSFNVHRLIITSVLVSAKFMDDLSYNNEYY 132

Query: 125 AKVGGISTVEMNLLEIDFLFGLGFQLNVTLNTFHTYCSYLRAEV 169
           AKVGGIS  EMN+LE+DFLFG+GF+LNVT++TF+ YC +L+ E+
Sbjct: 133 AKVGGISREEMNMLELDFLFGIGFELNVTVSTFNNYCCFLQREM 173

BLAST of CmoCh04G003910 vs. Swiss-Prot
Match: CCP41_ORYSJ (Cyclin-P4-1 OS=Oryza sativa subsp. japonica GN=CYCP4-1 PE=2 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 8.6e-54
Identity = 102/164 (62.20%), Postives = 129/164 (78.66%), Query Frame = 1

Query: 9   QMAVPIPKVITFLSSLLQRVSESNDQSHEL----HSAAKVSAFHGLTKPTISIQTYLERI 68
           ++A  +P+V+  LSSLLQRV+E ND +         AA VSAF GLTKP ISI  YLERI
Sbjct: 5   EVAEAVPRVVAILSSLLQRVAERNDAAAAAAAVGEEAAAVSAFQGLTKPAISIGGYLERI 64

Query: 69  FKYANCSPSCFVVAYVYLDRLAQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYNNAYY 128
           F++ANCSPSC+VVAY+YLDR  +R P+L +DSFNVHRLLITSVL + KF+DD+CYNNAY+
Sbjct: 65  FRFANCSPSCYVVAYIYLDRFLRRRPALAVDSFNVHRLLITSVLTAVKFVDDICYNNAYF 124

Query: 129 AKVGGISTVEMNLLEIDFLFGLGFQLNVTLNTFHTYCSYLRAEV 169
           A+VGGIS +EMN LE+DFLFG+ F LNVT   F +YC+ L++E+
Sbjct: 125 ARVGGISLMEMNYLEVDFLFGIAFDLNVTPAAFASYCAVLQSEM 168

BLAST of CmoCh04G003910 vs. Swiss-Prot
Match: CCU11_ARATH (Cyclin-U1-1 OS=Arabidopsis thaliana GN=CYCU1-1 PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.5e-37
Identity = 71/156 (45.51%), Postives = 107/156 (68.59%), Query Frame = 1

Query: 15  PKVITFLSSLLQRVSESND--QSHELHSAAKVSAFHGLTKPTISIQTYLERIFKYANCSP 74
           P+V+T +S +++++   N+            + AFHG+  P+ISI  YLERI+KY  CSP
Sbjct: 25  PRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTKCSP 84

Query: 75  SCFVVAYVYLDRLAQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYNNAYYAKVGGIST 134
           +CFVV YVY+DRLA +HP   + S NVHRLL+T V+++AK LDD+ YNN +YA+VGG+S 
Sbjct: 85  ACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGGVSN 144

Query: 135 VEMNLLEIDFLFGLGFQLNVTLNTFHTYCSYLRAEV 169
            ++N +E++ LF L F++ V+   F +YC +L  E+
Sbjct: 145 ADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEM 180

BLAST of CmoCh04G003910 vs. TrEMBL
Match: B9RA01_RICCO (Cyclin-dependent protein kinase, putative OS=Ricinus communis GN=RCOM_1502450 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 5.4e-71
Identity = 141/205 (68.78%), Postives = 167/205 (81.46%), Query Frame = 1

Query: 1   MADLDHHNQMAVPIPKVITFLSSLLQRVSESNDQSHELHSAAKVSAFHGLTKPTISIQTY 60
           MADL+      V +PKV+TFLSSLLQRV+ESND SH+LH   ++S FHGLT+P+IS+Q+Y
Sbjct: 1   MADLE---ATVVVMPKVVTFLSSLLQRVAESNDLSHQLHPQ-RISVFHGLTRPSISVQSY 60

Query: 61  LERIFKYANCSPSCFVVAYVYLDRLAQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYN 120
           LERIFKYANCSPSCFV+AYVYLDR AQR PS PI+SFNVHRLLITSVLVSAKF+DD+ YN
Sbjct: 61  LERIFKYANCSPSCFVIAYVYLDRFAQRQPSFPINSFNVHRLLITSVLVSAKFMDDIYYN 120

