BLAST of Lsi05G021740 vs. Swiss-Prot
Match:
HNRPR_HUMAN (Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens GN=HNRNPR PE=1 SV=1)
HSP 1 Score: 188.0 bits (476), Expect = 2.5e-46
Identity = 140/423 (33.10%), Postives = 214/423 (50.59%), Query Frame = 1
Query: 102 PPHGSEVFIGGLSRDVLEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQ 161
P G+EVF+G + RD+ E++L L E G I+++R++ D SG+++GYAFI+F KEAAQ
Sbjct: 161 PGIGTEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQ 220
Query: 162 KAIEDLHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIK 221
+A++ E++ GK + +S + +RLF+G++PK+ T + E V G+ ++ L
Sbjct: 221 EAVKLCDSYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYH 280
Query: 222 DPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQV 281
P + +NRGF F+ Y ++ A +R+++ S K+ GN TV WADP PD A+V
Sbjct: 281 QPDDKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKV 340
Query: 282 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 341
K L+V+N+ T E L++ F + G++ +V +D+AF+H+ +R +A+KA+
Sbjct: 341 KVLFVRNLATTVTEEILEKSFSEFGKLERV--------KKLKDYAFVHFEDRGAAVKAMD 400
Query: 342 ETEKYEIEGQLLEVVLAKPQSDKKSD---GAYSHISGSHPNHLLH--------------- 401
E EIEG+ +E+VLAKP K+ + + S ++ ++ H
Sbjct: 401 EMNGKEIEGEEIEIVLAKPPDKKRKERQAARQASRSTAYEDYYYHPPPRMPPPIRGRGRG 460
Query: 402 GGYGGYGGNP--------YGSLGGY---GVTAGFHQP--------MIYGRG--------- 461
GG GGYG P Y GY G+ P + GRG
Sbjct: 461 GGRGGYGYPPDYYGYEDYYDDYYGYDYHDYRGGYEDPYYGYDDGYAVRGRGGGRGGRGAP 520
Query: 462 PMPAGMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRS-GGSSSGDEV 477
P P G P P GR GY Q G P+ P R R G GGP + G S G
Sbjct: 521 PPPRGRGAPP---PRGRAGY--SQRGAPLGPPRGSR----GGRGGPAQQQRGRGSRGSRG 566
BLAST of Lsi05G021740 vs. Swiss-Prot
Match:
HNRPQ_HUMAN (Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens GN=SYNCRIP PE=1 SV=2)
HSP 1 Score: 176.4 bits (446), Expect = 7.5e-43
Identity = 124/388 (31.96%), Postives = 199/388 (51.29%), Query Frame = 1
Query: 102 PPHGSEVFIGGLSRDVLEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQ 161
P G+E+F+G + RD+ E++L L E G I+++R++ D +G ++GYAF++F TKEAAQ
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217
Query: 162 KAIEDLHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIK 221
+A++ + E++ GK I +S + +RLF+G++PKS T ++ E V G+ ++ L
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277
Query: 222 DPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQV 281
P + +NRGF F+ Y ++ A +R+++ S K+ GN TV WADP PD A+V
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337
Query: 282 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 341
K L+V+N+ T E L++ F Q G++ +V +D+AFIH+ ER A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKAFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 397
Query: 342 ETEKYEIEGQLLEVVLAKPQSDKKSDGAYSHISGSHPNHLLHGGYGGYG---------GN 401
E ++EG+ +E+V AKP K+ + + + ++ Y YG G
Sbjct: 398 EMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAAKNQ---MYDDYYYYGPPHMPPPTRGR 457
Query: 402 PYGSLGGYGVT------AGFHQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPMPP 461
G GGYG ++ Y G + D GY Q G
Sbjct: 458 GRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGGYE-------DPYYGYEDFQVGARGRG 517
Query: 462 SRSRRS---ERSNGSGGPTGRSGGSSSG 471
R R R G+ P GR+G S G
Sbjct: 518 GRGARGAAPSRGRGAAPPRGRAGYSQRG 527
BLAST of Lsi05G021740 vs. Swiss-Prot
Match:
HNRPQ_RAT (Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus GN=Syncrip PE=2 SV=1)
HSP 1 Score: 176.0 bits (445), Expect = 9.8e-43
Identity = 124/388 (31.96%), Postives = 199/388 (51.29%), Query Frame = 1
Query: 102 PPHGSEVFIGGLSRDVLEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQ 161
P G+E+F+G + RD+ E++L L E G I+++R++ D +G ++GYAF++F TKEAAQ
Sbjct: 68 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 127
Query: 162 KAIEDLHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIK 221
+A++ + E++ GK I +S + +RLF+G++PKS T ++ E V G+ ++ L
Sbjct: 128 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 187
Query: 222 DPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQV 281
P + +NRGF F+ Y ++ A +R+++ S K+ GN TV WADP PD A+V
Sbjct: 188 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 247
Query: 282 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 341
K L+V+N+ T E L++ F Q G++ +V +D+AFIH+ ER A+KA++
Sbjct: 248 KVLFVRNLANTVTEEILEKSFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 307
Query: 342 ETEKYEIEGQLLEVVLAKPQSDKKSDGAYSHISGSHPNHLLHGGYGGYG---------GN 401
