Cla97C05G080470 (gene) Watermelon (97103) v2

Overview
NameCla97C05G080470
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionHeterogeneous nuclear ribonucleoprotein Q
LocationCla97Chr05 : 554853 .. 558400 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGATGGTTCAGAAGTCGAGGAGCGGGTGGATCTTGAAGAGGACAATTACATGGAAGAGATGGATGATGATGTAGAAGAACACGTAGATGAGGATGGAGTCGATAGGAGAGCTGGTGAACATCCGGAAGAGGATGTTGAAGAAGTTAGTGAAGAGCCTCAAGTTGGGACCAACGCAGAAGATAAATTTCCAGGAGATGGTAGAAATAACGTATCCATAGAGTCTATAGAAAATAGAGAAAAATCTGCTTCTTTATTAGATGAAGATGATCTAGAGAAGCATGCTCAGCTTCTTGGCCTTCCTCCTCATGGATCTGAAGTTTTTATTGGTGGACTTTCACGTGATGTTTTAGAAGAAGATTTGAGAGATTTGTGTGAACCACTAGGAGAAATATTTGAGGTCTGCAGTGTTGTTTATTCTCTCTCATGCTCTTTCTTTCTTTCTTTAGTCCTTTGATTTTAGAGGTACGTTCTGTAATACAATTGTTGTGCAGATAAGGATAATAAAAGACAGAGATTCTGGTGAAAGCAAAGGCTATGCTTTTATATCGTTTAAAACCAAAGAGGCAGCACAAAAGGCTATAGAGGATTTGCATGGTAAAGAAGTCAAGGTAGTTCTGGGAGTCCTCAAGACTTTGATGATCTTATTACTTTATTATGTTTCGAAGCACCAAAGCTGCTGTTTTTCAGATATCCATCATCGATAGATTTAAAACTGATTTTAGTTCATTCTCCACACTACAGGGTAAAACGATAAGGTGTTCTCTGTCTGATTCTAAACACAGACTGTTTATTGGTAATGTTCCAAAAAGTTGGACGGATGATGAGTTTAAGAGACTTATAGAAGGAGTTGGCCCTGGAGTTGAAAACATTGAGCTTATTAAGGTGGAATTGCAAATTTATACATCTTCTCTAGAAATTCGTAGTTATTGAGGCTTTATGTTCTTTCTTCTGTATAACCTATTGCAGGATCCTCAGAACCCAAGCCGAAATCGTGGATTTGCATTTGTTCTGTATTATAACAATGCCTGTGCTGATTATTCGAGGCAGAAAATGTCAAGTGCAAATTTTAAGCTGGATGGAAATTCCCCAACTGTTAGTTGGGCCGATCCAAAAAGTATGCCTGATAACTCTGCTGCTGCTCAGGTAATCAAGCTATCATCACTGGAGAATTATATGACATTTTTCAAGTATCTTGAAATTTCATATCAACTGGAATTTGGTTGAAAAATGTGGTATTAAGGCTAAAAGAGTAAACTGAAACTGTTGTTGGGCAGAGAAAAGTCTCGTGTCATGCTGCTTTGTTTCTTCAATTTCAATTACTTAACAAGCCAGCCAGATATGAGATATCCGAGCCACAAAATTATATTGATTGGCCAACTGAACATTGAGCAAGGAGATGTGAGTAAAAAGATGGTCATCTTGGTGATTTTGAAGTACCTAATTGCCTAAATTCCCCCTTGAGCCAAGCTCAGTACAAAACCCACCTGACAGAGTAGTCTGCTGCACCCCACTAATCCTCTAGTTGACCGCTGACAAACTTCAGCGAATTCTAACTATCATTTTTAACGAACCATTAGTCTACCATTATGCTATAGTGAAATTAAGTAAAGAAAGGAAAGCTTAAAGCTTTCGGTTCTCCTTTGTTCAACCTTCTCACTGAAGCATGCCCTTCCTCTCACCCAACAACTTATAGGAATATATAAATAAGACTAAAATGAAGATGAAATACTAATATAAGTTGTATGTTCTTGTAGATTCTTTCATTTTTCTCAATGAAAACTGGGATTTTTGTAAATAATAATAATAATAACTATCTAACTACTAGGTAACAAGATTTAGTGCATGAATGAATATTAAATTTTTACCTCTCTCTAGGCAGTGCATCTCCTTGGCGGACATGTGAGAATTGAATTCAATACTTGACCATTAAAGTAGACCTTCATGTTTCCAGTTGATTCTATCTATGAAACCTTTAAATTGATTTTCAACAATTCTCTTTATGAATGTGTATTGAGATGTACTTGAAAGAATTGAATCATAATTTGAAATACGATTTAGTTTCCAAATTTACAGGAAGATATTTAAAAGCACACGATAGTTTGAGTAACTACATTGTCAGTGGTGAAGTCTATAAAGACTTGTTTTGTTTTGGCATTGACTGCGTGATTTCTTATTTGTTTGTTCTCGTAAGTTAAGGTCTACAACATTATGGATTGCAGGTGAAGGCTCTTTATGTAAAAAACATACCTGAGAATACTACTACCGAGCAATTGAAAGAACTGTTTCAGCAGCATGGGGAAGTGACAAAAGTGAATATGCCACCTGGCAAAGCTGGGAGTAGTAAACGGGATTTTGCATTCATCCATTATGCTGAGAGGTCAAGTGCATTGAAGGCTGTTAAAGAGACAGAGAAATATGAAATTGAAGGTTTTGTTTTTTTACCCTCAGAGATTTACATTTGAAATCTCAAATGCACAATCATATTCCTTTTCTTTACATTAAAAAAGAAAGCGTTAAAACATATTTTGGCTTTCATTTCTGTTGGTTGATACGTGCGTGCATAATCAAATTAGGCCGACTGCCTAGTGAGCCACTCTTTTCTTGACAGCTCGTTGGCAGTGTTTTATCTCTATTTAATGCAATGGACGATCTGTTCAACTTATGTATTGAATTTCATTTTTTTCATATCCTCAACATTTAAAAATAAAGTAGTACGAATCAGCAGTAGTCAAGTTGTCTAAACAGATCTGTTGTATTTGACAATGTTCTATAAAGAAACAAAAAAAAGAATGATAAAAGGGATCAAGAAATGCTTTGTTTGAACTTTTTTCTTTCAACCCAAAGTATAATCTACAGAGATTTTAATCTGCAGGCCAACTTTTGGAGGTTGTCCTCGCAAAGCCTCAAAGTGATAAAAAATCAGATGGGACCTATTCCCATATATCTGGAAGTCATCCCAACCATCTTCTTCATGGTGGATACGGTGGTTATGGCGGAAATCCATATGGTTCCCTAGGTGGGTATGGTGTTACTGCTGGTTTCCATCAGGTACATATTTCTTCTTTCTTACTTTTCAAGGCTTTAATGAAAAAATTATATAGAGGTCAAAATTCCTCTGCTGCATCTCCGTTAGGTGTATCTCCCAAAGTGAAAAGAAATGATAGAAGATTTTGGTCTTTTTCTTTTTTCCTCCACACTAATCTAATGGATTTTCTTCCATGAACAGCCAATGATTTATGGTAGGGGGCCAATGCCAGCGGGAATGCAGATGGTACCAATGGTTTTACCAGATGGTCGAATTGGTTATGTTCTGTAAGACATCATTCTTACTTGACTTGAAGTCCATTTTTATATAATTATATAAGATAGTAAATTGTATATATTGTCACCTGTGAGTGCAGTCAGCAACCCGGAGTACCAATGCCACCTTCTCGATCTCGAAGAAGTGAGAGGAGCAATGGGTCAGGTGGACCAACGGGCCGTTCGGGAGGCAGTAGCAGTGGTGATGAAGTCAACCGCAGCAGAAGGTATCGACCCTATTAA

