CmaCh06G009960 (gene) Cucurbita maxima (Rimu)

NameCmaCh06G009960
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionRNA-binding protein 47
LocationCma_Chr06 : 6734275 .. 6739204 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCCCATCCGCTTGAAAGCCCTCGTCGTTTCAGCCCAGAAGGGGCCTTCGTCTTTCTTCCGCTCACAAAGGCCCGAATCGGAAGAACTCATCTGATAGATTTAACGCAGCTCTGATTCTCCCTTTTCTCTGAGCCTGGAGAGGGAAAAACAAAAAGGAAAAGGAAAAGGAAAAGGAAATCCAACCCAGATTACAGAACCAGAATTCGCTCATAACCATACCCAGATTCCAATTCTTCTAGCCCCTTCAATTATTTACTCTACTGGTATGCCTTACACGACTCGCACTCTAGTTATTCCCCTGTTTTTGCTATTTCAATATCTGTGCTCTTCACTTTTCACTACTATAAAGTGTTCAGATGGGGTTATGATTCGTTTGATTTTCGTTTTTTTTTTTTTTTGTCTCCTTTCCATTTTCAGCTTGAATTTCTTACAGTGTCGTGTTCTTTTCTTTTTGTTTGACACCCTTTTTGGGTTCTTTAGCTGTCTCGGAATGAGCATGTTGACGAGATTTATTCTGCTTATTTGTGTTTATTATGTTTAACATTACATTTTGGTGTGTTTTTGTTTCGATAGGGTTTGGGATTTTGCAATCCCCATTCCTTTCTCGCTTTCTTTTTTGCTATTTGATTCTGTGATTCGTTTATTGGAAAAGTGAGGCGTTTCCTTTGCGTTGTATTCTGTTTGTTCGACTGGCATTTTGGGAGCTATGTCTGATTTATTTTTTTGTTCTTGGGTTTGAAATGAAGCACAGTGGTGGATAGAACATGAGTTAGGCTTATGCTCCGATAGTTTTTGTTTCTTAATTTTGTGAGCTCGTTTGTTTTAGTTTTTAGAATTTCATCATCTTAGAACAAGCACGTGGAATTTTACTTTTAATTTTCTTCAATCTCTTTATCCTTATCTATGAAATCTGGACTCCTATTACTGTTGCTTCTAGATATCTTCAACACTGAACTAAACCCATATGTAGAACTTGAATGTTTTCATTTTACTCGTGTTAATCTTGTTTCATTTTCATTTTAATAGTTTAATCCATATTTAGAACTTGAATGCATTTATTATATTACAGGTGATTTTGATGTTTATGAAGTTTGTTTGTTGACACTATCTGCCACATAGCGCAGTCATGGCAGATGGTTCGGAAGTTGAGGAGCGGGTGGATCTTGAAGAGGACAATTACATGGAAGAGATGGATGATGATGTGGAAGAACATGTAGATGAGGATGGAGTAGATAGGAGGGATGGTGAACGTCCGGAAGAGGACGTTGAAGAAGTTAGTGAAGAGCATCAAGTTGAGACCAACACAGAAGATAACTTTTCAGAAGATGGTAGAAATAACATATCCATAGAGTCTATAGAAAATAGAGATAAGTCTGCTTCTTTGTTAGATGAAGATGATCTTGAGAAGCATGCTCAGCTTCTTGCCCTTCCTCCTCATGGATCTGAAGTTTTTATTGGCGGACTTTCACGCGATGTTTCGGAAGAAGATTTGAGAGATTTGTGTGAATCACTAGGTGAAATATTTGAGGTCTGGAATGGTGTTTATTCTTTCTCGTGCTCTATCTTTCTTTCTATGGGCCTTCGATTTTAGAGGTAAGTTCTTTTGGTAATACAATTGTTTTGCAGATAAGGATAATAAAAGACAGAGATTCTGGTGAAAGCAAGGGTTATGCATTTATATCATTTAAAACCAAAGAGTCAGCACAAAAGGCTATAGAAGAGTTGCATGGTAAAGAAGTTAAGGTAATTGTCGGGACCCTTTAAGACTTTGATGTCCTTATAAGTACTTTACCATGTTTCAGCAGCCAGAGCTGCTCTTTTTCTGATATCCATCACCAAATTTTTTTAATGTAATTCTAGTTTGTCCTTCATACGACAGGGTAAAACGATAAGGTGTTCTCTGTCTGATTCTAAACACAGATTATTTATTGGTAATGTCCCGAAAAGTTGGACAGAAGACGAGTTTAAGAGACTTATAGAAGGAGTTGGCCCTGGAGCTGAAAACATTGAGCTTATTAAGGTGGAGTTGCAAATTTATACATCATCTAGAAATTTATAGTTATTGAGCCCTTATGTTTTTTCTTCTGTATGAACAATTGCAGGATCCTCAGAACCCAAGCCGAAATCGTGGATTTGCATTTGTTTTATATTATAACAATGCCTGTGCTGATTATTCAAGGCAGAAAATGTCGAGCGCGAATTTTAAGCTGGATGGAAATTCCCCAACTGTTAGTTGGGCTGACCCGAAAAGTACACCTGATAACTCTGCTGCTTCTCAGGTAATTGAGTTACCTTTTTGGAGAAAATATATGGGGGGGTCTGTATGGCATTTTTCAAGTACCTTGAAATTTCATATCGACTGGAATTTGGTTAACAAATGTGATAGGTTAAAAGATGAAAGTCGTATATCGTGCAGTTGTGTTTCTTCAATTTCAATAGCTAAATAAGTGATAGCAACCAAAATCTGGCCCACAAAATTATATTGATTGACCAACTGAACATTGGGTTAGGAAATGTGAGTAGGAAGATAGTCATCTTGGTAATTTTTAATTGCCTGGATTTCTCTTTGAGCTAAGTTCAGTTCAAAACCGTCTTAAAGTAGTATTCGGCATCCCACTGGATCTGGCTGCCACTGACAAACTTCAACAAATTCTAAATGACCCCATGGCTAATGCTACAAGGGCATGGTTGGGAGTGATTTTGAAATGGTTAAAATTACTTTTATTGTATTCAAAATCATTTTAAAACATGTTTTTAATGATTCAAAATCAATTTTTATAAATTACTTTTATTGTATTCAAAATCATTTTAAAACATGTTTTTAATGATTCAAAATCAATTTTTATGGTATGAAAATTGTGTTTAAAAGTGTAGAATCAATCATTAAGTGGATTTTGAATAATTAATAGCATGTTTTCGTGTGTAACATGGCAAAAGTGATTTTAACCCTTTCAAAACCACTCCCAAACACGTTTCATGCAATCTCCAGGAAATTTGTCTTCTGGAACAATCTCTACCTAACAATATGTCAGCATCTTGGTGAACGAGTGAGCATTCAGCACAATACTTGACTATTAAAGTAGCTTCATGTTTCCAATTGTTTCCATCCCTCGAACCTTTTAACTAACCGTGATCAGCTCTCTTTATGACTGTGTATTAGATGTACTTGAAGGAATTGAAATATAATTTGAAATACAATATAGTTTTCAAATTCACAGGAAGATATTTAAAAAAGCATGGTAGTTCGAATACTACATTGGTGATGATGAAAGCTATAAAGACTTGTTTAGTTTCGACATTGACTGCCTGTTTTCTATGTTCCATTGGTGATGATGAAAGCTATAAAGACTTGTTTAGTTTCGACATTGACTGCCTGTTTTCTATGTTCGTGCTAGTAAGTTTTCATAGTTCTATTACATTGCGGTTCGCAGGTGAAGGCTCTTTATGTGAAAAACATACCTGAGAATACTACTACTGAGCAATTGAAAGAACTGTTTCAGCAGCATGGGGATGTGACAAAAGTGAATATGCCACCTGGGAAAGCTGGGCATAGTAAACGGGATTTTGCATTCATCCATTATGCTGAGAGGTCAAGTGCACTGAAGGCTGTAAAAGAGACAGAGAAATATGAAATTGAAGGTTTTATTTCTATATCCTCTGAGATTTACATTCGAAATCTGAAATGTACAATCATATCTGCTTTTATTTACAGTGAAACGTTAAAAATATTTCGGGATTGTGTTTGTGTTCCTTGATGATAAGAGTGAATTCAAAAATGATTTGTTCGACTTCTTTTGACTGAAATAATAATCTTCTGAGATCTGCATTTCAAAATAGTAATAATAATAATCTTCTGAGATCTGCATTTCAAAATAGTAATAATAATAATCTTCTGAGATTTTTTTATGCAGGCCAAGTGTTGGAGGTTGTCCTTGCAAAGCCTCAAAGTGATAAAAAGCCAGATGGAGCCTATTCCCATATATCTGGAAGTCATTCAAACCATCTTCTTCATGCTGGATACGGTAGTTATGGCGGAAGTCCATACGGTTCCTTAGGTGGGTATGGTGTTACTGCAGGCTTGCATCAGGTAATCTGCTCGTTTATCACCCGAAGCAAAAGAAATGAAATGAAAAAAGACTTTGGCCACATTAATCTCATGGATTTTCTTGCATGAACAGCCAATGATTTATGGTAGGGGGCCAATGCCTGCTGGAATGCAGATGGTACCAATGGTTTTACCGGATGGTCGAATTGGTTATGTCCTGTAAGATCTCACAACTCTTACTCGAATCAAAATCCATTTTTATATGACTATATAAGATAGTAAATTCTATGTATGATTACTTGGGAATGCAGTCAGCAACCTGGAGTACCGATGCCACCTTCTCGGTCTAGAAGAAGTGAGCGGAGCAGTGGCTCAGGTGGACCGACGAGTCGATCGGGAGGTAGCAGCAGTGGCGATGAAGTCAACCGTGGGAGAAGGTATCGGCCGTATTAACGGTAAAAGAGCTGAAAAGGATTGTGTGACTGGAGATTAGAAGGCTAAATCACAGGAAATAACAAAAATCCCCACTCAGAAAAAGAATGTAAAAGAAACCGAACAAGATGAGAGAAAGAACAGAGAGGTTTTTGCTATTATGGCACTTCTTATTTAGCTCAGAGTTGAACAAAGAGAATTGTGTGTACCATAAGCAATATGCAGTTCAAAGTTTTACTCAGTTTTAGAATCTCCTGTTCTTTCTCCCATTTTTTTTATGTCCTTTTGAAGGTGAAAGTCTGTGTAATCACTGGTAAAGGATAACTTCATTGTTCTTCATCTCTTTTTCTGAGAAGATTCTTTCTGTTCCTTTTCCCCGTTCAATTCGAATCTCTCACTTTTTAGTCGAAACTCGAAGGGTATACTGCCTGGTTGGTACGAATTTGCTATGA