Query: 121 NAYYAKVGGISTVEMNLLEIDFLFGLGFQLNVTLNTFHTYCSYLRAEVLSTQS------- 180
           NAYYAKVGGIST EMN+LE+DFLFGLGFQLNVT NTFHTYCSYL+ E+L   S       
Sbjct: 121 NAYYAKVGGISTSEMNILEVDFLFGLGFQLNVTPNTFHTYCSYLQREMLVQSSQHQLVEP 180

Query: 181 --NLPIPIKFY-SFPEDEASHKKRL 196
             N+   +K +  F EDE++H+K+L
Sbjct: 181 PLNMARALKIHCCFSEDESTHQKQL 201

BLAST of CmoCh04G003910 vs. TrEMBL
Match: B9SKL0_RICCO (Cyclin-dependent protein kinase, putative OS=Ricinus communis GN=RCOM_0658420 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.5e-68
Identity = 138/207 (66.67%), Postives = 166/207 (80.19%), Query Frame = 1

Query: 1   MADLDHHNQMAVPIPKVITFLSSLLQRVSESNDQSHELHSAAKVSAFHGLTKPTISIQTY 60
           MA+L+  N M    PK+ITFLSSLLQRV+ESND + ++H+  K+S FHGLT+PTISIQ Y
Sbjct: 1   MAELESPNLM----PKLITFLSSLLQRVAESNDLNLQIHTQ-KISVFHGLTRPTISIQNY 60

Query: 61  LERIFKYANCSPSCFVVAYVYLDRLAQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYN 120
           LERIFKYANCSPSCF+VAYVYLDR AQR PSLP++SFNVHRLLITSV+V+AKF+DD+ YN
Sbjct: 61  LERIFKYANCSPSCFIVAYVYLDRFAQRQPSLPLNSFNVHRLLITSVMVAAKFMDDMYYN 120

Query: 121 NAYYAKVGGISTVEMNLLEIDFLFGLGFQLNVTLNTFHTYCSYLRAEVL---------ST 180
           NAYYAKVGGIST+EMN LE+DFLFGLGF LNVT NTFHTY SYL+ E++         S+
Sbjct: 121 NAYYAKVGGISTIEMNYLEVDFLFGLGFHLNVTPNTFHTYSSYLQREMMLQPPLSLVESS 180

Query: 181 QSNLPIPIKFY-SFPEDEASHKKRLIA 198
             NL   +K +  F EDE SH+K+ +A
Sbjct: 181 SLNLGRSLKVHLCFNEDETSHQKQQLA 202

BLAST of CmoCh04G003910 vs. TrEMBL
Match: A0A067JI41_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26314 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 4.3e-68
Identity = 141/205 (68.78%), Postives = 163/205 (79.51%), Query Frame = 1

Query: 1   MADLDHHNQMAVPIPKVITFLSSLLQRVSESNDQSHELHSAAKVSAFHGLTKPTISIQTY 60
           MADL+    M    PKVI+FLSSLLQRV+ESND   +L+   ++S FHGLT+P ISIQTY
Sbjct: 1   MADLEASEAM----PKVISFLSSLLQRVAESNDLRSQLYPQ-RISVFHGLTRPNISIQTY 60

Query: 61  LERIFKYANCSPSCFVVAYVYLDRLAQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYN 120
           LERIFKYANCSPSCFVVAYVYLDR AQR PSLPI+SFNVHRLLITSVLVSAKF+DD+ YN
Sbjct: 61  LERIFKYANCSPSCFVVAYVYLDRFAQRQPSLPINSFNVHRLLITSVLVSAKFMDDIYYN 120

Query: 121 NAYYAKVGGISTVEMNLLEIDFLFGLGFQLNVTLNTFHTYCSYLRAEVLSTQS------- 180
           NAYYAKVGGIST EMN+LE+DFLFGLGFQLNV   TFHTYCSYL+ E+L           
Sbjct: 121 NAYYAKVGGISTAEMNVLEVDFLFGLGFQLNVAPTTFHTYCSYLQREMLMQSPVQLVEPP 180