E ++EG+ +E+V AKP K+ + + + ++ Y YG G
Sbjct: 308 EMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAAKNQ---MYDDYYYYGPPHMPPPTRGR 367
Query: 402 PYGSLGGYGVT------AGFHQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPMPP 461
G GGYG ++ Y G + D GY Q G
Sbjct: 368 GRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGGYE-------DPYYGYEDFQVGARGRG 427
Query: 462 SRSRRS---ERSNGSGGPTGRSGGSSSG 471
R R R G+ P GR+G S G
Sbjct: 428 GRGARGAAPSRGRGAAPPRGRAGYSQRG 437
BLAST of Lsi05G021740 vs. Swiss-Prot
Match:
HNRPQ_MOUSE (Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus GN=Syncrip PE=1 SV=2)
HSP 1 Score: 176.0 bits (445), Expect = 9.8e-43
Identity = 124/388 (31.96%), Postives = 199/388 (51.29%), Query Frame = 1
Query: 102 PPHGSEVFIGGLSRDVLEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQ 161
P G+E+F+G + RD+ E++L L E G I+++R++ D +G ++GYAF++F TKEAAQ
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217
Query: 162 KAIEDLHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIK 221
+A++ + E++ GK I +S + +RLF+G++PKS T ++ E V G+ ++ L
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277
Query: 222 DPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQV 281
P + +NRGF F+ Y ++ A +R+++ S K+ GN TV WADP PD A+V
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337
Query: 282 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 341
K L+V+N+ T E L++ F Q G++ +V +D+AFIH+ ER A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKSFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 397
Query: 342 ETEKYEIEGQLLEVVLAKPQSDKKSDGAYSHISGSHPNHLLHGGYGGYG---------GN 401
E ++EG+ +E+V AKP K+ + + + ++ Y YG G
Sbjct: 398 EMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAAKNQ---MYDDYYYYGPPHMPPPTRGR 457
Query: 402 PYGSLGGYGVT------AGFHQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPMPP 461
G GGYG ++ Y G + D GY Q G
Sbjct: 458 GRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGGYE-------DPYYGYEDFQVGARGRG 517
Query: 462 SRSRRS---ERSNGSGGPTGRSGGSSSG 471
R R R G+ P GR+G S G
Sbjct: 518 GRGARGAAPSRGRGAAPPRGRAGYSQRG 527
BLAST of Lsi05G021740 vs. Swiss-Prot
Match:
RBM46_DANRE (Probable RNA-binding protein 46 OS=Danio rerio GN=rbm46 PE=2 SV=1)
HSP 1 Score: 163.7 bits (413), Expect = 5.0e-39
Identity = 104/288 (36.11%), Postives = 158/288 (54.86%), Query Frame = 1
Query: 102 PPHGSEVFIGGLSRDVLEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQ 161
PP G EVF+G + RD+ E++L + E G I+E R++ + SGE++GYAF+ + T+E AQ
Sbjct: 41 PPRGREVFVGKIPRDMYEDELVPVFEQAGHIYEFRLMMEF-SGENRGYAFVMYTTREKAQ 100
Query: 162 KAIEDLHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIK 221
+AI+ L E++ GK I +S RLFIG++PK +E +E + V GV ++ +
Sbjct: 101 RAIQLLDNYEIRPGKFIGVCVSLDNCRLFIGSIPKDKKKEEIQEEMMKVTEGVMDVIVYP 160
Query: 222 DPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQV 281
+ +NRGFAFV Y ++ A +R+K+ F+L G++ V WA+P+ D +V
Sbjct: 161 SAVDRMKNRGFAFVEYESHKAAAMARRKLIPGTFQLWGHTIQVDWAEPEKELDEETMQRV 220
Query: 282 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKR--DFAFIHYAERSSALKA 341
+ LYV+N+ +TT E L+ F Q + PG K+ D+AFIH+ R AL A
Sbjct: 221 RVLYVRNLMLSTTEETLRSEFSQ--------LKPGSVERVKKLTDYAFIHFYNREDALTA 280
Query: 342 VKETEKYEIEGQLLEVVLAKPQSDKKSDGAYSHISGSHPNHLLHGGYG 387
++ I+G +EV LAKP S K H GGYG
Sbjct: 281 LESMNGKVIDGSPIEVTLAKPAS--KDGNKRFGPRNCHNGVTAAGGYG 317
BLAST of Lsi05G021740 vs. TrEMBL
Match:
D7U819_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02700 PE=4 SV=1)
HSP 1 Score: 684.9 bits (1766), Expect = 7.2e-194
Identity = 358/483 (74.12%), Postives = 409/483 (84.68%), Query Frame = 1
Query: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVSEEPQVGTNT 60
MA+G+EVE+RVDL++DNYMEEMDDDVEE + EDGV+ EN VEE E+ + G +
Sbjct: 1 MAEGTEVEDRVDLDDDNYMEEMDDDVEEQI-EDGVEGGGDEN----VEEEYEDSKAGGSG 60
Query: 61 EDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
ED+ + I+ E +++ E + +DED+ EKHAQLLALPPHGSE+FIGGL R+ LEE
Sbjct: 61 EDQLLEVDESRIANEPLKDEENPTASVDEDEKEKHAQLLALPPHGSEIFIGGLPREALEE 120
Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
DLRDLCE +GE E+R++K+RDSGESKGYAFISFKTKE AQKAIE+LH KE KG+TIRCS
Sbjct: 121 DLRDLCEPIGEALEVRLMKNRDSGESKGYAFISFKTKEIAQKAIEELHSKEFKGRTIRCS 180
Query: 181 LSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
LS+SKHRLFIGNVPKSWTDDEF+++IE +GPG ENIELIKDPQNPSRNRGFAFV YYNNA
Sbjct: 181 LSESKHRLFIGNVPKSWTDDEFRKVIEDIGPGAENIELIKDPQNPSRNRGFAFVEYYNNA 240
Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL 300
CADY RQKMSS+NFKLDGN+PTVSWADPKS D+SAAAQVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYGRQKMSSSNFKLDGNTPTVSWADPKSTSDHSAAAQVKALYVKNIPENTTTEQLKEL 300
Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
FQ+HGEVTKV MPP K+G SKRDF FIH+AERSSALKAVK+TEK+EI+GQ L+V LAKPQ
Sbjct: 301 FQRHGEVTKVVMPPAKSGQSKRDFGFIHFAERSSALKAVKDTEKHEIDGQALDVSLAKPQ 360
Query: 361 SDKKSDGAYSHISGSHPNHLLHGGYGGYGGNPYGSLG-GYGVTAGFHQPMIYGRGPMPAG 420
SDKK +G + + SG HPN L H GYGG+GGNPYGSLG GYGV+A F QP+IYGRGPMPAG
Sbjct: 361 SDKKFEGVHPYSSG-HPNFLPHPGYGGFGGNPYGSLGPGYGVSAPFQQPVIYGRGPMPAG 420
Query: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRSGGSSSGDEVNRGRRY 480
M MVPMVLPDGRIGYVLQQPGV MPP R RR+ERSNGS G GR G S SGD+ NR RRY
Sbjct: 421 MHMVPMVLPDGRIGYVLQQPGVQMPPPRPRRNERSNGSSGQQGRGGSSGSGDD-NRSRRY 476
Query: 481 RPY 483
RPY
Sbjct: 481 RPY 476
BLAST of Lsi05G021740 vs. TrEMBL
Match:
M5XJC0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004918mg PE=4 SV=1)
HSP 1 Score: 679.9 bits (1753), Expect = 2.3e-192
Identity = 352/487 (72.28%), Postives = 411/487 (84.39%), Query Frame = 1
Query: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAG---ENPEEDVEEVSEEPQVG 60
MA+G+EVEERVDL+EDNYMEEMDDDVEE +DEDGVD G EN EE+ EE E+P
Sbjct: 1 MAEGAEVEERVDLDEDNYMEEMDDDVEEQIDEDGVDGVDGGSDENVEENAEEAHEDPTTK 60
Query: 61 TNTEDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDV 120
+ +D+ ++ + E +++ EK ++ ++E++ EKHAQLLALPP+GSEVFIGGL +D
Sbjct: 61 ASEKDQSPEPDESHNAGEFVDDEEKPSASVNEEEKEKHAQLLALPPYGSEVFIGGLPKDT 120
Query: 121 LEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTI 180
LEEDLRDLC+ +GEI EIR+++DR++GESKGYAFI FKTKE AQKAIE+LH K KGKT+
Sbjct: 121 LEEDLRDLCDEIGEIIEIRLMQDRETGESKGYAFIGFKTKEVAQKAIEELHNKAFKGKTL 180
Query: 181 RCSLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYY 240
RCSLS++KHRLFIGNVPK WT+DEF+++IE VGPGVE+IELIKDPQNPSRNRGFAFVLYY
Sbjct: 181 RCSLSETKHRLFIGNVPKIWTEDEFRKVIEEVGPGVEHIELIKDPQNPSRNRGFAFVLYY 240
Query: 241 NNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQL 300
NNACADYSRQKMS++NF+LDGNSPTV+WADPKS D+SAAAQVKALYVKNIPENT+TE+L
Sbjct: 241 NNACADYSRQKMSNSNFRLDGNSPTVTWADPKSTSDHSAAAQVKALYVKNIPENTSTEKL 300
Query: 301 KELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLA 360
KELFQ+HGEVTKV MPPGK G KRDF F+H+AERSSALKAVK+TEKYEI+GQ LEVVLA
Sbjct: 301 KELFQRHGEVTKVVMPPGKGGQGKRDFGFVHFAERSSALKAVKDTEKYEIDGQPLEVVLA 360
Query: 361 KPQSDKKSDGAYSHISGSHPNHLLHGGYGG-YGGNPYGSLGG-YGVTAGFHQPMIYGRGP 420
KPQ++KKSDGAY + +G H NHL H GYGG + GNPYGS+GG Y V AGF QPMIYGRGP
Sbjct: 361 KPQTEKKSDGAYPYNAGPHANHLSHPGYGGGFAGNPYGSVGGGYSVPAGFQQPMIYGRGP 420
Query: 421 MPAGMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRSGGSSSGDEVNR 480
MPAGM MVPMVLPDGRIGYVLQQPG +P R RR +RSNG G GR GG S DE NR
Sbjct: 421 MPAGMHMVPMVLPDGRIGYVLQQPGAQIPTPRPRRVDRSNGPSGQPGRGGGGS--DESNR 480
Query: 481 GRRYRPY 483
GRRYRPY
Sbjct: 481 GRRYRPY 485
BLAST of Lsi05G021740 vs. TrEMBL
Match:
I1JS33_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_03G260500 PE=4 SV=1)
HSP 1 Score: 677.2 bits (1746), Expect = 1.5e-191
Identity = 344/485 (70.93%), Postives = 414/485 (85.36%), Query Frame = 1
Query: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVS-EEPQVGTN 60
M++G+E++ERVDL+E+NYMEEMDDDVEE +D+DGVD EN E VEE E+
Sbjct: 1 MSEGAEIDERVDLDEENYMEEMDDDVEEQIDDDGVDGGEDENAEGSVEEHEYEDSAAEAG 60
Query: 61 TEDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLE 120
+D+ +++I+ E ++ +K S +DED+ EKH +LLALPPHGSEVFIGGL RDV E
Sbjct: 61 GKDQLPEAEKSDIATEFGDDEQK-LSFIDEDEKEKHDELLALPPHGSEVFIGGLPRDVCE 120
Query: 121 EDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIRC 180
+DLR+LCE +G+I E+R++KDRD+GE KGYAF++FKTKE AQKAIE++H KE KGKT+RC
Sbjct: 121 DDLRELCEPMGDILEVRLMKDRDTGEHKGYAFVAFKTKEVAQKAIEEIHSKEFKGKTLRC 180
Query: 181 SLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNN 240
SLS++KHRLFIGNVPK+WT+D+F++++EGVGPGVE IELIKDPQNPSRNRGFAFVLYYNN
Sbjct: 181 SLSETKHRLFIGNVPKTWTEDDFRKVVEGVGPGVETIELIKDPQNPSRNRGFAFVLYYNN 240
Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKE 300
ACADYSRQKM+S++FKLDGN+PTV+WADPK+ PD+SA++QVKALYVKNIPEN TTEQLKE
Sbjct: 241 ACADYSRQKMASSSFKLDGNTPTVTWADPKNSPDHSASSQVKALYVKNIPENVTTEQLKE 300
Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
LF++HGEVTKV MPPGKAG KRDF FIHYAERSSALKAVK+TEKYEI+GQ+LEVVLAKP
Sbjct: 301 LFRRHGEVTKVVMPPGKAG-GKRDFGFIHYAERSSALKAVKDTEKYEIDGQMLEVVLAKP 360
Query: 361 QSDKKSDGAYSHISGSHPNHLLHGGYGGYGGNPYGSLG-GYGVTAGFHQPMIYGRGPMPA 420