mRNA sequence

AGCCCATCCGCTTGAAAGCCCTCGTCGTTTCAGCCCAGAAGGGGCCTTCGTCTTTCTTCCGCTCACAAAGGCCCGAATCGGAAGAACTCATCTGATAGATTTAACGCAGCTCTGATTCTCCCTTTTCTCTGAGCCTGGAGAGGGAAAAACAAAAAGGAAAAGGAAAAGGAAAAGGAAATCCAACCCAGATTACAGAACCAGAATTCGCTCATAACCATACCCAGATTCCAATTCTTCTAGCCCCTTCAATTATTTACTCTACTGGTGATTTTGATGTTTATGAAGTTTGTTTGTTGACACTATCTGCCACATAGCGCAGTCATGGCAGATGGTTCGGAAGTTGAGGAGCGGGTGGATCTTGAAGAGGACAATTACATGGAAGAGATGGATGATGATGTGGAAGAACATGTAGATGAGGATGGAGTAGATAGGAGGGATGGTGAACGTCCGGAAGAGGACGTTGAAGAAGTTAGTGAAGAGCATCAAGTTGAGACCAACACAGAAGATAACTTTTCAGAAGATGGTAGAAATAACATATCCATAGAGTCTATAGAAAATAGAGATAAGTCTGCTTCTTTGTTAGATGAAGATGATCTTGAGAAGCATGCTCAGCTTCTTGCCCTTCCTCCTCATGGATCTGAAGTTTTTATTGGCGGACTTTCACGCGATGTTTCGGAAGAAGATTTGAGAGATTTGTGTGAATCACTAGGTGAAATATTTGAGATAAGGATAATAAAAGACAGAGATTCTGGTGAAAGCAAGGGTTATGCATTTATATCATTTAAAACCAAAGAGTCAGCACAAAAGGCTATAGAAGAGTTGCATGGTAAAGAAGTTAAGGGTAAAACGATAAGGTGTTCTCTGTCTGATTCTAAACACAGATTATTTATTGGTAATGTCCCGAAAAGTTGGACAGAAGACGAGTTTAAGAGACTTATAGAAGGAGTTGGCCCTGGAGCTGAAAACATTGAGCTTATTAAGGATCCTCAGAACCCAAGCCGAAATCGTGGATTTGCATTTGTTTTATATTATAACAATGCCTGTGCTGATTATTCAAGGCAGAAAATGTCGAGCGCGAATTTTAAGCTGGATGGAAATTCCCCAACTGTTAGTTGGGCTGACCCGAAAAGTACACCTGATAACTCTGCTGCTTCTCAGGTGAAGGCTCTTTATGTGAAAAACATACCTGAGAATACTACTACTGAGCAATTGAAAGAACTGTTTCAGCAGCATGGGGATGTGACAAAAGTGAATATGCCACCTGGGAAAGCTGGGCATAGTAAACGGGATTTTGCATTCATCCATTATGCTGAGAGGTCAAGTGCACTGAAGGCTGTAAAAGAGACAGAGAAATATGAAATTGAAGGCCAAGTGTTGGAGGTTGTCCTTGCAAAGCCTCAAAGTGATAAAAAGCCAGATGGAGCCTATTCCCATATATCTGGAAGTCATTCAAACCATCTTCTTCATGCTGGATACGGTAGTTATGGCGGAAGTCCATACGGTTCCTTAGGTGGGTATGGTGTTACTGCAGGCTTGCATCAGCCAATGATTTATGGTAGGGGGCCAATGCCTGCTGGAATGCAGATGGTACCAATGGTTTTACCGGATGGTCGAATTGGTTATGTCCTTCAGCAACCTGGAGTACCGATGCCACCTTCTCGGTCTAGAAGAAGTGAGCGGAGCAGTGGCTCAGGTGGACCGACGAGTCGATCGGGAGGTAGCAGCAGTGGCGATGAAGTCAACCGTGGGAGAAGGTATCGGCCGTATTAACGGTAAAAGAGCTGAAAAGGATTGTGTGACTGGAGATTAGAAGGCTAAATCACAGGAAATAACAAAAATCCCCACTCAGAAAAAGAATGTAAAAGAAACCGAACAAGATGAGAGAAAGAACAGAGAGGTTTTTGCTATTATGGCACTTCTTATTTAGCTCAGAGTTGAACAAAGAGAATTGTGTGTACCATAAGCAATATGCAGTTCAAAGTTTTACTCAGTTTTAGAATCTCCTGTTCTTTCTCCCATTTTTTTTATGTCCTTTTGAAGGTGAAAGTCTGTGTAATCACTGGTAAAGGATAACTTCATTGTTCTTCATCTCTTTTTCTGAGAAGATTCTTTCTGTTCCTTTTCCCCGTTCAATTCGAATCTCTCACTTTTTAGTCGAAACTCGAAGGGTATACTGCCTGGTTGGTACGAATTTGCTATGA

Coding sequence (CDS)

ATGGCAGATGGTTCGGAAGTTGAGGAGCGGGTGGATCTTGAAGAGGACAATTACATGGAAGAGATGGATGATGATGTGGAAGAACATGTAGATGAGGATGGAGTAGATAGGAGGGATGGTGAACGTCCGGAAGAGGACGTTGAAGAAGTTAGTGAAGAGCATCAAGTTGAGACCAACACAGAAGATAACTTTTCAGAAGATGGTAGAAATAACATATCCATAGAGTCTATAGAAAATAGAGATAAGTCTGCTTCTTTGTTAGATGAAGATGATCTTGAGAAGCATGCTCAGCTTCTTGCCCTTCCTCCTCATGGATCTGAAGTTTTTATTGGCGGACTTTCACGCGATGTTTCGGAAGAAGATTTGAGAGATTTGTGTGAATCACTAGGTGAAATATTTGAGATAAGGATAATAAAAGACAGAGATTCTGGTGAAAGCAAGGGTTATGCATTTATATCATTTAAAACCAAAGAGTCAGCACAAAAGGCTATAGAAGAGTTGCATGGTAAAGAAGTTAAGGGTAAAACGATAAGGTGTTCTCTGTCTGATTCTAAACACAGATTATTTATTGGTAATGTCCCGAAAAGTTGGACAGAAGACGAGTTTAAGAGACTTATAGAAGGAGTTGGCCCTGGAGCTGAAAACATTGAGCTTATTAAGGATCCTCAGAACCCAAGCCGAAATCGTGGATTTGCATTTGTTTTATATTATAACAATGCCTGTGCTGATTATTCAAGGCAGAAAATGTCGAGCGCGAATTTTAAGCTGGATGGAAATTCCCCAACTGTTAGTTGGGCTGACCCGAAAAGTACACCTGATAACTCTGCTGCTTCTCAGGTGAAGGCTCTTTATGTGAAAAACATACCTGAGAATACTACTACTGAGCAATTGAAAGAACTGTTTCAGCAGCATGGGGATGTGACAAAAGTGAATATGCCACCTGGGAAAGCTGGGCATAGTAAACGGGATTTTGCATTCATCCATTATGCTGAGAGGTCAAGTGCACTGAAGGCTGTAAAAGAGACAGAGAAATATGAAATTGAAGGCCAAGTGTTGGAGGTTGTCCTTGCAAAGCCTCAAAGTGATAAAAAGCCAGATGGAGCCTATTCCCATATATCTGGAAGTCATTCAAACCATCTTCTTCATGCTGGATACGGTAGTTATGGCGGAAGTCCATACGGTTCCTTAGGTGGGTATGGTGTTACTGCAGGCTTGCATCAGCCAATGATTTATGGTAGGGGGCCAATGCCTGCTGGAATGCAGATGGTACCAATGGTTTTACCGGATGGTCGAATTGGTTATGTCCTTCAGCAACCTGGAGTACCGATGCCACCTTCTCGGTCTAGAAGAAGTGAGCGGAGCAGTGGCTCAGGTGGACCGACGAGTCGATCGGGAGGTAGCAGCAGTGGCGATGAAGTCAACCGTGGGAGAAGGTATCGGCCGTATTAA