Query: 181 -NLPI-PIKFY-SFPEDEASHKKRL 196
            N+ I P+K +  F +DE+SH+K+L
Sbjct: 181 LNMTIRPLKIHCCFNDDESSHQKQL 200

BLAST of CmoCh04G003910 vs. TrEMBL
Match: A0A067JY35_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14652 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 2.1e-67
Identity = 140/210 (66.67%), Postives = 162/210 (77.14%), Query Frame = 1

Query: 1   MADLDHHNQMAVPIPKVITFLSSLLQRVSESNDQSHELHSAAKVSAFHGLTKPTISIQTY 60
           MA+L+  N M     K+ITFLSSLLQRV+ESND + +     K+S FHGLT+PTISIQ+Y
Sbjct: 1   MAELESPNVMQ----KLITFLSSLLQRVAESNDLNSQFQPQ-KISVFHGLTRPTISIQSY 60

Query: 61  LERIFKYANCSPSCFVVAYVYLDRLAQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYN 120
           LERIFKYANCSPSCF+VAYVYLDR AQR PSLPI+SFNVHRLLITSVLV+AKF+DD+ YN
Sbjct: 61  LERIFKYANCSPSCFIVAYVYLDRFAQRQPSLPINSFNVHRLLITSVLVAAKFMDDMYYN 120

Query: 121 NAYYAKVGGISTVEMNLLEIDFLFGLGFQLNVTLNTFHTYCSYLRAE-VLSTQSNLPIPI 180
           NAYYAKVGGIST+EMN LE+DFLFGLGF LNVT NTFHTYCSYL+ E +L  Q   P+ I
Sbjct: 121 NAYYAKVGGISTIEMNYLEVDFLFGLGFHLNVTPNTFHTYCSYLQREMMLQPQPQPPLSI 180

Query: 181 KFYS------------FPEDEASHKKRLIA 198
              S            F EDE SH+K+ +A
Sbjct: 181 AESSLNVGRSLKLHLCFNEDETSHQKQQLA 205

BLAST of CmoCh04G003910 vs. TrEMBL
Match: B9MV61_POPTR (Cyclin family protein OS=Populus trichocarpa GN=POPTR_0014s04930g PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 3.6e-67
Identity = 138/206 (66.99%), Postives = 161/206 (78.16%), Query Frame = 1

Query: 1   MADLDHHNQMAVPIPKVITFLSSLLQRVSESNDQSHELHSAAKVSAFHGLTKPTISIQTY 60
           MA+L+    M    PK ITFLSSLLQRV++SND + E     K+S FHGLT+PTISIQ+Y
Sbjct: 1   MAELESTKMM----PKSITFLSSLLQRVADSNDLNREFQPQ-KISVFHGLTRPTISIQSY 60

Query: 61  LERIFKYANCSPSCFVVAYVYLDRLAQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYN 120
           LERIFKYANCSPSCFVVAYVYLDR AQR PSLPI+S NVHRLLITSVLVSAKF+DD+ YN
Sbjct: 61  LERIFKYANCSPSCFVVAYVYLDRFAQRQPSLPINSLNVHRLLITSVLVSAKFMDDMYYN 120

Query: 121 NAYYAKVGGISTVEMNLLEIDFLFGLGFQLNVTLNTFHTYCSYLRAEVLSTQS------- 180
           NAYYA+VGGIST+EMN LE+DFLFGLGF LNVT NTFHTYCSYL+ E++   S       
Sbjct: 121 NAYYARVGGISTIEMNYLEVDFLFGLGFNLNVTPNTFHTYCSYLQREMMQQPSLNLAESS 180

Query: 181 -NLPIPIKFY-SFPEDEASHKKRLIA 198
            NL   +K +  F EDE SH+++ +A
Sbjct: 181 LNLGRSLKVHLCFNEDETSHQQQQLA 201

BLAST of CmoCh04G003910 vs. TAIR10
Match: AT2G44740.1 (AT2G44740.1 cyclin p4;1)

