Lsi05G021740 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi05G021740
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionRNA-binding protein 47
Locationchr05 : 28408307 .. 28413245 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTAGCTTTCAGTTTAGCCCATCCGGCTTGAAGCCCTCGTCGTTTCAGCCCAGAGAGGCTTCGTCTTCTGCACACAAAAGGCCCGAATCGAAAGAACTCATTCTAAGATATTTAACGCAGCTCTGATTCTCCCCTTTTCTCTGAGGTTTGCAAGGGAAAAAAGGAAACCGACCCAGATACAGAAAACAGGATTCGCTTACAACCATACCCAGATTCCAATTCTTCTACCCCCTCAATTCTCCACTTCACTGGTATGGCCTTCCAAGACTCTCACTGTGATTTATTCGCCTTTTTTTCCCATTTCATTATCTGGGGTCTTCACTTTTCAGTCCCTTAAGGCGTCCAGATGTGCTATTGATCGAATTGCTTATAGTGATGTGTTCTTTTCCGGTTCTTGGTTTCTTTAGCTGCTTCCCAATGTGCATGTTGGCGAGATTTATCCTGCTTATTTGTGTTTAGGTCTCATACCACTCCCATTTAGGTGTGTGTTTTTCAATAGGGTAATGGATTTTTGCAATCTCCATTCCTTTCTCTCTTTGTCTGTTGCTATTTGATTCTGGGACTCGTTTATTGGAAAACTGAGGTGTTTCCTTTTCTTTCTATTCCGATTGTCCGATTTGCATATTGGGGGCCATGTTGTATTGATTTTGTGTCTTGGGATTGGATATCTTTGAAACGAAGCACACTGGTTGACGGAACATGAGTTAGGCTTATGTGTCGATGGATTTTATTTTGTAATTCTGCGGGCAGACATCATATAACCTCAGCCCTTTTGTTTTAATTTTTAGTATTTCATCATCTTAGAGCAAGTTTGTGGAATTTACTTTAAAAATTCTTAAATCTTCTGATTCTTATCGATAAAAACTAAATTGGACTCCTAATAATGTTGCTTCTAGGTATCTTCAATGAACTGAAGTGGGCATGTTTTCATTCTGATTATTGTATTCTTTTTCATTTTCCTTTTACTAGTTACTGATACCTTCATACTCATATTTATAACTTACATGCATTTACTATATTACAGGTGATTTTGTGCTTATCAAATTTGTTTGTTGAATGACACTATCTGCGACGTAAAACAGTCATGGCAGATGGTTCAGAAGTCGAGGAGCGGGTGGATCTTGAAGAGGACAATTACATGGAAGAGATGGATGATGACGTAGAAGAACATGTAGATGAGGATGGAGTAGATAGGAGAGCTGGTGAAAATCCGGAAGAGGATGTTGAAGAAGTAAGTGAAGAACCTCAAGTTGGGACCAACACAGAAGATAAATTTTCAGGAGATGGTAGAAATAACATATCCATAGAGTCTATAGAAAATAGAGAAAAGTCTGCTTCTTTATTAGATGAAGATGATCTAGAGAAGCATGCTCAGCTTCTTGCCCTTCCTCCTCATGGATCTGAAGTTTTTATTGGTGGACTTTCACGTGATGTTTTAGAAGAAGATTTGAGAGATTTGTGTGAATCACTAGGAGAAATATTTGAGGTCTGCAATGTTGTTTATTCTCTATTGTGCTTTTTCTTTCTTTGGGGCTTTTATTTTAGAGGTACGTTCTGTAATACAATTGTTTTGCAGATAAGGATAATAAAAGACAGAGATTCTGGTGAAAGCAAAGGTTATGCTTTTATATCGTTTAAAACCAAAGAGGCAGCACAAAAGGCTATAGAGGATTTGCATGGTAAAGAAGTCAAGGTAGTTGTGGGACTCCTTAAGACTTCAATGTCCTTTTTACTTTATTATGTTTCGATAGCATCAAAGCTGCTCTTTTTCAGATATCCATCATCGATAAATTTAAAATTGATTTTAGTTCATCCTTCACACTACAGGGTAAAACGATAAGGTGTTCTCTGTCTGATTCTAAACACAGACTATTTATTGGTAATGTCCCAAAAAGTTGGACGGACGATGAGTTTAAGGAACTTATAGAAGGAGTTGGCCCTGGAGTTGAAAACATTGAGCTTATTAAGGTGGAGTTGCAAATTTATATATCTTTATCTCTAGAAATTGATAGTTATTGAGGCTTTATTGTTCTTTCTTCTGTATAACCTATTGCAGGATCCTCAGAACCCAAGTCGAAATCGTGGATTTGCATTTGTTCTGTATTATAACAATGCTTGTGCTGATTATTCAAGGCAGAAAATGTCTAGTGCAAATTTTAAGCTGGATGGAAATTCCCCAACTGTTAGTTGGGCTGATCCAAAAAGTATGCCCGATAACTCTGCTGCTGCTCAGGTAATCAAGTTATCATCACTGGAGAAAATTGTATGGGATCTGCATGGCATTTTTCAAGTACCTTGAAATTTCATATCAACTGGAATTTGGTTGAAAAATGTGGTACTAAGGTTAAAAGAGTAAACTGAAATGTTGTGCTGATTTGTTTCTTCAATTTCAATTACTAAACAAGGCAACCAGATATTAGATATCCGAGCCACAAAATTATATTGATTGACCAACTGAACATTGAGCAAGGAAATGTGAGTAGAAAGATGGTCATCTTTGAGCCAAGTTCCTAATTGCCCAAGTTCCTCTTTGAGCCAAGCTCAATACGAAACCCACCTGACAGAGTAGTTTGCTGCACCCCACTAATCCTCTAGTTGGCCACTGACAAACTTCATCAAATTCTAACTATCATTTTTAACGAACCATTGGTCTACCATTATGCTATAGTTAAATGAAGTAAAGAAAGGAAAGCTTAAACATAAAGCTTTTGGTTCTCCTTTGTTCAACCTTCTCACTGAAGCATGCCCTTTCTCCCCCCCAACAACTTATAGGAATATATGAATAAGACTAAACTGAAGATGAAATACTAATATAAGTTATGTGTTCTGGTACATTCTTTCATTTTTCTCAATGAAAGTTCAGATTTTTGTAATAATAATAATAATAATAACAACAACTAACTAACTACTAGGTAACAAGATTTAGTGCATGAATGACAGATATTAATAACTAACTACTAGGTAACAACATTTAGTGCCATCGCCCTTGGTGGACATAAATTGATCGCCATCAATTCTCATTATGACTGTGTATTGAGATTTACTTGAAAGAATTGAATTACAATTTGAAATACAATTTAGTTTCCAAATTTACAGGAAGATATTTAAAAGCACATCGTAGTTTGTGTACTACATTGTCATTGGTGAAGTCTATGAAGACTTGTTTTGTTTCGGCATTGACTGCCTGATTTCTTATTTGTTTGTGTTAGTAAGTTATAATAGGTCTACAACATTATGAATTGCAGGTGAAGGCTCTTTATGTGAAAAACATACCTGAGAATACTACTACTGAGCAATTGAAAGAACTGTTTCAGCAGCATGGGGAAGTGACAAAAGTGAACATGCCACCTGGCAAAGCTGGGAGTAGTAAACGAGATTTTGCATTCATCCATTATGCTGAGAGGTCAAGTGCATTGAAGGCTGTTAAAGAGACAGAGAAATATGAAATTGAAGGTTTTGTTTTTATATCTCATTTGAAATCTCAAATGCACACTCATATTCCCTGTTTTTACCAAAAAAAAAAAACGTTATACAGATTTTGGCTTTTATTTCTGTTGGTTGATGCGTGCTTGCATAGTCGATTTAGGCTGCAGACTGCCCAGTGAGCTGCTCTTTCTTTGACAGCTCGTAGCATGTTTTATCTCTATTTACTGAAATGGACGATCTGTTCAACTTATGTATGGAATTTCATCTATTACATATCCTCAACATTTAAAAATAAAGTAGGACGAATCAGCAGTAGTCAAGTTGTCTAAACAGATCTGTTGTATTTGACAATGTTCTGTAAAGAAAAAAAAAATGATGCTAAAAGGGATCCAGAAATGCTTTGTTTGAACTTTTTTTCTTTCAACCCAAAGTATAATCTTCAGAGATTTTAATCTGCAGGCCAACTTTTGGAGGTTGTCCTTGCAAAGCCTCAAAGTGATAAAAAATCAGACGGGGCTTATTCCCATATATCTGGAAGTCATCCCAACCATCTTCTTCATGGTGGATACGGTGGTTATGGCGGAAATCCATATGGTTCCCTAGGTGGGTATGGTGTTACTGCTGGATTCCATCAGGTACATTTTTCTTCTTTCTCACCTTTAAGGCTTAAAAAAATTATATGGAGGTCAAAATCCTTTGCAGCATCTCAGTTAGGTGTACCTCCCAAAGGGAAAAGAAAAGAGATGAAAGAAGATTTTTTTTTTCCCTCCATATTAATCTCATGGATTTTCTTCCATGAACAGCCAATGATTTATGGTAGGGGGCCAATGCCAGCCGGAATGCAGATGGTACCAATGGTTTTACCAGATGGTCGAATTGGTTATGTTCTGTAAGATATCACTCTTACTTGACTTGAAGTCCATTTTTTATATAATTATATAAGATGGTAAATTGTATATATTGTCACTTGTGAATGCAGTCAGCAACCTGGAGTACCAATGCCACCTTCTCGATCTCGAAGAAGTGAGAGGAGCAATGGGTCAGGTGGACCAACGGGTCGTTCGGGAGGTAGTAGCAGTGGTGATGAAGTCAACCGCGGCAGAAGGTATCGACCCTATTAATGGTAAAGAACTGAAGACAATGGTGTCATTAGGCTAAATCACAGGAAATAACAAAATTCCCACTCAGAAAAAGAATGTAAAAGAAACTGAACAACATAAGAGAGAGCTGAGAGGTTTTGAATGACTGAGAAAAGATTGAATTGAGATCCCTTTTCAGGATAAATTGGAGAATGATTTGCTTTTGTGGCAATTCTTATTAGCTTAGAGTTAAACAAAGAAATTATGTGTACCAAAGCAATGCAGTTAAAAAGTTCTGCTCAAATTTTAAATCTTCTGTTCTCTCTCCCATTCTTCTTGGTGTTCTTTTTAAGGTGGAAGTCATGTGTAATCACTGGTAAAGGATAGCTTTATTTTTGTTCATCTGTCTTTTGCTAATCAGATGCTTTCTGCTC