Protein sequence

MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNTEDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIRCSLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKELFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQSDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYRPY
BLAST of CmaCh06G009960 vs. Swiss-Prot
Match: HNRPQ_HUMAN (Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens GN=SYNCRIP PE=1 SV=2)

HSP 1 Score: 179.9 bits (455), Expect = 6.8e-44
Identity = 107/321 (33.33%), Postives = 179/321 (55.76%), Query Frame = 1

Query: 102 PPHGSEVFIGGLSRDVSEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQ 161
           P  G+E+F+G + RD+ E++L  L E  G I+++R++ D  +G ++GYAF++F TKE+AQ
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217

Query: 162 KAIEELHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIK 221
           +A++  +  E++ GK I   +S + +RLF+G++PKS T+++       V  G  ++ L  
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277

Query: 222 DPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQV 281
            P +  +NRGF F+ Y ++  A  +R+++ S   K+ GN  TV WADP   PD    ++V
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337

Query: 282 KALYVKNIPENTTTEQLKELFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVK 341
           K L+V+N+    T E L++ F Q G + +V           +D+AFIH+ ER  A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKAFSQFGKLERVK--------KLKDYAFIHFDERDGAVKAME 397

Query: 342 ETEKYEIEGQVLEVVLAKPQSDKKPDGAYSHISGSHSNHLLHAGYGSYG---------GS 401
           E    ++EG+ +E+V AKP   K+ +      +  +    ++  Y  YG         G 
Sbjct: 398 EMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAAKNQ---MYDDYYYYGPPHMPPPTRGR 457

Query: 402 PYGSLGGYGVTAGLHQPMIYG 413
             G  GGYG     + P  YG
Sbjct: 458 GRGGRGGYG-----YPPDYYG 462

BLAST of CmaCh06G009960 vs. Swiss-Prot
Match: HNRPQ_MOUSE (Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus GN=Syncrip PE=1 SV=2)

HSP 1 Score: 179.5 bits (454), Expect = 8.8e-44
Identity = 107/321 (33.33%), Postives = 179/321 (55.76%), Query Frame = 1

Query: 102 PPHGSEVFIGGLSRDVSEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQ 161
           P  G+E+F+G + RD+ E++L  L E  G I+++R++ D  +G ++GYAF++F TKE+AQ
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217

Query: 162 KAIEELHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIK 221
           +A++  +  E++ GK I   +S + +RLF+G++PKS T+++       V  G  ++ L  
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277

Query: 222 DPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQV 281
            P +  +NRGF F+ Y ++  A  +R+++ S   K+ GN  TV WADP   PD    ++V
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337

Query: 282 KALYVKNIPENTTTEQLKELFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVK 341
           K L+V+N+    T E L++ F Q G + +V           +D+AFIH+ ER  A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKSFSQFGKLERVK--------KLKDYAFIHFDERDGAVKAME 397

Query: 342 ETEKYEIEGQVLEVVLAKPQSDKKPDGAYSHISGSHSNHLLHAGYGSYG---------GS 401
           E    ++EG+ +E+V AKP   K+ +      +  +    ++  Y  YG         G 
Sbjct: 398 EMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAAKNQ---MYDDYYYYGPPHMPPPTRGR 457

Query: 402 PYGSLGGYGVTAGLHQPMIYG 413
             G  GGYG     + P  YG
Sbjct: 458 GRGGRGGYG-----YPPDYYG 462

BLAST of CmaCh06G009960 vs. Swiss-Prot
Match: HNRPQ_RAT (Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus GN=Syncrip PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 8.8e-44
Identity = 107/321 (33.33%), Postives = 179/321 (55.76%), Query Frame = 1

Query: 102 PPHGSEVFIGGLSRDVSEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQ 161
           P  G+E+F+G + RD+ E++L  L E  G I+++R++ D  +G ++GYAF++F TKE+AQ
Sbjct: 68  PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 127

Query: 162 KAIEELHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIK 221
           +A++  +  E++ GK I   +S + +RLF+G++PKS T+++       V  G  ++ L  
Sbjct: 128 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 187

Query: 222 DPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQV 281
            P +  +NRGF F+ Y ++  A  +R+++ S   K+ GN  TV WADP   PD    ++V
Sbjct: 188 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 247

Query: 282 KALYVKNIPENTTTEQLKELFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVK 341
           K L+V+N+    T E L++ F Q G + +V           +D+AFIH+ ER  A+KA++
Sbjct: 248 KVLFVRNLANTVTEEILEKSFSQFGKLERVK--------KLKDYAFIHFDERDGAVKAME 307

Query: 342 ETEKYEIEGQVLEVVLAKPQSDKKPDGAYSHISGSHSNHLLHAGYGSYG---------GS 401
           E    ++EG+ +E+V AKP   K+ +      +  +    ++  Y  YG         G 
Sbjct: 308 EMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAAKNQ---MYDDYYYYGPPHMPPPTRGR 367

Query: 402 PYGSLGGYGVTAGLHQPMIYG 413
             G  GGYG     + P  YG
Sbjct: 368 GRGGRGGYG-----YPPDYYG 372

BLAST of CmaCh06G009960 vs. Swiss-Prot
Match: HNRPR_HUMAN (Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens GN=HNRNPR PE=1 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.7e-39
Identity = 128/417 (30.70%), Postives = 205/417 (49.16%), Query Frame = 1

Query: 102 PPHGSEVFIGGLSRDVSEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQ 161
           P  G+EVF+G + RD+ E++L  L E  G I+++R++ D  SG+++GYAFI+F  KE+AQ
Sbjct: 161 PGIGTEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQ 220

Query: 162 KAIEELHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIK 221
           +A++     E++ GK +   +S + +RLF+G++PK+ T++        V  G  ++ L  
Sbjct: 221 EAVKLCDSYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYH 280

Query: 222 DPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQV 281
            P +  +NRGF F+ Y ++  A  +R+++ S   K+ GN  TV WADP   PD    ++V
Sbjct: 281 QPDDKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKV 340

Query: 282 KALYVKNIPENTTTEQLKELFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVK 341
           K L+V+N+    T E L++ F + G + +V           +D+AF+H+ +R +A+KA+ 
Sbjct: 341 KVLFVRNLATTVTEEILEKSFSEFGKLERVK--------KLKDYAFVHFEDRGAAVKAMD 400

Query: 342 ETEKYEIEGQVLEVVLAKPQSDKKPD---GAYSHISGSHSNHLLH---------AGYGSY 401
           E    EIEG+ +E+VLAKP   K+ +      +  S ++ ++  H          G G  
Sbjct: 401 EMNGKEIEGEEIEIVLAKPPDKKRKERQAARQASRSTAYEDYYYHPPPRMPPPIRGRGRG 460

Query: 402 GGSPYGSLGGYGVTAGLHQPMIYG------------RGPMPAGMQMVPMVLPD------- 461
           GG      GGYG     + P  YG                  G +       D       
Sbjct: 461 GGR-----GGYG-----YPPDYYGYEDYYDDYYGYDYHDYRGGYEDPYYGYDDGYAVRGR 520

Query: 462 --GRIGYVLQQP----GVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 481
             GR G     P    G P P  R+  S+R +  G P    GG     +  RGR  R
Sbjct: 521 GGGRGGRGAPPPPRGRGAPPPRGRAGYSQRGAPLGPPRGSRGGRGGPAQQQRGRGSR 559

BLAST of CmaCh06G009960 vs. Swiss-Prot
Match: RBM46_DANRE (Probable RNA-binding protein 46 OS=Danio rerio GN=rbm46 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 5.5e-38
Identity = 104/295 (35.25%), Postives = 162/295 (54.92%), Query Frame = 1