Q+DKK DG Y++ G HPNH+ H YG + GNPYGSLG GYGV AG+ QPMIYGRGPMPA
Sbjct: 361 QADKKPDGGYAYNPGLHPNHVPHPAYGNFSGNPYGSLGAGYGVAAGYQQPMIYGRGPMPA 420
Query: 421 GMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRSGGSSSG-DEVNRGR 480
GMQMVPM+LPDGRIGYVLQQPGV +PP+R RR++RSNG G GR GG +SG DE NR R
Sbjct: 421 GMQMVPMMLPDGRIGYVLQQPGVQVPPARPRRNDRSNGPSGQPGRGGGGASGNDEGNRSR 480
Query: 481 RYRPY 483
RYRPY
Sbjct: 481 RYRPY 483
BLAST of Lsi05G021740 vs. TrEMBL
Match:
V7AZJ8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G257300g PE=4 SV=1)
HSP 1 Score: 673.3 bits (1736), Expect = 2.2e-190
Identity = 349/491 (71.08%), Postives = 408/491 (83.10%), Query Frame = 1
Query: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVSE--EPQVGT 60
M++G+E++ERVDL+E+N+MEEMDDDVEE +D+DGVD EN E VEE E +
Sbjct: 1 MSEGAEIDERVDLDEENFMEEMDDDVEEQIDDDGVDGGEDENAEGSVEEHDEYEDSTAEV 60
Query: 61 NTEDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVL 120
+D +++I+ E ++ +K S +DED+ EKH +LLALPPHGSEVFIGGL RDV
Sbjct: 61 GGKDHLPEAEKSDIATEFGDDDQKP-SFIDEDEKEKHDELLALPPHGSEVFIGGLPRDVC 120
Query: 121 EEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIR 180
E+DLRDLCE +G+I E+R++KDRD+GE+KGYAF++FKTKE AQKAIE++H +E KGKT+R
Sbjct: 121 EDDLRDLCEPVGDILEVRLMKDRDTGENKGYAFVAFKTKEVAQKAIEEIHSREFKGKTLR 180
Query: 181 CSLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYN 240
CSLS++KHRLFIGNVPK+WT+D+F+++IEGVGPGVENIELIKDPQNPSRNRGFAFVLYYN
Sbjct: 181 CSLSETKHRLFIGNVPKTWTEDDFRKVIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYN 240
Query: 241 NACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLK 300
NACADYSRQKMSSA+FKLDGN+PTV+WADPK+ PD+SA++QVKALYVKNIPEN TT+QLK
Sbjct: 241 NACADYSRQKMSSASFKLDGNTPTVTWADPKNSPDHSASSQVKALYVKNIPENVTTDQLK 300
Query: 301 ELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAK 360
ELF++HGEVTKV MPPGKAG KRDF FIHYAERSSALKAVKETEKYEI+GQLLEVVLAK
Sbjct: 301 ELFRRHGEVTKVVMPPGKAG-GKRDFGFIHYAERSSALKAVKETEKYEIDGQLLEVVLAK 360
Query: 361 PQSDKKSDGAYSHISGSHPNHLLHGGYGGYGGNPYGSLG-GYGVTAGFHQPMIYGRGPMP 420
PQ+DKK DG Y + G H NHL H YG + GNPYGSLG GYGV G+ QPMIYGRGPMP
Sbjct: 361 PQADKKPDGGYGYNPGLHSNHLPHPAYGNFSGNPYGSLGAGYGVGGGYQQPMIYGRGPMP 420
Query: 421 AGMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRSGGSSSG------D 480
AGMQMVPMVLPDGRIGYVLQQPGV PPSR RR ERSNG G GR GG G D
Sbjct: 421 AGMQMVPMVLPDGRIGYVLQQPGVQAPPSRPRRIERSNGPSGQPGRGGGGGGGGGGSGND 480
Query: 481 EVNRGRRYRPY 483
E NR RRYRPY
Sbjct: 481 EGNRSRRYRPY 489
BLAST of Lsi05G021740 vs. TrEMBL
Match:
I1NCQ2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G259200 PE=4 SV=1)
HSP 1 Score: 672.2 bits (1733), Expect = 4.8e-190
Identity = 343/485 (70.72%), Postives = 411/485 (84.74%), Query Frame = 1
Query: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVS-EEPQVGTN 60
M++G+E++ERVDL+E+NYMEEMDDDVEE +D+DGVD EN E EE E+
Sbjct: 1 MSEGAEIDERVDLDEENYMEEMDDDVEEQIDDDGVDGVEEENAEGSFEEDEYEDSAAEAG 60
Query: 61 TEDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLE 120
+D+ +++I+ E ++ +K S +DED+ EKH +LLALPPHGSEVFIGGL RDV E
Sbjct: 61 GKDQLPEAEKSDIATEFGDDEQK-LSFIDEDEKEKHDELLALPPHGSEVFIGGLPRDVCE 120
Query: 121 EDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIRC 180
+DLR+LCE +G+I E+R++KDRD+GE+KGYAF++FKTKE AQKAIE++H KE KGKT+RC
Sbjct: 121 DDLRELCEPMGDILEVRLMKDRDTGENKGYAFVAFKTKEVAQKAIEEIHSKEFKGKTLRC 180
Query: 181 SLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNN 240
SLS++KHRLFIGNVPK+WT+D+F++++EGVGPGVE IELIKDPQNPSRNRGFAFVLYYNN
Sbjct: 181 SLSETKHRLFIGNVPKTWTEDDFRKVVEGVGPGVETIELIKDPQNPSRNRGFAFVLYYNN 240
Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKE 300
ACADYSRQKM+S++FKLDGN+PTV+WADPK+ PD+SA++QVKALYVKNIPEN TTEQLKE
Sbjct: 241 ACADYSRQKMASSSFKLDGNTPTVTWADPKNSPDHSASSQVKALYVKNIPENVTTEQLKE 300
Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
LF++HGEVTKV MPPGKAG KRDF FIHYAERSSALKAVK+TEKYEI+GQ+LEVVLAKP
Sbjct: 301 LFRRHGEVTKVVMPPGKAG-GKRDFGFIHYAERSSALKAVKDTEKYEIDGQMLEVVLAKP 360
Query: 361 QSDKKSDGAYSHISGSHPNHLLHGGYGGYGGNPYGSLG-GYGVTAGFHQPMIYGRGPMPA 420
Q+DKK DG Y++ G HPNH+ H YG + GNPYGSLG GYGV AG+ QPMIYGRGPMPA
Sbjct: 361 QADKKPDGGYAYNPGLHPNHIPHPAYGNFSGNPYGSLGAGYGVAAGYQQPMIYGRGPMPA 420
Query: 421 GMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRSGGSSSG-DEVNRGR 480
GMQMVPMVLPDGRIGYVLQQPGV +P +R RR +RSNG G GR GG SG DE NR R
Sbjct: 421 GMQMVPMVLPDGRIGYVLQQPGVQVPATRPRRIDRSNGPSGQPGRGGGGGSGNDEGNRSR 480
Query: 481 RYRPY 483
RYRPY
