Cucsa.259640 (gene) Cucumber (Gy14) v1

NameCucsa.259640
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionRNA-binding protein
Locationscaffold02229 : 6041328 .. 6047039 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAGAAGAGATAAAATATTCGCGGGAGAAGAAGACGACGACGTTTAAGTAGATAGAAGATTCGGCTTCCAATTTAGCCCATCCGCCTTCAAGCCCTCGTCGTTTCAGCCCAGAGCCGCTTCCCCTTCTGCACACAAAGGCCCGAATCGAAAAAACTCACTCTAAGATATCTAACGCACCTCTGATTCTCCCCCTTCTCTCTGAGGTTCCCAAGCGAACCAAAGGAAATCAACCCAGATACAGAAACGCAAAGGATTCGCTCACAACTAAGATTCCAATTCTCGTACCTTCCGAATCCCTCACTTCACTGGTATGTCTTTCAAGGCTCCCACTGTGACTTCTTTCGCCTTTTTTTTCCCTATTTCATTATCTGGGTTCTTCATTTTTCAGTCCCTTAAGGTGTCTAGATGTGCTATTGATCGAATTGCTTATAGTGATGTGTTTTTTTTTTTAATGGTTTTTGGTTTCTTTAGCTGCCTCCCAATGCGCATGTTGGCGAGATTTATCCTGCTTATTTGTGTTTAGGTCTCGTACCACTCCCATTTAGGTTCGTGTTCTTCAATAGGATGTTAGATTTTTGCAATATCCATTCGTTTCTCGCGTTGTCTGTTACTATTCGATTCTGGGTCTCGTTTATTGGAAAACCGAGGTGTTTCCTTTTCGTTGTATTCTTTTTGTTCGATTTGCATATTAGGGGGCTGCGTTTTGTTTATTTTAGTATTTTGGGATTGGATGTCTTTGAAACGAACCACACTAGTTGATGAAACATGAGTCAGGCTTATGTGCCGATGGATTTTATTTTGTAATTCTGTGGGCAGACATCGTATTTTCTCTCCTCAGGTCCTTCGTTTTAGTTTTTAGAATTTCTTCATCTCAGAGAAAGTGTTGTGGAATTTACTTCAAAAATTCTTAATTCCGCTGATTCTTATCCATATAATCTAAATTGAACTCCTAATGATGTTGCTTCTAGGTGTCTTCAATGAACTGAAGTGGGCATATTTTCATTCTGATATTTATTTTATCCATTTTCTTTTTACTAGTTACTGATACATAACCATATTTATAATGTAAATGCATTCACTTTATTACAGGTGATTTTGTGCTTATCAAATTTGTTTGTTGAATGATACTATCTGTGGCGTGAAGCAGTCATGGCAGATGGTTCAGAAGTCGAGGAGCGGGTGGATCTTGAAGAGGACAATTACATGGAAGAGATGGATGATGATGTAGAGGAACATGTAGATGAGGATGGAGTAGATAGGAGAGCTGGTGAACTGCCCGAAGAGGATGTTGAAGAAGTAAGCGAAGAGCCTCAAGTTGGGACCGACACGGAAGATAAATTTTCAGATGATAGAAATAACTTATCCGTAGAATCTATAGAAAATAGAGAAAAGTCATCTTCTTTATTAGATGAAGATGATCTTGAGAAGCATGCTCAGCTTCTTGCCCTTCCTCCTCATGGATCTGAAGTTTTTATTGGTGGACTTTCACGTGATGTCTTAGAAGAAGATTTGAGAGATATGTGTGAATCCCTAGGAGAAATATTTGAGGTCTGCACTTTTTATTCTCTCTCGTGCTCTTTCTTTCTTCCTTTCTTTGAACCTTTGATTTTAGAGGTACGTTCTGTAACACAATTGTTTTGCAGATAAGGATAATAAAAGACAAAGATTCGGGTGAAAGCAAAGGTTATGCTTTTATAGCGTTTAAAACCAAAGAGGCAGCACAAAAGGCTATAGAGGATTTGCATGGTAAAGAAGTCAAGGTAGTTGTGGGATTCCTCAAGACTTTGATGTCCTTGTTACTTTATTATGTTTCAAAAGCATCAAAGCTGCTCTTTTCACATCTCCATCCATCATCGATAAATTTAAAATTGATTTTAGTTCATCCTTCACAATACAGGGTAAAACGATACGGTGTTCTCTGTCGGATTCTAAACACAGACTATTTATTGGTAATGTCCCAAAAAGTTGGACAGATGATGAGTTTAGGAGACTTATAGAAGGGGTTGGCCCTGGAGTTGAAAACATTGAGCTTATTAAGGTGAAGTTGCAAATTTATACATCTACCTTTTCAGAAATCAATGGTTATTGAGGCTTTATGTGCTTTATTCTGTATAACCTACTGCAGGATCCTCAAAACCCAAACCGAAATCGTGGATTTGCATTTGTTCTGTATTATAACAATGCCTGTGCTGATTATTCAAGGCAGAAAATGTCGAGTGCAAATTTTAAGCTGGATGGAAATTCCCCAACTGTTAGTTGGGCTGATCCAAAAAGTATGCCCGATAACTCTGCTGCTGCTCAGGTAATCAAGTTATCATGACTGGAGAAAATTATATGGGATCTGCATGGCAATTTCAAGTACCTTGAGATTTTATATCAACTGGAATTTTGTTAAAAACTGTGGTACTAAGGTTAAAAGAGTAAACCAAAACTGTTAATGGGCAGAGAAAAGTCCTTCGTGCTGTTTTGTTTTTTCAATTTCAATTTCAATTACTAAGCAAGGCAACCAAATTTGAAATATTCGAGCCATAAAAATATATCGATTGACCAATTGAACTTTGAGTAAGGAAATGTGGTTATAAACTTATAAAGATGGTTATCTTGGTGATTTTGAATCAAATTGCCTAAATTCCTCTTTGACCCAAGCTCAGTACAAAACCTTGAACAGAATAGTCTGCTGCACCTCACTAATCCTCTAGTTGGCTACTGACAAACTTTAGTGAATTATAACTATCATTTTTAACAAGCCATTAGTCTACTCTTATGCCGTAGTTAAATGAAGTAAAGAAAGGAAAACCTAAACATATAGCTTTTGGTTCTCCTTTGTTCAACCTTCTCACCTATAGATGCTCCTGCTCTCCCACAATAACTTATAAGGAATACTGAAATAAAACTGAAGATGAAATAGTAATAATTATATGTTCTTGAACATTCTTCCATTTCTCTCCATGAAAGCTGAGATTTTTTAAAATAATAATAACTAACTACAAGGTAACATGATTAAGTGCATGAATGACAAAAGTTAATTTTTTAGGTTGTCTTCTGGAAAATCTCTCTCTAGGAAAGAACATTTAGTGCACCACCTTGGTAAACATGTTTCCAATTGTTCCATCTTTGTAACCTTTAAATTTTTTTAAGAAACGGAGACAATCCTTTTTATTAATTATAAATGAGACTAATTACCGAAGAACAAGAGTAAGAGCAAAAAAAGAAAACAATTCATCCAACAAACGAAACAAAGATGAACTCTGGCAATAGAAATATGAAAACGACCTACAAACGATCACAAAGAAGAAACAACGAAAGAACCAAAGTAACAAAGAACTGAAACATTAGTAAAGAGTTTAAACACTTAGTCGAAAAGCGCCCACTTCAGACTGAAATTTTGTACTCCACATGCTTCAGTTTGAAAGAAGGGAACCCCAAGAAGAGGCAATTGGCTGCTTCAAAACTATCCAACCCAAATAGTTCTTTTAATATTTAATGGGATTTCGCAAGACTGGGAATGAGAGCGAGTAAAGCACTAAGATTGGTCTCTAGAAGCTCAAAATGACCCTACCTCTCAAACTCAATTGACTTCTTATAATGAGCCATCTTCTCACTACTGACACCAAAAGGAGAGTCAAAAGAAGACTCACCTTTTTTTTTTGAGGAAATGCTTGGGATGCAGAGTGAACCTCTCAAAAACTTCACCTTAGAGTTGGGCAAAGAAAAAGCAGAATGCTTAAAGTTAAAACGGTGGAGGAAGAAGAGATCGTGAAGCTGACTCCGGTAGAAGGGGTTGGAACAAGTGCTTGGGTGCAGCTAACATCCAATAAGTCAGGGTTCAAATCAGAAATCAACATGGCTTTGGTAACATTCTTTTTGGGGAAGCCCTTTGCTCTCTTTTTTCTTACAAAATGATTAAGGAATGGTTTGAAGAGGTGAGGGAAAACTCGATCTTTTTCATTATGACTGTCTATTGAGGTGTACTTGAAAGAATTGAATTATAATATGAAATAAAATTTAGTCTCCATTACAGGAAGATATTTAAAAGCACATGATAGTTTGGTACTACATTGTAATTGGCGAAGTCTTTTAAACGCTTGTTTTGTATTGGCATTGACTTCCTGGTTTTATTTATTTGTGCTAGCAAGTTATTATTGATCTACAACTTTATGGATTGCAGGTGAAGGCTCTTTATGTGAAAAACATTCCCGAGAATACTACTACTGAGCAACTGAAAGAATTGTTTCAGCAGCATGGGGAAGTGACAAAAGTGAATATGCCACCTGGCAAAGCTGGGAGTAGTAAACGGGATTTTGCATTCATCCATTATGCTGAGAGGTCAAGTGCATTGAAGGCTGTCAAAGAGACAGAGAAATATGAAATTGAAGGTTTAGTTTTTATATTCTTGGAGATTTACATTTTATATCTCAAATGAACAATAACATTCCCTGTTCTTTAGGAAGAAAACGTTAAAACATATTTTGGCTTTTATTTCTATTGGTTGATGCACCCGTGAGCCAATCTTTTTCTGACAGCTTGTTGAATTATTTTATCTCTATTTACTGAATTGGACGATCTGTTCAACTTATGTGTGGAATTTCATTTACAGCATATCCTCAACATTTAAAAGTAAAGTAGGATGAATCACCAGCAGTCAAGTTGTCTAAACAGATCTTTTGTATTTGACAATGTTTTATAAAGAGAAATGCTTTGTTTTAACTTTTTTCTTGCAATTGCAACCCAAAGGATAATCTTCAGAGATTTTAATCTGCAGGCCAACTTTTGGAGGTTGTCCTTGCAAAGCCTCAAAGTGATAAAAAATCAGATGGGGCCTATTCCCATATATCTGGAAGTTATCCCAACCATCTTCTTCATGGTGGATACGGTGGTTATGGTGGAAATCCATATGGTTCCCTAGGTGGGTATGGTGTTACTGCTGGCTTCCATCAGGTAAATTTTTTTTCTTTCTTATCTAAAAAAGTTATATTGCGTCATCTCAGTTAGGTGCATCTCCCAAAGTGAAAAGAAAAGAAATATAAATTTCTTTTTTCCTCGACATTAATCTCATGGATTTTTTTTTCCATGTAACAGCCAATGATTTATGGTAGGGGACCAATGCCGGCGGGAATGCAGATGGTACCAATGGTTTTACCAGATGGTCGAATTGGTTATGTTCTGTAAGATATCACCCTTAATGGTTCGAAGTCCATTTTATCTATATAATCTATATATATATAATTGTAAATTGTATATATTGTCACTTATGAATGCAGTCAGCAACCTGGAGTACCAATGCCCCCCTCTCGATCTCGAAGAAGTGAGAGGAGCAATGGATCAGGTGGAACAATGGGTCGTTCAGGAGGTAGTAGCAGTAGTGATGATGTCAACCGTGGCAGAAGGTATCGGCCCTATTAATGATAAAGAACTGAAGACAATGGGTCCTTAGGCTAAATCACAGGAAATAACAAGATCCCCCACCCAGAAACAGAATGTAAAAGAAACTGAACATAAGAGAGAGCTGAGAGGTTTTGAATGACTGAGAAAAGATTGCATTGAGATCCTTTTTCAGGATAAATTGGAGGATGATTTGCTTTTCTGGCAATTCTTATTAACATAGAGTTAAACAAAGAAATTATGTGTACCAAAGCGATGCAGTTGAAAAGTTCTGCTCAAATTTTAAATCTTCTGTTCTCTCTCCCATTGTTCTTGGTGTTCTTTCCAAG