Query: 102 PPHGSEVFIGGLSRDVSEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQ 161
           PP G EVF+G + RD+ E++L  + E  G I+E R++ +  SGE++GYAF+ + T+E AQ
Sbjct: 41  PPRGREVFVGKIPRDMYEDELVPVFEQAGHIYEFRLMMEF-SGENRGYAFVMYTTREKAQ 100

Query: 162 KAIEELHGKEVK-GKTIRCSLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIK 221
           +AI+ L   E++ GK I   +S    RLFIG++PK   ++E +  +  V  G  ++ +  
Sbjct: 101 RAIQLLDNYEIRPGKFIGVCVSLDNCRLFIGSIPKDKKKEEIQEEMMKVTEGVMDVIVYP 160

Query: 222 DPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQV 281
              +  +NRGFAFV Y ++  A  +R+K+    F+L G++  V WA+P+   D     +V
Sbjct: 161 SAVDRMKNRGFAFVEYESHKAAAMARRKLIPGTFQLWGHTIQVDWAEPEKELDEETMQRV 220

Query: 282 KALYVKNIPENTTTEQLKELFQQHGDVTKVNMPPGKAGHSKR--DFAFIHYAERSSALKA 341
           + LYV+N+  +TT E L+  F Q        + PG     K+  D+AFIH+  R  AL A
Sbjct: 221 RVLYVRNLMLSTTEETLRSEFSQ--------LKPGSVERVKKLTDYAFIHFYNREDALTA 280

Query: 342 VKETEKYEIEGQVLEVVLAKPQSDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPY 394
           ++      I+G  +EV LAKP S    DG  +   G  + H      G YG S +
Sbjct: 281 LESMNGKVIDGSPIEVTLAKPAS---KDG--NKRFGPRNCHNGVTAAGGYGDSNF 321

BLAST of CmaCh06G009960 vs. TrEMBL
Match: V7AZJ8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G257300g PE=4 SV=1)

HSP 1 Score: 673.7 bits (1737), Expect = 1.7e-190
Identity = 349/491 (71.08%), Postives = 412/491 (83.91%), Query Frame = 1

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSE--EHQVET 60
           M++G+E++ERVDL+E+N+MEEMDDDVEE +D+DGVD  + E  E  VEE  E  +   E 
Sbjct: 1   MSEGAEIDERVDLDEENFMEEMDDDVEEQIDDDGVDGGEDENAEGSVEEHDEYEDSTAEV 60

Query: 61  NTEDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVS 120
             +D+  E  +++I+ E  ++ D+  S +DED+ EKH +LLALPPHGSEVFIGGL RDV 
Sbjct: 61  GGKDHLPEAEKSDIATEFGDD-DQKPSFIDEDEKEKHDELLALPPHGSEVFIGGLPRDVC 120

Query: 121 EEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIR 180
           E+DLRDLCE +G+I E+R++KDRD+GE+KGYAF++FKTKE AQKAIEE+H +E KGKT+R
Sbjct: 121 EDDLRDLCEPVGDILEVRLMKDRDTGENKGYAFVAFKTKEVAQKAIEEIHSREFKGKTLR 180

Query: 181 CSLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYN 240
           CSLS++KHRLFIGNVPK+WTED+F+++IEGVGPG ENIELIKDPQNPSRNRGFAFVLYYN
Sbjct: 181 CSLSETKHRLFIGNVPKTWTEDDFRKVIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYN 240

Query: 241 NACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLK 300
           NACADYSRQKMSSA+FKLDGN+PTV+WADPK++PD+SA+SQVKALYVKNIPEN TT+QLK
Sbjct: 241 NACADYSRQKMSSASFKLDGNTPTVTWADPKNSPDHSASSQVKALYVKNIPENVTTDQLK 300

Query: 301 ELFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAK 360
           ELF++HG+VTKV MPPGKAG  KRDF FIHYAERSSALKAVKETEKYEI+GQ+LEVVLAK
Sbjct: 301 ELFRRHGEVTKVVMPPGKAG-GKRDFGFIHYAERSSALKAVKETEKYEIDGQLLEVVLAK 360

Query: 361 PQSDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSLG-GYGVTAGLHQPMIYGRGPMP 420
           PQ+DKKPDG Y +  G HSNHL H  YG++ G+PYGSLG GYGV  G  QPMIYGRGPMP
Sbjct: 361 PQADKKPDGGYGYNPGLHSNHLPHPAYGNFSGNPYGSLGAGYGVGGGYQQPMIYGRGPMP 420

Query: 421 AGMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSG------D 480
           AGMQMVPMVLPDGRIGYVLQQPGV  PPSR RR ERS+G  G   R GG   G      D
Sbjct: 421 AGMQMVPMVLPDGRIGYVLQQPGVQAPPSRPRRIERSNGPSGQPGRGGGGGGGGGGSGND 480

Query: 481 EVNRGRRYRPY 483
           E NR RRYRPY
Sbjct: 481 EGNRSRRYRPY 489

BLAST of CmaCh06G009960 vs. TrEMBL
Match: I1JS33_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_03G260500 PE=4 SV=1)

HSP 1 Score: 670.6 bits (1729), Expect = 1.4e-189
Identity = 343/485 (70.72%), Postives = 413/485 (85.15%), Query Frame = 1

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVS-EEHQVETN 60
           M++G+E++ERVDL+E+NYMEEMDDDVEE +D+DGVD  + E  E  VEE   E+   E  
Sbjct: 1   MSEGAEIDERVDLDEENYMEEMDDDVEEQIDDDGVDGGEDENAEGSVEEHEYEDSAAEAG 60

Query: 61  TEDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSE 120
            +D   E  +++I+ E  ++  K  S +DED+ EKH +LLALPPHGSEVFIGGL RDV E
Sbjct: 61  GKDQLPEAEKSDIATEFGDDEQK-LSFIDEDEKEKHDELLALPPHGSEVFIGGLPRDVCE 120

Query: 121 EDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIRC 180
           +DLR+LCE +G+I E+R++KDRD+GE KGYAF++FKTKE AQKAIEE+H KE KGKT+RC
Sbjct: 121 DDLRELCEPMGDILEVRLMKDRDTGEHKGYAFVAFKTKEVAQKAIEEIHSKEFKGKTLRC 180

Query: 181 SLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNN 240
           SLS++KHRLFIGNVPK+WTED+F++++EGVGPG E IELIKDPQNPSRNRGFAFVLYYNN
Sbjct: 181 SLSETKHRLFIGNVPKTWTEDDFRKVVEGVGPGVETIELIKDPQNPSRNRGFAFVLYYNN 240

Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKE 300
           ACADYSRQKM+S++FKLDGN+PTV+WADPK++PD+SA+SQVKALYVKNIPEN TTEQLKE
Sbjct: 241 ACADYSRQKMASSSFKLDGNTPTVTWADPKNSPDHSASSQVKALYVKNIPENVTTEQLKE 300

Query: 301 LFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKP 360
           LF++HG+VTKV MPPGKAG  KRDF FIHYAERSSALKAVK+TEKYEI+GQ+LEVVLAKP
Sbjct: 301 LFRRHGEVTKVVMPPGKAG-GKRDFGFIHYAERSSALKAVKDTEKYEIDGQMLEVVLAKP 360

Query: 361 QSDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSLG-GYGVTAGLHQPMIYGRGPMPA 420
           Q+DKKPDG Y++  G H NH+ H  YG++ G+PYGSLG GYGV AG  QPMIYGRGPMPA
Sbjct: 361 QADKKPDGGYAYNPGLHPNHVPHPAYGNFSGNPYGSLGAGYGVAAGYQQPMIYGRGPMPA 420

Query: 421 GMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSG-DEVNRGR 480
           GMQMVPM+LPDGRIGYVLQQPGV +PP+R RR++RS+G  G   R GG +SG DE NR R
Sbjct: 421 GMQMVPMMLPDGRIGYVLQQPGVQVPPARPRRNDRSNGPSGQPGRGGGGASGNDEGNRSR 480

Query: 481 RYRPY 483
           RYRPY
Sbjct: 481 RYRPY 483

BLAST of CmaCh06G009960 vs. TrEMBL
Match: A0A0L9TFD4_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan635s006200 PE=4 SV=1)

HSP 1 Score: 667.5 bits (1721), Expect = 1.2e-188
Identity = 343/484 (70.87%), Postives = 409/484 (84.50%), Query Frame = 1

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVS-EEHQVETN 60
           M++G+E++ERVDL+E+N+MEE+DDDVEE +D+DGVD  + E  E  VEE   E+   +  
Sbjct: 1   MSEGAEIDERVDLDEENFMEEIDDDVEEQIDDDGVDGGEDENAEGSVEEHEYEDSTADVG 60