mRNA sequence

TTTAGCTTTCAGTTTAGCCCATCCGGCTTGAAGCCCTCGTCGTTTCAGCCCAGAGAGGCTTCGTCTTCTGCACACAAAAGGCCCGAATCGAAAGAACTCATTCTAAGATATTTAACGCAGCTCTGATTCTCCCCTTTTCTCTGAGGTTTGCAAGGGAAAAAAGGAAACCGACCCAGATACAGAAAACAGGATTCGCTTACAACCATACCCAGATTCCAATTCTTCTACCCCCTCAATTCTCCACTTCACTGGTATGGCCTTCCAAGACTCTCACTGTGATTTATTCGCCTTTTTTTCCCATTTCATTATCTGGGGTCTTCACTTTTCAGTCCCTTAAGGCGTCCAGATGTGCTATTGATCGAATTGCTTATAGTGATGTGTTCTTTTCCGGTTCTTGGTTTCTTTAGCTGCTTCCCAATGTGCATGTTGGCGAGATTTATCCTGCTTATTTGTGTTTAGGTCTCATACCACTCCCATTTAGGTGATTTTGTGCTTATCAAATTTGTTTGTTGAATGACACTATCTGCGACGTAAAACAGTCATGGCAGATGGTTCAGAAGTCGAGGAGCGGGTGGATCTTGAAGAGGACAATTACATGGAAGAGATGGATGATGACGTAGAAGAACATGTAGATGAGGATGGAGTAGATAGGAGAGCTGGTGAAAATCCGGAAGAGGATGTTGAAGAAGTAAGTGAAGAACCTCAAGTTGGGACCAACACAGAAGATAAATTTTCAGGAGATGGTAGAAATAACATATCCATAGAGTCTATAGAAAATAGAGAAAAGTCTGCTTCTTTATTAGATGAAGATGATCTAGAGAAGCATGCTCAGCTTCTTGCCCTTCCTCCTCATGGATCTGAAGTTTTTATTGGTGGACTTTCACGTGATGTTTTAGAAGAAGATTTGAGAGATTTGTGTGAATCACTAGGAGAAATATTTGAGATAAGGATAATAAAAGACAGAGATTCTGGTGAAAGCAAAGGTTATGCTTTTATATCGTTTAAAACCAAAGAGGCAGCACAAAAGGCTATAGAGGATTTGCATGGTAAAGAAGTCAAGGGTAAAACGATAAGGTGTTCTCTGTCTGATTCTAAACACAGACTATTTATTGGTAATGTCCCAAAAAGTTGGACGGACGATGAGTTTAAGGAACTTATAGAAGGAGTTGGCCCTGGAGTTGAAAACATTGAGCTTATTAAGGATCCTCAGAACCCAAGTCGAAATCGTGGATTTGCATTTGTTCTGTATTATAACAATGCTTGTGCTGATTATTCAAGGCAGAAAATGTCTAGTGCAAATTTTAAGCTGGATGGAAATTCCCCAACTGTTAGTTGGGCTGATCCAAAAAGTATGCCCGATAACTCTGCTGCTGCTCAGGTGAAGGCTCTTTATGTGAAAAACATACCTGAGAATACTACTACTGAGCAATTGAAAGAACTGTTTCAGCAGCATGGGGAAGTGACAAAAGTGAACATGCCACCTGGCAAAGCTGGGAGTAGTAAACGAGATTTTGCATTCATCCATTATGCTGAGAGGTCAAGTGCATTGAAGGCTGTTAAAGAGACAGAGAAATATGAAATTGAAGGCCAACTTTTGGAGGTTGTCCTTGCAAAGCCTCAAAGTGATAAAAAATCAGACGGGGCTTATTCCCATATATCTGGAAGTCATCCCAACCATCTTCTTCATGGTGGATACGGTGGTTATGGCGGAAATCCATATGGTTCCCTAGGTGGGTATGGTGTTACTGCTGGATTCCATCAGCCAATGATTTATGGTAGGGGGCCAATGCCAGCCGGAATGCAGATGGTACCAATGGTTTTACCAGATGGTCGAATTGGTTATGTTCTTCAGCAACCTGGAGTACCAATGCCACCTTCTCGATCTCGAAGAAGTGAGAGGAGCAATGGGTCAGGTGGACCAACGGGTCGTTCGGGAGGTAGTAGCAGTGGTGATGAAGTCAACCGCGGCAGAAGGTATCGACCCTATTAATGGTAAAGAACTGAAGACAATGGTGTCATTAGGCTAAATCACAGGAAATAACAAAATTCCCACTCAGAAAAAGAATGTAAAAGAAACTGAACAACATAAGAGAGAGCTGAGAGGTTTTGAATGACTGAGAAAAGATTGAATTGAGATCCCTTTTCAGGATAAATTGGAGAATGATTTGCTTTTGTGGCAATTCTTATTAGCTTAGAGTTAAACAAAGAAATTATGTGTACCAAAGCAATGCAGTTAAAAAGTTCTGCTCAAATTTTAAATCTTCTGTTCTCTCTCCCATTCTTCTTGGTGTTCTTTTTAAGGTGGAAGTCATGTGTAATCACTGGTAAAGGATAGCTTTATTTTTGTTCATCTGTCTTTTGCTAATCAGATGCTTTCTGCTC

Coding sequence (CDS)