Sbjct: 481 RYRPY 483
BLAST of Lsi05G021740 vs. TAIR10
Match:
AT4G00830.1 (AT4G00830.1 RNA-binding (RRM/RBD/RNP motifs) family protein)
HSP 1 Score: 578.6 bits (1490), Expect = 3.7e-165
Identity = 313/499 (62.73%), Postives = 393/499 (78.76%), Query Frame = 1
Query: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDV-EEVSEEPQV--- 60
M+D + ++RVD EE +Y EM+D+VEE E+ + ++ ++DV + +EE +V
Sbjct: 1 MSDARDNDDRVDFEEGSY-SEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDY 60
Query: 61 ----GTNTED---KFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVF 120
G + ED + + D N+I IE+ ++ EK S +D++D EK++ LL+LPPHGSEVF
Sbjct: 61 GDTKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVF 120
Query: 121 IGGLSRDVLEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHG 180
IGGL RDV EEDLRDLCE +GEIFE+R++KDRDSG+SKGYAF++FKTK+ AQKAIE+LH
Sbjct: 121 IGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHS 180
Query: 181 KEVKGKTIRCSLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNR 240
KE KGKTIRCSLS++K+RLFIGN+PK+WT+DEF+++IE VGPGVENIELIKDP N +RNR
Sbjct: 181 KEFKGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNR 240
Query: 241 GFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNS-AAAQVKALYVKNI 300
GFAFVLYYNNACADYSRQKM +NFKL+GN+PTV+WADPKS P++S AAAQVKALYVKNI
Sbjct: 241 GFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNI 300
Query: 301 PENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIE 360
PENT+TEQLKELFQ+HGEVTK+ PPGK G KRDF F+HYAERSSALKAVK+TE+YE+
Sbjct: 301 PENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVN 360
Query: 361 GQLLEVVLAKPQSDKKSD-GAYSHISGSHPNHLLHGGYGGYGGNPYGSLG-GYGVTAGFH 420
GQ LEVVLAKPQ+++K D +YS+ + P +H +GG+ PYG++G G G+ F
Sbjct: 361 GQPLEVVLAKPQAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFS 420
Query: 421 QPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPM---PPSRSRRSERSNGSGGPTGR 480
QPMIYGRG MP GMQMVPM+LPDGR+GYVLQQPG+PM PP R RR++R+NGS G +GR
Sbjct: 421 QPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSGR 480
Query: 481 SGGSSSGDEVNRGRRYRPY 483
S D GRRYRPY
Sbjct: 481 D-NSHEHDGNRGGRRYRPY 495
BLAST of Lsi05G021740 vs. TAIR10
Match:
AT3G52660.1 (AT3G52660.1 RNA-binding (RRM/RBD/RNP motifs) family protein)
HSP 1 Score: 398.3 bits (1022), Expect = 6.8e-111
Identity = 217/485 (44.74%), Postives = 323/485 (66.60%), Query Frame = 1
Query: 3 DGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVSEEPQVGTNTED 62
D E EERVDL+ DN EE+ +EE V+ + V+ EE++EE+ EE +
Sbjct: 13 DSMESEERVDLDGDNDPEEI---LEEEVEYEEVE-------EEEIEEIEEEIE------- 72
Query: 63 KFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEEDL 122
+ +E E E + + +E++ ++H +LLALPPHGSEV++GG+ D E DL
Sbjct: 73 -------EEVEVEEEEEEEDAVATEEEEEKKRHVELLALPPHGSEVYLGGIPTDATEGDL 132
Query: 123 RDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIRCSLS 182
+ C S+GE+ E+RI++++DSG+ KGYAF++F++K+ A +AI+ L+ + +GK I+CS +
Sbjct: 133 KGFCGSIGEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTLNNTDFRGKRIKCSTT 192
Query: 183 DSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNACA 242
+KHRLF+GNVP++W + + K+ +GPGV+ +EL K+PQN RNRGFAF+ YYN+ACA
Sbjct: 193 QAKHRLFLGNVPRNWMESDIKKAANRIGPGVQIVELPKEPQNMGRNRGFAFIEYYNHACA 252
Query: 243 DYSRQKMSSANFKLDGNSPTVSWADPKS-MPDNSAAAQVKALYVKNIPENTTTEQLKELF 302
+YS+QKMS+ +FKLD N+PTVSWA+ +S +S+A+QVKALY+KN+P + T E+LK LF
Sbjct: 253 EYSKQKMSNPSFKLDDNAPTVSWAESRSGGGGDSSASQVKALYIKNLPRDITQERLKALF 312
Query: 303 QQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQS 362
+ HG++ KV +PP K G + F+HYAER+S ++A+K TE+YEI+G +L+ LAKPQ+
Sbjct: 313 EHHGKILKVVIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEIDGHMLDCTLAKPQA 372
Query: 363 DKKSD-GAYSHISGS--HPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPA 422
D+K++ ++ S PN+ Y G +P+G+LGG+G +A + QP+++ G
Sbjct: 373 DQKTNTNTVQNVQKSQLQPNYPPLLSY-GMAPSPFGALGGFGASA-YSQPLMHAGGHAAG 432
Query: 423 GMQMVPMVLPDGRIGYVLQQPGV-PMPPSRSRRSERSNGSGGPTGRSGGSSSGDEVNRGR 482
GM M+P++LPDGRIGYVLQQPG+ MP R S G G + SG S D
Sbjct: 433 GMSMMPIMLPDGRIGYVLQQPGLAAMPQPPPRHSPPYRGGSGSSSSSGSKRSSDNGRGRS 471
BLAST of Lsi05G021740 vs. TAIR10
Match:
AT2G44710.1 (AT2G44710.1 RNA-binding (RRM/RBD/RNP motifs) family protein)
HSP 1 Score: 127.1 bits (318), Expect = 2.9e-29
Identity = 95/362 (26.24%), Postives = 185/362 (51.10%), Query Frame = 1
Query: 8 EERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVSEE-------------- 67
+ER+DL+++ E + + EE+ E+ +R G+ E V E EE