mRNA sequence

GGAGAAGAGATAAAATATTCGCGGGAGAAGAAGACGACGACGTTTAAGTAGATAGAAGATTCGGCTTCCAATTTAGCCCATCCGCCTTCAAGCCCTCGTCGTTTCAGCCCAGAGCCGCTTCCCCTTCTGCACACAAAGGCCCGAATCGAAAAAACTCACTCTAAGATATCTAACGCACCTCTGATTCTCCCCCTTCTCTCTGAGGTTCCCAAGCGAACCAAAGGAAATCAACCCAGATACAGAAACGCAAAGGATTCGCTCACAACTAAGATTCCAATTCTCGTACCTTCCGAATCCCTCACTTCACTGGTGATTTTGTGCTTATCAAATTTGTTTGTTGAATGATACTATCTGTGGCGTGAAGCAGTCATGGCAGATGGTTCAGAAGTCGAGGAGCGGGTGGATCTTGAAGAGGACAATTACATGGAAGAGATGGATGATGATGTAGAGGAACATGTAGATGAGGATGGAGTAGATAGGAGAGCTGGTGAACTGCCCGAAGAGGATGTTGAAGAAGTAAGCGAAGAGCCTCAAGTTGGGACCGACACGGAAGATAAATTTTCAGATGATAGAAATAACTTATCCGTAGAATCTATAGAAAATAGAGAAAAGTCATCTTCTTTATTAGATGAAGATGATCTTGAGAAGCATGCTCAGCTTCTTGCCCTTCCTCCTCATGGATCTGAAGTTTTTATTGGTGGACTTTCACGTGATGTCTTAGAAGAAGATTTGAGAGATATGTGTGAATCCCTAGGAGAAATATTTGAGATAAGGATAATAAAAGACAAAGATTCGGGTGAAAGCAAAGGTTATGCTTTTATAGCGTTTAAAACCAAAGAGGCAGCACAAAAGGCTATAGAGGATTTGCATGGTAAAGAAGTCAAGGGTAAAACGATACGGTGTTCTCTGTCGGATTCTAAACACAGACTATTTATTGGTAATGTCCCAAAAAGTTGGACAGATGATGAGTTTAGGAGACTTATAGAAGGGGTTGGCCCTGGAGTTGAAAACATTGAGCTTATTAAGGATCCTCAAAACCCAAACCGAAATCGTGGATTTGCATTTGTTCTGTATTATAACAATGCCTGTGCTGATTATTCAAGGCAGAAAATGTCGAGTGCAAATTTTAAGCTGGATGGAAATTCCCCAACTGTTAGTTGGGCTGATCCAAAAAGTATGCCCGATAACTCTGCTGCTGCTCAGCATGGGGAAGTGACAAAAGTGAATATGCCACCTGGCAAAGCTGGGAGTAGTAAACGGGATTTTGCATTCATCCATTATGCTGAGAGGTCAAGTGCATTGAAGGCTGTCAAAGAGACAGAGAAATATGAAATTGAAGGCCAACTTTTGGAGGTTGTCCTTGCAAAGCCTCAAAGTGATAAAAAATCAGATGGGGCCTATTCCCATATATCTGGAAGTTATCCCAACCATCTTCTTCATGGTGGATACGGTGGTTATGGTGGAAATCCATATGGTTCCCTAGGTGGGTATGGTGTTACTGCTGGCTTCCATCAGCCAATGATTTATGGTAGGGGACCAATGCCGGCGGGAATGCAGATGGTACCAATGGTTTTACCAGATGGTCGAATTGGTTATGTTCTTCAGCAACCTGGAGTACCAATGCCCCCCTCTCGATCTCGAAGAAGTGAGAGGAGCAATGGATCAGGTGGAACAATGGGTCGTTCAGGAGGTAGTAGCAGTAGTGATGATGTCAACCGTGGCAGAAGGTATCGGCCCTATTAATGATAAAGAACTGAAGACAATGGGTCCTTAGGCTAAATCACAGGAAATAACAAGATCCCCCACCCAGAAACAGAATGTAAAAGAAACTGAACATAAGAGAGAGCTGAGAGGTTTTGAATGACTGAGAAAAGATTGCATTGAGATCCTTTTTCAGGATAAATTGGAGGATGATTTGCTTTTCTGGCAATTCTTATTAACATAGAGTTAAACAAAGAAATTATGTGTACCAAAGCGATGCAGTTGAAAAGTTCTGCTCAAATTTTAAATCTTCTGTTCTCTCTCCCATTGTTCTTGGTGTTCTTTCCAAG

Coding sequence (CDS)