ATGGCAGATGGTTCAGAAGTCGAGGAGCGGGTGGATCTTGAAGAGGACAATTACATGGAAGAGATGGATGATGACGTAGAAGAACATGTAGATGAGGATGGAGTAGATAGGAGAGCTGGTGAAAATCCGGAAGAGGATGTTGAAGAAGTAAGTGAAGAACCTCAAGTTGGGACCAACACAGAAGATAAATTTTCAGGAGATGGTAGAAATAACATATCCATAGAGTCTATAGAAAATAGAGAAAAGTCTGCTTCTTTATTAGATGAAGATGATCTAGAGAAGCATGCTCAGCTTCTTGCCCTTCCTCCTCATGGATCTGAAGTTTTTATTGGTGGACTTTCACGTGATGTTTTAGAAGAAGATTTGAGAGATTTGTGTGAATCACTAGGAGAAATATTTGAGATAAGGATAATAAAAGACAGAGATTCTGGTGAAAGCAAAGGTTATGCTTTTATATCGTTTAAAACCAAAGAGGCAGCACAAAAGGCTATAGAGGATTTGCATGGTAAAGAAGTCAAGGGTAAAACGATAAGGTGTTCTCTGTCTGATTCTAAACACAGACTATTTATTGGTAATGTCCCAAAAAGTTGGACGGACGATGAGTTTAAGGAACTTATAGAAGGAGTTGGCCCTGGAGTTGAAAACATTGAGCTTATTAAGGATCCTCAGAACCCAAGTCGAAATCGTGGATTTGCATTTGTTCTGTATTATAACAATGCTTGTGCTGATTATTCAAGGCAGAAAATGTCTAGTGCAAATTTTAAGCTGGATGGAAATTCCCCAACTGTTAGTTGGGCTGATCCAAAAAGTATGCCCGATAACTCTGCTGCTGCTCAGGTGAAGGCTCTTTATGTGAAAAACATACCTGAGAATACTACTACTGAGCAATTGAAAGAACTGTTTCAGCAGCATGGGGAAGTGACAAAAGTGAACATGCCACCTGGCAAAGCTGGGAGTAGTAAACGAGATTTTGCATTCATCCATTATGCTGAGAGGTCAAGTGCATTGAAGGCTGTTAAAGAGACAGAGAAATATGAAATTGAAGGCCAACTTTTGGAGGTTGTCCTTGCAAAGCCTCAAAGTGATAAAAAATCAGACGGGGCTTATTCCCATATATCTGGAAGTCATCCCAACCATCTTCTTCATGGTGGATACGGTGGTTATGGCGGAAATCCATATGGTTCCCTAGGTGGGTATGGTGTTACTGCTGGATTCCATCAGCCAATGATTTATGGTAGGGGGCCAATGCCAGCCGGAATGCAGATGGTACCAATGGTTTTACCAGATGGTCGAATTGGTTATGTTCTTCAGCAACCTGGAGTACCAATGCCACCTTCTCGATCTCGAAGAAGTGAGAGGAGCAATGGGTCAGGTGGACCAACGGGTCGTTCGGGAGGTAGTAGCAGTGGTGATGAAGTCAACCGCGGCAGAAGGTATCGACCCTATTAA

Protein sequence

MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVSEEPQVGTNTEDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIRCSLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQSDKKSDGAYSHISGSHPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRSGGSSSGDEVNRGRRYRPY
BLAST of Lsi05G021740 vs. Swiss-Prot
Match: HNRPR_HUMAN (Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens GN=HNRNPR PE=1 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.5e-46
Identity = 140/423 (33.10%), Postives = 214/423 (50.59%), Query Frame = 1

Query: 102 PPHGSEVFIGGLSRDVLEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQ 161
           P  G+EVF+G + RD+ E++L  L E  G I+++R++ D  SG+++GYAFI+F  KEAAQ
Sbjct: 161 PGIGTEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQ 220

Query: 162 KAIEDLHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIK 221
           +A++     E++ GK +   +S + +RLF+G++PK+ T +   E    V  G+ ++ L  
Sbjct: 221 EAVKLCDSYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYH 280

Query: 222 DPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQV 281
            P +  +NRGF F+ Y ++  A  +R+++ S   K+ GN  TV WADP   PD    A+V
Sbjct: 281 QPDDKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKV 340

Query: 282 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 341
           K L+V+N+    T E L++ F + G++ +V           +D+AF+H+ +R +A+KA+ 
Sbjct: 341 KVLFVRNLATTVTEEILEKSFSEFGKLERV--------KKLKDYAFVHFEDRGAAVKAMD 400

Query: 342 ETEKYEIEGQLLEVVLAKPQSDKKSD---GAYSHISGSHPNHLLH--------------- 401
           E    EIEG+ +E+VLAKP   K+ +      +  S ++ ++  H               
Sbjct: 401 EMNGKEIEGEEIEIVLAKPPDKKRKERQAARQASRSTAYEDYYYHPPPRMPPPIRGRGRG 460

Query: 402 GGYGGYGGNP--------YGSLGGY---GVTAGFHQP--------MIYGRG--------- 461
           GG GGYG  P        Y    GY       G+  P         + GRG         
Sbjct: 461 GGRGGYGYPPDYYGYEDYYDDYYGYDYHDYRGGYEDPYYGYDDGYAVRGRGGGRGGRGAP 520

Query: 462 PMPAGMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRS-GGSSSGDEV 477
           P P G    P   P GR GY   Q G P+ P R  R     G GGP  +  G  S G   
Sbjct: 521 PPPRGRGAPP---PRGRAGY--SQRGAPLGPPRGSR----GGRGGPAQQQRGRGSRGSRG 566

BLAST of Lsi05G021740 vs. Swiss-Prot
Match: HNRPQ_HUMAN (Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens GN=SYNCRIP PE=1 SV=2)

HSP 1 Score: 176.4 bits (446), Expect = 7.5e-43
Identity = 124/388 (31.96%), Postives = 199/388 (51.29%), Query Frame = 1

Query: 102 PPHGSEVFIGGLSRDVLEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQ 161
           P  G+E+F+G + RD+ E++L  L E  G I+++R++ D  +G ++GYAF++F TKEAAQ
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217

Query: 162 KAIEDLHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIK 221
           +A++  +  E++ GK I   +S + +RLF+G++PKS T ++  E    V  G+ ++ L  
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277

Query: 222 DPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQV 281
            P +  +NRGF F+ Y ++  A  +R+++ S   K+ GN  TV WADP   PD    A+V
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337

Query: 282 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 341
           K L+V+N+    T E L++ F Q G++ +V           +D+AFIH+ ER  A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKAFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 397

Query: 342 ETEKYEIEGQLLEVVLAKPQSDKKSDGAYSHISGSHPNHLLHGGYGGYG---------GN 401
           E    ++EG+ +E+V AKP   K+ +      +  +    ++  Y  YG         G 
Sbjct: 398 EMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAAKNQ---MYDDYYYYGPPHMPPPTRGR 457

Query: 402 PYGSLGGYGVT------AGFHQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPMPP 461
             G  GGYG          ++    Y       G +       D   GY   Q G     
Sbjct: 458 GRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGGYE-------DPYYGYEDFQVGARGRG 517

Query: 462 SRSRRS---ERSNGSGGPTGRSGGSSSG 471
            R  R     R  G+  P GR+G S  G
Sbjct: 518 GRGARGAAPSRGRGAAPPRGRAGYSQRG 527

BLAST of Lsi05G021740 vs. Swiss-Prot
Match: HNRPQ_RAT (Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus GN=Syncrip PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 9.8e-43
Identity = 124/388 (31.96%), Postives = 199/388 (51.29%), Query Frame = 1

Query: 102 PPHGSEVFIGGLSRDVLEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQ 161
           P  G+E+F+G + RD+ E++L  L E  G I+++R++ D  +G ++GYAF++F TKEAAQ
Sbjct: 68  PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 127

Query: 162 KAIEDLHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIK 221
           +A++  +  E++ GK I   +S + +RLF+G++PKS T ++  E    V  G+ ++ L  
Sbjct: 128 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 187

Query: 222 DPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQV 281
            P +  +NRGF F+ Y ++  A  +R+++ S   K+ GN  TV WADP   PD    A+V
Sbjct: 188 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 247

Query: 282 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 341
           K L+V+N+    T E L++ F Q G++ +V           +D+AFIH+ ER  A+KA++
Sbjct: 248 KVLFVRNLANTVTEEILEKSFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 307

Query: 342 ETEKYEIEGQLLEVVLAKPQSDKKSDGAYSHISGSHPNHLLHGGYGGYG---------GN 401
           E    ++EG+ +E+V AKP   K+ +      +  +    ++  Y  YG         G 
Sbjct: 308 EMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAAKNQ---MYDDYYYYGPPHMPPPTRGR 367

Query: 402 PYGSLGGYGVT------AGFHQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPMPP 461
             G  GGYG          ++    Y       G +       D   GY   Q G     
Sbjct: 368 GRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGGYE-------DPYYGYEDFQVGARGRG 427

Query: 462 SRSRRS---ERSNGSGGPTGRSGGSSSG 471
            R  R     R  G+  P GR+G S  G
Sbjct: 428 GRGARGAAPSRGRGAAPPRGRAGYSQRG 437

BLAST of Lsi05G021740 vs. Swiss-Prot
Match: HNRPQ_MOUSE (Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus GN=Syncrip PE=1 SV=2)

HSP 1 Score: 176.0 bits (445), Expect = 9.8e-43
Identity = 124/388 (31.96%), Postives = 199/388 (51.29%), Query Frame = 1