mRNA sequence

ATGGCAGATGGTTCAGAAGTCGAGGAGCGGGTGGATCTTGAAGAGGACAATTACATGGAAGAGATGGATGATGATGTAGAAGAACACGTAGATGAGGATGGAGTCGATAGGAGAGCTGGTGAACATCCGGAAGAGGATGTTGAAGAAGTTAGTGAAGAGCCTCAAGTTGGGACCAACGCAGAAGATAAATTTCCAGGAGATGGTAGAAATAACGTATCCATAGAGTCTATAGAAAATAGAGAAAAATCTGCTTCTTTATTAGATGAAGATGATCTAGAGAAGCATGCTCAGCTTCTTGGCCTTCCTCCTCATGGATCTGAAGTTTTTATTGGTGGACTTTCACGTGATGTTTTAGAAGAAGATTTGAGAGATTTGTGTGAACCACTAGGAGAAATATTTGAGATAAGGATAATAAAAGACAGAGATTCTGGTGAAAGCAAAGGCTATGCTTTTATATCGTTTAAAACCAAAGAGGCAGCACAAAAGGCTATAGAGGATTTGCATGGTAAAGAAGTCAAGGGTAAAACGATAAGGTGTTCTCTGTCTGATTCTAAACACAGACTGTTTATTGGTAATGTTCCAAAAAGTTGGACGGATGATGAGTTTAAGAGACTTATAGAAGGAGTTGGCCCTGGAGTTGAAAACATTGAGCTTATTAAGGATCCTCAGAACCCAAGCCGAAATCGTGGATTTGCATTTGTTCTGTATTATAACAATGCCTGTGCTGATTATTCGAGGCAGAAAATGTCAAGTGCAAATTTTAAGCTGGATGGAAATTCCCCAACTGTTAGTTGGGCCGATCCAAAAAGTATGCCTGATAACTCTGCTGCTGCTCAGGTGAAGGCTCTTTATGTAAAAAACATACCTGAGAATACTACTACCGAGCAATTGAAAGAACTGTTTCAGCAGCATGGGGAAGTGACAAAAGTGAATATGCCACCTGGCAAAGCTGGGAGTAGTAAACGGGATTTTGCATTCATCCATTATGCTGAGAGGTCAAGTGCATTGAAGGCTGTTAAAGAGACAGAGAAATATGAAATTGAAGGCCAACTTTTGGAGGTTGTCCTCGCAAAGCCTCAAAGTGATAAAAAATCAGATGGGACCTATTCCCATATATCTGGAAGTCATCCCAACCATCTTCTTCATGGTGGATACGGTGGTTATGGCGGAAATCCATATGGTTCCCTAGGTGGGTATGGTGTTACTGCTGGTTTCCATCAGCCAATGATTTATGGTAGGGGGCCAATGCCAGCGGGAATGCAGATGGTACCAATGGTTTTACCAGATGGTCGAATTGGTTATGTTCTTCAGCAACCCGGAGTACCAATGCCACCTTCTCGATCTCGAAGAAGTGAGAGGAGCAATGGGTCAGGTGGACCAACGGGCCGTTCGGGAGGCAGTAGCAGTGGTGATGAAGTCAACCGCAGCAGAAGGTATCGACCCTATTAA

Coding sequence (CDS)

ATGGCAGATGGTTCAGAAGTCGAGGAGCGGGTGGATCTTGAAGAGGACAATTACATGGAAGAGATGGATGATGATGTAGAAGAACACGTAGATGAGGATGGAGTCGATAGGAGAGCTGGTGAACATCCGGAAGAGGATGTTGAAGAAGTTAGTGAAGAGCCTCAAGTTGGGACCAACGCAGAAGATAAATTTCCAGGAGATGGTAGAAATAACGTATCCATAGAGTCTATAGAAAATAGAGAAAAATCTGCTTCTTTATTAGATGAAGATGATCTAGAGAAGCATGCTCAGCTTCTTGGCCTTCCTCCTCATGGATCTGAAGTTTTTATTGGTGGACTTTCACGTGATGTTTTAGAAGAAGATTTGAGAGATTTGTGTGAACCACTAGGAGAAATATTTGAGATAAGGATAATAAAAGACAGAGATTCTGGTGAAAGCAAAGGCTATGCTTTTATATCGTTTAAAACCAAAGAGGCAGCACAAAAGGCTATAGAGGATTTGCATGGTAAAGAAGTCAAGGGTAAAACGATAAGGTGTTCTCTGTCTGATTCTAAACACAGACTGTTTATTGGTAATGTTCCAAAAAGTTGGACGGATGATGAGTTTAAGAGACTTATAGAAGGAGTTGGCCCTGGAGTTGAAAACATTGAGCTTATTAAGGATCCTCAGAACCCAAGCCGAAATCGTGGATTTGCATTTGTTCTGTATTATAACAATGCCTGTGCTGATTATTCGAGGCAGAAAATGTCAAGTGCAAATTTTAAGCTGGATGGAAATTCCCCAACTGTTAGTTGGGCCGATCCAAAAAGTATGCCTGATAACTCTGCTGCTGCTCAGGTGAAGGCTCTTTATGTAAAAAACATACCTGAGAATACTACTACCGAGCAATTGAAAGAACTGTTTCAGCAGCATGGGGAAGTGACAAAAGTGAATATGCCACCTGGCAAAGCTGGGAGTAGTAAACGGGATTTTGCATTCATCCATTATGCTGAGAGGTCAAGTGCATTGAAGGCTGTTAAAGAGACAGAGAAATATGAAATTGAAGGCCAACTTTTGGAGGTTGTCCTCGCAAAGCCTCAAAGTGATAAAAAATCAGATGGGACCTATTCCCATATATCTGGAAGTCATCCCAACCATCTTCTTCATGGTGGATACGGTGGTTATGGCGGAAATCCATATGGTTCCCTAGGTGGGTATGGTGTTACTGCTGGTTTCCATCAGCCAATGATTTATGGTAGGGGGCCAATGCCAGCGGGAATGCAGATGGTACCAATGGTTTTACCAGATGGTCGAATTGGTTATGTTCTTCAGCAACCCGGAGTACCAATGCCACCTTCTCGATCTCGAAGAAGTGAGAGGAGCAATGGGTCAGGTGGACCAACGGGCCGTTCGGGAGGCAGTAGCAGTGGTGATGAAGTCAACCGCAGCAGAAGGTATCGACCCTATTAA

Protein sequence

MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGEHPEEDVEEVSEEPQVGTNAEDKFPGDGRNNVSIESIENREKSASLLDEDDLEKHAQLLGLPPHGSEVFIGGLSRDVLEEDLRDLCEPLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIRCSLSDSKHRLFIGNVPKSWTDDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQSDKKSDGTYSHISGSHPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGPTGRSGGSSSGDEVNRSRRYRPY
Homology
[Close]
BLAST of Cla97C05G080470 vs. NCBI nr
Match: XP_004133787.1 (PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X2 [Cucumis sativus])

HSP 1 Score: 763.5 bits (1970), Expect = 4.4e-217
Identity = 413/443 (93.23%), Postives = 423/443 (95.49%), Query Frame = 0 

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGEHPEEDVEEVSEEPQVGTNA 60
           MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGE PEEDVEEVSEEPQVGT+ 
Sbjct: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFPGDGRNNVSIESIENREKSASLLDEDDLEKHAQLLGLPPHGSEVFIGGLSRDVLEE 120
           EDKF  D RNN+S+ESIENREKS+SLLDEDDLEKHAQLL LPPHGSEVFIGGLSRDVLEE
Sbjct: 61  EDKF-SDDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLRDLCEPLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
           DLRD+CE LGEIFEIRIIKD+DSGESKGYAFI+FKTKEAAQKAIEDLHGKEVKGKTIRCS
Sbjct: 121 DLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCS 180