HSP 1 Score: 245.0 bits (624), Expect = 3.9e-65
Identity = 128/199 (64.32%), Postives = 158/199 (79.40%), Query Frame = 1

Query: 1   MADLDHHNQMAVPIPKVITFLSSLLQRVSESNDQSHELHSAA-KVSAFHGLTKPTISIQT 60
           MA+L++ + M+    K+I FLSSLL+RV+ESND +  + + + +VS FHGL++PTI+IQ+
Sbjct: 1   MAELENPSVMS----KLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQS 60

Query: 61  YLERIFKYANCSPSCFVVAYVYLDRLAQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCY 120
           YLERIFKYANCSPSCFVVAYVYLDR   R PSLPI+SFNVHRLLITSV+V+AKFLDDL Y
Sbjct: 61  YLERIFKYANCSPSCFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYY 120

Query: 121 NNAYYAKVGGISTVEMNLLEIDFLFGLGFQLNVTLNTFHTYCSYLRAEVLSTQS----NL 180
           NNAYYAKVGGIST EMN LE+DFLFGLGF+LNVT NTF+ Y SYL+ E+   Q      +
Sbjct: 121 NNAYYAKVGGISTKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTLLQPLSLVVV 180

Query: 181 PIPIKFYSFPEDEASHKKR 195
           P      +F +DEASH+K+
Sbjct: 181 PSSRSLITFNDDEASHQKQ 195

BLAST of CmoCh04G003910 vs. TAIR10
Match: AT5G07450.1 (AT5G07450.1 cyclin p4;3)

HSP 1 Score: 225.7 bits (574), Expect = 2.5e-59
Identity = 111/174 (63.79%), Postives = 142/174 (81.61%), Query Frame = 1

Query: 7   HNQ--MAVPIPKVITFLSSLLQRVSESNDQ-SHELHSAAKVSAFHGLTKPTISIQTYLER 66
           H+Q  MA  +P VIT +SSLLQRVSE+ND  S       ++SAF+ +TKP+ISI++Y+ER
Sbjct: 11  HDQEPMAEIMPNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTKPSISIRSYMER 70

Query: 67  IFKYANCSPSCFVVAYVYLDRLAQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYNNAY 126
           IFKYA+CS SC++VAY+YLDR  Q+ P LPIDS NVHRL+ITSVLVSAKF+DDLCYNNA+
Sbjct: 71  IFKYADCSDSCYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAF 130

Query: 127 YAKVGGISTVEMNLLEIDFLFGLGFQLNVTLNTFHTYCSYLRAEVLSTQSNLPI 178
           YAKVGGI+T EMNLLE+DFLFG+GFQLNVT++T++ YCS L+ E++      P+
Sbjct: 131 YAKVGGITTEEMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREMVMRTMYSPL 184

BLAST of CmoCh04G003910 vs. TAIR10
Match: AT5G61650.1 (AT5G61650.1 CYCLIN P4;2)

HSP 1 Score: 214.5 bits (545), Expect = 5.7e-56
Identity = 104/164 (63.41%), Postives = 133/164 (81.10%), Query Frame = 1

Query: 5   DHHNQMAVPIPKVITFLSSLLQRVSESNDQSHELHSAAKVSAFHGLTKPTISIQTYLERI 64
           D    +A  +P V+T +S LLQRVSE+ND    L    K S+F G+TKP+ISI++YLERI
Sbjct: 13  DLQEPLAEIMPSVLTAMSYLLQRVSETNDN---LSQKQKPSSFTGVTKPSISIRSYLERI 72

Query: 65  FKYANCSPSCFVVAYVYLDRLAQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYNNAYY 124
           F+YANCS SC++VAY+YLDR  ++ P LPI+SFNVHRL+ITSVLVSAKF+DDL YNN YY
Sbjct: 73  FEYANCSYSCYIVAYIYLDRFVKKQPFLPINSFNVHRLIITSVLVSAKFMDDLSYNNEYY 132