Query: 102 PPHGSEVFIGGLSRDVLEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQ 161
           P  G+E+F+G + RD+ E++L  L E  G I+++R++ D  +G ++GYAF++F TKEAAQ
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217

Query: 162 KAIEDLHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIK 221
           +A++  +  E++ GK I   +S + +RLF+G++PKS T ++  E    V  G+ ++ L  
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277

Query: 222 DPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQV 281
            P +  +NRGF F+ Y ++  A  +R+++ S   K+ GN  TV WADP   PD    A+V
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337

Query: 282 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 341
           K L+V+N+    T E L++ F Q G++ +V           +D+AFIH+ ER  A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKSFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 397

Query: 342 ETEKYEIEGQLLEVVLAKPQSDKKSDGAYSHISGSHPNHLLHGGYGGYG---------GN 401
           E    ++EG+ +E+V AKP   K+ +      +  +    ++  Y  YG         G 
Sbjct: 398 EMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAAKNQ---MYDDYYYYGPPHMPPPTRGR 457

Query: 402 PYGSLGGYGVT------AGFHQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPMPP 461
             G  GGYG          ++    Y       G +       D   GY   Q G     
Sbjct: 458 GRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGGYE-------DPYYGYEDFQVGARGRG 517

Query: 462 SRSRRS---ERSNGSGGPTGRSGGSSSG 471
            R  R     R  G+  P GR+G S  G
Sbjct: 518 GRGARGAAPSRGRGAAPPRGRAGYSQRG 527

BLAST of Lsi05G021740 vs. Swiss-Prot
Match: RBM46_DANRE (Probable RNA-binding protein 46 OS=Danio rerio GN=rbm46 PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 5.0e-39
Identity = 104/288 (36.11%), Postives = 158/288 (54.86%), Query Frame = 1

Query: 102 PPHGSEVFIGGLSRDVLEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQ 161
           PP G EVF+G + RD+ E++L  + E  G I+E R++ +  SGE++GYAF+ + T+E AQ
Sbjct: 41  PPRGREVFVGKIPRDMYEDELVPVFEQAGHIYEFRLMMEF-SGENRGYAFVMYTTREKAQ 100

Query: 162 KAIEDLHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIK 221
           +AI+ L   E++ GK I   +S    RLFIG++PK    +E +E +  V  GV ++ +  
Sbjct: 101 RAIQLLDNYEIRPGKFIGVCVSLDNCRLFIGSIPKDKKKEEIQEEMMKVTEGVMDVIVYP 160

Query: 222 DPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQV 281
              +  +NRGFAFV Y ++  A  +R+K+    F+L G++  V WA+P+   D     +V
Sbjct: 161 SAVDRMKNRGFAFVEYESHKAAAMARRKLIPGTFQLWGHTIQVDWAEPEKELDEETMQRV 220

Query: 282 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKR--DFAFIHYAERSSALKA 341
           + LYV+N+  +TT E L+  F Q        + PG     K+  D+AFIH+  R  AL A
Sbjct: 221 RVLYVRNLMLSTTEETLRSEFSQ--------LKPGSVERVKKLTDYAFIHFYNREDALTA 280

Query: 342 VKETEKYEIEGQLLEVVLAKPQSDKKSDGAYSHISGSHPNHLLHGGYG 387
           ++      I+G  +EV LAKP S  K           H      GGYG
Sbjct: 281 LESMNGKVIDGSPIEVTLAKPAS--KDGNKRFGPRNCHNGVTAAGGYG 317

BLAST of Lsi05G021740 vs. TrEMBL
Match: D7U819_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02700 PE=4 SV=1)

HSP 1 Score: 684.9 bits (1766), Expect = 7.2e-194
Identity = 358/483 (74.12%), Postives = 409/483 (84.68%), Query Frame = 1

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVSEEPQVGTNT 60
           MA+G+EVE+RVDL++DNYMEEMDDDVEE + EDGV+    EN    VEE  E+ + G + 
Sbjct: 1   MAEGTEVEDRVDLDDDNYMEEMDDDVEEQI-EDGVEGGGDEN----VEEEYEDSKAGGSG 60

Query: 61  EDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
           ED+      + I+ E +++ E   + +DED+ EKHAQLLALPPHGSE+FIGGL R+ LEE
Sbjct: 61  EDQLLEVDESRIANEPLKDEENPTASVDEDEKEKHAQLLALPPHGSEIFIGGLPREALEE 120

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
           DLRDLCE +GE  E+R++K+RDSGESKGYAFISFKTKE AQKAIE+LH KE KG+TIRCS
Sbjct: 121 DLRDLCEPIGEALEVRLMKNRDSGESKGYAFISFKTKEIAQKAIEELHSKEFKGRTIRCS 180

Query: 181 LSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
           LS+SKHRLFIGNVPKSWTDDEF+++IE +GPG ENIELIKDPQNPSRNRGFAFV YYNNA
Sbjct: 181 LSESKHRLFIGNVPKSWTDDEFRKVIEDIGPGAENIELIKDPQNPSRNRGFAFVEYYNNA 240

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL 300
           CADY RQKMSS+NFKLDGN+PTVSWADPKS  D+SAAAQVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYGRQKMSSSNFKLDGNTPTVSWADPKSTSDHSAAAQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
           FQ+HGEVTKV MPP K+G SKRDF FIH+AERSSALKAVK+TEK+EI+GQ L+V LAKPQ
Sbjct: 301 FQRHGEVTKVVMPPAKSGQSKRDFGFIHFAERSSALKAVKDTEKHEIDGQALDVSLAKPQ 360

Query: 361 SDKKSDGAYSHISGSHPNHLLHGGYGGYGGNPYGSLG-GYGVTAGFHQPMIYGRGPMPAG 420
           SDKK +G + + SG HPN L H GYGG+GGNPYGSLG GYGV+A F QP+IYGRGPMPAG
Sbjct: 361 SDKKFEGVHPYSSG-HPNFLPHPGYGGFGGNPYGSLGPGYGVSAPFQQPVIYGRGPMPAG 420

Query: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRSGGSSSGDEVNRGRRY 480
           M MVPMVLPDGRIGYVLQQPGV MPP R RR+ERSNGS G  GR G S SGD+ NR RRY
Sbjct: 421 MHMVPMVLPDGRIGYVLQQPGVQMPPPRPRRNERSNGSSGQQGRGGSSGSGDD-NRSRRY 476

Query: 481 RPY 483
           RPY
Sbjct: 481 RPY 476

BLAST of Lsi05G021740 vs. TrEMBL
Match: M5XJC0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004918mg PE=4 SV=1)

HSP 1 Score: 679.9 bits (1753), Expect = 2.3e-192
Identity = 352/487 (72.28%), Postives = 411/487 (84.39%), Query Frame = 1

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAG---ENPEEDVEEVSEEPQVG 60
           MA+G+EVEERVDL+EDNYMEEMDDDVEE +DEDGVD   G   EN EE+ EE  E+P   
Sbjct: 1   MAEGAEVEERVDLDEDNYMEEMDDDVEEQIDEDGVDGVDGGSDENVEENAEEAHEDPTTK 60

Query: 61  TNTEDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDV 120
            + +D+      ++ + E +++ EK ++ ++E++ EKHAQLLALPP+GSEVFIGGL +D 
Sbjct: 61  ASEKDQSPEPDESHNAGEFVDDEEKPSASVNEEEKEKHAQLLALPPYGSEVFIGGLPKDT 120

Query: 121 LEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTI 180
           LEEDLRDLC+ +GEI EIR+++DR++GESKGYAFI FKTKE AQKAIE+LH K  KGKT+
Sbjct: 121 LEEDLRDLCDEIGEIIEIRLMQDRETGESKGYAFIGFKTKEVAQKAIEELHNKAFKGKTL 180

Query: 181 RCSLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYY 240
           RCSLS++KHRLFIGNVPK WT+DEF+++IE VGPGVE+IELIKDPQNPSRNRGFAFVLYY
Sbjct: 181 RCSLSETKHRLFIGNVPKIWTEDEFRKVIEEVGPGVEHIELIKDPQNPSRNRGFAFVLYY 240

Query: 241 NNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQL 300
           NNACADYSRQKMS++NF+LDGNSPTV+WADPKS  D+SAAAQVKALYVKNIPENT+TE+L
Sbjct: 241 NNACADYSRQKMSNSNFRLDGNSPTVTWADPKSTSDHSAAAQVKALYVKNIPENTSTEKL 300