ATGGCAGATGGTTCAGAAGTCGAGGAGCGGGTGGATCTTGAAGAGGACAATTACATGGAAGAGATGGATGATGATGTAGAGGAACATGTAGATGAGGATGGAGTAGATAGGAGAGCTGGTGAACTGCCCGAAGAGGATGTTGAAGAAGTAAGCGAAGAGCCTCAAGTTGGGACCGACACGGAAGATAAATTTTCAGATGATAGAAATAACTTATCCGTAGAATCTATAGAAAATAGAGAAAAGTCATCTTCTTTATTAGATGAAGATGATCTTGAGAAGCATGCTCAGCTTCTTGCCCTTCCTCCTCATGGATCTGAAGTTTTTATTGGTGGACTTTCACGTGATGTCTTAGAAGAAGATTTGAGAGATATGTGTGAATCCCTAGGAGAAATATTTGAGATAAGGATAATAAAAGACAAAGATTCGGGTGAAAGCAAAGGTTATGCTTTTATAGCGTTTAAAACCAAAGAGGCAGCACAAAAGGCTATAGAGGATTTGCATGGTAAAGAAGTCAAGGGTAAAACGATACGGTGTTCTCTGTCGGATTCTAAACACAGACTATTTATTGGTAATGTCCCAAAAAGTTGGACAGATGATGAGTTTAGGAGACTTATAGAAGGGGTTGGCCCTGGAGTTGAAAACATTGAGCTTATTAAGGATCCTCAAAACCCAAACCGAAATCGTGGATTTGCATTTGTTCTGTATTATAACAATGCCTGTGCTGATTATTCAAGGCAGAAAATGTCGAGTGCAAATTTTAAGCTGGATGGAAATTCCCCAACTGTTAGTTGGGCTGATCCAAAAAGTATGCCCGATAACTCTGCTGCTGCTCAGCATGGGGAAGTGACAAAAGTGAATATGCCACCTGGCAAAGCTGGGAGTAGTAAACGGGATTTTGCATTCATCCATTATGCTGAGAGGTCAAGTGCATTGAAGGCTGTCAAAGAGACAGAGAAATATGAAATTGAAGGCCAACTTTTGGAGGTTGTCCTTGCAAAGCCTCAAAGTGATAAAAAATCAGATGGGGCCTATTCCCATATATCTGGAAGTTATCCCAACCATCTTCTTCATGGTGGATACGGTGGTTATGGTGGAAATCCATATGGTTCCCTAGGTGGGTATGGTGTTACTGCTGGCTTCCATCAGCCAATGATTTATGGTAGGGGACCAATGCCGGCGGGAATGCAGATGGTACCAATGGTTTTACCAGATGGTCGAATTGGTTATGTTCTTCAGCAACCTGGAGTACCAATGCCCCCCTCTCGATCTCGAAGAAGTGAGAGGAGCAATGGATCAGGTGGAACAATGGGTCGTTCAGGAGGTAGTAGCAGTAGTGATGATGTCAACCGTGGCAGAAGGTATCGGCCCTATTAA

Protein sequence

MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDTEDKFSDDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEEDLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKGKTIRCSLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYRPY*
BLAST of Cucsa.259640 vs. Swiss-Prot
Match: HNRPR_HUMAN (Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens GN=HNRNPR PE=1 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.4e-52
Identity = 136/421 (32.30%), Postives = 211/421 (50.12%), Query Frame = 1

Query: 101 PPHGSEVFIGGLSRDVLEEDLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQ 160
           P  G+EVF+G + RD+ E++L  + E  G I+++R++ D  SG+++GYAFI F  KEAAQ
Sbjct: 161 PGIGTEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQ 220

Query: 161 KAIEDLHGKEVKVGKTIRCSLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIK 220
           +A++     E++ GK +   +S + +RLF+G++PK+ T +        V  G+ ++ L  
Sbjct: 221 EAVKLCDSYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYH 280

Query: 221 DPQNPNRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQV 280
            P +  +NRGF F+ Y ++  A  +R+++ S   K+ GN  TV WADP   PD    A+V
Sbjct: 281 QPDDKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKV 340

Query: 281 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 340
           K L+V+N+    T E L++ F + G++ +V           +D+AF+H+ +R +A+KA+ 
Sbjct: 341 KVLFVRNLATTVTEEILEKSFSEFGKLERV--------KKLKDYAFVHFEDRGAAVKAMD 400

Query: 341 ETEKYEIEGQLLEVVLAKPQSDKKSD---GAYSHISGSYPNHLLH--------------- 400
           E    EIEG+ +E+VLAKP   K+ +      +  S +Y ++  H               
Sbjct: 401 EMNGKEIEGEEIEIVLAKPPDKKRKERQAARQASRSTAYEDYYYHPPPRMPPPIRGRGRG 460

Query: 401 GGYGGYGGNP--------YGSLGGY---GVTAGFHQP--------MIYGRG--------- 460
           GG GGYG  P        Y    GY       G+  P         + GRG         
Sbjct: 461 GGRGGYGYPPDYYGYEDYYDDYYGYDYHDYRGGYEDPYYGYDDGYAVRGRGGGRGGRGAP 520

Query: 461 PMPAGMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRR--------SERSNGSGGTMGRSGG 468
           P P G    P   P GR GY   Q G P+ P R  R         +R  GS G+ G  GG
Sbjct: 521 PPPRGRGAPP---PRGRAGY--SQRGAPLGPPRGSRGGRGGPAQQQRGRGSRGSRGNRGG 568

BLAST of Cucsa.259640 vs. Swiss-Prot
Match: HNRPQ_HUMAN (Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens GN=SYNCRIP PE=1 SV=2)

HSP 1 Score: 194.1 bits (492), Expect = 3.5e-48
Identity = 105/315 (33.33%), Postives = 177/315 (56.19%), Query Frame = 1

Query: 101 PPHGSEVFIGGLSRDVLEEDLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQ 160
           P  G+E+F+G + RD+ E++L  + E  G I+++R++ D  +G ++GYAF+ F TKEAAQ
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217

Query: 161 KAIEDLHGKEVKVGKTIRCSLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIK 220
           +A++  +  E++ GK I   +S + +RLF+G++PKS T ++       V  G+ ++ L  
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277

Query: 221 DPQNPNRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQV 280
            P +  +NRGF F+ Y ++  A  +R+++ S   K+ GN  TV WADP   PD    A+V
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337

Query: 281 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 340
           K L+V+N+    T E L++ F Q G++ +V           +D+AFIH+ ER  A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKAFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 397

Query: 341 ETEKYEIEGQLLEVVLAKPQSDKKSDGAYSHISGSYPNHLLHGGYGGYG---------GN 400
           E    ++EG+ +E+V AKP   K+ +      +     + ++  Y  YG         G 
Sbjct: 398 EMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAA---KNQMYDDYYYYGPPHMPPPTRGR 457

Query: 401 PYGSLGGYGVTAGFH 407
             G  GGYG    ++
Sbjct: 458 GRGGRGGYGYPPDYY 461

BLAST of Cucsa.259640 vs. Swiss-Prot
Match: HNRPQ_MOUSE (Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus GN=Syncrip PE=1 SV=2)

HSP 1 Score: 193.7 bits (491), Expect = 4.5e-48
Identity = 105/315 (33.33%), Postives = 177/315 (56.19%), Query Frame = 1

Query: 101 PPHGSEVFIGGLSRDVLEEDLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQ 160
           P  G+E+F+G + RD+ E++L  + E  G I+++R++ D  +G ++GYAF+ F TKEAAQ
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217

Query: 161 KAIEDLHGKEVKVGKTIRCSLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIK 220
           +A++  +  E++ GK I   +S + +RLF+G++PKS T ++       V  G+ ++ L  
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277

Query: 221 DPQNPNRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQV 280
            P +  +NRGF F+ Y ++  A  +R+++ S   K+ GN  TV WADP   PD    A+V
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337

Query: 281 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 340
           K L+V+N+    T E L++ F Q G++ +V           +D+AFIH+ ER  A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKSFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 397

Query: 341 ETEKYEIEGQLLEVVLAKPQSDKKSDGAYSHISGSYPNHLLHGGYGGYG---------GN 400
           E    ++EG+ +E+V AKP   K+ +      +     + ++  Y  YG         G 
Sbjct: 398 EMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAA---KNQMYDDYYYYGPPHMPPPTRGR 457

Query: 401 PYGSLGGYGVTAGFH 407
             G  GGYG    ++
Sbjct: 458 GRGGRGGYGYPPDYY 461

BLAST of Cucsa.259640 vs. Swiss-Prot
Match: HNRPQ_RAT (Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus GN=Syncrip PE=2 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 4.5e-48
Identity = 105/315 (33.33%), Postives = 177/315 (56.19%), Query Frame = 1

Query: 101 PPHGSEVFIGGLSRDVLEEDLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQ 160
           P  G+E+F+G + RD+ E++L  + E  G I+++R++ D  +G ++GYAF+ F TKEAAQ
Sbjct: 68  PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 127

Query: 161 KAIEDLHGKEVKVGKTIRCSLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIK 220
           +A++  +  E++ GK I   +S + +RLF+G++PKS T ++       V  G+ ++ L  
Sbjct: 128 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 187