Query: 181 LSDSKHRLFIGNVPKSWTDDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWTDDEF+RLIEGVGPGVENIELIKDPQNP+RNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA 240

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKXXXXXXXXXXXXXX 300
           CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKXXXXXXXXXXXXXX
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKXXXXXXXXXXXXXX 300

Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
           FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360

Query: 361 SDKKSDGTYSHISGSHPNXXXXXXXXXXXXXXXXXXXGYGVTAGFHQPMIYGRGPMPAGM 420
           SDKKSDG YSHISGS+PN      XXXXXXX      GYGVTAGFHQPMIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGSYPNHLLHGGXXXXXXXPYGSLGGYGVTAGFHQPMIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPM 444
           QMVPMVLPDGRIGYVLQQPGVPM
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPM 442

[Close]
BLAST of Cla97C05G080470 vs. NCBI nr
Match: XP_008437831.1 (PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X2 [Cucumis melo])

HSP 1 Score: 761.9 bits (1966), Expect = 1.3e-216
Identity = 410/443 (92.55%), Postives = 422/443 (95.26%), Query Frame = 0 

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGEHPEEDVEEVSEEPQVGTNA 60
           MAD SEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGE PEEDVEEVSEEPQVGT+ 
Sbjct: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFPGDGRNNVSIESIENREKSASLLDEDDLEKHAQLLGLPPHGSEVFIGGLSRDVLEE 120
           EDKF GDGRNN+S+ESIENREKSASLLDED+LEKHAQLL LPPHGSEVFIGGLSRDVLEE
Sbjct: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLRDLCEPLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
           DLR++CE LGEIFEIRIIKD+DSGESKGYAFI+FKTKEAAQKAIEDLHGKEVKGKTIRCS
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCS 180

Query: 181 LSDSKHRLFIGNVPKSWTDDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWTDDEF+RLIEGVGPGVENIELIKDPQNP+RNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA 240

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKXXXXXXXXXXXXXX 300
           CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDN+AAAQVKALYV XXXXXXXXXXXXXX
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVXXXXXXXXXXXXXXX 300

Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
            QQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 XQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360

Query: 361 SDKKSDGTYSHISGSHPNXXXXXXXXXXXXXXXXXXXGYGVTAGFHQPMIYGRGPMPAGM 420
           SDKKSDG YSHISGS+PN      XXXXXXX      GYGVTAGFHQPMIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGSYPNHLLHGGXXXXXXXPYGSIGGYGVTAGFHQPMIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPM 444
           QMVPMVLPDGRIGYVLQQPGVPM
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPM 443

[Close]
BLAST of Cla97C05G080470 vs. NCBI nr
Match: XP_011650655.1 (PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X1 [Cucumis sativus] >XP_011650656.1 PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X1 [Cucumis sativus])

HSP 1 Score: 758.8 bits (1958), Expect = 1.1e-215
Identity = 413/444 (93.02%), Postives = 423/444 (95.27%), Query Frame = 0 

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGEHPEEDVEEVSEEPQVGTNA 60
           MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGE PEEDVEEVSEEPQVGT+ 
Sbjct: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFPGDGRNNVSIESIENREKSASLLDEDDLEKHAQLLGLPPHGSEVFIGGLSRDVLEE 120
           EDKF  D RNN+S+ESIENREKS+SLLDEDDLEKHAQLL LPPHGSEVFIGGLSRDVLEE
Sbjct: 61  EDKF-SDDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLRDLCEPLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVK-GKTIRC 180
           DLRD+CE LGEIFEIRIIKD+DSGESKGYAFI+FKTKEAAQKAIEDLHGKEVK GKTIRC
Sbjct: 121 DLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180

Query: 181 SLSDSKHRLFIGNVPKSWTDDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNN 240
           SLSDSKHRLFIGNVPKSWTDDEF+RLIEGVGPGVENIELIKDPQNP+RNRGFAFVLYYNN
Sbjct: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240

Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKXXXXXXXXXXXXX 300
           ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKXXXXXXXXXXXXX
Sbjct: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKXXXXXXXXXXXXX 300

Query: 301 XFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
           XFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP
Sbjct: 301 XFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360

Query: 361 QSDKKSDGTYSHISGSHPNXXXXXXXXXXXXXXXXXXXGYGVTAGFHQPMIYGRGPMPAG 420
           QSDKKSDG YSHISGS+PN      XXXXXXX      GYGVTAGFHQPMIYGRGPMPAG
Sbjct: 361 QSDKKSDGAYSHISGSYPNHLLHGGXXXXXXXPYGSLGGYGVTAGFHQPMIYGRGPMPAG 420

Query: 421 MQMVPMVLPDGRIGYVLQQPGVPM 444
           MQMVPMVLPDGRIGYVLQQPGVPM
Sbjct: 421 MQMVPMVLPDGRIGYVLQQPGVPM 443

[Close]
BLAST of Cla97C05G080470 vs. NCBI nr
Match: XP_008437829.1 (PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X1 [Cucumis melo] >XP_008437830.1 PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X1 [Cucumis melo])

HSP 1 Score: 757.3 bits (1954), Expect = 3.2e-215
Identity = 410/444 (92.34%), Postives = 422/444 (95.05%), Query Frame = 0 

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGEHPEEDVEEVSEEPQVGTNA 60
           MAD SEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGE PEEDVEEVSEEPQVGT+ 
Sbjct: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFPGDGRNNVSIESIENREKSASLLDEDDLEKHAQLLGLPPHGSEVFIGGLSRDVLEE 120
           EDKF GDGRNN+S+ESIENREKSASLLDED+LEKHAQLL LPPHGSEVFIGGLSRDVLEE
Sbjct: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLRDLCEPLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVK-GKTIRC 180
           DLR++CE LGEIFEIRIIKD+DSGESKGYAFI+FKTKEAAQKAIEDLHGKEVK GKTIRC
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180

Query: 181 SLSDSKHRLFIGNVPKSWTDDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNN 240
           SLSDSKHRLFIGNVPKSWTDDEF+RLIEGVGPGVENIELIKDPQNP+RNRGFAFVLYYNN
Sbjct: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240

Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKXXXXXXXXXXXXX 300
           ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDN+AAAQVKALYV XXXXXXXXXXXXX
Sbjct: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVXXXXXXXXXXXXXX 300

Query: 301 XFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
           X QQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP
Sbjct: 301 XXQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360

Query: 361 QSDKKSDGTYSHISGSHPNXXXXXXXXXXXXXXXXXXXGYGVTAGFHQPMIYGRGPMPAG 420
           QSDKKSDG YSHISGS+PN      XXXXXXX      GYGVTAGFHQPMIYGRGPMPAG
Sbjct: 361 QSDKKSDGAYSHISGSYPNHLLHGGXXXXXXXPYGSIGGYGVTAGFHQPMIYGRGPMPAG 420

Query: 421 MQMVPMVLPDGRIGYVLQQPGVPM 444
           MQMVPMVLPDGRIGYVLQQPGVPM
Sbjct: 421 MQMVPMVLPDGRIGYVLQQPGVPM 444

[Close]
BLAST of Cla97C05G080470 vs. NCBI nr
Match: XP_022924386.1 (heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita moschata] >XP_022924387.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita moschata] >XP_022924388.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita moschata] >XP_022924389.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita moschata])

HSP 1 Score: 746.5 bits (1926), Expect = 5.6e-212
Identity = 403/441 (91.38%), Postives = 414/441 (93.88%), Query Frame = 0 