Query: 301 KELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLA 360
           KELFQ+HGEVTKV MPPGK G  KRDF F+H+AERSSALKAVK+TEKYEI+GQ LEVVLA
Sbjct: 301 KELFQRHGEVTKVVMPPGKGGQGKRDFGFVHFAERSSALKAVKDTEKYEIDGQPLEVVLA 360

Query: 361 KPQSDKKSDGAYSHISGSHPNHLLHGGYGG-YGGNPYGSLGG-YGVTAGFHQPMIYGRGP 420
           KPQ++KKSDGAY + +G H NHL H GYGG + GNPYGS+GG Y V AGF QPMIYGRGP
Sbjct: 361 KPQTEKKSDGAYPYNAGPHANHLSHPGYGGGFAGNPYGSVGGGYSVPAGFQQPMIYGRGP 420

Query: 421 MPAGMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRSGGSSSGDEVNR 480
           MPAGM MVPMVLPDGRIGYVLQQPG  +P  R RR +RSNG  G  GR GG S  DE NR
Sbjct: 421 MPAGMHMVPMVLPDGRIGYVLQQPGAQIPTPRPRRVDRSNGPSGQPGRGGGGS--DESNR 480

Query: 481 GRRYRPY 483
           GRRYRPY
Sbjct: 481 GRRYRPY 485

BLAST of Lsi05G021740 vs. TrEMBL
Match: I1JS33_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_03G260500 PE=4 SV=1)

HSP 1 Score: 677.2 bits (1746), Expect = 1.5e-191
Identity = 344/485 (70.93%), Postives = 414/485 (85.36%), Query Frame = 1

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVS-EEPQVGTN 60
           M++G+E++ERVDL+E+NYMEEMDDDVEE +D+DGVD    EN E  VEE   E+      
Sbjct: 1   MSEGAEIDERVDLDEENYMEEMDDDVEEQIDDDGVDGGEDENAEGSVEEHEYEDSAAEAG 60

Query: 61  TEDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLE 120
            +D+     +++I+ E  ++ +K  S +DED+ EKH +LLALPPHGSEVFIGGL RDV E
Sbjct: 61  GKDQLPEAEKSDIATEFGDDEQK-LSFIDEDEKEKHDELLALPPHGSEVFIGGLPRDVCE 120

Query: 121 EDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIRC 180
           +DLR+LCE +G+I E+R++KDRD+GE KGYAF++FKTKE AQKAIE++H KE KGKT+RC
Sbjct: 121 DDLRELCEPMGDILEVRLMKDRDTGEHKGYAFVAFKTKEVAQKAIEEIHSKEFKGKTLRC 180

Query: 181 SLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNN 240
           SLS++KHRLFIGNVPK+WT+D+F++++EGVGPGVE IELIKDPQNPSRNRGFAFVLYYNN
Sbjct: 181 SLSETKHRLFIGNVPKTWTEDDFRKVVEGVGPGVETIELIKDPQNPSRNRGFAFVLYYNN 240

Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKE 300
           ACADYSRQKM+S++FKLDGN+PTV+WADPK+ PD+SA++QVKALYVKNIPEN TTEQLKE
Sbjct: 241 ACADYSRQKMASSSFKLDGNTPTVTWADPKNSPDHSASSQVKALYVKNIPENVTTEQLKE 300

Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
           LF++HGEVTKV MPPGKAG  KRDF FIHYAERSSALKAVK+TEKYEI+GQ+LEVVLAKP
Sbjct: 301 LFRRHGEVTKVVMPPGKAG-GKRDFGFIHYAERSSALKAVKDTEKYEIDGQMLEVVLAKP 360

Query: 361 QSDKKSDGAYSHISGSHPNHLLHGGYGGYGGNPYGSLG-GYGVTAGFHQPMIYGRGPMPA 420
           Q+DKK DG Y++  G HPNH+ H  YG + GNPYGSLG GYGV AG+ QPMIYGRGPMPA
Sbjct: 361 QADKKPDGGYAYNPGLHPNHVPHPAYGNFSGNPYGSLGAGYGVAAGYQQPMIYGRGPMPA 420

Query: 421 GMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRSGGSSSG-DEVNRGR 480
           GMQMVPM+LPDGRIGYVLQQPGV +PP+R RR++RSNG  G  GR GG +SG DE NR R
Sbjct: 421 GMQMVPMMLPDGRIGYVLQQPGVQVPPARPRRNDRSNGPSGQPGRGGGGASGNDEGNRSR 480

Query: 481 RYRPY 483
           RYRPY
Sbjct: 481 RYRPY 483

BLAST of Lsi05G021740 vs. TrEMBL
Match: V7AZJ8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G257300g PE=4 SV=1)

HSP 1 Score: 673.3 bits (1736), Expect = 2.2e-190
Identity = 349/491 (71.08%), Postives = 408/491 (83.10%), Query Frame = 1

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVSE--EPQVGT 60
           M++G+E++ERVDL+E+N+MEEMDDDVEE +D+DGVD    EN E  VEE  E  +     
Sbjct: 1   MSEGAEIDERVDLDEENFMEEMDDDVEEQIDDDGVDGGEDENAEGSVEEHDEYEDSTAEV 60

Query: 61  NTEDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVL 120
             +D      +++I+ E  ++ +K  S +DED+ EKH +LLALPPHGSEVFIGGL RDV 
Sbjct: 61  GGKDHLPEAEKSDIATEFGDDDQKP-SFIDEDEKEKHDELLALPPHGSEVFIGGLPRDVC 120

Query: 121 EEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIR 180
           E+DLRDLCE +G+I E+R++KDRD+GE+KGYAF++FKTKE AQKAIE++H +E KGKT+R
Sbjct: 121 EDDLRDLCEPVGDILEVRLMKDRDTGENKGYAFVAFKTKEVAQKAIEEIHSREFKGKTLR 180

Query: 181 CSLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYN 240
           CSLS++KHRLFIGNVPK+WT+D+F+++IEGVGPGVENIELIKDPQNPSRNRGFAFVLYYN
Sbjct: 181 CSLSETKHRLFIGNVPKTWTEDDFRKVIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYN 240

Query: 241 NACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLK 300
           NACADYSRQKMSSA+FKLDGN+PTV+WADPK+ PD+SA++QVKALYVKNIPEN TT+QLK
Sbjct: 241 NACADYSRQKMSSASFKLDGNTPTVTWADPKNSPDHSASSQVKALYVKNIPENVTTDQLK 300

Query: 301 ELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAK 360
           ELF++HGEVTKV MPPGKAG  KRDF FIHYAERSSALKAVKETEKYEI+GQLLEVVLAK
Sbjct: 301 ELFRRHGEVTKVVMPPGKAG-GKRDFGFIHYAERSSALKAVKETEKYEIDGQLLEVVLAK 360

Query: 361 PQSDKKSDGAYSHISGSHPNHLLHGGYGGYGGNPYGSLG-GYGVTAGFHQPMIYGRGPMP 420
           PQ+DKK DG Y +  G H NHL H  YG + GNPYGSLG GYGV  G+ QPMIYGRGPMP
Sbjct: 361 PQADKKPDGGYGYNPGLHSNHLPHPAYGNFSGNPYGSLGAGYGVGGGYQQPMIYGRGPMP 420

Query: 421 AGMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRSGGSSSG------D 480
           AGMQMVPMVLPDGRIGYVLQQPGV  PPSR RR ERSNG  G  GR GG   G      D
Sbjct: 421 AGMQMVPMVLPDGRIGYVLQQPGVQAPPSRPRRIERSNGPSGQPGRGGGGGGGGGGSGND 480

Query: 481 EVNRGRRYRPY 483
           E NR RRYRPY
Sbjct: 481 EGNRSRRYRPY 489

BLAST of Lsi05G021740 vs. TrEMBL
Match: I1NCQ2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G259200 PE=4 SV=1)

HSP 1 Score: 672.2 bits (1733), Expect = 4.8e-190
Identity = 343/485 (70.72%), Postives = 411/485 (84.74%), Query Frame = 1

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVS-EEPQVGTN 60
           M++G+E++ERVDL+E+NYMEEMDDDVEE +D+DGVD    EN E   EE   E+      
Sbjct: 1   MSEGAEIDERVDLDEENYMEEMDDDVEEQIDDDGVDGVEEENAEGSFEEDEYEDSAAEAG 60

Query: 61  TEDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLE 120
            +D+     +++I+ E  ++ +K  S +DED+ EKH +LLALPPHGSEVFIGGL RDV E
Sbjct: 61  GKDQLPEAEKSDIATEFGDDEQK-LSFIDEDEKEKHDELLALPPHGSEVFIGGLPRDVCE 120