Query: 61  TEDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSE 120
            +D   E  +++I+ E   + D+  S +DED+ EKH +LLALPPHGSEVFIGGL RDV E
Sbjct: 61  EKDQLPEAEKSDIATE-FGDDDQKPSFIDEDEKEKHNELLALPPHGSEVFIGGLPRDVCE 120

Query: 121 EDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIRC 180
           +DLRDLCE +G+I E+R++KDRD+GE+KGYAF++FKTKE AQKAIEE+H +E KGKT+RC
Sbjct: 121 DDLRDLCEPMGDILEVRLMKDRDTGENKGYAFVAFKTKEVAQKAIEEIHSREFKGKTLRC 180

Query: 181 SLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNN 240
           SLS++KHRLFIGNVPK+WTED+F+++IEGVGPG ENIELIKDPQNPSRNRGFAFVLYYNN
Sbjct: 181 SLSETKHRLFIGNVPKTWTEDDFRKVIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNN 240

Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKE 300
           ACADYSRQKMS+A+FKLDGN+PTV+WADPK++PD+SA+SQVKALYVKNIPEN TTEQLKE
Sbjct: 241 ACADYSRQKMSNASFKLDGNTPTVTWADPKNSPDHSASSQVKALYVKNIPENVTTEQLKE 300

Query: 301 LFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKP 360
           LF++HG+VTKV MPPGKAG  KRDF FIHYAERSSALKAVK+TEKYEI+GQVLEVVLAKP
Sbjct: 301 LFRRHGEVTKVVMPPGKAG-GKRDFGFIHYAERSSALKAVKDTEKYEIDGQVLEVVLAKP 360

Query: 361 QSDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSLG-GYGVTAGLHQPMIYGRGPMPA 420
           Q+DKKPDG Y +  G H +HL H  YG++ G+PYGSLG GYGV  G  QPMIYGRGPMPA
Sbjct: 361 QADKKPDGGYGYNPGLHPSHLPHPAYGNFSGNPYGSLGAGYGVGGGYQQPMIYGRGPMPA 420

Query: 421 GMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRR 480
           GMQMVPMVLPDGRIGYVLQQPGV  PPSR RR++RS+G  G   R  G S  DE NR RR
Sbjct: 421 GMQMVPMVLPDGRIGYVLQQPGVQAPPSRPRRTDRSNGPSGQPGR--GGSGNDEGNRSRR 480

Query: 481 YRPY 483
           YRPY
Sbjct: 481 YRPY 480

BLAST of CmaCh06G009960 vs. TrEMBL
Match: A0A0S3RI95_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G335800 PE=4 SV=1)

HSP 1 Score: 667.5 bits (1721), Expect = 1.2e-188
Identity = 343/484 (70.87%), Postives = 409/484 (84.50%), Query Frame = 1

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVS-EEHQVETN 60
           M++G+E++ERVDL+E+N+MEE+DDDVEE +D+DGVD  + E  E  VEE   E+   +  
Sbjct: 1   MSEGAEIDERVDLDEENFMEEIDDDVEEQIDDDGVDGGEDENAEGSVEEHEYEDSTADVG 60

Query: 61  TEDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSE 120
            +D   E  +++I+ E   + D+  S +DED+ EKH +LLALPPHGSEVFIGGL RDV E
Sbjct: 61  EKDQLPEAEKSDIATE-FGDDDQKPSFIDEDEKEKHNELLALPPHGSEVFIGGLPRDVCE 120

Query: 121 EDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIRC 180
           +DLRDLCE +G+I E+R++KDRD+GE+KGYAF++FKTKE AQKAIEE+H +E KGKT+RC
Sbjct: 121 DDLRDLCEPMGDILEVRLMKDRDTGENKGYAFVAFKTKEVAQKAIEEIHSREFKGKTLRC 180

Query: 181 SLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNN 240
           SLS++KHRLFIGNVPK+WTED+F+++IEGVGPG ENIELIKDPQNPSRNRGFAFVLYYNN
Sbjct: 181 SLSETKHRLFIGNVPKTWTEDDFRKVIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNN 240

Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKE 300
           ACADYSRQKMS+A+FKLDGN+PTV+WADPK++PD+SA+SQVKALYVKNIPEN TTEQLKE
Sbjct: 241 ACADYSRQKMSNASFKLDGNTPTVTWADPKNSPDHSASSQVKALYVKNIPENVTTEQLKE 300

Query: 301 LFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKP 360
           LF++HG+VTKV MPPGKAG  KRDF FIHYAERSSALKAVK+TEKYEI+GQVLEVVLAKP
Sbjct: 301 LFRRHGEVTKVVMPPGKAG-GKRDFGFIHYAERSSALKAVKDTEKYEIDGQVLEVVLAKP 360

Query: 361 QSDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSLG-GYGVTAGLHQPMIYGRGPMPA 420
           Q+DKKPDG Y +  G H +HL H  YG++ G+PYGSLG GYGV  G  QPMIYGRGPMPA
Sbjct: 361 QADKKPDGGYGYNPGLHPSHLPHPAYGNFSGNPYGSLGAGYGVGGGYQQPMIYGRGPMPA 420

Query: 421 GMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRR 480
           GMQMVPMVLPDGRIGYVLQQPGV  PPSR RR++RS+G  G   R  G S  DE NR RR
Sbjct: 421 GMQMVPMVLPDGRIGYVLQQPGVQAPPSRPRRTDRSNGPSGQPGR--GGSGNDEGNRSRR 480

Query: 481 YRPY 483
           YRPY
Sbjct: 481 YRPY 480

BLAST of CmaCh06G009960 vs. TrEMBL
Match: I1NCQ2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G259200 PE=4 SV=1)

HSP 1 Score: 665.6 bits (1716), Expect = 4.5e-188
Identity = 342/485 (70.52%), Postives = 410/485 (84.54%), Query Frame = 1

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVS-EEHQVETN 60
           M++G+E++ERVDL+E+NYMEEMDDDVEE +D+DGVD  + E  E   EE   E+   E  
Sbjct: 1   MSEGAEIDERVDLDEENYMEEMDDDVEEQIDDDGVDGVEEENAEGSFEEDEYEDSAAEAG 60

Query: 61  TEDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSE 120
            +D   E  +++I+ E  ++  K  S +DED+ EKH +LLALPPHGSEVFIGGL RDV E
Sbjct: 61  GKDQLPEAEKSDIATEFGDDEQK-LSFIDEDEKEKHDELLALPPHGSEVFIGGLPRDVCE 120

Query: 121 EDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIRC 180
           +DLR+LCE +G+I E+R++KDRD+GE+KGYAF++FKTKE AQKAIEE+H KE KGKT+RC
Sbjct: 121 DDLRELCEPMGDILEVRLMKDRDTGENKGYAFVAFKTKEVAQKAIEEIHSKEFKGKTLRC 180

Query: 181 SLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNN 240
           SLS++KHRLFIGNVPK+WTED+F++++EGVGPG E IELIKDPQNPSRNRGFAFVLYYNN
Sbjct: 181 SLSETKHRLFIGNVPKTWTEDDFRKVVEGVGPGVETIELIKDPQNPSRNRGFAFVLYYNN 240

Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKE 300
           ACADYSRQKM+S++FKLDGN+PTV+WADPK++PD+SA+SQVKALYVKNIPEN TTEQLKE
Sbjct: 241 ACADYSRQKMASSSFKLDGNTPTVTWADPKNSPDHSASSQVKALYVKNIPENVTTEQLKE 300

Query: 301 LFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKP 360
           LF++HG+VTKV MPPGKAG  KRDF FIHYAERSSALKAVK+TEKYEI+GQ+LEVVLAKP
Sbjct: 301 LFRRHGEVTKVVMPPGKAG-GKRDFGFIHYAERSSALKAVKDTEKYEIDGQMLEVVLAKP 360

Query: 361 QSDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSLG-GYGVTAGLHQPMIYGRGPMPA 420
           Q+DKKPDG Y++  G H NH+ H  YG++ G+PYGSLG GYGV AG  QPMIYGRGPMPA
Sbjct: 361 QADKKPDGGYAYNPGLHPNHIPHPAYGNFSGNPYGSLGAGYGVAAGYQQPMIYGRGPMPA 420

Query: 421 GMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSG-DEVNRGR 480
           GMQMVPMVLPDGRIGYVLQQPGV +P +R RR +RS+G  G   R GG  SG DE NR R
Sbjct: 421 GMQMVPMVLPDGRIGYVLQQPGVQVPATRPRRIDRSNGPSGQPGRGGGGGSGNDEGNRSR 480

Query: 481 RYRPY 483
           RYRPY
Sbjct: 481 RYRPY 483

BLAST of CmaCh06G009960 vs. TAIR10
Match: AT4G00830.1 (AT4G00830.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 568.9 bits (1465), Expect = 2.9e-162
Identity = 305/499 (61.12%), Postives = 390/499 (78.16%), Query Frame = 1