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGEHPEEDVEEVSEEPQVGTNA 60
           MADGSEVEERVDLEEDNYMEE+DDDVEEHVDEDGVDRR GEHPE DVEEV EEP++GTN 
Sbjct: 1   MADGSEVEERVDLEEDNYMEEIDDDVEEHVDEDGVDRRDGEHPEYDVEEVGEEPRIGTNQ 60

Query: 61  EDKFPGDGRNNVSIESIENREKSASLLDEDDLEKHAQLLGLPPHGSEVFIGGLSRDVLEE 120
           EDKF GDGRNN SIESIE  EKS SLLDEDDLEKHAQLL LPPHGSE+FIGGLSRDV E+
Sbjct: 61  EDKFSGDGRNNASIESIEKIEKSTSLLDEDDLEKHAQLLALPPHGSEIFIGGLSRDVSED 120

Query: 121 DLRDLCEPLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
           DLRDLCE LGEIFEIRIIKDRDSGESKGYAFI FKTKEAAQKAIEDLHGKEVKGKTIRCS
Sbjct: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFILFKTKEAAQKAIEDLHGKEVKGKTIRCS 180

Query: 181 LSDSKHRLFIGNVPKSWTDDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
           LSDSKHRLFIGN+PKSWT+DEF+RLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNIPKSWTEDEFRRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKXXXXXXXXXXXXXX 300
           CADYSRQKMS+ NFKLDGNSPTVSWADPKSMPDNSA AQVKALYVKXXXXXXXXXXXXXX
Sbjct: 241 CADYSRQKMSNVNFKLDGNSPTVSWADPKSMPDNSAVAQVKALYVKXXXXXXXXXXXXXX 300

Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
           FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360

Query: 361 SDKKSDGTYSHISGSHPNXXXXXXXXXXXXXXXXXXXGYGVTAGFHQPMIYGRGPMPAGM 420
           SDKKSDG YSHISG +PN      XXXXXXX  X  XGYGVTAGFHQP+IYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGGNPNHILHGGXXXXXXXPYXSLXGYGVTAGFHQPVIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGV 442
           QMVPMVLPDGRIGYVLQQPGV
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGV 441

[Close]
BLAST of Cla97C05G080470 vs. TrEMBL
Match: tr|A0A1S3AUX7|A0A1S3AUX7_CUCME (heterogeneous nuclear ribonucleoprotein R isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483143 PE=4 SV=1)

HSP 1 Score: 761.9 bits (1966), Expect = 8.6e-217
Identity = 410/443 (92.55%), Postives = 422/443 (95.26%), Query Frame = 0 

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGEHPEEDVEEVSEEPQVGTNA 60
           MAD SEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGE PEEDVEEVSEEPQVGT+ 
Sbjct: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFPGDGRNNVSIESIENREKSASLLDEDDLEKHAQLLGLPPHGSEVFIGGLSRDVLEE 120
           EDKF GDGRNN+S+ESIENREKSASLLDED+LEKHAQLL LPPHGSEVFIGGLSRDVLEE
Sbjct: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLRDLCEPLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
           DLR++CE LGEIFEIRIIKD+DSGESKGYAFI+FKTKEAAQKAIEDLHGKEVKGKTIRCS
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCS 180

Query: 181 LSDSKHRLFIGNVPKSWTDDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWTDDEF+RLIEGVGPGVENIELIKDPQNP+RNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA 240

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKXXXXXXXXXXXXXX 300
           CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDN+AAAQVKALYV XXXXXXXXXXXXXX
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVXXXXXXXXXXXXXXX 300

Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
            QQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 XQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360

Query: 361 SDKKSDGTYSHISGSHPNXXXXXXXXXXXXXXXXXXXGYGVTAGFHQPMIYGRGPMPAGM 420
           SDKKSDG YSHISGS+PN      XXXXXXX      GYGVTAGFHQPMIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGSYPNHLLHGGXXXXXXXPYGSIGGYGVTAGFHQPMIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPM 444
           QMVPMVLPDGRIGYVLQQPGVPM
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPM 443

[Close]
BLAST of Cla97C05G080470 vs. TrEMBL
Match: tr|A0A1S3AUK8|A0A1S3AUK8_CUCME (heterogeneous nuclear ribonucleoprotein R isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483143 PE=4 SV=1)

HSP 1 Score: 757.3 bits (1954), Expect = 2.1e-215
Identity = 410/444 (92.34%), Postives = 422/444 (95.05%), Query Frame = 0 

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGEHPEEDVEEVSEEPQVGTNA 60
           MAD SEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGE PEEDVEEVSEEPQVGT+ 
Sbjct: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFPGDGRNNVSIESIENREKSASLLDEDDLEKHAQLLGLPPHGSEVFIGGLSRDVLEE 120
           EDKF GDGRNN+S+ESIENREKSASLLDED+LEKHAQLL LPPHGSEVFIGGLSRDVLEE
Sbjct: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLRDLCEPLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVK-GKTIRC 180
           DLR++CE LGEIFEIRIIKD+DSGESKGYAFI+FKTKEAAQKAIEDLHGKEVK GKTIRC
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180

Query: 181 SLSDSKHRLFIGNVPKSWTDDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNN 240
           SLSDSKHRLFIGNVPKSWTDDEF+RLIEGVGPGVENIELIKDPQNP+RNRGFAFVLYYNN
Sbjct: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240

Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKXXXXXXXXXXXXX 300
           ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDN+AAAQVKALYV XXXXXXXXXXXXX
Sbjct: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVXXXXXXXXXXXXXX 300

Query: 301 XFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
           X QQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP
Sbjct: 301 XXQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360

Query: 361 QSDKKSDGTYSHISGSHPNXXXXXXXXXXXXXXXXXXXGYGVTAGFHQPMIYGRGPMPAG 420
           QSDKKSDG YSHISGS+PN      XXXXXXX      GYGVTAGFHQPMIYGRGPMPAG
Sbjct: 361 QSDKKSDGAYSHISGSYPNHLLHGGXXXXXXXPYGSIGGYGVTAGFHQPMIYGRGPMPAG 420

Query: 421 MQMVPMVLPDGRIGYVLQQPGVPM 444
           MQMVPMVLPDGRIGYVLQQPGVPM
Sbjct: 421 MQMVPMVLPDGRIGYVLQQPGVPM 444

[Close]
BLAST of Cla97C05G080470 vs. TrEMBL
Match: tr|A0A0A0L709|A0A0A0L709_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118170 PE=4 SV=1)

HSP 1 Score: 611.7 bits (1576), Expect = 1.4e-171
Identity = 342/444 (77.03%), Postives = 356/444 (80.18%), Query Frame = 0 

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGEHPEEDVEEVSEEPQVGTNA 60
           MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGE PEEDVEEVSEEPQVGT+ 
Sbjct: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFPGDGRNNVSIESIENREKSASLLDEDDLEKHAQLLGLPPHGSEVFIGGLSRDVLEE 120
           EDKF  D RNN+S+ESIENREKS+SLLDEDDLEKHAQLL LPPHGSEVFIGGLSRDVLEE
Sbjct: 61  EDKF-SDDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLRDLCEPLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVK-GKTIRC 180
           DLRD+CE LGEIFEIRIIKD+DSGESKGYAFI+FKTKEAAQKAIEDLHGKEVK GKTIRC
Sbjct: 121 DLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180

Query: 181 SLSDSKHRLFIGNVPKSWTDDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNN 240
           SLSDSKHRLFIGNVPKSWTDDEF+RLIEGVGPGVENIELIK              LY   
Sbjct: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIK-----------VKALYV-- 240

Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKXXXXXXXXXXXXX 300
                                        K++P+N+   Q+K L                
Sbjct: 241 -----------------------------KNIPENTTTEQLKEL---------------- 300