Query: 121 EDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIRC 180
           +DLR+LCE +G+I E+R++KDRD+GE+KGYAF++FKTKE AQKAIE++H KE KGKT+RC
Sbjct: 121 DDLRELCEPMGDILEVRLMKDRDTGENKGYAFVAFKTKEVAQKAIEEIHSKEFKGKTLRC 180

Query: 181 SLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNN 240
           SLS++KHRLFIGNVPK+WT+D+F++++EGVGPGVE IELIKDPQNPSRNRGFAFVLYYNN
Sbjct: 181 SLSETKHRLFIGNVPKTWTEDDFRKVVEGVGPGVETIELIKDPQNPSRNRGFAFVLYYNN 240

Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKE 300
           ACADYSRQKM+S++FKLDGN+PTV+WADPK+ PD+SA++QVKALYVKNIPEN TTEQLKE
Sbjct: 241 ACADYSRQKMASSSFKLDGNTPTVTWADPKNSPDHSASSQVKALYVKNIPENVTTEQLKE 300

Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
           LF++HGEVTKV MPPGKAG  KRDF FIHYAERSSALKAVK+TEKYEI+GQ+LEVVLAKP
Sbjct: 301 LFRRHGEVTKVVMPPGKAG-GKRDFGFIHYAERSSALKAVKDTEKYEIDGQMLEVVLAKP 360

Query: 361 QSDKKSDGAYSHISGSHPNHLLHGGYGGYGGNPYGSLG-GYGVTAGFHQPMIYGRGPMPA 420
           Q+DKK DG Y++  G HPNH+ H  YG + GNPYGSLG GYGV AG+ QPMIYGRGPMPA
Sbjct: 361 QADKKPDGGYAYNPGLHPNHIPHPAYGNFSGNPYGSLGAGYGVAAGYQQPMIYGRGPMPA 420

Query: 421 GMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRSGGSSSG-DEVNRGR 480
           GMQMVPMVLPDGRIGYVLQQPGV +P +R RR +RSNG  G  GR GG  SG DE NR R
Sbjct: 421 GMQMVPMVLPDGRIGYVLQQPGVQVPATRPRRIDRSNGPSGQPGRGGGGGSGNDEGNRSR 480

Query: 481 RYRPY 483
           RYRPY
Sbjct: 481 RYRPY 483

BLAST of Lsi05G021740 vs. TAIR10
Match: AT4G00830.1 (AT4G00830.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 578.6 bits (1490), Expect = 3.7e-165
Identity = 313/499 (62.73%), Postives = 393/499 (78.76%), Query Frame = 1

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDV-EEVSEEPQV--- 60
           M+D  + ++RVD EE +Y  EM+D+VEE   E+  +    ++ ++DV  + +EE +V   
Sbjct: 1   MSDARDNDDRVDFEEGSY-SEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDY 60

Query: 61  ----GTNTED---KFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVF 120
               G + ED   + + D  N+I IE+ ++ EK  S +D++D EK++ LL+LPPHGSEVF
Sbjct: 61  GDTKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVF 120

Query: 121 IGGLSRDVLEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHG 180
           IGGL RDV EEDLRDLCE +GEIFE+R++KDRDSG+SKGYAF++FKTK+ AQKAIE+LH 
Sbjct: 121 IGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHS 180

Query: 181 KEVKGKTIRCSLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNR 240
           KE KGKTIRCSLS++K+RLFIGN+PK+WT+DEF+++IE VGPGVENIELIKDP N +RNR
Sbjct: 181 KEFKGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNR 240

Query: 241 GFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNS-AAAQVKALYVKNI 300
           GFAFVLYYNNACADYSRQKM  +NFKL+GN+PTV+WADPKS P++S AAAQVKALYVKNI
Sbjct: 241 GFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNI 300

Query: 301 PENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIE 360
           PENT+TEQLKELFQ+HGEVTK+  PPGK G  KRDF F+HYAERSSALKAVK+TE+YE+ 
Sbjct: 301 PENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVN 360

Query: 361 GQLLEVVLAKPQSDKKSD-GAYSHISGSHPNHLLHGGYGGYGGNPYGSLG-GYGVTAGFH 420
           GQ LEVVLAKPQ+++K D  +YS+ +   P   +H  +GG+   PYG++G G G+   F 
Sbjct: 361 GQPLEVVLAKPQAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFS 420

Query: 421 QPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPM---PPSRSRRSERSNGSGGPTGR 480
           QPMIYGRG MP GMQMVPM+LPDGR+GYVLQQPG+PM   PP R RR++R+NGS G +GR
Sbjct: 421 QPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSGR 480

Query: 481 SGGSSSGDEVNRGRRYRPY 483
              S   D    GRRYRPY
Sbjct: 481 D-NSHEHDGNRGGRRYRPY 495

BLAST of Lsi05G021740 vs. TAIR10
Match: AT3G52660.1 (AT3G52660.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 398.3 bits (1022), Expect = 6.8e-111
Identity = 217/485 (44.74%), Postives = 323/485 (66.60%), Query Frame = 1

Query: 3   DGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVSEEPQVGTNTED 62
           D  E EERVDL+ DN  EE+   +EE V+ + V+       EE++EE+ EE +       
Sbjct: 13  DSMESEERVDLDGDNDPEEI---LEEEVEYEEVE-------EEEIEEIEEEIE------- 72

Query: 63  KFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEEDL 122
                    + +E  E  E + +  +E++ ++H +LLALPPHGSEV++GG+  D  E DL
Sbjct: 73  -------EEVEVEEEEEEEDAVATEEEEEKKRHVELLALPPHGSEVYLGGIPTDATEGDL 132

Query: 123 RDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIRCSLS 182
           +  C S+GE+ E+RI++++DSG+ KGYAF++F++K+ A +AI+ L+  + +GK I+CS +
Sbjct: 133 KGFCGSIGEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTLNNTDFRGKRIKCSTT 192

Query: 183 DSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNACA 242
            +KHRLF+GNVP++W + + K+    +GPGV+ +EL K+PQN  RNRGFAF+ YYN+ACA
Sbjct: 193 QAKHRLFLGNVPRNWMESDIKKAANRIGPGVQIVELPKEPQNMGRNRGFAFIEYYNHACA 252

Query: 243 DYSRQKMSSANFKLDGNSPTVSWADPKS-MPDNSAAAQVKALYVKNIPENTTTEQLKELF 302
           +YS+QKMS+ +FKLD N+PTVSWA+ +S    +S+A+QVKALY+KN+P + T E+LK LF
Sbjct: 253 EYSKQKMSNPSFKLDDNAPTVSWAESRSGGGGDSSASQVKALYIKNLPRDITQERLKALF 312

Query: 303 QQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQS 362
           + HG++ KV +PP K G     + F+HYAER+S ++A+K TE+YEI+G +L+  LAKPQ+
Sbjct: 313 EHHGKILKVVIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEIDGHMLDCTLAKPQA 372

Query: 363 DKKSD-GAYSHISGS--HPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPA 422
           D+K++     ++  S   PN+     Y G   +P+G+LGG+G +A + QP+++  G    
Sbjct: 373 DQKTNTNTVQNVQKSQLQPNYPPLLSY-GMAPSPFGALGGFGASA-YSQPLMHAGGHAAG 432

Query: 423 GMQMVPMVLPDGRIGYVLQQPGV-PMPPSRSRRSERSNGSGGPTGRSGGSSSGDEVNRGR 482
           GM M+P++LPDGRIGYVLQQPG+  MP    R S    G  G +  SG   S D      
Sbjct: 433 GMSMMPIMLPDGRIGYVLQQPGLAAMPQPPPRHSPPYRGGSGSSSSSGSKRSSDNGRGRS 471

BLAST of Lsi05G021740 vs. TAIR10
Match: AT2G44710.1 (AT2G44710.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 127.1 bits (318), Expect = 2.9e-29
Identity = 95/362 (26.24%), Postives = 185/362 (51.10%), Query Frame = 1

Query: 8   EERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVSEE-------------- 67
           +ER+DL+++    E + + EE+  E+  +R  G+   E V E  EE              
Sbjct: 108 DERLDLDDN----EPEYEAEEYGGEEFEERELGQEDHELVNEEGEELEEEIEVEEEAGEF 167

Query: 68  -PQVGTNTEDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGS-EVFIG 127
             ++G   ED  S D  ++ +IE +++ E     +D ++ E H  L         E+F+G
Sbjct: 168 ADEIGDGAEDLDSEDDDDDHAIEEVKHGET----VDVEEEEHHDVLHERRKRKEFEIFVG 227