Sbjct: 108 DERLDLDDN----EPEYEAEEYGGEEFEERELGQEDHELVNEEGEELEEEIEVEEEAGEF 167
Query: 68 -PQVGTNTEDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGS-EVFIG 127
++G ED S D ++ +IE +++ E +D ++ E H L E+F+G
Sbjct: 168 ADEIGDGAEDLDSEDDDDDHAIEEVKHGET----VDVEEEEHHDVLHERRKRKEFEIFVG 227
Query: 128 GLSRDVLEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKE 187
L + EEDL+ + +GE+ E+RI+K+ + +SKG AF+ F T E A++A+++L
Sbjct: 228 SLDKGASEEDLKKVFGHVGEVTEVRILKNPQTKKSKGSAFLRFATVEQAKRAVKELKSPM 287
Query: 188 VKGKTIRCSLSDSKHRLFIGNVPKSWTDDEFKELIEGVG-PGVENIELIKDPQNPSRNRG 247
+ GK + S LF+GN+ K WT + +E ++ G +++I L++D N + NRG
Sbjct: 288 INGKKCGVTASQDNDTLFVGNICKIWTPEALREKLKHYGVENMDDITLVEDSNNVNMNRG 347
Query: 248 FAFVLYYNNACADYSRQKMSSANFKLDGNSPT-VSWADPKSMPDNSAAAQVKALYVKNIP 307
+AF+ + + + A + +++ + P VS+ D ++ AQVK +++ +
Sbjct: 348 YAFLEFSSRSDAMDAHKRLVKKDVMFGVEKPAKVSFTDSFLDLEDEIMAQVKTIFIDGLL 407
Query: 308 ENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEI-E 351
+ E++++L + +G++ KV + + ++DF F+ + +A+ K E+ E
Sbjct: 408 PSWNEERVRDLLKPYGKLEKVELARNMPSARRKDFGFVTFDTHEAAVSCAKFINNSELGE 461
BLAST of Lsi05G021740 vs. TAIR10
Match:
AT5G28390.1 (AT5G28390.1 RNA-binding (RRM/RBD/RNP motifs) family protein)
HSP 1 Score: 113.2 bits (282), Expect = 4.4e-25
Identity = 53/101 (52.48%), Postives = 78/101 (77.23%), Query Frame = 1
Query: 249 MSSANFKLDGNSPTVSWADPKSMPD-NSAAAQVKALYVKNIPENTTTEQLKELFQQHGEV 308
MS+ +FKLD N+PTVSWA+ +S + +S+A+QVKALY+KN+P + T E+LK LF+ HG++
Sbjct: 1 MSNPSFKLDDNAPTVSWAESRSGGEGDSSASQVKALYIKNLPRDITQERLKALFEHHGKI 60
Query: 309 TKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIE 349
KV +PP K G + F+HYAER+S ++A+K TE+YEI+
Sbjct: 61 LKVVIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEID 101
BLAST of Lsi05G021740 vs. TAIR10
Match:
AT4G34110.1 (AT4G34110.1 poly(A) binding protein 2)
HSP 1 Score: 92.0 bits (227), Expect = 1.0e-18
Identity = 82/283 (28.98%), Postives = 134/283 (47.35%), Query Frame = 1
Query: 108 VFIGGLSRDVLEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDL 167
+FI L + + L D S G I ++ D SG+SKGY F+ + +E+AQKAIE L
Sbjct: 126 IFIKNLDESIDHKALHDTFSSFGNIVSCKVAVD-SSGQSKGYGFVQYANEESAQKAIEKL 185
Query: 168 HG-----KEV-KGKTIRCSLSDSK------HRLFIGNVPKSWTDDEFKELIEGVGPGVEN 227
+G K+V G +R DS +++ N+ +S TDD+ K G + +
Sbjct: 186 NGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGK-ITS 245
Query: 228 IELIKDPQNPSRNRGFAFVLYYNNACADYSRQKMSSAN-FKLDGNSPTVSWADPKS---- 287
++KD + +++GF FV + N AD + + + S N K D V A KS
Sbjct: 246 AVVMKDGE--GKSKGFGFVNFEN---ADDAARAVESLNGHKFDDKEWYVGRAQKKSERET 305
Query: 288 ---------MPDNSAAAQVKALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSK 347
+ + + Q LYVKN+ + + E+LKE+F G VT + G+SK
Sbjct: 306 ELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSK 365
Query: 348 RDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQSDKK 365
F+ +A A +A+ + IE + L V +A+ + D++
Sbjct: 366 GS-GFVAFATPEEATEAMSQLSGKMIESKPLYVAIAQRKEDRR 400
BLAST of Lsi05G021740 vs. NCBI nr
Match:
gi|659074851|ref|XP_008437831.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X2 [Cucumis melo])
HSP 1 Score: 909.1 bits (2348), Expect = 3.4e-261
Identity = 462/482 (95.85%), Postives = 476/482 (98.76%), Query Frame = 1
Query: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVSEEPQVGTNT 60
MAD SEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGE PEEDVEEVSEEPQVGT+T
Sbjct: 1 MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
Query: 61 EDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
EDKFSGDGRNN+S+ESIENREKSASLLDED+LEKHAQLLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61 EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
DLR++CESLGEIFEIRIIKD+DSGESKGYAFI+FKTKEAAQKAIEDLHGKEVKGKTIRCS
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
Query: 181 LSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
LSDSKHRLFIGNVPKSWTDDEF+ LIEGVGPGVENIELIKDPQNP+RNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA 240
Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL 300
CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDN+AAAQVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKEL 300
Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
Query: 361 SDKKSDGAYSHISGSHPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGM 420
SDKKSDGAYSHISGS+PNHLLHGGYGGYGGNPYGS+GGYGVTAGFHQPMIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSIGGYGVTAGFHQPMIYGRGPMPAGM 420
Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRSGGSSSGDEVNRGRRYR 480
QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGG GRSGGSSS D+VNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYR 480
Query: 481 PY 483
PY
Sbjct: 481 PY 482
BLAST of Lsi05G021740 vs. NCBI nr
Match:
gi|449431998|ref|XP_004133787.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X2 [Cucumis sativus])
HSP 1 Score: 905.6 bits (2339), Expect = 3.7e-260
Identity = 464/482 (96.27%), Postives = 475/482 (98.55%), Query Frame = 1
Query: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVSEEPQVGTNT 60
MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGE PEEDVEEVSEEPQVGT+T
Sbjct: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
Query: 61 EDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
EDKFS D RNN+S+ESIENREKS+SLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61 EDKFSDD-RNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
DLRD+CESLGEIFEIRIIKD+DSGESKGYAFI+FKTKEAAQKAIEDLHGKEVKGKTIRCS
Sbjct: 121 DLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
Query: 181 LSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
LSDSKHRLFIGNVPKSWTDDEF+ LIEGVGPGVENIELIKDPQNP+RNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA 240
Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL 300
CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL 300
Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
Query: 361 SDKKSDGAYSHISGSHPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGM 420
SDKKSDGAYSHISGS+PNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGM 420
Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRSGGSSSGDEVNRGRRYR 480
QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGG GRSGGSSS D+VNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYR 480
Query: 481 PY 483
PY
Sbjct: 481 PY 481
BLAST of Lsi05G021740 vs. NCBI nr
Match:
gi|659074847|ref|XP_008437829.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X1 [Cucumis melo])
HSP 1 Score: 904.4 bits (2336), Expect = 8.3e-260
Identity = 462/483 (95.65%), Postives = 476/483 (98.55%), Query Frame = 1
Query: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVSEEPQVGTNT 60
MAD SEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGE PEEDVEEVSEEPQVGT+T
Sbjct: 1 MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
Query: 61 EDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
EDKFSGDGRNN+S+ESIENREKSASLLDED+LEKHAQLLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61 EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVK-GKTIRC 180
DLR++CESLGEIFEIRIIKD+DSGESKGYAFI+FKTKEAAQKAIEDLHGKEVK GKTIRC
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180
Query: 181 SLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNN 240
SLSDSKHRLFIGNVPKSWTDDEF+ LIEGVGPGVENIELIKDPQNP+RNRGFAFVLYYNN
Sbjct: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240
Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKE 300
ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDN+AAAQVKALYVKNIPENTTTEQLKE
Sbjct: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE 300
Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP
Sbjct: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
Query: 361 QSDKKSDGAYSHISGSHPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAG 420
QSDKKSDGAYSHISGS+PNHLLHGGYGGYGGNPYGS+GGYGVTAGFHQPMIYGRGPMPAG
Sbjct: 361 QSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSIGGYGVTAGFHQPMIYGRGPMPAG 420
Query: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRSGGSSSGDEVNRGRRY 480
MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGG GRSGGSSS D+VNRGRRY
Sbjct: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRY 480
Query: 481 RPY 483
RPY
Sbjct: 481 RPY 483
BLAST of Lsi05G021740 vs. NCBI nr
Match:
gi|778676745|ref|XP_011650655.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X1 [Cucumis sativus])
HSP 1 Score: 901.0 bits (2327), Expect = 9.2e-259
Identity = 464/483 (96.07%), Postives = 475/483 (98.34%), Query Frame = 1
Query: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVSEEPQVGTNT 60
MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGE PEEDVEEVSEEPQVGT+T
Sbjct: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
Query: 61 EDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
EDKFS D RNN+S+ESIENREKS+SLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61 EDKFSDD-RNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVK-GKTIRC 180
