ClCG09G015870 (gene) Watermelon (Charleston Gray)

NameClCG09G015870
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr09 : 30870760 .. 30871131 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTGTGGAGCGATTTCCAATACCAACCATGAGTTAAAGGATCCAAAGAAGGGTTATGTGTGGATCACATGGACACCAATTCCCAACCTTGGAGATCCATTTGTGAAAATCATTGCAGAGTTCGCAGTAGAAGAATACAATAAGAAATACAAGAAGCAATGGAAATGCAAGGGCATTCAACAAGGTTGGTACACAGTGATGGAGAATAATCAAACTCAATATCGTTTCCATTTACAGCAAGATGAAGTTCCTGAAGGAGATGAGAACATATATGAGGCTGTTGTGTCAGGTTCAGTCCAATCACATGATTTGCCTTTTCTACTGATGAACAAGAATCTCATACTTTTCATGCCATACTTCAATTATTGA

mRNA sequence

ATGAGTTGTGGAGCGATTTCCAATACCAACCATGAGTTAAAGGATCCAAAGAAGGGTTATGTGTGGATCACATGGACACCAATTCCCAACCTTGGAGATCCATTTGTGAAAATCATTGCAGAGTTCGCAGTAGAAGAATACAATAAGAAATACAAGAAGCAATGGAAATGCAAGGGCATTCAACAAGGTTGGTACACAGTGATGGAGAATAATCAAACTCAATATCGTTTCCATTTACAGCAAGATGAAGTTCCTGAAGGAGATGAGAACATATATGAGGCTGTTGTGTCAGGTTCAGTCCAATCACATGATTTGCCTTTTCTACTGATGAACAAGAATCTCATACTTTTCATGCCATACTTCAATTATTGA

Coding sequence (CDS)

ATGAGTTGTGGAGCGATTTCCAATACCAACCATGAGTTAAAGGATCCAAAGAAGGGTTATGTGTGGATCACATGGACACCAATTCCCAACCTTGGAGATCCATTTGTGAAAATCATTGCAGAGTTCGCAGTAGAAGAATACAATAAGAAATACAAGAAGCAATGGAAATGCAAGGGCATTCAACAAGGTTGGTACACAGTGATGGAGAATAATCAAACTCAATATCGTTTCCATTTACAGCAAGATGAAGTTCCTGAAGGAGATGAGAACATATATGAGGCTGTTGTGTCAGGTTCAGTCCAATCACATGATTTGCCTTTTCTACTGATGAACAAGAATCTCATACTTTTCATGCCATACTTCAATTATTGA

Protein sequence

MSCGAISNTNHELKDPKKGYVWITWTPIPNLGDPFVKIIAEFAVEEYNKKYKKQWKCKGIQQGWYTVMENNQTQYRFHLQQDEVPEGDENIYEAVVSGSVQSHDLPFLLMNKNLILFMPYFNY
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR020381Proteinase inhibitor I25, cystatin, conserved region
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0010951 negative regulation of endopeptidase activity
biological_process GO:0010466 negative regulation of peptidase activity
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0004869 cysteine-type endopeptidase inhibitor activity
molecular_function GO:0030414 peptidase inhibitor activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG09G015870.1ClCG09G015870.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020381Proteinase inhibitor I25, cystatin, conserved regionPFAMPF16845SQAPIcoord: 28..100
score: 6.
NoneNo IPR availableGENE3DG3DSA:3.10.450.10coord: 25..96
score: 1.
NoneNo IPR availableunknownSSF54403Cystatin/monellincoord: 25..98
score: 3.7

The following gene(s) are paralogous to this gene:

None