Query: 128 GLSRDVLEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKE 187
            L +   EEDL+ +   +GE+ E+RI+K+  + +SKG AF+ F T E A++A+++L    
Sbjct: 228 SLDKGASEEDLKKVFGHVGEVTEVRILKNPQTKKSKGSAFLRFATVEQAKRAVKELKSPM 287

Query: 188 VKGKTIRCSLSDSKHRLFIGNVPKSWTDDEFKELIEGVG-PGVENIELIKDPQNPSRNRG 247
           + GK    + S     LF+GN+ K WT +  +E ++  G   +++I L++D  N + NRG
Sbjct: 288 INGKKCGVTASQDNDTLFVGNICKIWTPEALREKLKHYGVENMDDITLVEDSNNVNMNRG 347

Query: 248 FAFVLYYNNACADYSRQKMSSANFKLDGNSPT-VSWADPKSMPDNSAAAQVKALYVKNIP 307
           +AF+ + + + A  + +++   +       P  VS+ D     ++   AQVK +++  + 
Sbjct: 348 YAFLEFSSRSDAMDAHKRLVKKDVMFGVEKPAKVSFTDSFLDLEDEIMAQVKTIFIDGLL 407

Query: 308 ENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEI-E 351
            +   E++++L + +G++ KV +      + ++DF F+ +    +A+   K     E+ E
Sbjct: 408 PSWNEERVRDLLKPYGKLEKVELARNMPSARRKDFGFVTFDTHEAAVSCAKFINNSELGE 461

BLAST of Lsi05G021740 vs. TAIR10
Match: AT5G28390.1 (AT5G28390.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 113.2 bits (282), Expect = 4.4e-25
Identity = 53/101 (52.48%), Postives = 78/101 (77.23%), Query Frame = 1

Query: 249 MSSANFKLDGNSPTVSWADPKSMPD-NSAAAQVKALYVKNIPENTTTEQLKELFQQHGEV 308
           MS+ +FKLD N+PTVSWA+ +S  + +S+A+QVKALY+KN+P + T E+LK LF+ HG++
Sbjct: 1   MSNPSFKLDDNAPTVSWAESRSGGEGDSSASQVKALYIKNLPRDITQERLKALFEHHGKI 60

Query: 309 TKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIE 349
            KV +PP K G     + F+HYAER+S ++A+K TE+YEI+
Sbjct: 61  LKVVIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEID 101

BLAST of Lsi05G021740 vs. TAIR10
Match: AT4G34110.1 (AT4G34110.1 poly(A) binding protein 2)

HSP 1 Score: 92.0 bits (227), Expect = 1.0e-18
Identity = 82/283 (28.98%), Postives = 134/283 (47.35%), Query Frame = 1

Query: 108 VFIGGLSRDVLEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDL 167
           +FI  L   +  + L D   S G I   ++  D  SG+SKGY F+ +  +E+AQKAIE L
Sbjct: 126 IFIKNLDESIDHKALHDTFSSFGNIVSCKVAVD-SSGQSKGYGFVQYANEESAQKAIEKL 185

Query: 168 HG-----KEV-KGKTIRCSLSDSK------HRLFIGNVPKSWTDDEFKELIEGVGPGVEN 227
           +G     K+V  G  +R    DS         +++ N+ +S TDD+ K      G  + +
Sbjct: 186 NGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGK-ITS 245

Query: 228 IELIKDPQNPSRNRGFAFVLYYNNACADYSRQKMSSAN-FKLDGNSPTVSWADPKS---- 287
             ++KD +   +++GF FV + N   AD + + + S N  K D     V  A  KS    
Sbjct: 246 AVVMKDGE--GKSKGFGFVNFEN---ADDAARAVESLNGHKFDDKEWYVGRAQKKSERET 305

Query: 288 ---------MPDNSAAAQVKALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSK 347
                    + + +   Q   LYVKN+  + + E+LKE+F   G VT   +     G+SK
Sbjct: 306 ELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSK 365

Query: 348 RDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQSDKK 365
               F+ +A    A +A+ +     IE + L V +A+ + D++
Sbjct: 366 GS-GFVAFATPEEATEAMSQLSGKMIESKPLYVAIAQRKEDRR 400

BLAST of Lsi05G021740 vs. NCBI nr
Match: gi|659074851|ref|XP_008437831.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X2 [Cucumis melo])

HSP 1 Score: 909.1 bits (2348), Expect = 3.4e-261
Identity = 462/482 (95.85%), Postives = 476/482 (98.76%), Query Frame = 1

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVSEEPQVGTNT 60
           MAD SEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGE PEEDVEEVSEEPQVGT+T
Sbjct: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
           EDKFSGDGRNN+S+ESIENREKSASLLDED+LEKHAQLLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
           DLR++CESLGEIFEIRIIKD+DSGESKGYAFI+FKTKEAAQKAIEDLHGKEVKGKTIRCS
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCS 180

Query: 181 LSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWTDDEF+ LIEGVGPGVENIELIKDPQNP+RNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA 240

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL 300
           CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDN+AAAQVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
           FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360

Query: 361 SDKKSDGAYSHISGSHPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGM 420
           SDKKSDGAYSHISGS+PNHLLHGGYGGYGGNPYGS+GGYGVTAGFHQPMIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSIGGYGVTAGFHQPMIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRSGGSSSGDEVNRGRRYR 480
           QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGG  GRSGGSSS D+VNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYR 480

Query: 481 PY 483
           PY
Sbjct: 481 PY 482

BLAST of Lsi05G021740 vs. NCBI nr
Match: gi|449431998|ref|XP_004133787.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X2 [Cucumis sativus])

HSP 1 Score: 905.6 bits (2339), Expect = 3.7e-260
Identity = 464/482 (96.27%), Postives = 475/482 (98.55%), Query Frame = 1

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVSEEPQVGTNT 60
           MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGE PEEDVEEVSEEPQVGT+T
Sbjct: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
           EDKFS D RNN+S+ESIENREKS+SLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61  EDKFSDD-RNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
           DLRD+CESLGEIFEIRIIKD+DSGESKGYAFI+FKTKEAAQKAIEDLHGKEVKGKTIRCS
Sbjct: 121 DLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCS 180

Query: 181 LSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWTDDEF+ LIEGVGPGVENIELIKDPQNP+RNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA 240

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL 300
           CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
           FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360

Query: 361 SDKKSDGAYSHISGSHPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGM 420
           SDKKSDGAYSHISGS+PNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRSGGSSSGDEVNRGRRYR 480
           QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGG  GRSGGSSS D+VNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYR 480

Query: 481 PY 483
           PY
Sbjct: 481 PY 481

BLAST of Lsi05G021740 vs. NCBI nr
Match: gi|659074847|ref|XP_008437829.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X1 [Cucumis melo])

HSP 1 Score: 904.4 bits (2336), Expect = 8.3e-260
Identity = 462/483 (95.65%), Postives = 476/483 (98.55%), Query Frame = 1

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVSEEPQVGTNT 60
           MAD SEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGE PEEDVEEVSEEPQVGT+T
Sbjct: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
           EDKFSGDGRNN+S+ESIENREKSASLLDED+LEKHAQLLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVK-GKTIRC 180
           DLR++CESLGEIFEIRIIKD+DSGESKGYAFI+FKTKEAAQKAIEDLHGKEVK GKTIRC
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180

Query: 181 SLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNN 240
           SLSDSKHRLFIGNVPKSWTDDEF+ LIEGVGPGVENIELIKDPQNP+RNRGFAFVLYYNN
Sbjct: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240

Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKE 300
           ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDN+AAAQVKALYVKNIPENTTTEQLKE
Sbjct: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE 300

Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
           LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP
Sbjct: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360

Query: 361 QSDKKSDGAYSHISGSHPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAG 420
           QSDKKSDGAYSHISGS+PNHLLHGGYGGYGGNPYGS+GGYGVTAGFHQPMIYGRGPMPAG
Sbjct: 361 QSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSIGGYGVTAGFHQPMIYGRGPMPAG 420

Query: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRSGGSSSGDEVNRGRRY 480
           MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGG  GRSGGSSS D+VNRGRRY
Sbjct: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRY 480

Query: 481 RPY 483
           RPY
Sbjct: 481 RPY 483

BLAST of Lsi05G021740 vs. NCBI nr
Match: gi|778676745|ref|XP_011650655.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X1 [Cucumis sativus])

HSP 1 Score: 901.0 bits (2327), Expect = 9.2e-259
Identity = 464/483 (96.07%), Postives = 475/483 (98.34%), Query Frame = 1