Query: 221 DPQNPNRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQV 280
            P +  +NRGF F+ Y ++  A  +R+++ S   K+ GN  TV WADP   PD    A+V
Sbjct: 188 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 247

Query: 281 KALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVK 340
           K L+V+N+    T E L++ F Q G++ +V           +D+AFIH+ ER  A+KA++
Sbjct: 248 KVLFVRNLANTVTEEILEKSFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 307

Query: 341 ETEKYEIEGQLLEVVLAKPQSDKKSDGAYSHISGSYPNHLLHGGYGGYG---------GN 400
           E    ++EG+ +E+V AKP   K+ +      +     + ++  Y  YG         G 
Sbjct: 308 EMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAA---KNQMYDDYYYYGPPHMPPPTRGR 367

Query: 401 PYGSLGGYGVTAGFH 407
             G  GGYG    ++
Sbjct: 368 GRGGRGGYGYPPDYY 371

BLAST of Cucsa.259640 vs. Swiss-Prot
Match: A1CF_HUMAN (APOBEC1 complementation factor OS=Homo sapiens GN=A1CF PE=1 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 4.1e-41
Identity = 105/319 (32.92%), Postives = 170/319 (53.29%), Query Frame = 1

Query: 99  ALPPHGSEVFIGGLSRDVLEEDLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEA 158
           A P  G E+FIG L RD+ E++L  +CE +G+I+E+R++ D + G ++GYAF+ F  K  
Sbjct: 50  APPERGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDFN-GNNRGYAFVTFSNKVE 109

Query: 159 AQKAIEDLHGKEVKVGKTIRCSLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIEL 218
           A+ AI+ L+  E++ G+ +    S    RLF+G +PK+   +E    ++ V  GV ++ +
Sbjct: 110 AKNAIKQLNNYEIRNGRLLGVCASVDNCRLFVGGIPKTKKREEILSEMKKVTEGVVDVIV 169

Query: 219 IKDPQNPNRNRGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAA 278
                +  +NRGFAFV Y ++  A  +R+K+     +L G+   V WA+P+   D    +
Sbjct: 170 YPSAADKTKNRGFAFVEYESHRAAAMARRKLLPGRIQLWGHGIAVDWAEPEVEVDEDTMS 229

Query: 279 QVKALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSK--RDFAFIHYAERSSAL 338
            VK LYV+N+  +T+ E +++ F         N+ PG     K  RD+AF+H++ R  A+
Sbjct: 230 SVKILYVRNLMLSTSEEMIEKEFN--------NIKPGAVERVKKIRDYAFVHFSNREDAV 289

Query: 339 KAVKETEKYEIEGQLLEVVLAKPQSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSL 398
           +A+K      ++G  +EV LAKP  DK S   Y+  +G     +L G Y    G  Y   
Sbjct: 290 EAMKALNGKVLDGSPIEVTLAKP-VDKDSYVRYTRGTGG-RGTMLQGEYTYSLGQVYDPT 349

Query: 399 GGYGVTAGFHQPMIYGRGP 416
             Y     F+ P  Y   P
Sbjct: 350 TTYLGAPVFYAPQTYAAIP 357

BLAST of Cucsa.259640 vs. TrEMBL
Match: D7U819_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02700 PE=4 SV=1)

HSP 1 Score: 709.5 bits (1830), Expect = 2.7e-201
Identity = 354/484 (73.14%), Postives = 412/484 (85.12%), Query Frame = 1

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
           MA+G+EVE+RVDL++DNYMEEMDDDVEE + EDGV+       +E+VEE  E+ + G   
Sbjct: 1   MAEGTEVEDRVDLDDDNYMEEMDDDVEEQI-EDGVEGGG----DENVEEEYEDSKAGGSG 60

Query: 61  EDKFSD-DRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
           ED+  + D + ++ E +++ E  ++ +DED+ EKHAQLLALPPHGSE+FIGGL R+ LEE
Sbjct: 61  EDQLLEVDESRIANEPLKDEENPTASVDEDEKEKHAQLLALPPHGSEIFIGGLPREALEE 120

Query: 121 DLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180
           DLRD+CE +GE  E+R++K++DSGESKGYAFI+FKTKE AQKAIE+LH KE K G+TIRC
Sbjct: 121 DLRDLCEPIGEALEVRLMKNRDSGESKGYAFISFKTKEIAQKAIEELHSKEFK-GRTIRC 180

Query: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240
           SLS+SKHRLFIGNVPKSWTDDEFR++IE +GPG ENIELIKDPQNP+RNRGFAFV YYNN
Sbjct: 181 SLSESKHRLFIGNVPKSWTDDEFRKVIEDIGPGAENIELIKDPQNPSRNRGFAFVEYYNN 240

Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKE 300
           ACADY RQKMSS+NFKLDGN+PTVSWADPKS  D+SAAAQVKALYVKNIPENTTTEQLKE
Sbjct: 241 ACADYGRQKMSSSNFKLDGNTPTVSWADPKSTSDHSAAAQVKALYVKNIPENTTTEQLKE 300

Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
           LFQ+HGEVTKV MPP K+G SKRDF FIH+AERSSALKAVK+TEK+EI+GQ L+V LAKP
Sbjct: 301 LFQRHGEVTKVVMPPAKSGQSKRDFGFIHFAERSSALKAVKDTEKHEIDGQALDVSLAKP 360

Query: 361 QSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLG-GYGVTAGFHQPMIYGRGPMPA 420
           QSDKK +G + + SG +PN L H GYGG+GGNPYGSLG GYGV+A F QP+IYGRGPMPA
Sbjct: 361 QSDKKFEGVHPYSSG-HPNFLPHPGYGGFGGNPYGSLGPGYGVSAPFQQPVIYGRGPMPA 420

Query: 421 GMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRR 480
           GM MVPMVLPDGRIGYVLQQPGV MPP R RR+ERSNGS G  GR GGSS S D NR RR
Sbjct: 421 GMHMVPMVLPDGRIGYVLQQPGVQMPPPRPRRNERSNGSSGQQGR-GGSSGSGDDNRSRR 476

Query: 481 YRPY 483
           YRPY
Sbjct: 481 YRPY 476

BLAST of Cucsa.259640 vs. TrEMBL
Match: M5XJC0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004918mg PE=4 SV=1)

HSP 1 Score: 704.1 bits (1816), Expect = 1.2e-199
Identity = 349/488 (71.52%), Postives = 411/488 (84.22%), Query Frame = 1

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAG---ELPEEDVEEVSEEPQVG 60
           MA+G+EVEERVDL+EDNYMEEMDDDVEE +DEDGVD   G   E  EE+ EE  E+P   
Sbjct: 1   MAEGAEVEERVDLDEDNYMEEMDDDVEEQIDEDGVDGVDGGSDENVEENAEEAHEDPTTK 60

Query: 61  TDTEDKFSD-DRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDV 120
              +D+  + D ++ + E +++ EK S+ ++E++ EKHAQLLALPP+GSEVFIGGL +D 
Sbjct: 61  ASEKDQSPEPDESHNAGEFVDDEEKPSASVNEEEKEKHAQLLALPPYGSEVFIGGLPKDT 120

Query: 121 LEEDLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKT 180
           LEEDLRD+C+ +GEI EIR+++D+++GESKGYAFI FKTKE AQKAIE+LH K  K GKT
Sbjct: 121 LEEDLRDLCDEIGEIIEIRLMQDRETGESKGYAFIGFKTKEVAQKAIEELHNKAFK-GKT 180

Query: 181 IRCSLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLY 240
           +RCSLS++KHRLFIGNVPK WT+DEFR++IE VGPGVE+IELIKDPQNP+RNRGFAFVLY
Sbjct: 181 LRCSLSETKHRLFIGNVPKIWTEDEFRKVIEEVGPGVEHIELIKDPQNPSRNRGFAFVLY 240

Query: 241 YNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQ 300
           YNNACADYSRQKMS++NF+LDGNSPTV+WADPKS  D+SAAAQVKALYVKNIPENT+TE+
Sbjct: 241 YNNACADYSRQKMSNSNFRLDGNSPTVTWADPKSTSDHSAAAQVKALYVKNIPENTSTEK 300

Query: 301 LKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVL 360
           LKELFQ+HGEVTKV MPPGK G  KRDF F+H+AERSSALKAVK+TEKYEI+GQ LEVVL
Sbjct: 301 LKELFQRHGEVTKVVMPPGKGGQGKRDFGFVHFAERSSALKAVKDTEKYEIDGQPLEVVL 360