Query: 125 AKVGGISTVEMNLLEIDFLFGLGFQLNVTLNTFHTYCSYLRAEV 169
           AKVGGIS  EMN+LE+DFLFG+GF+LNVT++TF+ YC +L+ E+
Sbjct: 133 AKVGGISREEMNMLELDFLFGIGFELNVTVSTFNNYCCFLQREM 173

BLAST of CmoCh04G003910 vs. TAIR10
Match: AT3G21870.1 (AT3G21870.1 cyclin p2;1)

HSP 1 Score: 157.5 bits (397), Expect = 8.3e-39
Identity = 71/156 (45.51%), Postives = 107/156 (68.59%), Query Frame = 1

Query: 15  PKVITFLSSLLQRVSESND--QSHELHSAAKVSAFHGLTKPTISIQTYLERIFKYANCSP 74
           P+V+T +S +++++   N+            + AFHG+  P+ISI  YLERI+KY  CSP
Sbjct: 25  PRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTKCSP 84

Query: 75  SCFVVAYVYLDRLAQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYNNAYYAKVGGIST 134
           +CFVV YVY+DRLA +HP   + S NVHRLL+T V+++AK LDD+ YNN +YA+VGG+S 
Sbjct: 85  ACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGGVSN 144

Query: 135 VEMNLLEIDFLFGLGFQLNVTLNTFHTYCSYLRAEV 169
            ++N +E++ LF L F++ V+   F +YC +L  E+
Sbjct: 145 ADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEM 180

BLAST of CmoCh04G003910 vs. TAIR10
Match: AT3G05327.1 (AT3G05327.1 Cyclin family protein)

HSP 1 Score: 150.2 bits (378), Expect = 1.3e-36
Identity = 79/165 (47.88%), Postives = 108/165 (65.45%), Query Frame = 1

Query: 15  PKVITFLSSLLQRVSESNDQS-HELHSAA-KVSAFHGLTKPTISIQTYLERIFKYANCSP 74
           P+VIT L+S L+++ + N +  H  H+ A +++ FHG   P++SI  Y ERI +YA CSP
Sbjct: 31  PRVITLLASTLEKMIQKNKKKFHTRHNKADEITMFHGSKAPSLSIYRYTERIHRYAQCSP 90

Query: 75  SCFVVAYVYLDRLAQRHPSLP----IDSFNVHRLLITSVLVSAKFLDDLCYNNAYYAKVG 134
            CFV A+ Y+ R  QR  +      + S NVHRLLITS+LV+AKFL+  CYNNAYYAK+G
Sbjct: 91  VCFVAAFAYILRYLQRPEATSTARRLTSLNVHRLLITSLLVAAKFLERQCYNNAYYAKIG 150

Query: 135 GISTVEMNLLEIDFLFGLGFQLNVTLNTFHTYCSYLRAEVLSTQS 174
           G+ST EMN LE  FL  + F+L +T  TF  +C  L+ E +   S
Sbjct: 151 GVSTEEMNRLERTFLVDVDFRLYITTETFEKHCLMLQKETVPCDS 195

BLAST of CmoCh04G003910 vs. NCBI nr
Match: gi|255539923|ref|XP_002511026.1| (PREDICTED: cyclin-U4-1 [Ricinus communis])

HSP 1 Score: 275.4 bits (703), Expect = 7.7e-71
Identity = 141/205 (68.78%), Postives = 167/205 (81.46%), Query Frame = 1

Query: 1   MADLDHHNQMAVPIPKVITFLSSLLQRVSESNDQSHELHSAAKVSAFHGLTKPTISIQTY 60
           MADL+      V +PKV+TFLSSLLQRV+ESND SH+LH   ++S FHGLT+P+IS+Q+Y
Sbjct: 1   MADLE---ATVVVMPKVVTFLSSLLQRVAESNDLSHQLHPQ-RISVFHGLTRPSISVQSY 60

Query: 61  LERIFKYANCSPSCFVVAYVYLDRLAQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYN 120
           LERIFKYANCSPSCFV+AYVYLDR AQR PS PI+SFNVHRLLITSVLVSAKF+DD+ YN
Sbjct: 61  LERIFKYANCSPSCFVIAYVYLDRFAQRQPSFPINSFNVHRLLITSVLVSAKFMDDIYYN 120