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVSEEPQVGTNT 60
           MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGE PEEDVEEVSEEPQVGT+T
Sbjct: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
           EDKFS D RNN+S+ESIENREKS+SLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61  EDKFSDD-RNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVK-GKTIRC 180
           DLRD+CESLGEIFEIRIIKD+DSGESKGYAFI+FKTKEAAQKAIEDLHGKEVK GKTIRC
Sbjct: 121 DLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180

Query: 181 SLSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNN 240
           SLSDSKHRLFIGNVPKSWTDDEF+ LIEGVGPGVENIELIKDPQNP+RNRGFAFVLYYNN
Sbjct: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240

Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKE 300
           ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKE
Sbjct: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKE 300

Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
           LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP
Sbjct: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360

Query: 361 QSDKKSDGAYSHISGSHPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAG 420
           QSDKKSDGAYSHISGS+PNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAG
Sbjct: 361 QSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAG 420

Query: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRSGGSSSGDEVNRGRRY 480
           MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGG  GRSGGSSS D+VNRGRRY
Sbjct: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRY 480

Query: 481 RPY 483
           RPY
Sbjct: 481 RPY 482

BLAST of Lsi05G021740 vs. NCBI nr
Match: gi|225453602|ref|XP_002264834.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein R [Vitis vinifera])

HSP 1 Score: 684.9 bits (1766), Expect = 1.0e-193
Identity = 358/483 (74.12%), Postives = 409/483 (84.68%), Query Frame = 1

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGENPEEDVEEVSEEPQVGTNT 60
           MA+G+EVE+RVDL++DNYMEEMDDDVEE + EDGV+    EN    VEE  E+ + G + 
Sbjct: 1   MAEGTEVEDRVDLDDDNYMEEMDDDVEEQI-EDGVEGGGDEN----VEEEYEDSKAGGSG 60

Query: 61  EDKFSGDGRNNISIESIENREKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
           ED+      + I+ E +++ E   + +DED+ EKHAQLLALPPHGSE+FIGGL R+ LEE
Sbjct: 61  EDQLLEVDESRIANEPLKDEENPTASVDEDEKEKHAQLLALPPHGSEIFIGGLPREALEE 120

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
           DLRDLCE +GE  E+R++K+RDSGESKGYAFISFKTKE AQKAIE+LH KE KG+TIRCS
Sbjct: 121 DLRDLCEPIGEALEVRLMKNRDSGESKGYAFISFKTKEIAQKAIEELHSKEFKGRTIRCS 180

Query: 181 LSDSKHRLFIGNVPKSWTDDEFKELIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
           LS+SKHRLFIGNVPKSWTDDEF+++IE +GPG ENIELIKDPQNPSRNRGFAFV YYNNA
Sbjct: 181 LSESKHRLFIGNVPKSWTDDEFRKVIEDIGPGAENIELIKDPQNPSRNRGFAFVEYYNNA 240

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL 300
           CADY RQKMSS+NFKLDGN+PTVSWADPKS  D+SAAAQVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYGRQKMSSSNFKLDGNTPTVSWADPKSTSDHSAAAQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
           FQ+HGEVTKV MPP K+G SKRDF FIH+AERSSALKAVK+TEK+EI+GQ L+V LAKPQ
Sbjct: 301 FQRHGEVTKVVMPPAKSGQSKRDFGFIHFAERSSALKAVKDTEKHEIDGQALDVSLAKPQ 360

Query: 361 SDKKSDGAYSHISGSHPNHLLHGGYGGYGGNPYGSLG-GYGVTAGFHQPMIYGRGPMPAG 420
           SDKK +G + + SG HPN L H GYGG+GGNPYGSLG GYGV+A F QP+IYGRGPMPAG
Sbjct: 361 SDKKFEGVHPYSSG-HPNFLPHPGYGGFGGNPYGSLGPGYGVSAPFQQPVIYGRGPMPAG 420

Query: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRSGGSSSGDEVNRGRRY 480
           M MVPMVLPDGRIGYVLQQPGV MPP R RR+ERSNGS G  GR G S SGD+ NR RRY
Sbjct: 421 MHMVPMVLPDGRIGYVLQQPGVQMPPPRPRRNERSNGSSGQQGRGGSSGSGDD-NRSRRY 476

Query: 481 RPY 483
           RPY
Sbjct: 481 RPY 476

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
HNRPR_HUMAN2.5e-4633.10Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens GN=HNRNPR PE=1 SV=1[more]
HNRPQ_HUMAN7.5e-4331.96Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens GN=SYNCRIP PE=1 SV=2[more]
HNRPQ_RAT9.8e-4331.96Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus GN=Syncrip PE=2 S... [more]
HNRPQ_MOUSE9.8e-4331.96Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus GN=Syncrip PE=1 SV=2[more]
RBM46_DANRE5.0e-3936.11Probable RNA-binding protein 46 OS=Danio rerio GN=rbm46 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
D7U819_VITVI7.2e-19474.12Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02700 PE=4 SV=... [more]
M5XJC0_PRUPE2.3e-19272.28Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004918mg PE=4 SV=1[more]
I1JS33_SOYBN1.5e-19170.93Uncharacterized protein OS=Glycine max GN=GLYMA_03G260500 PE=4 SV=1[more]
V7AZJ8_PHAVU2.2e-19071.08Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G257300g PE=4 SV=1[more]
I1NCQ2_SOYBN4.8e-19070.72Uncharacterized protein OS=Glycine max GN=GLYMA_19G259200 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G00830.13.7e-16562.73 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT3G52660.16.8e-11144.74 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT2G44710.12.9e-2926.24 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT5G28390.14.4e-2552.48 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT4G34110.11.0e-1828.98 poly(A) binding protein 2[more]
Match NameE-valueIdentityDescription
gi|659074851|ref|XP_008437831.1|3.4e-26195.85PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X2 [Cucumis melo][more]
gi|449431998|ref|XP_004133787.1|3.7e-26096.27PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X2 [Cucumis sativus... [more]
gi|659074847|ref|XP_008437829.1|8.3e-26095.65PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X1 [Cucumis melo][more]
gi|778676745|ref|XP_011650655.1|9.2e-25996.07PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X1 [Cucumis sativus... [more]
gi|225453602|ref|XP_002264834.1|1.0e-19374.12PREDICTED: heterogeneous nuclear ribonucleoprotein R [Vitis vinifera][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR012677Nucleotide-bd_a/b_plait_sf
IPR003954RRM_dom_euk
IPR000504RRM_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000245 spliceosomal complex assembly
biological_process GO:0071395 cellular response to jasmonic acid stimulus
biological_process GO:1902464 regulation of histone H3-K27 trimethylation
biological_process GO:0010439 regulation of glucosinolate biosynthetic process
biological_process GO:0009909 regulation of flower development
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0045824 negative regulation of innate immune response
biological_process GO:0042742 defense response to bacterium
biological_process GO:0050832 defense response to fungus
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0015030 Cajal body
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0030529 intracellular ribonucleoprotein complex
cellular_component GO:0005829 cytosol
cellular_component GO:0005634 nucleus
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003682 chromatin binding
molecular_function GO:0003729 mRNA binding
molecular_function GO:0043565 sequence-specific DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G021740.1Lsi05G021740.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 283..352
score: 6.1E-16coord: 188..254
score: 1.7E-9coord: 108..178
score: 4.4
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 107..180
score: 3.4E-27coord: 187..264
score: 5.3E-11coord: 282..355
score: 1.1
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 281..359
score: 15.869coord: 106..184
score: 20.286coord: 186..268
score: 12
IPR003954RNA recognition motif domain, eukaryoteSMARTSM00361rrm2_1coord: 107..180
score: 4.
IPR012677Nucleotide-binding alpha-beta plait domainGENE3DG3DSA:3.30.70.330coord: 263..368
score: 1.8E-24coord: 109..262
score: 5.4
IPR012677Nucleotide-binding alpha-beta plait domainunknownSSF54928RNA-binding domain, RBDcoord: 187..273
score: 1.07E-15coord: 103..194
score: 2.64E-46coord: 278..362
score: 2.64
NoneNo IPR availablePANTHERPTHR24012FAMILY NOT NAMEDcoord: 7..25
score: 1.3E-208coord: 103..230
score: 1.3E-208coord: 280..480
score: 1.3E
NoneNo IPR availablePANTHERPTHR24012:SF479RNA RECOGNITION MOTIF-CONTAINING PROTEINcoord: 103..230
score: 1.3E-208coord: 280..480
score: 1.3E-208coord: 7..25
score: 1.3E