Query: 361 AKPQSDKKSDGAYSHISGSYPNHLLHGGY-GGYGGNPYGSL-GGYGVTAGFHQPMIYGRG 420
           AKPQ++KKSDGAY + +G + NHL H GY GG+ GNPYGS+ GGY V AGF QPMIYGRG
Sbjct: 361 AKPQTEKKSDGAYPYNAGPHANHLSHPGYGGGFAGNPYGSVGGGYSVPAGFQQPMIYGRG 420

Query: 421 PMPAGMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVN 480
           PMPAGM MVPMVLPDGRIGYVLQQPG  +P  R RR +RSNG  G  GR GG   SD+ N
Sbjct: 421 PMPAGMHMVPMVLPDGRIGYVLQQPGAQIPTPRPRRVDRSNGPSGQPGRGGG--GSDESN 480

Query: 481 RGRRYRPY 483
           RGRRYRPY
Sbjct: 481 RGRRYRPY 485

BLAST of Cucsa.259640 vs. TrEMBL
Match: I1JS33_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_03G260500 PE=4 SV=1)

HSP 1 Score: 698.7 bits (1802), Expect = 4.8e-198
Identity = 337/485 (69.48%), Postives = 408/485 (84.12%), Query Frame = 1

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVS-EEPQVGTD 60
           M++G+E++ERVDL+E+NYMEEMDDDVEE +D+DGVD    E  E  VEE   E+      
Sbjct: 1   MSEGAEIDERVDLDEENYMEEMDDDVEEQIDDDGVDGGEDENAEGSVEEHEYEDSAAEAG 60

Query: 61  TEDKFSDDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
            +D+  +   +       + E+  S +DED+ EKH +LLALPPHGSEVFIGGL RDV E+
Sbjct: 61  GKDQLPEAEKSDIATEFGDDEQKLSFIDEDEKEKHDELLALPPHGSEVFIGGLPRDVCED 120

Query: 121 DLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180
           DLR++CE +G+I E+R++KD+D+GE KGYAF+AFKTKE AQKAIE++H KE K GKT+RC
Sbjct: 121 DLRELCEPMGDILEVRLMKDRDTGEHKGYAFVAFKTKEVAQKAIEEIHSKEFK-GKTLRC 180

Query: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240
           SLS++KHRLFIGNVPK+WT+D+FR+++EGVGPGVE IELIKDPQNP+RNRGFAFVLYYNN
Sbjct: 181 SLSETKHRLFIGNVPKTWTEDDFRKVVEGVGPGVETIELIKDPQNPSRNRGFAFVLYYNN 240

Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKE 300
           ACADYSRQKM+S++FKLDGN+PTV+WADPK+ PD+SA++QVKALYVKNIPEN TTEQLKE
Sbjct: 241 ACADYSRQKMASSSFKLDGNTPTVTWADPKNSPDHSASSQVKALYVKNIPENVTTEQLKE 300

Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
           LF++HGEVTKV MPPGKAG  KRDF FIHYAERSSALKAVK+TEKYEI+GQ+LEVVLAKP
Sbjct: 301 LFRRHGEVTKVVMPPGKAG-GKRDFGFIHYAERSSALKAVKDTEKYEIDGQMLEVVLAKP 360

Query: 361 QSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLG-GYGVTAGFHQPMIYGRGPMPA 420
           Q+DKK DG Y++  G +PNH+ H  YG + GNPYGSLG GYGV AG+ QPMIYGRGPMPA
Sbjct: 361 QADKKPDGGYAYNPGLHPNHVPHPAYGNFSGNPYGSLGAGYGVAAGYQQPMIYGRGPMPA 420

Query: 421 GMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGR-SGGSSSSDDVNRGR 480
           GMQMVPM+LPDGRIGYVLQQPGV +PP+R RR++RSNG  G  GR  GG+S +D+ NR R
Sbjct: 421 GMQMVPMMLPDGRIGYVLQQPGVQVPPARPRRNDRSNGPSGQPGRGGGGASGNDEGNRSR 480

Query: 481 RYRPY 483
           RYRPY
Sbjct: 481 RYRPY 483

BLAST of Cucsa.259640 vs. TrEMBL
Match: V7AZJ8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G257300g PE=4 SV=1)

HSP 1 Score: 696.8 bits (1797), Expect = 1.8e-197
Identity = 344/492 (69.92%), Postives = 408/492 (82.93%), Query Frame = 1

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
           M++G+E++ERVDL+E+N+MEEMDDDVEE +D+DGVD    E  E  VEE  E      + 
Sbjct: 1   MSEGAEIDERVDLDEENFMEEMDDDVEEQIDDDGVDGGEDENAEGSVEEHDEYEDSTAEV 60

Query: 61  EDKF---SDDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVL 120
             K      ++++++ E  ++ +K S  +DED+ EKH +LLALPPHGSEVFIGGL RDV 
Sbjct: 61  GGKDHLPEAEKSDIATEFGDDDQKPS-FIDEDEKEKHDELLALPPHGSEVFIGGLPRDVC 120

Query: 121 EEDLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTI 180
           E+DLRD+CE +G+I E+R++KD+D+GE+KGYAF+AFKTKE AQKAIE++H +E K GKT+
Sbjct: 121 EDDLRDLCEPVGDILEVRLMKDRDTGENKGYAFVAFKTKEVAQKAIEEIHSREFK-GKTL 180

Query: 181 RCSLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYY 240
           RCSLS++KHRLFIGNVPK+WT+D+FR++IEGVGPGVENIELIKDPQNP+RNRGFAFVLYY
Sbjct: 181 RCSLSETKHRLFIGNVPKTWTEDDFRKVIEGVGPGVENIELIKDPQNPSRNRGFAFVLYY 240

Query: 241 NNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQL 300
           NNACADYSRQKMSSA+FKLDGN+PTV+WADPK+ PD+SA++QVKALYVKNIPEN TT+QL
Sbjct: 241 NNACADYSRQKMSSASFKLDGNTPTVTWADPKNSPDHSASSQVKALYVKNIPENVTTDQL 300

Query: 301 KELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLA 360
           KELF++HGEVTKV MPPGKAG  KRDF FIHYAERSSALKAVKETEKYEI+GQLLEVVLA
Sbjct: 301 KELFRRHGEVTKVVMPPGKAG-GKRDFGFIHYAERSSALKAVKETEKYEIDGQLLEVVLA 360

Query: 361 KPQSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLG-GYGVTAGFHQPMIYGRGPM 420
           KPQ+DKK DG Y +  G + NHL H  YG + GNPYGSLG GYGV  G+ QPMIYGRGPM
Sbjct: 361 KPQADKKPDGGYGYNPGLHSNHLPHPAYGNFSGNPYGSLGAGYGVGGGYQQPMIYGRGPM 420

Query: 421 PAGMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGR------SGGSSSS 480
           PAGMQMVPMVLPDGRIGYVLQQPGV  PPSR RR ERSNG  G  GR       GG S +
Sbjct: 421 PAGMQMVPMVLPDGRIGYVLQQPGVQAPPSRPRRIERSNGPSGQPGRGGGGGGGGGGSGN 480

Query: 481 DDVNRGRRYRPY 483
           D+ NR RRYRPY
Sbjct: 481 DEGNRSRRYRPY 489

BLAST of Cucsa.259640 vs. TrEMBL
Match: A0A0S3RI95_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G335800 PE=4 SV=1)

HSP 1 Score: 695.3 bits (1793), Expect = 5.3e-197
Identity = 337/484 (69.63%), Postives = 405/484 (83.68%), Query Frame = 1

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVS-EEPQVGTD 60
           M++G+E++ERVDL+E+N+MEE+DDDVEE +D+DGVD    E  E  VEE   E+      
Sbjct: 1   MSEGAEIDERVDLDEENFMEEIDDDVEEQIDDDGVDGGEDENAEGSVEEHEYEDSTADVG 60

Query: 61  TEDKFSDDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
            +D+  +   +       + ++  S +DED+ EKH +LLALPPHGSEVFIGGL RDV E+
Sbjct: 61  EKDQLPEAEKSDIATEFGDDDQKPSFIDEDEKEKHNELLALPPHGSEVFIGGLPRDVCED 120

Query: 121 DLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180
           DLRD+CE +G+I E+R++KD+D+GE+KGYAF+AFKTKE AQKAIE++H +E K GKT+RC
Sbjct: 121 DLRDLCEPMGDILEVRLMKDRDTGENKGYAFVAFKTKEVAQKAIEEIHSREFK-GKTLRC 180

Query: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240
           SLS++KHRLFIGNVPK+WT+D+FR++IEGVGPGVENIELIKDPQNP+RNRGFAFVLYYNN
Sbjct: 181 SLSETKHRLFIGNVPKTWTEDDFRKVIEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNN 240

Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKE 300
           ACADYSRQKMS+A+FKLDGN+PTV+WADPK+ PD+SA++QVKALYVKNIPEN TTEQLKE
Sbjct: 241 ACADYSRQKMSNASFKLDGNTPTVTWADPKNSPDHSASSQVKALYVKNIPENVTTEQLKE 300

Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
           LF++HGEVTKV MPPGKAG  KRDF FIHYAERSSALKAVK+TEKYEI+GQ+LEVVLAKP
Sbjct: 301 LFRRHGEVTKVVMPPGKAG-GKRDFGFIHYAERSSALKAVKDTEKYEIDGQVLEVVLAKP 360

Query: 361 QSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLG-GYGVTAGFHQPMIYGRGPMPA 420
           Q+DKK DG Y +  G +P+HL H  YG + GNPYGSLG GYGV  G+ QPMIYGRGPMPA
Sbjct: 361 QADKKPDGGYGYNPGLHPSHLPHPAYGNFSGNPYGSLGAGYGVGGGYQQPMIYGRGPMPA 420

Query: 421 GMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRR 480
           GMQMVPMVLPDGRIGYVLQQPGV  PPSR RR++RSNG  G  GR  G S +D+ NR RR
Sbjct: 421 GMQMVPMVLPDGRIGYVLQQPGVQAPPSRPRRTDRSNGPSGQPGR--GGSGNDEGNRSRR 480

Query: 481 YRPY 483
           YRPY
Sbjct: 481 YRPY 480

BLAST of Cucsa.259640 vs. TAIR10
Match: AT4G00830.1 (AT4G00830.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 611.7 bits (1576), Expect = 3.9e-175
Identity = 315/501 (62.87%), Postives = 392/501 (78.24%), Query Frame = 1

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDV-EEVSEEPQV--- 60
           M+D  + ++RVD EE +Y  EM+D+VEE   E+  +    +  ++DV  + +EE +V   
Sbjct: 1   MSDARDNDDRVDFEEGSY-SEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDY 60

Query: 61  ----GTDTEDK----FSDDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVF 120
               G D ED       DD N++ +E+ ++ EK  S +D++D EK++ LL+LPPHGSEVF
Sbjct: 61  GDTKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVF 120

Query: 121 IGGLSRDVLEEDLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHG 180
           IGGL RDV EEDLRD+CE +GEIFE+R++KD+DSG+SKGYAF+AFKTK+ AQKAIE+LH 
Sbjct: 121 IGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHS 180

Query: 181 KEVKVGKTIRCSLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRN 240
           KE K GKTIRCSLS++K+RLFIGN+PK+WT+DEFR++IE VGPGVENIELIKDP N  RN
Sbjct: 181 KEFK-GKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRN 240

Query: 241 RGFAFVLYYNNACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNS-AAAQVKALYVKN 300
           RGFAFVLYYNNACADYSRQKM  +NFKL+GN+PTV+WADPKS P++S AAAQVKALYVKN
Sbjct: 241 RGFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKN 300

Query: 301 IPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEI 360
           IPENT+TEQLKELFQ+HGEVTK+  PPGK G  KRDF F+HYAERSSALKAVK+TE+YE+
Sbjct: 301 IPENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEV 360

Query: 361 EGQLLEVVLAKPQSDKKSD-GAYSHISGSYPNHLLHGGYGGYGGNPYGSLG-GYGVTAGF 420
            GQ LEVVLAKPQ+++K D  +YS+ +   P   +H  +GG+   PYG++G G G+   F
Sbjct: 361 NGQPLEVVLAKPQAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSF 420

Query: 421 HQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVPM---PPSRSRRSERSNGSGGTMG 480
            QPMIYGRG MP GMQMVPM+LPDGR+GYVLQQPG+PM   PP R RR++R+NGS G  G
Sbjct: 421 SQPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSG 480

Query: 481 RSGGSSSSDDVNR-GRRYRPY 483
           R   +S   D NR GRRYRPY
Sbjct: 481 RD--NSHEHDGNRGGRRYRPY 495

BLAST of Cucsa.259640 vs. TAIR10
Match: AT3G52660.1 (AT3G52660.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 428.7 bits (1101), Expect = 4.7e-120
Identity = 219/488 (44.88%), Postives = 324/488 (66.39%), Query Frame = 1

Query: 3   DGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDTED 62
           D  E EERVDL+ DN  EE+   +EE V+ +       E+ EE++EE+ EE +       
Sbjct: 13  DSMESEERVDLDGDNDPEEI---LEEEVEYE-------EVEEEEIEEIEEEIE------- 72

Query: 63  KFSDDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEEDLR 122
                   + VE  E  E + +  +E++ ++H +LLALPPHGSEV++GG+  D  E DL+
Sbjct: 73  ------EEVEVEEEEEEEDAVATEEEEEKKRHVELLALPPHGSEVYLGGIPTDATEGDLK 132

Query: 123 DMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRCSLS 182
             C S+GE+ E+RI+++KDSG+ KGYAF+ F++K+ A +AI+ L+  + + GK I+CS +
Sbjct: 133 GFCGSIGEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTLNNTDFR-GKRIKCSTT 192

Query: 183 DSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNACA 242
            +KHRLF+GNVP++W + + ++    +GPGV+ +EL K+PQN  RNRGFAF+ YYN+ACA
Sbjct: 193 QAKHRLFLGNVPRNWMESDIKKAANRIGPGVQIVELPKEPQNMGRNRGFAFIEYYNHACA 252

Query: 243 DYSRQKMSSANFKLDGNSPTVSWADPKS-MPDNSAAAQVKALYVKNIPENTTTEQLKELF 302
           +YS+QKMS+ +FKLD N+PTVSWA+ +S    +S+A+QVKALY+KN+P + T E+LK LF
Sbjct: 253 EYSKQKMSNPSFKLDDNAPTVSWAESRSGGGGDSSASQVKALYIKNLPRDITQERLKALF 312

Query: 303 QQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQS 362
           + HG++ KV +PP K G     + F+HYAER+S ++A+K TE+YEI+G +L+  LAKPQ+
Sbjct: 313 EHHGKILKVVIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEIDGHMLDCTLAKPQA 372

Query: 363 DKKSDG------AYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGP 422
           D+K++         S +  +YP  L +    G   +P+G+LGG+G +A + QP+++  G 
Sbjct: 373 DQKTNTNTVQNVQKSQLQPNYPPLLSY----GMAPSPFGALGGFGASA-YSQPLMHAGGH 432

Query: 423 MPAGMQMVPMVLPDGRIGYVLQQPGV-PMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVN 482
              GM M+P++LPDGRIGYVLQQPG+  MP    R S    G  G+   SG   SSD+  
Sbjct: 433 AAGGMSMMPIMLPDGRIGYVLQQPGLAAMPQPPPRHSPPYRGGSGSSSSSGSKRSSDNGR 471

BLAST of Cucsa.259640 vs. TAIR10
Match: AT5G28390.1 (AT5G28390.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 147.5 bits (371), Expect = 2.1e-35
Identity = 93/239 (38.91%), Postives = 125/239 (52.30%), Query Frame = 1

Query: 249 MSSANFKLDGNSPTVSWADPKSMPD-NSAAAQVKALYVKNIPENTTTEQLKELFQQHGEV 308
           MS+ +FKLD N+PTVSWA+ +S  + +S+A+QVKALY+KN+P + T E+LK LF+ HG++
Sbjct: 1   MSNPSFKLDDNAPTVSWAESRSGGEGDSSASQVKALYIKNLPRDITQERLKALFEHHGKI 60

Query: 309 TKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQSDKKSDG 368
            KV +PP K G     + F+HYAER+S ++A+K TE+YEI+                   
Sbjct: 61  LKVVIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEID------------------- 120

Query: 369 AYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGMQMVPMVL 428
                + +Y   L+H G    GG                               M+P++L
Sbjct: 121 -----ASAYSQPLMHAGGHAAGGM-----------------------------SMMPIML 180

Query: 429 PDGRIGYVLQQPG---VPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGR-RYRPY 483
           PDGRI YVLQQPG   +P PP R     R  GSG     S  S  S D  RGR RY PY
Sbjct: 181 PDGRIRYVLQQPGLAAMPQPPPRPSPPYR-GGSG-----SSSSKQSSDNGRGRSRYNPY 180

BLAST of Cucsa.259640 vs. TAIR10
Match: AT2G44710.1 (AT2G44710.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 142.1 bits (357), Expect = 8.8e-34
Identity = 95/359 (26.46%), Postives = 185/359 (51.53%), Query Frame = 1

Query: 8   EERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEE-----------PQV 67
           +ER+DL+++    E ++   E  +E  + +   EL  E+ EE+ EE            ++
Sbjct: 108 DERLDLDDNEPEYEAEEYGGEEFEERELGQEDHELVNEEGEELEEEIEVEEEAGEFADEI 167