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDV-EEVSEEHQVET- 60
           M+D  + ++RVD EE +Y  EM+D+VEE   E+  +  + +  ++DV  + +EE +VE  
Sbjct: 1   MSDARDNDDRVDFEEGSY-SEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDY 60

Query: 61  ---------NTEDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVF 120
                    + ++  +ED  N+I IE+ ++ +K  S +D++D EK++ LL+LPPHGSEVF
Sbjct: 61  GDTKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVF 120

Query: 121 IGGLSRDVSEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHG 180
           IGGL RDV EEDLRDLCE +GEIFE+R++KDRDSG+SKGYAF++FKTK+ AQKAIEELH 
Sbjct: 121 IGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHS 180

Query: 181 KEVKGKTIRCSLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNR 240
           KE KGKTIRCSLS++K+RLFIGN+PK+WTEDEF+++IE VGPG ENIELIKDP N +RNR
Sbjct: 181 KEFKGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNR 240

Query: 241 GFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNS-AASQVKALYVKNI 300
           GFAFVLYYNNACADYSRQKM  +NFKL+GN+PTV+WADPKS+P++S AA+QVKALYVKNI
Sbjct: 241 GFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNI 300

Query: 301 PENTTTEQLKELFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIE 360
           PENT+TEQLKELFQ+HG+VTK+  PPGK G  KRDF F+HYAERSSALKAVK+TE+YE+ 
Sbjct: 301 PENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVN 360

Query: 361 GQVLEVVLAKPQSDKKPD-GAYSHISGSHSNHLLHAGYGSYGGSPYGSLG-GYGVTAGLH 420
           GQ LEVVLAKPQ+++K D  +YS+ +       +H  +G +  +PYG++G G G+     
Sbjct: 361 GQPLEVVLAKPQAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFS 420

Query: 421 QPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPM---PPSRSRRSERSSGSGGPTSR 480
           QPMIYGRG MP GMQMVPM+LPDGR+GYVLQQPG+PM   PP R RR++R++GS G + R
Sbjct: 421 QPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSGR 480

Query: 481 SGGSSSGDEVNRGRRYRPY 483
              S   D    GRRYRPY
Sbjct: 481 D-NSHEHDGNRGGRRYRPY 495

BLAST of CmaCh06G009960 vs. TAIR10
Match: AT3G52660.1 (AT3G52660.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 395.6 bits (1015), Expect = 4.4e-110
Identity = 219/485 (45.15%), Postives = 321/485 (66.19%), Query Frame = 1

Query: 3   DGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNTED 62
           D  E EERVDL+ DN  EE+   +EE V+ + V+       EE++EE+ EE + E     
Sbjct: 13  DSMESEERVDLDGDNDPEEI---LEEEVEYEEVE-------EEEIEEIEEEIEEE----- 72

Query: 63  NFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEEDL 122
                    + +E  E  + + +  +E++ ++H +LLALPPHGSEV++GG+  D +E DL
Sbjct: 73  ---------VEVEEEEEEEDAVATEEEEEKKRHVELLALPPHGSEVYLGGIPTDATEGDL 132

Query: 123 RDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIRCSLS 182
           +  C S+GE+ E+RI++++DSG+ KGYAF++F++K+ A +AI+ L+  + +GK I+CS +
Sbjct: 133 KGFCGSIGEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTLNNTDFRGKRIKCSTT 192

Query: 183 DSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNNACA 242
            +KHRLF+GNVP++W E + K+    +GPG + +EL K+PQN  RNRGFAF+ YYN+ACA
Sbjct: 193 QAKHRLFLGNVPRNWMESDIKKAANRIGPGVQIVELPKEPQNMGRNRGFAFIEYYNHACA 252

Query: 243 DYSRQKMSSANFKLDGNSPTVSWADPKS-TPDNSAASQVKALYVKNIPENTTTEQLKELF 302
           +YS+QKMS+ +FKLD N+PTVSWA+ +S    +S+ASQVKALY+KN+P + T E+LK LF
Sbjct: 253 EYSKQKMSNPSFKLDDNAPTVSWAESRSGGGGDSSASQVKALYIKNLPRDITQERLKALF 312

Query: 303 QQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQS 362
           + HG + KV +PP K G     + F+HYAER+S ++A+K TE+YEI+G +L+  LAKPQ+
Sbjct: 313 EHHGKILKVVIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEIDGHMLDCTLAKPQA 372

Query: 363 DKKPD-GAYSHISGS--HSNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPA 422
           D+K +     ++  S    N+     YG    SP+G+LGG+G +A   QP+++  G    
Sbjct: 373 DQKTNTNTVQNVQKSQLQPNYPPLLSYG-MAPSPFGALGGFGASA-YSQPLMHAGGHAAG 432

Query: 423 GMQMVPMVLPDGRIGYVLQQPGV-PMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGR 482
           GM M+P++LPDGRIGYVLQQPG+  MP    R S    G  G +S SG   S D      
Sbjct: 433 GMSMMPIMLPDGRIGYVLQQPGLAAMPQPPPRHSPPYRGGSGSSSSSGSKRSSDNGRGRS 471

BLAST of CmaCh06G009960 vs. TAIR10
Match: AT5G28390.1 (AT5G28390.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 132.5 bits (332), Expect = 7.0e-31
Identity = 94/239 (39.33%), Postives = 128/239 (53.56%), Query Frame = 1

Query: 249 MSSANFKLDGNSPTVSWADPKSTPD-NSAASQVKALYVKNIPENTTTEQLKELFQQHGDV 308
           MS+ +FKLD N+PTVSWA+ +S  + +S+ASQVKALY+KN+P + T E+LK LF+ HG +
Sbjct: 1   MSNPSFKLDDNAPTVSWAESRSGGEGDSSASQVKALYIKNLPRDITQERLKALFEHHGKI 60

Query: 309 TKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQSDKKPDG 368
            KV +PP K G     + F+HYAER+S ++A+K TE+YEI+                   
Sbjct: 61  LKVVIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEID------------------- 120

Query: 369 AYSHISGSHSNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGMQMVPMVL 428
                + ++S  L+HAG  + GG                             M M+P++L
Sbjct: 121 -----ASAYSQPLMHAGGHAAGG-----------------------------MSMMPIML 180

Query: 429 PDGRIGYVLQQPG---VPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGR-RYRPY 483
           PDGRI YVLQQPG   +P PP R     R  G  G +S    S +G    RGR RY PY
Sbjct: 181 PDGRIRYVLQQPGLAAMPQPPPRPSPPYR--GGSGSSSSKQSSDNG----RGRSRYNPY 180

BLAST of CmaCh06G009960 vs. TAIR10
Match: AT2G44710.1 (AT2G44710.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 123.2 bits (308), Expect = 4.2e-28
Identity = 109/406 (26.85%), Postives = 196/406 (48.28%), Query Frame = 1

Query: 8   EERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT------- 67
           +ER+DL+++    E ++   E  +E  + + D E   E+ EE+ EE +VE          
Sbjct: 108 DERLDLDDNEPEYEAEEYGGEEFEERELGQEDHELVNEEGEELEEEIEVEEEAGEFADEI 167

Query: 68  ----EDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGS-EVFIGGLSR 127
               ED  SED  ++ +IE +    K    +D ++ E H  L         E+F+G L +
Sbjct: 168 GDGAEDLDSEDDDDDHAIEEV----KHGETVDVEEEEHHDVLHERRKRKEFEIFVGSLDK 227

Query: 128 DVSEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGK 187
             SEEDL+ +   +GE+ E+RI+K+  + +SKG AF+ F T E A++A++EL    + GK
Sbjct: 228 GASEEDLKKVFGHVGEVTEVRILKNPQTKKSKGSAFLRFATVEQAKRAVKELKSPMINGK 287

Query: 188 TIRCSLSDSKHRLFIGNVPKSWTEDEFKRLIEGVG-PGAENIELIKDPQNPSRNRGFAFV 247
               + S     LF+GN+ K WT +  +  ++  G    ++I L++D  N + NRG+AF+
Sbjct: 288 KCGVTASQDNDTLFVGNICKIWTPEALREKLKHYGVENMDDITLVEDSNNVNMNRGYAFL 347

Query: 248 LYYNNACADYSRQKMSSANFKLDGNSPT-VSWADPKSTPDNSAASQVKALYVKNIPENTT 307
            + + + A  + +++   +       P  VS+ D     ++   +QVK +++  +  +  
Sbjct: 348 EFSSRSDAMDAHKRLVKKDVMFGVEKPAKVSFTDSFLDLEDEIMAQVKTIFIDGLLPSWN 407