Query: 301 XFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
            FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP
Sbjct: 301 -FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360

Query: 361 QSDKKSDGTYSHISGSHPNXXXXXXXXXXXXXXXXXXXGYGVTAGFHQPMIYGRGPMPAG 420
           QSDKKSDG YSHISGS+PN      XXXXXXX      GYGVTAGFHQPMIYGRGPMPAG
Sbjct: 361 QSDKKSDGAYSHISGSYPNHLLHGGXXXXXXXPYGSLGGYGVTAGFHQPMIYGRGPMPAG 384

Query: 421 MQMVPMVLPDGRIGYVLQQPGVPM 444
           MQMVPMVLPDGRIGYVLQQPGVPM
Sbjct: 421 MQMVPMVLPDGRIGYVLQQPGVPM 384

[Close]
BLAST of Cla97C05G080470 vs. TrEMBL
Match: tr|A0A2P4HI55|A0A2P4HI55_QUESU (Heterogeneous nuclear ribonucleoprotein q OS=Quercus suber OX=58331 GN=CFP56_45162 PE=4 SV=1)

HSP 1 Score: 566.2 bits (1458), Expect = 6.9e-158
Identity = 288/442 (65.16%), Postives = 344/442 (77.83%), Query Frame = 0 

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGEHPEEDVEEVSEEPQVGTNA 60
           MA+G+EVEERVDL+EDNYME               D    ++ EE+VEEV E+     + 
Sbjct: 1   MAEGTEVEERVDLDEDNYMEXXXXXXXXXXXXXXADGAGYDNDEENVEEVHEDSIAEASG 60

Query: 61  EDKFPGDGRNNVSIESIENREKSASLLDEDDLEKHAQLLGLPPHGSEVFIGGLSRDVLEE 120
           +D+ P   R +V+ ESIE+ E+  + +DE+  EK A+LL LPPHGSEVFIGGL RD  EE
Sbjct: 61  KDQSPDTDRGHVASESIEDEERPTAPIDEEKKEKWAELLALPPHGSEVFIGGLPRDAREE 120

Query: 121 DLRDLCEPLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
           DLRDLCEP+GE+ E+R++KD+D+G++KGYAFI+FKTKE AQKAIE++H KE KGKT+RCS
Sbjct: 121 DLRDLCEPIGEVLEVRLMKDKDTGDAKGYAFIAFKTKEVAQKAIEEIHSKEFKGKTLRCS 180

Query: 181 LSDSKHRLFIGNVPKSWTDDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
           LS++KHRLF+GNVPKSWT+DEF+++IE VGPG+++IELIKDPQNPSRNRGFAFVLYYNNA
Sbjct: 181 LSETKHRLFVGNVPKSWTEDEFRKVIEEVGPGLDSIELIKDPQNPSRNRGFAFVLYYNNA 240

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKXXXXXXXXXXXXXX 300
           CADYSRQKMSS NFKLDGN+PTV+WADPKS PD++AA+QVKALYVK              
Sbjct: 241 CADYSRQKMSSVNFKLDGNTPTVTWADPKSTPDHAAASQVKALYVKNIPENTSTEKLKEL 300

Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
           FQ+HGEVTKV MPPGKA S KRDF FIHYAERSSALKAVK+TEKYE++GQ+LEVVLAKPQ
Sbjct: 301 FQRHGEVTKVVMPPGKA-SGKRDFGFIHYAERSSALKAVKDTEKYEMDGQVLEVVLAKPQ 360

Query: 361 SDKKSDGTYSHISGSHPN-XXXXXXXXXXXXXXXXXXXGYGVTAGFHQPMIYGRGPMPAG 420
           +DKK +G+Y H +G HPN                    GYGV   F QP+IYGRGPMPAG
Sbjct: 361 TDKKFEGSYPHNAGPHPNHLPHPGYGGFAGNPYGSLGAGYGVATSFQQPVIYGRGPMPAG 420

Query: 421 MQMVPMVLPDGRIGYVLQQPGV 442
           M MVPMVLPDGRIGYVLQQPGV
Sbjct: 421 MHMVPMVLPDGRIGYVLQQPGV 441

[Close]
BLAST of Cla97C05G080470 vs. TrEMBL
Match: tr|D7U819|D7U819_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0048g02700 PE=4 SV=1)

HSP 1 Score: 544.7 bits (1402), Expect = 2.1e-151
Identity = 287/444 (64.64%), Postives = 329/444 (74.10%), Query Frame = 0 

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGEHPEEDVEEVSEEPQVGTNA 60
           MA+G+EVE+RVDL++DNYMEEMDDDVE                                 
Sbjct: 1   MAEGTEVEDRVDLDDDNYMEEMDDDVEXXXXXXXXG-----XXXXXXXXXXXXXXXXXXX 60

Query: 61  EDKFPGDGRNNVSIESIENREKSASLLDEDDLEKHAQLLGLPPHGSEVFIGGLSRDVLEE 120
                      ++ E +++ E   + +DED+ EKHAQLL LPPHGSE+FIGGL R+ LEE
Sbjct: 61  XXXXXXXXXXXIANEPLKDEENPTASVDEDEKEKHAQLLALPPHGSEIFIGGLPREALEE 120

Query: 121 DLRDLCEPLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIRCS 180
           DLRDLCEP+GE  E+R++K+RDSGESKGYAFISFKTKE AQKAIE+LH KE KG+TIRCS
Sbjct: 121 DLRDLCEPIGEALEVRLMKNRDSGESKGYAFISFKTKEIAQKAIEELHSKEFKGRTIRCS 180

Query: 181 LSDSKHRLFIGNVPKSWTDDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 240
           LS+SKHRLFIGNVPKSWTDDEF+++IE +GPG ENIELIKDPQNPSRNRGFAFV YYNNA
Sbjct: 181 LSESKHRLFIGNVPKSWTDDEFRKVIEDIGPGAENIELIKDPQNPSRNRGFAFVEYYNNA 240

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKXXXXXXXXXXXXXX 300
           CADY RQKMSS+NFKLDGN+PTVSWADPKS  D+SAAAQVKALYVK              
Sbjct: 241 CADYGRQKMSSSNFKLDGNTPTVSWADPKSTSDHSAAAQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
           FQ+HGEVTKV MPP K+G SKRDF FIH+AERSSALKAVK+TEK+EI+GQ L+V LAKPQ
Sbjct: 301 FQRHGEVTKVVMPPAKSGQSKRDFGFIHFAERSSALKAVKDTEKHEIDGQALDVSLAKPQ 360

Query: 361 SDKKSDGTYSHISGSHPN-XXXXXXXXXXXXXXXXXXXGYGVTAGFHQPMIYGRGPMPAG 420
           SDKK +G + + SG HPN                    GYGV+A F QP+IYGRGPMPAG
Sbjct: 361 SDKKFEGVHPYSSG-HPNFLPHPGYGGFGGNPYGSLGPGYGVSAPFQQPVIYGRGPMPAG 420

Query: 421 MQMVPMVLPDGRIGYVLQQPGVPM 444
           M MVPMVLPDGRIGYVLQQPGV M
Sbjct: 421 MHMVPMVLPDGRIGYVLQQPGVQM 438

[Close]
BLAST of Cla97C05G080470 vs. Swiss-Prot
Match: sp|Q9ASP6|HNRPQ_ARATH (Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana OX=3702 GN=LIF2 PE=1 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 1.4e-137
Identity = 245/375 (65.33%), Postives = 293/375 (78.13%), Query Frame = 0 

