Lsi03G007230 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi03G007230
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr03 : 9670444 .. 9671762 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTGTGGAGTTATTGGCAATGTGAACCATGAGACAAAGGATGGAAAGAAGGGTAATGTGTGGATCACATGGACACCAATTCCCAACGTTGAAGATCTGCTTGTGAAAATCATTGCAGAGTTCGCAGTGGCAGAATACAATAAGAAATACAAAAAGCAATGGAAATGTAAGCGCATTCAACAAGCTTGGTACTCAGTGATAATAGAGGAGAATCAAACTCAATATCGTTTCCATTTAGAGCAAGATGAAGTTCCTGAAGGAGATGAGAAAATATAAGAGGCTGTTGTGTCAGGAGTCCAATCACATGATTTGCCTTTTCTACTAATTAAAATGGATCTTATACTTGTCATGCCATATTTCAATTATTGATCTAACTTTCTAGCTCTTGTATTCTACAATAATAATAATACTCTCTACATCACTTATGGTGTAGTGAGTTTGAGATTATCTATATCTAAATTATAGAATTATAAATAAAAGCTATACTTTGAATACTAATGTTCATGTTAATGACGTATGTTGGGAGGGGTAAGTTCGTCGAGAAAAATGTCTGAATTTCTTGTAGTGTCATAGTATGTACTTGTCTACGTTTTTTTTAATAATATTCTATTTTTGTAGTTGTTTAAAAGGATTACTATTACTTTAGGCCCCGTTTGGTAACCATTTGGTTTTTAGTTCTTAAAAATTAAGCATACAAACAGCCCTCTCACCCTTAAATGTCTTGCTTTCTTATCTACTTTTTATCTATGTTTTCAAAAATCAAGCCAAATTTTAAAAACTAAAAAAAATAGATTTTAAAAACTTTTTTATTTTTCAAATTTGGTTAAGAATTCAACTCTTGTACTTAGGGGTGTGCATGGTTTGGTTCAGTTCGGTTTGGGCAAAACTAAGAACTAAATCGAATTTATCTAAAATCGGCTAGGCTCGATTTTAGTTTCTAAACTGGACCGATTTGATTCGGTTCAGGTCGGTTCGGTTCGATTAAAATCGAATTTAGGTCATTTTTTCAAACAAAAAAGAAGAACACTTATGTAGATTTTTTGAAAAAGGAAAAAAATAATTCTAAAAAAAAAAACCTTCGGTGGTGGATTGTGCTTAGTCGGTCTAGTTTGGTGAGGTGAAGGAGGTGAAATTTGAACTGGAGCAGATCTGGTCTGTGTGGTGTCGAACTCGTGTAGCTGGAGAAGGTGAAAATGAAGGTGAAGGTGGAGCCGGTCGGAGGAGGTGGTGTGGAACTCGTGGAGCCGGTCGCCAATAATCTTCACGACTCAAGGTTGAAGGTGAAACTAGCGACCGACGTGCGTGCTGAGGGTTGA

mRNA sequence

ATGAGTTGTGGAGTTATTGGCAATGTGAACCATGAGACAAAGGATGGAAAGAAGGGTAATGTGTGGATCACATGGACACCAATTCCCAACGTTGAAGATCTGCTTGTGAAAATCATTGCAGAGTTCGCAGTGGCAGAATACAATAAGAAATACAAAAAGCAATGGAAATGTAAGCGCATTCAACAAGCTTGGTACTCAGTGATAATAGAGGAGAATCAAACTCAATATCGTTTCCATTTAGAGCAAGATGAACTGGAGAAGGTGAAAATGAAGGTGAAGGTGGAGCCGGTCGGAGGAGGTGGTGTGGAACTCGTGGAGCCGGTCGCCAATAATCTTCACGACTCAAGGTTGAAGGTGAAACTAGCGACCGACGTGCGTGCTGAGGGTTGA

Coding sequence (CDS)

ATGAGTTGTGGAGTTATTGGCAATGTGAACCATGAGACAAAGGATGGAAAGAAGGGTAATGTGTGGATCACATGGACACCAATTCCCAACGTTGAAGATCTGCTTGTGAAAATCATTGCAGAGTTCGCAGTGGCAGAATACAATAAGAAATACAAAAAGCAATGGAAATGTAAGCGCATTCAACAAGCTTGGTACTCAGTGATAATAGAGGAGAATCAAACTCAATATCGTTTCCATTTAGAGCAAGATGAACTGGAGAAGGTGAAAATGAAGGTGAAGGTGGAGCCGGTCGGAGGAGGTGGTGTGGAACTCGTGGAGCCGGTCGCCAATAATCTTCACGACTCAAGGTTGAAGGTGAAACTAGCGACCGACGTGCGTGCTGAGGGTTGA

Protein sequence

MSCGVIGNVNHETKDGKKGNVWITWTPIPNVEDLLVKIIAEFAVAEYNKKYKKQWKCKRIQQAWYSVIIEENQTQYRFHLEQDELEKVKMKVKVEPVGGGGVELVEPVANNLHDSRLKVKLATDVRAEG
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0004869 cysteine-type endopeptidase inhibitor activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G007230.1Lsi03G007230.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.10.450.10coord: 25..92
score: 2.
NoneNo IPR availableunknownSSF54403Cystatin/monellincoord: 25..84
score: 1.9

The following gene(s) are paralogous to this gene:

None