Query: 121 NAYYAKVGGISTVEMNLLEIDFLFGLGFQLNVTLNTFHTYCSYLRAEVLSTQS------- 180
           NAYYAKVGGIST EMN+LE+DFLFGLGFQLNVT NTFHTYCSYL+ E+L   S       
Sbjct: 121 NAYYAKVGGISTSEMNILEVDFLFGLGFQLNVTPNTFHTYCSYLQREMLVQSSQHQLVEP 180

Query: 181 --NLPIPIKFY-SFPEDEASHKKRL 196
             N+   +K +  F EDE++H+K+L
Sbjct: 181 PLNMARALKIHCCFSEDESTHQKQL 201

BLAST of CmoCh04G003910 vs. NCBI nr
Match: gi|255571045|ref|XP_002526473.1| (PREDICTED: cyclin-U4-1 [Ricinus communis])

HSP 1 Score: 266.5 bits (680), Expect = 3.6e-68
Identity = 138/207 (66.67%), Postives = 166/207 (80.19%), Query Frame = 1

Query: 1   MADLDHHNQMAVPIPKVITFLSSLLQRVSESNDQSHELHSAAKVSAFHGLTKPTISIQTY 60
           MA+L+  N M    PK+ITFLSSLLQRV+ESND + ++H+  K+S FHGLT+PTISIQ Y
Sbjct: 1   MAELESPNLM----PKLITFLSSLLQRVAESNDLNLQIHTQ-KISVFHGLTRPTISIQNY 60

Query: 61  LERIFKYANCSPSCFVVAYVYLDRLAQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYN 120
           LERIFKYANCSPSCF+VAYVYLDR AQR PSLP++SFNVHRLLITSV+V+AKF+DD+ YN
Sbjct: 61  LERIFKYANCSPSCFIVAYVYLDRFAQRQPSLPLNSFNVHRLLITSVMVAAKFMDDMYYN 120

Query: 121 NAYYAKVGGISTVEMNLLEIDFLFGLGFQLNVTLNTFHTYCSYLRAEVL---------ST 180
           NAYYAKVGGIST+EMN LE+DFLFGLGF LNVT NTFHTY SYL+ E++         S+
Sbjct: 121 NAYYAKVGGISTIEMNYLEVDFLFGLGFHLNVTPNTFHTYSSYLQREMMLQPPLSLVESS 180

Query: 181 QSNLPIPIKFY-SFPEDEASHKKRLIA 198
             NL   +K +  F EDE SH+K+ +A
Sbjct: 181 SLNLGRSLKVHLCFNEDETSHQKQQLA 202

BLAST of CmoCh04G003910 vs. NCBI nr
Match: gi|802770022|ref|XP_012090519.1| (PREDICTED: cyclin-U4-1 [Jatropha curcas])

HSP 1 Score: 265.8 bits (678), Expect = 6.1e-68
Identity = 141/205 (68.78%), Postives = 163/205 (79.51%), Query Frame = 1

Query: 1   MADLDHHNQMAVPIPKVITFLSSLLQRVSESNDQSHELHSAAKVSAFHGLTKPTISIQTY 60
           MADL+    M    PKVI+FLSSLLQRV+ESND   +L+   ++S FHGLT+P ISIQTY
Sbjct: 1   MADLEASEAM----PKVISFLSSLLQRVAESNDLRSQLYPQ-RISVFHGLTRPNISIQTY 60

Query: 61  LERIFKYANCSPSCFVVAYVYLDRLAQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYN 120
           LERIFKYANCSPSCFVVAYVYLDR AQR PSLPI+SFNVHRLLITSVLVSAKF+DD+ YN
Sbjct: 61  LERIFKYANCSPSCFVVAYVYLDRFAQRQPSLPINSFNVHRLLITSVLVSAKFMDDIYYN 120

Query: 121 NAYYAKVGGISTVEMNLLEIDFLFGLGFQLNVTLNTFHTYCSYLRAEVLSTQS------- 180
           NAYYAKVGGIST EMN+LE+DFLFGLGFQLNV   TFHTYCSYL+ E+L           
Sbjct: 121 NAYYAKVGGISTAEMNVLEVDFLFGLGFQLNVAPTTFHTYCSYLQREMLMQSPVQLVEPP 180