Query: 72  VSIESIENREKSASLLDEDDLEKHAQLLGLPPHGSEVFIGGLSRDVLEEDLRDLCEPLGE 131
           + IE+     K  S +D++D EK++ LL LPPHGSEVFIGGL RDV EEDLRDLCE +GE
Sbjct: 82  IDIETXXXXXKPPSPIDDEDREKYSHLLSLPPHGSEVFIGGLPRDVGEEDLRDLCEEIGE 141

Query: 132 IFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIRCSLSDSKHRLFIG 191
           IFE+R++KDRDSG+SKGYAF++FKTK+ AQKAIE+LH KE KGKTIRCSLS++K+RLFIG
Sbjct: 142 IFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFKGKTIRCSLSETKNRLFIG 201

Query: 192 NVPKSWTDDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNACADYSRQKMSS 251
           N+PK+WT+DEF+++IE VGPGVENIELIKDP N +RNRGFAFVLYYNNACADYSRQKM  
Sbjct: 202 NIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNRGFAFVLYYNNACADYSRQKMID 261

Query: 252 ANFKLDGNSPTVSWADPKSMPDNS-AAAQVKALYVKXXXXXXXXXXXXXXFQQHGEVTKV 311
           +NFKL+GN+PTV+WADPKS P++S AAAQVKALYVK              FQ+HGEVTK+
Sbjct: 262 SNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPENTSTEQLKELFQRHGEVTKI 321

Query: 312 NMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQSDKKSD-GTY 371
             PPGK G  KRDF F+HYAERSSALKAVK+TE+YE+ GQ LEVVLAKPQ+++K D  +Y
Sbjct: 322 VTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVNGQPLEVVLAKPQAERKHDPSSY 381

Query: 372 SHISGSHP-NXXXXXXXXXXXXXXXXXXXGYGVTAGFHQPMIYGRGPMPAGMQMVPMVLP 431
           S+ +   P                     G G+   F QPMIYGRG MP GMQMVPM+LP
Sbjct: 382 SYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFSQPMIYGRGAMPTGMQMVPMLLP 441

Query: 432 DGRIGYVLQQPGVPM 444
           DGR+GYVLQQPG+PM
Sbjct: 442 DGRVGYVLQQPGMPM 454

[Close]
BLAST of Cla97C05G080470 vs. Swiss-Prot
Match: sp|O60506|HNRPQ_HUMAN (Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens OX=9606 GN=SYNCRIP PE=1 SV=2)

HSP 1 Score: 174.9 bits (442), Expect = 2.2e-42
Identity = 92/259 (35.52%), Postives = 153/259 (59.07%), Query Frame = 0 

Query: 102 PPHGSEVFIGGLSRDVLEEDLRDLCEPLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQ 161
           P  G+E+F+G + RD+ E++L  L E  G I+++R++ D  +G ++GYAF++F TKEAAQ
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217

Query: 162 KAIEDLHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTDDEFKRLIEGVGPGVENIELIK 221
           +A++  +  E++ GK I   +S + +RLF+G++PKS T ++       V  G+ ++ L  
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277

Query: 222 DPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQV 281
            P +  +NRGF F+ Y ++  A  +R+++ S   K+ GN  TV WADP   PD    A+V
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337

Query: 282 KALYVKXXXXXXXXXXXXXXFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 341
           K L+V+              F Q G++ +V           +D+AFIH+ ER  A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKAFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 397

Query: 342 ETEKYEIEGQLLEVVLAKP 360
           E    ++EG+ +E+V AKP
Sbjct: 398 EMNGKDLEGENIEIVFAKP 408

[Close]
BLAST of Cla97C05G080470 vs. Swiss-Prot
Match: sp|Q7TMK9|HNRPQ_MOUSE (Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=2)

HSP 1 Score: 174.9 bits (442), Expect = 2.2e-42
Identity = 92/259 (35.52%), Postives = 153/259 (59.07%), Query Frame = 0 

Query: 102 PPHGSEVFIGGLSRDVLEEDLRDLCEPLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQ 161
           P  G+E+F+G + RD+ E++L  L E  G I+++R++ D  +G ++GYAF++F TKEAAQ
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217

Query: 162 KAIEDLHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTDDEFKRLIEGVGPGVENIELIK 221
           +A++  +  E++ GK I   +S + +RLF+G++PKS T ++       V  G+ ++ L  
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277

Query: 222 DPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQV 281
            P +  +NRGF F+ Y ++  A  +R+++ S   K+ GN  TV WADP   PD    A+V
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337

Query: 282 KALYVKXXXXXXXXXXXXXXFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 341
           K L+V+              F Q G++ +V           +D+AFIH+ ER  A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKSFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 397

Query: 342 ETEKYEIEGQLLEVVLAKP 360
           E    ++EG+ +E+V AKP
Sbjct: 398 EMNGKDLEGENIEIVFAKP 408

[Close]
BLAST of Cla97C05G080470 vs. Swiss-Prot
Match: sp|Q7TP47|HNRPQ_RAT (Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 2.2e-42
Identity = 99/290 (34.14%), Postives = 163/290 (56.21%), Query Frame = 0 

Query: 81  EKSASLLDEDDLEKHAQLLGLPPH----------GSEVFIGGLSRDVLEEDLRDLCEPLG 140
           +K A  LDE  +    +  G PP           G+E+F+G + RD+ E++L  L E  G
Sbjct: 37  QKVAEKLDEIYVAGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVPLFEKAG 96

Query: 141 EIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVK-GKTIRCSLSDSKHRLF 200
            I+++R++ D  +G ++GYAF++F TKEAAQ+A++  +  E++ GK I   +S + +RLF
Sbjct: 97  PIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLF 156

Query: 201 IGNVPKSWTDDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNACADYSRQKM 260
           +G++PKS T ++       V  G+ ++ L   P +  +NRGF F+ Y ++  A  +R+++
Sbjct: 157 VGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAAQARRRL 216

Query: 261 SSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKXXXXXXXXXXXXXXFQQHGEVTK 320
            S   K+ GN  TV WADP   PD    A+VK L+V+              F Q G++ +
Sbjct: 217 MSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKSFSQFGKLER 276

Query: 321 VNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
           V           +D+AFIH+ ER  A+KA++E    ++EG+ +E+V AKP
Sbjct: 277 V--------KKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKP 318

[Close]
BLAST of Cla97C05G080470 vs. Swiss-Prot
Match: sp|O43390|HNRPR_HUMAN (Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens OX=9606 GN=HNRNPR PE=1 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 7.1e-41
Identity = 91/258 (35.27%), Postives = 151/258 (58.53%), Query Frame = 0 

Query: 102 PPHGSEVFIGGLSRDVLEEDLRDLCEPLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQ 161
           P  G+EVF+G + RD+ E++L  L E  G I+++R++ D  SG+++GYAFI+F  KEAAQ
Sbjct: 161 PGIGTEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQ 220

Query: 162 KAIEDLHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTDDEFKRLIEGVGPGVENIELIK 221
           +A++     E++ GK +   +S + +RLF+G++PK+ T +        V  G+ ++ L  
Sbjct: 221 EAVKLCDSYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYH 280

Query: 222 DPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQV 281
            P +  +NRGF F+ Y ++  A  +R+++ S   K+ GN  TV WADP   PD    A+V
Sbjct: 281 QPDDKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKV 340

Query: 282 KALYVKXXXXXXXXXXXXXXFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 341
           K L+V+              F + G++ +V           +D+AF+H+ +R +A+KA+ 
Sbjct: 341 KVLFVRNLATTVTEEILEKSFSEFGKLERV--------KKLKDYAFVHFEDRGAAVKAMD 400

Query: 342 ETEKYEIEGQLLEVVLAK 359
           E    EIEG+ +E+VLAK
Sbjct: 401 EMNGKEIEGEEIEIVLAK 410

[Close]
BLAST of Cla97C05G080470 vs. TAIR10
Match: AT4G00830.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 491.1 bits (1263), Expect = 7.7e-139
Identity = 245/375 (65.33%), Postives = 293/375 (78.13%), Query Frame = 0 