DLRD+CESLGEIFEIRIIKD+DSGESKGYAFI+FKTKEAAQKAIEDLHGKEVK GKTIRC
Sbjct: 121 DLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180
Query: 181 SLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNN 240
SLSDSKHRLFIGNVPKSWTDDEF+ LIEGVGPGVENIELIKDPQNP+RNRGFAFVLYYNN
Sbjct: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240
Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKE 300
ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKE
Sbjct: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKE 300
Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP
Sbjct: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
Query: 361 QSDKKSDGAYSHISGSHPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAG 420
QSDKKSDGAYSHISGS+PNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAG
Sbjct: 361 QSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAG 420
Query: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRSGGSSSGDEVNRGRRY 480
MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGG GRSGGSSS D+VNRGRRY
Sbjct: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRY 480
Query: 481 RPY 483
RPY
Sbjct: 481 RPY 482
BLAST of Lsi05G021740 vs. NCBI nr
Match:
gi|225453602|ref|XP_002264834.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein R [Vitis vinifera])
HSP 1 Score: 684.9 bits (1766), Expect = 1.0e-193
Identity = 358/483 (74.12%), Postives = 409/483 (84.68%), Query Frame = 1
Query: 1 MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVSEEPQVGTNT 60
MA+G+EVE+RVDL++DNYMEEMDDDVEE + EDGV+ EN VEE E+ + G +
Sbjct: 1 MAEGTEVEDRVDLDDDNYMEEMDDDVEEQI-EDGVEGGGDEN----VEEEYEDSKAGGSG 60
Query: 61 EDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
ED+ + I+ E +++ E + +DED+ EKHAQLLALPPHGSE+FIGGL R+ LEE
Sbjct: 61 EDQLLEVDESRIANEPLKDEENPTASVDEDEKEKHAQLLALPPHGSEIFIGGLPREALEE 120
Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
DLRDLCE +GE E+R++K+RDSGESKGYAFISFKTKE AQKAIE+LH KE KG+TIRCS
Sbjct: 121 DLRDLCEPIGEALEVRLMKNRDSGESKGYAFISFKTKEIAQKAIEELHSKEFKGRTIRCS 180
Query: 181 LSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
LS+SKHRLFIGNVPKSWTDDEF+++IE +GPG ENIELIKDPQNPSRNRGFAFV YYNNA
Sbjct: 181 LSESKHRLFIGNVPKSWTDDEFRKVIEDIGPGAENIELIKDPQNPSRNRGFAFVEYYNNA 240
Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL 300
CADY RQKMSS+NFKLDGN+PTVSWADPKS D+SAAAQVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYGRQKMSSSNFKLDGNTPTVSWADPKSTSDHSAAAQVKALYVKNIPENTTTEQLKEL 300
Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
FQ+HGEVTKV MPP K+G SKRDF FIH+AERSSALKAVK+TEK+EI+GQ L+V LAKPQ
Sbjct: 301 FQRHGEVTKVVMPPAKSGQSKRDFGFIHFAERSSALKAVKDTEKHEIDGQALDVSLAKPQ 360
Query: 361 SDKKSDGAYSHISGSHPNHLLHGGYGGYGGNPYGSLG-GYGVTAGFHQPMIYGRGPMPAG 420
SDKK +G + + SG HPN L H GYGG+GGNPYGSLG GYGV+A F QP+IYGRGPMPAG
Sbjct: 361 SDKKFEGVHPYSSG-HPNFLPHPGYGGFGGNPYGSLGPGYGVSAPFQQPVIYGRGPMPAG 420
Query: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRSGGSSSGDEVNRGRRY 480
M MVPMVLPDGRIGYVLQQPGV MPP R RR+ERSNGS G GR G S SGD+ NR RRY
Sbjct: 421 MHMVPMVLPDGRIGYVLQQPGVQMPPPRPRRNERSNGSSGQQGRGGSSGSGDD-NRSRRY 476
Query: 481 RPY 483
RPY
Sbjct: 481 RPY 476
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
HNRPR_HUMAN | 2.5e-46 | 33.10 | Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens GN=HNRNPR PE=1 SV=1 | [more] |
HNRPQ_HUMAN | 7.5e-43 | 31.96 | Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens GN=SYNCRIP PE=1 SV=2 | [more] |
HNRPQ_RAT | 9.8e-43 | 31.96 | Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus GN=Syncrip PE=2 S... | [more] |
HNRPQ_MOUSE | 9.8e-43 | 31.96 | Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus GN=Syncrip PE=1 SV=2 | [more] |
RBM46_DANRE | 5.0e-39 | 36.11 | Probable RNA-binding protein 46 OS=Danio rerio GN=rbm46 PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
D7U819_VITVI | 7.2e-194 | 74.12 | Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02700 PE=4 SV=... | [more] |
M5XJC0_PRUPE | 2.3e-192 | 72.28 | Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004918mg PE=4 SV=1 | [more] |
I1JS33_SOYBN | 1.5e-191 | 70.93 | Uncharacterized protein OS=Glycine max GN=GLYMA_03G260500 PE=4 SV=1 | [more] |
V7AZJ8_PHAVU | 2.2e-190 | 71.08 | Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G257300g PE=4 SV=1 | [more] |
I1NCQ2_SOYBN | 4.8e-190 | 70.72 | Uncharacterized protein OS=Glycine max GN=GLYMA_19G259200 PE=4 SV=1 | [more] |