Query: 181 -NLPI-PIKFY-SFPEDEASHKKRL 196
            N+ I P+K +  F +DE+SH+K+L
Sbjct: 181 LNMTIRPLKIHCCFNDDESSHQKQL 200

BLAST of CmoCh04G003910 vs. NCBI nr
Match: gi|802700467|ref|XP_012083723.1| (PREDICTED: cyclin-U4-1 [Jatropha curcas])

HSP 1 Score: 263.5 bits (672), Expect = 3.0e-67
Identity = 140/210 (66.67%), Postives = 162/210 (77.14%), Query Frame = 1

Query: 1   MADLDHHNQMAVPIPKVITFLSSLLQRVSESNDQSHELHSAAKVSAFHGLTKPTISIQTY 60
           MA+L+  N M     K+ITFLSSLLQRV+ESND + +     K+S FHGLT+PTISIQ+Y
Sbjct: 1   MAELESPNVMQ----KLITFLSSLLQRVAESNDLNSQFQPQ-KISVFHGLTRPTISIQSY 60

Query: 61  LERIFKYANCSPSCFVVAYVYLDRLAQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYN 120
           LERIFKYANCSPSCF+VAYVYLDR AQR PSLPI+SFNVHRLLITSVLV+AKF+DD+ YN
Sbjct: 61  LERIFKYANCSPSCFIVAYVYLDRFAQRQPSLPINSFNVHRLLITSVLVAAKFMDDMYYN 120

Query: 121 NAYYAKVGGISTVEMNLLEIDFLFGLGFQLNVTLNTFHTYCSYLRAE-VLSTQSNLPIPI 180
           NAYYAKVGGIST+EMN LE+DFLFGLGF LNVT NTFHTYCSYL+ E +L  Q   P+ I
Sbjct: 121 NAYYAKVGGISTIEMNYLEVDFLFGLGFHLNVTPNTFHTYCSYLQREMMLQPQPQPPLSI 180

Query: 181 KFYS------------FPEDEASHKKRLIA 198
              S            F EDE SH+K+ +A
Sbjct: 181 AESSLNVGRSLKLHLCFNEDETSHQKQQLA 205

BLAST of CmoCh04G003910 vs. NCBI nr
Match: gi|566202605|ref|XP_006375171.1| (cyclin family protein [Populus trichocarpa])

HSP 1 Score: 262.7 bits (670), Expect = 5.2e-67
Identity = 138/206 (66.99%), Postives = 161/206 (78.16%), Query Frame = 1

Query: 1   MADLDHHNQMAVPIPKVITFLSSLLQRVSESNDQSHELHSAAKVSAFHGLTKPTISIQTY 60
           MA+L+    M    PK ITFLSSLLQRV++SND + E     K+S FHGLT+PTISIQ+Y
Sbjct: 1   MAELESTKMM----PKSITFLSSLLQRVADSNDLNREFQPQ-KISVFHGLTRPTISIQSY 60

Query: 61  LERIFKYANCSPSCFVVAYVYLDRLAQRHPSLPIDSFNVHRLLITSVLVSAKFLDDLCYN 120
           LERIFKYANCSPSCFVVAYVYLDR AQR PSLPI+S NVHRLLITSVLVSAKF+DD+ YN
Sbjct: 61  LERIFKYANCSPSCFVVAYVYLDRFAQRQPSLPINSLNVHRLLITSVLVSAKFMDDMYYN 120

Query: 121 NAYYAKVGGISTVEMNLLEIDFLFGLGFQLNVTLNTFHTYCSYLRAEVLSTQS------- 180
           NAYYA+VGGIST+EMN LE+DFLFGLGF LNVT NTFHTYCSYL+ E++   S       
Sbjct: 121 NAYYARVGGISTIEMNYLEVDFLFGLGFNLNVTPNTFHTYCSYLQREMMQQPSLNLAESS 180

