CmaCh19G004720 (gene) Cucurbita maxima (Rimu)

NameCmaCh19G004720
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr19 : 5653712 .. 5654083 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTCAGGAGTTGGTGCTCATGCTGGTCAATCGAACCACATCAATCATGATATGATTGATGCAAAAAAGGGTTTTGTTTGGATCACATGGACATCAATTCCCAACGTTGAGGCGTCCTACGTGCAAGAAATCGCAAAGTTTGCCGTGGAAGAGTATAATAAAAAGTACAAAAAACAATGGAAATACAAGCGCATTCAACAAGGTTGGTACTCGGAGATGAAGGATGAGACTCAATATCGTTTCTTTTTAGAGCAGGACGATGTTCGTCCAGGAGATCAACAAGTATATCAAGCTATCGTGTCATTAAAATTCAATGGTTTTAACCTGATCAAGAATCTTATACTTTTCATGCCATACTTCAAATACTAA

mRNA sequence

ATGAGTTCAGGAGTTGGTGCTCATGCTGGTCAATCGAACCACATCAATCATGATATGATTGATGCAAAAAAGGGTTTTGTTTGGATCACATGGACATCAATTCCCAACGTTGAGGCGTCCTACGTGCAAGAAATCGCAAAGTTTGCCGTGGAAGAGTATAATAAAAAGTACAAAAAACAATGGAAATACAAGCGCATTCAACAAGGTTGGTACTCGGAGATGAAGGATGAGACTCAATATCGTTTCTTTTTAGAGCAGGACGATGTTCGTCCAGGAGATCAACAAGTATATCAAGCTATCGTGTCATTAAAATTCAATGGTTTTAACCTGATCAAGAATCTTATACTTTTCATGCCATACTTCAAATACTAA

Coding sequence (CDS)

ATGAGTTCAGGAGTTGGTGCTCATGCTGGTCAATCGAACCACATCAATCATGATATGATTGATGCAAAAAAGGGTTTTGTTTGGATCACATGGACATCAATTCCCAACGTTGAGGCGTCCTACGTGCAAGAAATCGCAAAGTTTGCCGTGGAAGAGTATAATAAAAAGTACAAAAAACAATGGAAATACAAGCGCATTCAACAAGGTTGGTACTCGGAGATGAAGGATGAGACTCAATATCGTTTCTTTTTAGAGCAGGACGATGTTCGTCCAGGAGATCAACAAGTATATCAAGCTATCGTGTCATTAAAATTCAATGGTTTTAACCTGATCAAGAATCTTATACTTTTCATGCCATACTTCAAATACTAA

Protein sequence

MSSGVGAHAGQSNHINHDMIDAKKGFVWITWTSIPNVEASYVQEIAKFAVEEYNKKYKKQWKYKRIQQGWYSEMKDETQYRFFLEQDDVRPGDQQVYQAIVSLKFNGFNLIKNLILFMPYFKY
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR020381Proteinase inhibitor I25, cystatin, conserved region
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh19G004720.1CmaCh19G004720.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020381Proteinase inhibitor I25, cystatin, conserved regionPFAMPF16845SQAPIcoord: 34..104
score: 1.0
NoneNo IPR availableGENE3DG3DSA:3.10.450.10coord: 31..101
score: 3.
NoneNo IPR availableunknownSSF54403Cystatin/monellincoord: 31..117
score: 1.57

The following gene(s) are paralogous to this gene:

None