Query: 308 TEQLKELFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEI-EGQVL 367
            E++++L + +G + KV +        ++DF F+ +    +A+   K     E+ EG+  
Sbjct: 408 EERVRDLLKPYGKLEKVELARNMPSARRKDFGFVTFDTHEAAVSCAKFINNSELGEGEDK 467

Query: 368 EVVLAKPQS--DKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSL 397
             V A+      K   G  S  S   S H    G G  G S +  L
Sbjct: 468 AKVRARLSRPLQKAGKGRQSSRSDQRSRH----GAGRSGRSSFARL 505

BLAST of CmaCh06G009960 vs. TAIR10
Match: AT2G23350.1 (AT2G23350.1 poly(A) binding protein 4)

HSP 1 Score: 87.8 bits (216), Expect = 2.0e-17
Identity = 99/382 (25.92%), Postives = 162/382 (42.41%), Query Frame = 1

Query: 108 VFIGGLSRDVSEEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEEL 167
           +F+  L + V  + L +     G I   ++  D   G+S+GY F+ F T++SA+ AIE+L
Sbjct: 136 LFVKNLDKSVDNKTLHEAFSGCGTIVSCKVATDH-MGQSRGYGFVQFDTEDSAKNAIEKL 195

Query: 168 HGKEVKGKTI----------RCSLSDSKH--RLFIGNVPKSWTEDEFKRLIEGVGPGAEN 227
           +GK +  K I          R S +D      +++ N+ ++ T+DE K      G    +
Sbjct: 196 NGKVLNDKQIFVGPFLRKEERESAADKMKFTNVYVKNLSEATTDDELKTTFGQYG-SISS 255

Query: 228 IELIKDPQNPSRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNS 287
             +++D     ++R F FV + N    D +R   +    K D     V  A  KS  +  
Sbjct: 256 AVVMRD--GDGKSRCFGFVNFENP--EDAARAVEALNGKKFDDKEWYVGKAQKKSERELE 315

Query: 288 AASQVKA-------------LYVKNIPENTTTEQLKELFQQHGDVTKVNMPPGKAGHSKR 347
            + + +              LYVKN+ +  T E+L+ELF + G +T   +    +G SK 
Sbjct: 316 LSRRYEQGSSDGGNKFDGLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKG 375

Query: 348 DFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQSDKKPDGAYSHISGSHSNHLLH 407
              F+ ++  S A + + E     + G+ L V LA+ + +++   A      S       
Sbjct: 376 S-GFVAFSAASEASRVLNEMNGKMVGGKPLYVALAQRKEERR---AKLQAQFSQMRPAFI 435

Query: 408 AGYGS-----YGGSPYGSLGGYGVTAGLHQPMIYGRGPMP-----AGMQMVPMVLPDGR- 452
            G G       GG+P           GL Q + YG+GP P      G    P ++P  R 
Sbjct: 436 PGVGPRMPIFTGGAP-----------GLGQQIFYGQGPPPIIPHQPGFGYQPQLVPGMRP 495

BLAST of CmaCh06G009960 vs. NCBI nr
Match: gi|449431998|ref|XP_004133787.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X2 [Cucumis sativus])

HSP 1 Score: 859.8 bits (2220), Expect = 2.3e-246
Identity = 442/482 (91.70%), Postives = 463/482 (96.06%), Query Frame = 1

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 60
           MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRR GE PEEDVEEVSEE QV T+T
Sbjct: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120
           ED FS+D RNN+S+ESIENR+KS+SLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDV EE
Sbjct: 61  EDKFSDD-RNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIRCS 180
           DLRD+CESLGEIFEIRIIKD+DSGESKGYAFI+FKTKE+AQKAIE+LHGKEVKGKTIRCS
Sbjct: 121 DLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCS 180

Query: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWT+DEF+RLIEGVGPG ENIELIKDPQNP+RNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA 240

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300
           CADYSRQKMSSANFKLDGNSPTVSWADPKS PDNSAA+QVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360
           FQQHG+VTKVNMPPGKAG SKRDFAFIHYAERSSALKAVKETEKYEIEGQ+LEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360

Query: 361 SDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420
           SDKK DGAYSHISGS+ NHLLH GYG YGG+PYGSLGGYGVTAG HQPMIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480
           QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERS+GSGG   RSGGSSS D+VNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYR 480

Query: 481 PY 483
           PY
Sbjct: 481 PY 481

BLAST of CmaCh06G009960 vs. NCBI nr
Match: gi|659074851|ref|XP_008437831.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X2 [Cucumis melo])

HSP 1 Score: 859.0 bits (2218), Expect = 4.0e-246
Identity = 439/482 (91.08%), Postives = 462/482 (95.85%), Query Frame = 1

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 60
           MAD SEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRR GE PEEDVEEVSEE QV T+T
Sbjct: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120
           ED FS DGRNN+S+ESIENR+KSASLLDED+LEKHAQLLALPPHGSEVFIGGLSRDV EE
Sbjct: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIRCS 180
           DLR++CESLGEIFEIRIIKD+DSGESKGYAFI+FKTKE+AQKAIE+LHGKEVKGKTIRCS
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCS 180

Query: 181 LSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWT+DEF+RLIEGVGPG ENIELIKDPQNP+RNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA 240

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKEL 300
           CADYSRQKMSSANFKLDGNSPTVSWADPKS PDN+AA+QVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKPQ 360
           FQQHG+VTKVNMPPGKAG SKRDFAFIHYAERSSALKAVKETEKYEIEGQ+LEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360

Query: 361 SDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAGM 420
           SDKK DGAYSHISGS+ NHLLH GYG YGG+PYGS+GGYGVTAG HQPMIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSIGGYGVTAGFHQPMIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRYR 480
           QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERS+GSGG   RSGGSSS D+VNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYR 480

Query: 481 PY 483
           PY
Sbjct: 481 PY 482

BLAST of CmaCh06G009960 vs. NCBI nr
Match: gi|778676745|ref|XP_011650655.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X1 [Cucumis sativus])

HSP 1 Score: 855.1 bits (2208), Expect = 5.8e-245
Identity = 442/483 (91.51%), Postives = 463/483 (95.86%), Query Frame = 1

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 60
           MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRR GE PEEDVEEVSEE QV T+T
Sbjct: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120
           ED FS+D RNN+S+ESIENR+KS+SLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDV EE
Sbjct: 61  EDKFSDD-RNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVK-GKTIRC 180
           DLRD+CESLGEIFEIRIIKD+DSGESKGYAFI+FKTKE+AQKAIE+LHGKEVK GKTIRC
Sbjct: 121 DLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180

Query: 181 SLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNN 240
           SLSDSKHRLFIGNVPKSWT+DEF+RLIEGVGPG ENIELIKDPQNP+RNRGFAFVLYYNN
Sbjct: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240

Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKE 300
           ACADYSRQKMSSANFKLDGNSPTVSWADPKS PDNSAA+QVKALYVKNIPENTTTEQLKE
Sbjct: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKE 300

Query: 301 LFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKP 360
           LFQQHG+VTKVNMPPGKAG SKRDFAFIHYAERSSALKAVKETEKYEIEGQ+LEVVLAKP
Sbjct: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360

Query: 361 QSDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAG 420
           QSDKK DGAYSHISGS+ NHLLH GYG YGG+PYGSLGGYGVTAG HQPMIYGRGPMPAG
Sbjct: 361 QSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAG 420

Query: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRY 480
           MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERS+GSGG   RSGGSSS D+VNRGRRY
Sbjct: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRY 480

Query: 481 RPY 483
           RPY
Sbjct: 481 RPY 482

BLAST of CmaCh06G009960 vs. NCBI nr
Match: gi|659074847|ref|XP_008437829.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X1 [Cucumis melo])

HSP 1 Score: 854.4 bits (2206), Expect = 9.9e-245
Identity = 439/483 (90.89%), Postives = 462/483 (95.65%), Query Frame = 1

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSEEHQVETNT 60
           MAD SEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRR GE PEEDVEEVSEE QV T+T
Sbjct: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVSEE 120
           ED FS DGRNN+S+ESIENR+KSASLLDED+LEKHAQLLALPPHGSEVFIGGLSRDV EE
Sbjct: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVK-GKTIRC 180
           DLR++CESLGEIFEIRIIKD+DSGESKGYAFI+FKTKE+AQKAIE+LHGKEVK GKTIRC
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180

Query: 181 SLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYNN 240
           SLSDSKHRLFIGNVPKSWT+DEF+RLIEGVGPG ENIELIKDPQNP+RNRGFAFVLYYNN
Sbjct: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240

Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLKE 300
           ACADYSRQKMSSANFKLDGNSPTVSWADPKS PDN+AA+QVKALYVKNIPENTTTEQLKE
Sbjct: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE 300

Query: 301 LFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAKP 360
           LFQQHG+VTKVNMPPGKAG SKRDFAFIHYAERSSALKAVKETEKYEIEGQ+LEVVLAKP
Sbjct: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360