Query: 181 -NLPIPIKFY-SFPEDEASHKKRLIA 198
            NL   +K +  F EDE SH+++ +A
Sbjct: 181 LNLGRSLKVHLCFNEDETSHQQQQLA 201

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
CCU41_ARATH7.0e-6464.32Cyclin-U4-1 OS=Arabidopsis thaliana GN=CYCU4-1 PE=1 SV=1[more]
CCU42_ARATH4.4e-5863.79Cyclin-U4-2 OS=Arabidopsis thaliana GN=CYCU4-2 PE=1 SV=1[more]
CCU43_ARATH1.0e-5463.41Cyclin-U4-3 OS=Arabidopsis thaliana GN=CYCU4-3 PE=1 SV=1[more]
CCP41_ORYSJ8.6e-5462.20Cyclin-P4-1 OS=Oryza sativa subsp. japonica GN=CYCP4-1 PE=2 SV=1[more]
CCU11_ARATH1.5e-3745.51Cyclin-U1-1 OS=Arabidopsis thaliana GN=CYCU1-1 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
B9RA01_RICCO5.4e-7168.78Cyclin-dependent protein kinase, putative OS=Ricinus communis GN=RCOM_1502450 PE... [more]
B9SKL0_RICCO2.5e-6866.67Cyclin-dependent protein kinase, putative OS=Ricinus communis GN=RCOM_0658420 PE... [more]
A0A067JI41_JATCU4.3e-6868.78Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26314 PE=4 SV=1[more]
A0A067JY35_JATCU2.1e-6766.67Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14652 PE=4 SV=1[more]
B9MV61_POPTR3.6e-6766.99Cyclin family protein OS=Populus trichocarpa GN=POPTR_0014s04930g PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G44740.13.9e-6564.32 cyclin p4;1[more]
AT5G07450.12.5e-5963.79 cyclin p4;3[more]
AT5G61650.15.7e-5663.41 CYCLIN P4;2[more]
AT3G21870.18.3e-3945.51 cyclin p2;1[more]
AT3G05327.11.3e-3647.88 Cyclin family protein[more]
Match NameE-valueIdentityDescription
gi|255539923|ref|XP_002511026.1|7.7e-7168.78PREDICTED: cyclin-U4-1 [Ricinus communis][more]
gi|255571045|ref|XP_002526473.1|3.6e-6866.67PREDICTED: cyclin-U4-1 [Ricinus communis][more]
gi|802770022|ref|XP_012090519.1|6.1e-6868.78PREDICTED: cyclin-U4-1 [Jatropha curcas][more]
gi|802700467|ref|XP_012083723.1|3.0e-6766.67PREDICTED: cyclin-U4-1 [Jatropha curcas][more]
gi|566202605|ref|XP_006375171.1|5.2e-6766.99cyclin family protein [Populus trichocarpa][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012389Cyclin_P/U
IPR013763Cyclin-like
IPR013922Cyclin_PHO80-like
Vocabulary: Biological Process
TermDefinition
GO:0000079regulation of cyclin-dependent protein serine/threonine kinase activity
Vocabulary: Molecular Function
TermDefinition
GO:0019901protein kinase binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity
biological_process GO:0010440 stomatal lineage progression
cellular_component GO:0005575 cellular_component
molecular_function GO:0016301 kinase activity
molecular_function GO:0019901 protein kinase binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G003910.1CmoCh04G003910.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012389Cyclin P/UPIRPIRSF027110PREGcoord: 1..194
score: 1.0
IPR013763Cyclin-likeGENE3DG3DSA:1.10.472.10coord: 66..150
score: 6.
IPR013763Cyclin-likeunknownSSF47954Cyclin-likecoord: 59..151
score: 3.86
IPR013922Cyclin PHO80-likePFAMPF08613Cyclincoord: 26..150
score: 6.3
NoneNo IPR availablePANTHERPTHR15615UNCHARACTERIZEDcoord: 13..184
score: 1.5E
NoneNo IPR availablePANTHERPTHR15615:SF28CYCLIN-U4-1coord: 13..184
score: 1.5E

The following gene(s) are paralogous to this gene:

None