Query: 72  VSIESIENREKSASLLDEDDLEKHAQLLGLPPHGSEVFIGGLSRDVLEEDLRDLCEPLGE 131
           + IE+     K  S +D++D EK++ LL LPPHGSEVFIGGL RDV EEDLRDLCE +GE
Sbjct: 82  IDIETXXXXXKPPSPIDDEDREKYSHLLSLPPHGSEVFIGGLPRDVGEEDLRDLCEEIGE 141

Query: 132 IFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLHGKEVKGKTIRCSLSDSKHRLFIG 191
           IFE+R++KDRDSG+SKGYAF++FKTK+ AQKAIE+LH KE KGKTIRCSLS++K+RLFIG
Sbjct: 142 IFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFKGKTIRCSLSETKNRLFIG 201

Query: 192 NVPKSWTDDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNACADYSRQKMSS 251
           N+PK+WT+DEF+++IE VGPGVENIELIKDP N +RNRGFAFVLYYNNACADYSRQKM  
Sbjct: 202 NIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNRGFAFVLYYNNACADYSRQKMID 261

Query: 252 ANFKLDGNSPTVSWADPKSMPDNS-AAAQVKALYVKXXXXXXXXXXXXXXFQQHGEVTKV 311
           +NFKL+GN+PTV+WADPKS P++S AAAQVKALYVK              FQ+HGEVTK+
Sbjct: 262 SNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPENTSTEQLKELFQRHGEVTKI 321

Query: 312 NMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQSDKKSD-GTY 371
             PPGK G  KRDF F+HYAERSSALKAVK+TE+YE+ GQ LEVVLAKPQ+++K D  +Y
Sbjct: 322 VTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVNGQPLEVVLAKPQAERKHDPSSY 381

Query: 372 SHISGSHP-NXXXXXXXXXXXXXXXXXXXGYGVTAGFHQPMIYGRGPMPAGMQMVPMVLP 431
           S+ +   P                     G G+   F QPMIYGRG MP GMQMVPM+LP
Sbjct: 382 SYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFSQPMIYGRGAMPTGMQMVPMLLP 441

Query: 432 DGRIGYVLQQPGVPM 444
           DGR+GYVLQQPG+PM
Sbjct: 442 DGRVGYVLQQPGMPM 454

[Close]
BLAST of Cla97C05G080470 vs. TAIR10
Match: AT3G52660.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 343.2 bits (879), Expect = 2.6e-94
Identity = 163/352 (46.31%), Postives = 243/352 (69.03%), Query Frame = 0 

Query: 94  KHAQLLGLPPHGSEVFIGGLSRDVLEEDLRDLCEPLGEIFEIRIIKDRDSGESKGYAFIS 153
           +H +LL LPPHGSEV++GG+  D  E DL+  C  +GE+ E+RI++++DSG+ KGYAF++
Sbjct: 80  RHVELLALPPHGSEVYLGGIPTDATEGDLKGFCGSIGEVTEVRIMREKDSGDGKGYAFVT 139

Query: 154 FKTKEAAQKAIEDLHGKEVKGKTIRCSLSDSKHRLFIGNVPKSWTDDEFKRLIEGVGPGV 213
           F++K+ A +AI+ L+  + +GK I+CS + +KHRLF+GNVP++W + + K+    +GPGV
Sbjct: 140 FRSKDLAAEAIDTLNNTDFRGKRIKCSTTQAKHRLFLGNVPRNWMESDIKKAANRIGPGV 199

Query: 214 ENIELIKDPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKS-MP 273
           + +EL K+PQN  RNRGFAF+ YYN+ACA+YS+QKMS+ +FKLD N+PTVSWA+ +S   
Sbjct: 200 QIVELPKEPQNMGRNRGFAFIEYYNHACAEYSKQKMSNPSFKLDDNAPTVSWAESRSGGG 259

Query: 274 DNSAAAQVKALYVKXXXXXXXXXXXXXXFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAER 333
            +S+A+QVKALY+K              F+ HG++ KV +PP K G     + F+HYAER
Sbjct: 260 GDSSASQVKALYIKNLPRDITQERLKALFEHHGKILKVVIPPAKPGKEDSRYGFVHYAER 319

Query: 334 SSALKAVKETEKYEIEGQLLEVVLAKPQSDKKSD-GTYSHISGS--HPNXXXXXXXXXXX 393
           +S ++A+K TE+YEI+G +L+  LAKPQ+D+K++  T  ++  S   PN           
Sbjct: 320 TSVMRALKNTERYEIDGHMLDCTLAKPQADQKTNTNTVQNVQKSQLQPN-YPPLLSYGMA 379

Query: 394 XXXXXXXXGYGVTAGFHQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGV 442
                   G+G +A + QP+++  G    GM M+P++LPDGRIGYVLQQPG+
Sbjct: 380 PSPFGALGGFGASA-YSQPLMHAGGHAAGGMSMMPIMLPDGRIGYVLQQPGL 429

[Close]
BLAST of Cla97C05G080470 vs. TAIR10
Match: AT2G44710.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 116.7 bits (291), Expect = 4.0e-26
Identity = 65/247 (26.32%), Postives = 127/247 (51.42%), Query Frame = 0 

Query: 107 EVFIGGLSRDVLEEDLRDLCEPLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIED 166
           E+F+G L +   EEDL+ +   +GE+ E+RI+K+  + +SKG AF+ F T E A++A+++
Sbjct: 215 EIFVGSLDKGASEEDLKKVFGHVGEVTEVRILKNPQTKKSKGSAFLRFATVEQAKRAVKE 274

Query: 167 LHGKEVKGKTIRCSLSDSKHRLFIGNVPKSWTDDEFKRLIEGVG-PGVENIELIKDPQNP 226
           L    + GK    + S     LF+GN+ K WT +  +  ++  G   +++I L++D  N 
Sbjct: 275 LKSPMINGKKCGVTASQDNDTLFVGNICKIWTPEALREKLKHYGVENMDDITLVEDSNNV 334

Query: 227 SRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPT-VSWADPKSMPDNSAAAQVKALY 286
           + NRG+AF+ + + + A  + +++   +       P  VS+ D     ++   AQVK ++
Sbjct: 335 NMNRGYAFLEFSSRSDAMDAHKRLVKKDVMFGVEKPAKVSFTDSFLDLEDEIMAQVKTIF 394

Query: 287 VKXXXXXXXXXXXXXXFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEK 346
           +                + +G++ KV +      + ++DF F+ +    +A+   K    
Sbjct: 395 IDGLLPSWNEERVRDLLKPYGKLEKVELARNMPSARRKDFGFVTFDTHEAAVSCAKFINN 454

Query: 347 YEI-EGQ 351
            E+ EG+
Sbjct: 455 SELGEGE 461

[Close]
BLAST of Cla97C05G080470 vs. TAIR10
Match: AT5G28390.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 113.6 bits (283), Expect = 3.4e-25
Identity = 66/194 (34.02%), Postives = 97/194 (50.00%), Query Frame = 0 

Query: 249 MSSANFKLDGNSPTVSWADPKSMPD-NSAAAQVKALYVKXXXXXXXXXXXXXXFQQHGEV 308
           MS+ +FKLD N+PTVSWA+ +S  + +S+A+QVKALY+K              F+ HG++
Sbjct: 1   MSNPSFKLDDNAPTVSWAESRSGGEGDSSASQVKALYIKNLPRDITQERLKALFEHHGKI 60