Query: 68  GTDTEDKFS-DDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGS-EVFIGGLSR 127
           G   ED  S DD ++ ++E +++ E     +D ++ E H  L         E+F+G L +
Sbjct: 168 GDGAEDLDSEDDDDDHAIEEVKHGET----VDVEEEEHHDVLHERRKRKEFEIFVGSLDK 227

Query: 128 DVLEEDLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVG 187
              EEDL+ +   +GE+ E+RI+K+  + +SKG AF+ F T E A++A+++L    +  G
Sbjct: 228 GASEEDLKKVFGHVGEVTEVRILKNPQTKKSKGSAFLRFATVEQAKRAVKELKSPMIN-G 287

Query: 188 KTIRCSLSDSKHRLFIGNVPKSWTDDEFRRLIEGVG-PGVENIELIKDPQNPNRNRGFAF 247
           K    + S     LF+GN+ K WT +  R  ++  G   +++I L++D  N N NRG+AF
Sbjct: 288 KKCGVTASQDNDTLFVGNICKIWTPEALREKLKHYGVENMDDITLVEDSNNVNMNRGYAF 347

Query: 248 VLYYNNACADYSRQKMSSANFKLDGNSPT-VSWADPKSMPDNSAAAQVKALYVKNIPENT 307
           + + + + A  + +++   +       P  VS+ D     ++   AQVK +++  +  + 
Sbjct: 348 LEFSSRSDAMDAHKRLVKKDVMFGVEKPAKVSFTDSFLDLEDEIMAQVKTIFIDGLLPSW 407

Query: 308 TTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEI-EGQ 351
             E++++L + +G++ KV +      + ++DF F+ +    +A+   K     E+ EG+
Sbjct: 408 NEERVRDLLKPYGKLEKVELARNMPSARRKDFGFVTFDTHEAAVSCAKFINNSELGEGE 461

BLAST of Cucsa.259640 vs. TAIR10
Match: AT4G34110.1 (AT4G34110.1 poly(A) binding protein 2)

HSP 1 Score: 98.2 bits (243), Expect = 1.5e-20
Identity = 82/283 (28.98%), Postives = 135/283 (47.70%), Query Frame = 1

Query: 107 VFIGGLSRDVLEEDLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDL 166
           +FI  L   +  + L D   S G I   ++  D  SG+SKGY F+ +  +E+AQKAIE L
Sbjct: 126 IFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDS-SGQSKGYGFVQYANEESAQKAIEKL 185

Query: 167 HG-----KEVKVGKTIRCSLSDSK------HRLFIGNVPKSWTDDEFRRLIEGVGPGVEN 226
           +G     K+V VG  +R    DS         +++ N+ +S TDD+ +      G  + +
Sbjct: 186 NGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGK-ITS 245

Query: 227 IELIKDPQNPNRNRGFAFVLYYNNACADYSRQKMSSAN-FKLDGNSPTVSWADPKS---- 286
             ++KD +   +++GF FV + N   AD + + + S N  K D     V  A  KS    
Sbjct: 246 AVVMKDGE--GKSKGFGFVNFEN---ADDAARAVESLNGHKFDDKEWYVGRAQKKSERET 305

Query: 287 ---------MPDNSAAAQVKALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSK 346
                    + + +   Q   LYVKN+  + + E+LKE+F   G VT   +     G+SK
Sbjct: 306 ELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSK 365

Query: 347 RDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQSDKK 365
               F+ +A    A +A+ +     IE + L V +A+ + D++
Sbjct: 366 GS-GFVAFATPEEATEAMSQLSGKMIESKPLYVAIAQRKEDRR 400


HSP 2 Score: 75.5 bits (184), Expect = 1.0e-13
Identity = 61/271 (22.51%), Postives = 127/271 (46.86%), Query Frame = 1

Query: 105 SEVFIGGLSRDVLEEDLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIE 164
           + +++G L  +V +  L D    +G +  +R+ +D  +  S GY ++ F   + A +AI+
Sbjct: 36  TSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQ 95

Query: 165 D-----LHGKEVKVGKTIR--CSLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIE 224
           +     L+GK ++V  + R           +FI N+ +S             G  + + +
Sbjct: 96  ELNYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFG-NIVSCK 155

Query: 225 LIKDPQNPNRNRGFAFVLYYNNACADYSRQKMSS--ANFKLDGNSPTVSWADPKSMPDNS 284
           +  D  +  +++G+ FV Y N   A  + +K++    N K     P +   +  S  + +
Sbjct: 156 VAVD--SSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRRQERDSTANKT 215

Query: 285 AAAQVKALYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSA 344
               V   YVKN+ E+TT + LK  F ++G++T   +     G SK  F F+++     A
Sbjct: 216 KFTNV---YVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSK-GFGFVNFENADDA 275

Query: 345 LKAVKETEKYEIEGQLLEVVLAKPQSDKKSD 367
            +AV+    ++ + +   V  A+ +S+++++
Sbjct: 276 ARAVESLNGHKFDDKEWYVGRAQKKSERETE 299

BLAST of Cucsa.259640 vs. NCBI nr
Match: gi|778676745|ref|XP_011650655.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X1 [Cucumis sativus])

HSP 1 Score: 976.9 bits (2524), Expect = 1.3e-281
Identity = 482/482 (100.00%), Postives = 482/482 (100.00%), Query Frame = 1

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
           MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT
Sbjct: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFSDDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEED 120
           EDKFSDDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEED
Sbjct: 61  EDKFSDDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEED 120

Query: 121 LRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRCS 180
           LRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRCS
Sbjct: 121 LRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRCS 180

Query: 181 LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA 240

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL 300
           CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
           FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360

Query: 361 SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGM 420
           SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYR 480
           QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYR 480

Query: 481 PY 483
           PY
Sbjct: 481 PY 482

BLAST of Cucsa.259640 vs. NCBI nr
Match: gi|449431998|ref|XP_004133787.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X2 [Cucumis sativus])

HSP 1 Score: 970.7 bits (2508), Expect = 9.5e-280
Identity = 481/482 (99.79%), Postives = 481/482 (99.79%), Query Frame = 1

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
           MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT
Sbjct: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFSDDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEED 120
           EDKFSDDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEED
Sbjct: 61  EDKFSDDRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEED 120

Query: 121 LRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRCS 180
           LRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVK GKTIRCS
Sbjct: 121 LRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVK-GKTIRCS 180

Query: 181 LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA 240
           LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA
Sbjct: 181 LSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNNA 240

Query: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL 300
           CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL
Sbjct: 241 CADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKEL 300

Query: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360
           FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ
Sbjct: 301 FQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 360

Query: 361 SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGM 420
           SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGM
Sbjct: 361 SDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAGM 420

Query: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYR 480
           QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYR
Sbjct: 421 QMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRYR 480

Query: 481 PY 483
           PY
Sbjct: 481 PY 481

BLAST of Cucsa.259640 vs. NCBI nr
Match: gi|659074847|ref|XP_008437829.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X1 [Cucumis melo])

HSP 1 Score: 961.1 bits (2483), Expect = 7.5e-277
Identity = 475/483 (98.34%), Postives = 480/483 (99.38%), Query Frame = 1

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
           MAD SEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT
Sbjct: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFSDD-RNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
           EDKFS D RNNLSVESIENREKS+SLLDED+LEKHAQLLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180
           DLR+MCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180

Query: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240
           SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN
Sbjct: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240

Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKE 300
           ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDN+AAAQVKALYVKNIPENTTTEQLKE
Sbjct: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE 300

Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
           LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP
Sbjct: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360

Query: 361 QSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAG 420
           QSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGS+GGYGVTAGFHQPMIYGRGPMPAG
Sbjct: 361 QSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSIGGYGVTAGFHQPMIYGRGPMPAG 420

Query: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRY 480
           MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRY
Sbjct: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRY 480

Query: 481 RPY 483
           RPY
Sbjct: 481 RPY 483

BLAST of Cucsa.259640 vs. NCBI nr
Match: gi|659074851|ref|XP_008437831.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X2 [Cucumis melo])

HSP 1 Score: 954.9 bits (2467), Expect = 5.4e-275
Identity = 474/483 (98.14%), Postives = 479/483 (99.17%), Query Frame = 1

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
           MAD SEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT
Sbjct: 1   MADASEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60

Query: 61  EDKFSDD-RNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
           EDKFS D RNNLSVESIENREKS+SLLDED+LEKHAQLLALPPHGSEVFIGGLSRDVLEE
Sbjct: 61  EDKFSGDGRNNLSVESIENREKSASLLDEDELEKHAQLLALPPHGSEVFIGGLSRDVLEE 120

Query: 121 DLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180
           DLR+MCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVK GKTIRC
Sbjct: 121 DLREMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVK-GKTIRC 180

Query: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240
           SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN
Sbjct: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240

Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKE 300
           ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDN+AAAQVKALYVKNIPENTTTEQLKE
Sbjct: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNTAAAQVKALYVKNIPENTTTEQLKE 300

Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
           LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP
Sbjct: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360

Query: 361 QSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLGGYGVTAGFHQPMIYGRGPMPAG 420
           QSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGS+GGYGVTAGFHQPMIYGRGPMPAG
Sbjct: 361 QSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSIGGYGVTAGFHQPMIYGRGPMPAG 420

Query: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRY 480
           MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRY
Sbjct: 421 MQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRRY 480

Query: 481 RPY 483
           RPY
Sbjct: 481 RPY 482

BLAST of Cucsa.259640 vs. NCBI nr
Match: gi|225453602|ref|XP_002264834.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein R [Vitis vinifera])

HSP 1 Score: 709.5 bits (1830), Expect = 3.9e-201
Identity = 354/484 (73.14%), Postives = 412/484 (85.12%), Query Frame = 1

Query: 1   MADGSEVEERVDLEEDNYMEEMDDDVEEHVDEDGVDRRAGELPEEDVEEVSEEPQVGTDT 60
           MA+G+EVE+RVDL++DNYMEEMDDDVEE + EDGV+       +E+VEE  E+ + G   
Sbjct: 1   MAEGTEVEDRVDLDDDNYMEEMDDDVEEQI-EDGVEGGG----DENVEEEYEDSKAGGSG 60

Query: 61  EDKFSD-DRNNLSVESIENREKSSSLLDEDDLEKHAQLLALPPHGSEVFIGGLSRDVLEE 120
           ED+  + D + ++ E +++ E  ++ +DED+ EKHAQLLALPPHGSE+FIGGL R+ LEE
Sbjct: 61  EDQLLEVDESRIANEPLKDEENPTASVDEDEKEKHAQLLALPPHGSEIFIGGLPREALEE 120

Query: 121 DLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIEDLHGKEVKVGKTIRC 180
           DLRD+CE +GE  E+R++K++DSGESKGYAFI+FKTKE AQKAIE+LH KE K G+TIRC
Sbjct: 121 DLRDLCEPIGEALEVRLMKNRDSGESKGYAFISFKTKEIAQKAIEELHSKEFK-GRTIRC 180

Query: 181 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 240
           SLS+SKHRLFIGNVPKSWTDDEFR++IE +GPG ENIELIKDPQNP+RNRGFAFV YYNN
Sbjct: 181 SLSESKHRLFIGNVPKSWTDDEFRKVIEDIGPGAENIELIKDPQNPSRNRGFAFVEYYNN 240

Query: 241 ACADYSRQKMSSANFKLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKE 300
           ACADY RQKMSS+NFKLDGN+PTVSWADPKS  D+SAAAQVKALYVKNIPENTTTEQLKE
Sbjct: 241 ACADYGRQKMSSSNFKLDGNTPTVSWADPKSTSDHSAAAQVKALYVKNIPENTTTEQLKE 300

Query: 301 LFQQHGEVTKVNMPPGKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKP 360
           LFQ+HGEVTKV MPP K+G SKRDF FIH+AERSSALKAVK+TEK+EI+GQ L+V LAKP
Sbjct: 301 LFQRHGEVTKVVMPPAKSGQSKRDFGFIHFAERSSALKAVKDTEKHEIDGQALDVSLAKP 360

Query: 361 QSDKKSDGAYSHISGSYPNHLLHGGYGGYGGNPYGSLG-GYGVTAGFHQPMIYGRGPMPA 420
           QSDKK +G + + SG +PN L H GYGG+GGNPYGSLG GYGV+A F QP+IYGRGPMPA
Sbjct: 361 QSDKKFEGVHPYSSG-HPNFLPHPGYGGFGGNPYGSLGPGYGVSAPFQQPVIYGRGPMPA 420

Query: 421 GMQMVPMVLPDGRIGYVLQQPGVPMPPSRSRRSERSNGSGGTMGRSGGSSSSDDVNRGRR 480
           GM MVPMVLPDGRIGYVLQQPGV MPP R RR+ERSNGS G  GR GGSS S D NR RR
Sbjct: 421 GMHMVPMVLPDGRIGYVLQQPGVQMPPPRPRRNERSNGSSGQQGR-GGSSGSGDDNRSRR 476

Query: 481 YRPY 483
           YRPY
Sbjct: 481 YRPY 476

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
HNRPR_HUMAN1.4e-5232.30Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens GN=HNRNPR PE=1 SV=1[more]
HNRPQ_HUMAN3.5e-4833.33Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens GN=SYNCRIP PE=1 SV=2[more]
HNRPQ_MOUSE4.5e-4833.33Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus GN=Syncrip PE=1 SV=2[more]
HNRPQ_RAT4.5e-4833.33Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus GN=Syncrip PE=2 S... [more]
A1CF_HUMAN4.1e-4132.92APOBEC1 complementation factor OS=Homo sapiens GN=A1CF PE=1 SV=1[more]
Match NameE-valueIdentityDescription
D7U819_VITVI2.7e-20173.14Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02700 PE=4 SV=... [more]
M5XJC0_PRUPE1.2e-19971.52Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004918mg PE=4 SV=1[more]
I1JS33_SOYBN4.8e-19869.48Uncharacterized protein OS=Glycine max GN=GLYMA_03G260500 PE=4 SV=1[more]
V7AZJ8_PHAVU1.8e-19769.92Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G257300g PE=4 SV=1[more]
A0A0S3RI95_PHAAN5.3e-19769.63Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G335800 PE=... [more]
Match NameE-valueIdentityDescription
AT4G00830.13.9e-17562.87 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT3G52660.14.7e-12044.88 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT5G28390.12.1e-3538.91 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT2G44710.18.8e-3426.46 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT4G34110.11.5e-2028.98 poly(A) binding protein 2[more]
Match NameE-valueIdentityDescription
gi|778676745|ref|XP_011650655.1|1.3e-281100.00PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X1 [Cucumis sativus... [more]
gi|449431998|ref|XP_004133787.1|9.5e-28099.79PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X2 [Cucumis sativus... [more]
gi|659074847|ref|XP_008437829.1|7.5e-27798.34PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X1 [Cucumis melo][more]
gi|659074851|ref|XP_008437831.1|5.4e-27598.14PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X2 [Cucumis melo][more]
gi|225453602|ref|XP_002264834.1|3.9e-20173.14PREDICTED: heterogeneous nuclear ribonucleoprotein R [Vitis vinifera][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR003954RRM_dom_euk
IPR012677Nucleotide-bd_a/b_plait_sf
IPR000504RRM_dom
IPR003954RRM_dom_euk
IPR012677Nucleotide-bd_a/b_plait_sf
IPR000504RRM_dom
IPR003954RRM_dom_euk
IPR012677Nucleotide-bd_a/b_plait_sf
IPR000504RRM_dom
IPR003954RRM_dom_euk
IPR012677Nucleotide-bd_a/b_plait_sf
IPR000504RRM_dom
IPR003954RRM_dom_euk
IPR012677Nucleotide-bd_a/b_plait_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0030529 intracellular ribonucleoprotein complex
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.259640.6Cucsa.259640.6mRNA
Cucsa.259640.5Cucsa.259640.5mRNA
Cucsa.259640.4Cucsa.259640.4mRNA
Cucsa.259640.3Cucsa.259640.3mRNA
Cucsa.259640.1Cucsa.259640.1mRNA


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 187..253
score: 1.9E-9coord: 107..177
score: 8.9E-21coord: 278..327
score: 4.
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 186..263
score: 2.3E-11coord: 106..179
score: 1.2E-26coord: 267..330
score:
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 251..334
score: 8.603coord: 185..267
score: 12.373coord: 105..183
score: 20
IPR003954RNA recognition motif domain, eukaryoteSMARTSM00361rrm2_1coord: 106..179
score: 2.
IPR012677Nucleotide-binding alpha-beta plait domainGENE3DG3DSA:3.30.70.330coord: 78..184
score: 7.7E-28coord: 277..343
score: 5.9E-11coord: 185..269
score: 1.1
IPR012677Nucleotide-binding alpha-beta plait domainunknownSSF54928RNA-binding domain, RBDcoord: 102..185
score: 6.99E-27coord: 185..338
score: 1.28
NoneNo IPR availablePANTHERPTHR24012FAMILY NOT NAMEDcoord: 102..229
score: 2.9E-180coord: 262..455
score: 2.9E-180coord: 7..25
score: 2.9E
NoneNo IPR availablePANTHERPTHR24012:SF479RNA RECOGNITION MOTIF-CONTAINING PROTEINcoord: 102..229
score: 2.9E-180coord: 7..25
score: 2.9E-180coord: 262..455
score: 2.9E