Query: 361 QSDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSLGGYGVTAGLHQPMIYGRGPMPAG 420
           QSDKK DGAYSHISGS+ NHLLH GYG YGG+PYGS+GGYGVTAG HQPMIYGRGPMPAG
Sbjct: 361 QSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSIGGYGVTAGFHQPMIYGRGPMPAG 420

Query: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSGDEVNRGRRY 480
           MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERS+GSGG   RSGGSSS D+VNRGRRY
Sbjct: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRY 480

Query: 481 RPY 483
           RPY
Sbjct: 481 RPY 483

BLAST of CmaCh06G009960 vs. NCBI nr
Match: gi|593331167|ref|XP_007139010.1| (hypothetical protein PHAVU_009G257300g [Phaseolus vulgaris])

HSP 1 Score: 673.7 bits (1737), Expect = 2.4e-190
Identity = 349/491 (71.08%), Postives = 412/491 (83.91%), Query Frame = 1

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRDGERPEEDVEEVSE--EHQVET 60
           M++G+E++ERVDL+E+N+MEEMDDDVEE +D+DGVD  + E  E  VEE  E  +   E 
Sbjct: 1   MSEGAEIDERVDLDEENFMEEMDDDVEEQIDDDGVDGGEDENAEGSVEEHDEYEDSTAEV 60

Query: 61  NTEDNFSEDGRNNISIESIENRDKSASLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVS 120
             +D+  E  +++I+ E  ++ D+  S +DED+ EKH +LLALPPHGSEVFIGGL RDV 
Sbjct: 61  GGKDHLPEAEKSDIATEFGDD-DQKPSFIDEDEKEKHDELLALPPHGSEVFIGGLPRDVC 120

Query: 121 EEDLRDLCESLGEIFEIRIIKDRDSGESKGYAFISFKTKESAQKAIEELHGKEVKGKTIR 180
           E+DLRDLCE +G+I E+R++KDRD+GE+KGYAF++FKTKE AQKAIEE+H +E KGKT+R
Sbjct: 121 EDDLRDLCEPVGDILEVRLMKDRDTGENKGYAFVAFKTKEVAQKAIEEIHSREFKGKTLR 180

Query: 181 CSLSDSKHRLFIGNVPKSWTEDEFKRLIEGVGPGAENIELIKDPQNPSRNRGFAFVLYYN 240
           CSLS++KHRLFIGNVPK+WTED+F+++IEGVGPG ENIELIKDPQNPSRNRGFAFVLYYN
Sbjct: 181 CSLSETKHRLFIGNVPKTWTEDDFRKVIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYN 240

Query: 241 NACADYSRQKMSSANFKLDGNSPTVSWADPKSTPDNSAASQVKALYVKNIPENTTTEQLK 300
           NACADYSRQKMSSA+FKLDGN+PTV+WADPK++PD+SA+SQVKALYVKNIPEN TT+QLK
Sbjct: 241 NACADYSRQKMSSASFKLDGNTPTVTWADPKNSPDHSASSQVKALYVKNIPENVTTDQLK 300

Query: 301 ELFQQHGDVTKVNMPPGKAGHSKRDFAFIHYAERSSALKAVKETEKYEIEGQVLEVVLAK 360
           ELF++HG+VTKV MPPGKAG  KRDF FIHYAERSSALKAVKETEKYEI+GQ+LEVVLAK
Sbjct: 301 ELFRRHGEVTKVVMPPGKAG-GKRDFGFIHYAERSSALKAVKETEKYEIDGQLLEVVLAK 360

Query: 361 PQSDKKPDGAYSHISGSHSNHLLHAGYGSYGGSPYGSLG-GYGVTAGLHQPMIYGRGPMP 420
           PQ+DKKPDG Y +  G HSNHL H  YG++ G+PYGSLG GYGV  G  QPMIYGRGPMP
Sbjct: 361 PQADKKPDGGYGYNPGLHSNHLPHPAYGNFSGNPYGSLGAGYGVGGGYQQPMIYGRGPMP 420

Query: 421 AGMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSSGSGGPTSRSGGSSSG------D 480
           AGMQMVPMVLPDGRIGYVLQQPGV  PPSR RR ERS+G  G   R GG   G      D
Sbjct: 421 AGMQMVPMVLPDGRIGYVLQQPGVQAPPSRPRRIERSNGPSGQPGRGGGGGGGGGGSGND 480

Query: 481 EVNRGRRYRPY 483
           E NR RRYRPY
Sbjct: 481 EGNRSRRYRPY 489

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
HNRPQ_HUMAN6.8e-4433.33Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens GN=SYNCRIP PE=1 SV=2[more]
HNRPQ_MOUSE8.8e-4433.33Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus GN=Syncrip PE=1 SV=2[more]
HNRPQ_RAT8.8e-4433.33Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus GN=Syncrip PE=2 S... [more]
HNRPR_HUMAN1.7e-3930.70Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens GN=HNRNPR PE=1 SV=1[more]
RBM46_DANRE5.5e-3835.25Probable RNA-binding protein 46 OS=Danio rerio GN=rbm46 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
V7AZJ8_PHAVU1.7e-19071.08Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G257300g PE=4 SV=1[more]
I1JS33_SOYBN1.4e-18970.72Uncharacterized protein OS=Glycine max GN=GLYMA_03G260500 PE=4 SV=1[more]
A0A0L9TFD4_PHAAN1.2e-18870.87Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan635s006200 PE=4 SV=1[more]
A0A0S3RI95_PHAAN1.2e-18870.87Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G335800 PE=... [more]
I1NCQ2_SOYBN4.5e-18870.52Uncharacterized protein OS=Glycine max GN=GLYMA_19G259200 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G00830.12.9e-16261.12 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT3G52660.14.4e-11045.15 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT5G28390.17.0e-3139.33 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT2G44710.14.2e-2826.85 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT2G23350.12.0e-1725.92 poly(A) binding protein 4[more]
Match NameE-valueIdentityDescription
gi|449431998|ref|XP_004133787.1|2.3e-24691.70PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X2 [Cucumis sativus... [more]
gi|659074851|ref|XP_008437831.1|4.0e-24691.08PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X2 [Cucumis melo][more]
gi|778676745|ref|XP_011650655.1|5.8e-24591.51PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X1 [Cucumis sativus... [more]
gi|659074847|ref|XP_008437829.1|9.9e-24590.89PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X1 [Cucumis melo][more]
gi|593331167|ref|XP_007139010.1|2.4e-19071.08hypothetical protein PHAVU_009G257300g [Phaseolus vulgaris][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR003954RRM_dom_euk
IPR012677Nucleotide-bd_a/b_plait_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0050832 defense response to fungus
biological_process GO:1902464 regulation of histone H3-K27 trimethylation
biological_process GO:0010439 regulation of glucosinolate biosynthetic process
biological_process GO:0009909 regulation of flower development
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0045824 negative regulation of innate immune response
biological_process GO:0042742 defense response to bacterium
biological_process GO:0071395 cellular response to jasmonic acid stimulus
cellular_component GO:0030529 intracellular ribonucleoprotein complex
cellular_component GO:0005575 cellular_component
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0005829 cytosol
cellular_component GO:0005634 nucleus
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003682 chromatin binding
molecular_function GO:0003729 mRNA binding
molecular_function GO:0043565 sequence-specific DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh06G009960.1CmaCh06G009960.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 108..178
score: 1.7E-22coord: 188..254
score: 3.4E-9coord: 283..352
score: 1.1
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 187..264
score: 1.3E-9coord: 107..180
score: 1.4E-28coord: 282..355
score: 2.9
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 281..359
score: 15.733coord: 186..268
score: 11.759coord: 106..184
score: 2
IPR003954RNA recognition motif domain, eukaryoteSMARTSM00361rrm2_1coord: 107..180
score: 6.
IPR012677Nucleotide-binding alpha-beta plait domainGENE3DG3DSA:3.30.70.330coord: 263..367
score: 3.4E-24coord: 109..262
score: 3.2
IPR012677Nucleotide-binding alpha-beta plait domainunknownSSF54928RNA-binding domain, RBDcoord: 103..186
score: 2.42E-29coord: 186..362
score: 4.26
NoneNo IPR availablePANTHERPTHR24012FAMILY NOT NAMEDcoord: 103..230
score: 9.6E-209coord: 280..480
score: 9.6E-209coord: 44..62
score: 9.6E
NoneNo IPR availablePANTHERPTHR24012:SF479RNA RECOGNITION MOTIF-CONTAINING PROTEINcoord: 44..62
score: 9.6E-209coord: 280..480
score: 9.6E-209coord: 103..230
score: 9.6E

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh06G009960CmaCh14G021380Cucurbita maxima (Rimu)cmacmaB281