Query: 309 TKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQSDKKSDG 368
            KV +PP K G     + F+HYAER+S ++A+K TE+YEI+                   
Sbjct: 61  LKVVIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEID------------------- 120

Query: 369 TYSHISGSHPNXXXXXXXXXXXXXXXXXXXGYGVTAGFHQPMIYGRGPMPAGMQMVPMVL 428
                                              + + QP+++  G    GM M+P++L
Sbjct: 121 ----------------------------------ASAYSQPLMHAGGHAAGGMSMMPIML 141

Query: 429 PDGRIGYVLQQPGV 442
           PDGRI YVLQQPG+
Sbjct: 181 PDGRIRYVLQQPGL 141

[Close]
BLAST of Cla97C05G080470 vs. TAIR10
Match: AT5G40490.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 86.3 bits (212), Expect = 5.7e-17
Identity = 61/210 (29.05%), Postives = 103/210 (49.05%), Query Frame = 0 

Query: 68  GRNNVSIESIENREKSASLLDEDDLEKHAQLLGLPPHGSEVFIGGLSRDVLEEDLRDLCE 127
           G   V  + I + + S  + D+DD  +     G+   G ++F+GGL+R+    +      
Sbjct: 5   GTETVIEDEIHDPKPSEDIEDDDDKSQPHSGGGVDSAG-KIFVGGLARETTSAEFLKHFG 64

Query: 128 PLGEIFEIRIIKDRDSGESKGYAFISFKTKEAAQKAIEDLH---GK--EVKGKTIRCSLS 187
             GEI +  I+KDR +G+ +G+ F+++       K I+D H   GK  E+K    R S+S
Sbjct: 65  KYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKVIQDNHIIIGKQVEIKRTIPRGSMS 124

Query: 188 DS---KHRLFIGNVPKSWTDDEFKRLIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNN 247
            +     ++F+G +P S  DDEFK      G   E+ ++++D  +  R+RGF FV Y + 
Sbjct: 125 SNDFKTKKIFVGGIPSSVDDDEFKEFFMQFGELKEH-QIMRD-HSTGRSRGFGFVTYESE 184

Query: 248 ACADYSRQKMSSANFKLDGNSPTVSWADPK 270
              D+   K      +L G    +  A+PK
Sbjct: 185 DMVDHLLAK--GNRIELSGTQVEIKKAEPK 209

The following BLAST results are available for this feature:
BLAST of Cla97C05G080470 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004133787.14.4e-21793.23PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X2 [Cucumis sativus... [more]
XP_008437831.11.3e-21692.55PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X2 [Cucumis melo][more]
XP_011650655.11.1e-21593.02PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X1 [Cucumis sativus... [more]
XP_008437829.13.2e-21592.34PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X1 [Cucumis melo] >... [more]
XP_022924386.15.6e-21291.38heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita moschata] >XP_02292438... [more]
BLAST of Cla97C05G080470 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AUX7|A0A1S3AUX7_CUCME8.6e-21792.55heterogeneous nuclear ribonucleoprotein R isoform X2 OS=Cucumis melo OX=3656 GN=... [more]
tr|A0A1S3AUK8|A0A1S3AUK8_CUCME2.1e-21592.34heterogeneous nuclear ribonucleoprotein R isoform X1 OS=Cucumis melo OX=3656 GN=... [more]
tr|A0A0A0L709|A0A0A0L709_CUCSA1.4e-17177.03Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118170 PE=4 SV=1[more]
tr|A0A2P4HI55|A0A2P4HI55_QUESU6.9e-15865.16Heterogeneous nuclear ribonucleoprotein q OS=Quercus suber OX=58331 GN=CFP56_451... [more]
tr|D7U819|D7U819_VITVI2.1e-15164.64Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0048g02700 PE=4 SV=... [more]
BLAST of Cla97C05G080470 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9ASP6|HNRPQ_ARATH1.4e-13765.33Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana OX=3702 GN=LIF... [more]
sp|O60506|HNRPQ_HUMAN2.2e-4235.52Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens OX=9606 GN=SYNCRIP PE=... [more]
sp|Q7TMK9|HNRPQ_MOUSE2.2e-4235.52Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE... [more]
sp|Q7TP47|HNRPQ_RAT2.2e-4234.14Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncr... [more]
sp|O43390|HNRPR_HUMAN7.1e-4135.27Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens OX=9606 GN=HNRNPR PE=1... [more]
BLAST of Cla97C05G080470 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G00830.17.7e-13965.33RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT3G52660.12.6e-9446.31RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT2G44710.14.0e-2626.32RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT5G28390.13.4e-2534.02RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT5G40490.15.7e-1729.05RNA-binding (RRM/RBD/RNP motifs) family protein[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR035979RBD_domain_sf
IPR012677Nucleotide-bd_a/b_plait_sf
IPR000504RRM_dom
IPR003954RRM_dom_euk
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010439 regulation of glucosinolate biosynthetic process
biological_process GO:0042742 defense response to bacterium
biological_process GO:1902464 regulation of histone H3-K27 trimethylation
biological_process GO:0050793 regulation of developmental process
biological_process GO:0009909 regulation of flower development
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0045824 negative regulation of innate immune response
biological_process GO:0050832 defense response to fungus
biological_process GO:0071395 cellular response to jasmonic acid stimulus
biological_process GO:0098542 defense response to other organism
biological_process GO:0010468 regulation of gene expression
biological_process GO:0000245 spliceosomal complex assembly
biological_process GO:0051171 regulation of nitrogen compound metabolic process
biological_process GO:0080090 regulation of primary metabolic process
biological_process GO:0009617 response to bacterium
biological_process GO:0008150 biological_process
biological_process GO:0031326 regulation of cellular biosynthetic process
cellular_component GO:0005737 cytoplasm
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0005634 nucleus
cellular_component GO:0005829 cytosol
cellular_component GO:0015030 Cajal body
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0030529 intracellular ribonucleoprotein complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0003682 chromatin binding
molecular_function GO:0003729 mRNA binding
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C05G080470.1Cla97C05G080470.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003954RNA recognition motif domain, eukaryoteSMARTSM00361rrm2_1coord: 107..180
e-value: 8.0E-8
score: 42.0
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 187..264
e-value: 1.7E-10
score: 50.9
coord: 282..355
e-value: 1.1E-17
score: 74.8
coord: 107..180
e-value: 1.1E-27
score: 107.9
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 188..254
e-value: 3.7E-9
score: 36.2
coord: 283..352
e-value: 6.5E-16
score: 57.8
coord: 108..178
e-value: 2.1E-21
score: 75.4
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 106..184
score: 20.321
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 281..359
score: 15.869
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 186..268
score: 12.185
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3DG3DSA:3.30.70.330coord: 271..371
e-value: 1.1E-20
score: 75.8
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3DG3DSA:3.30.70.330coord: 5..186
e-value: 7.6E-30
score: 106.0
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3DG3DSA:3.30.70.330coord: 187..267
e-value: 1.9E-19
score: 71.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 448..472
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 436..482
NoneNo IPR availablePANTHERPTHR44308FAMILY NOT NAMEDcoord: 1..482
NoneNo IPR availablePANTHERPTHR44308:SF2RNA RECOGNITION MOTIF-CONTAINING PROTEINcoord: 1..482
NoneNo IPR availableCDDcd00590RRM_SFcoord: 108..180
e-value: 2.96098E-24
score: 95.0645
NoneNo IPR availableCDDcd12251RRM3_hnRNPR_likecoord: 280..359
e-value: 1.32444E-31
score: 115.029
IPR035979RNA-binding domain superfamilySUPERFAMILYSSF54928RNA-binding domain, RBDcoord: 186..361
IPR035979RNA-binding domain superfamilySUPERFAMILYSSF54928RNA-binding domain, RBDcoord: 102..186