MELO3C018594 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C018594
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionCysteine proteinase inhibitor, putative
Locationchr1 : 1363484 .. 1364091 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGATGAACAAAAATATTAAAGCCATACACACACACACACAAAAGTACTTACTGATTGCTAAACATGAGATAAAGGAATGTGAAAAGAAGAGTAATATGAGTATCACATGGACACCAATTCCCAACCTTGAAGAACCTCATGTGCAGGAGGTTGCAAAGTTTGGAGTTGAAGAGTACAATAAGATATACAAAAAGCATTGGAAATTAAAGCAAATTCAACAGGGTTGGTACTCATTGATCGACTATAATCAAACTCAATATCGTTTCCTTTTAGAACAAGATCAAGTTCCTCAAGGTGATGAGAAAATTTACGAAGCTATTGTGTCAGTACAGGCAACATATCAGCCTCCTTATCAAGTAATCAAGACTCTCTTACTTTTTATCCCATACTTCAACTATTCATCATCTAATTAAAAACTCTGCATCCACTTTATATGATGTATATGTAGTGAAGTTTGATTATATATTATGTTTATGTTATGTAGTACTTATGAATAAAAGCCATTCAAGTAATTGCTTTTTCTCTTTGTAAGCTTTTGTTTCAATAGTGTACGAGAAAAAGTTTAGAATAATTCGGTTCCTACGATTTATAATTAGAATTCGGGTTCG

mRNA sequence

AGATGAACAAAAATATTAAAGCCATACACACACACACACAAAAGTACTTACTGATTGCTAAACATGAGATAAAGGAATGTGAAAAGAAGAGTAATATGAGTATCACATGGACACCAATTCCCAACCTTGAAGAACCTCATGTGCAGGAGGTTGCAAAGTTTGGAGTTGAAGAGTACAATAAGATATACAAAAAGCATTGGAAATTAAAGCAAATTCAACAGGGTTGGTACTCATTGATCGACTATAATCAAACTCAATATCGTTTCCTTTTAGAACAAGATCAAGTTCCTCAAGGTGATGAGAAAATTTACGAAGCTATTGTGTCAGTACAGGCAACATATCAGCCTCCTTATCAAGTAATCAAGACTCTCTTACTTTTTATCCCATACTTCAACTATTCATCATCTAATTAAAAACTCTGCATCCACTTTATATGATGTATATGTAGTGAAGTTTGATTATATATTATGTTTATGTTATGTAGTACTTATGAATAAAAGCCATTCAAGTAATTGCTTTTTCTCTTTGTAAGCTTTTGTTTCAATAGTGTACGAGAAAAAGTTTAGAATAATTCGGTTCCTACGATTTATAATTAGAATTCGGGTTCG

Coding sequence (CDS)

ATGAACAAAAATATTAAAGCCATACACACACACACACAAAAGTACTTACTGATTGCTAAACATGAGATAAAGGAATGTGAAAAGAAGAGTAATATGAGTATCACATGGACACCAATTCCCAACCTTGAAGAACCTCATGTGCAGGAGGTTGCAAAGTTTGGAGTTGAAGAGTACAATAAGATATACAAAAAGCATTGGAAATTAAAGCAAATTCAACAGGGTTGGTACTCATTGATCGACTATAATCAAACTCAATATCGTTTCCTTTTAGAACAAGATCAAGTTCCTCAAGGTGATGAGAAAATTTACGAAGCTATTGTGTCAGTACAGGCAACATATCAGCCTCCTTATCAAGTAATCAAGACTCTCTTACTTTTTATCCCATACTTCAACTATTCATCATCTAATTAA

Protein sequence

MNKNIKAIHTHTQKYLLIAKHEIKECEKKSNMSITWTPIPNLEEPHVQEVAKFGVEEYNKIYKKHWKLKQIQQGWYSLIDYNQTQYRFLLEQDQVPQGDEKIYEAIVSVQATYQPPYQVIKTLLLFIPYFNYSSSN*
Homology
[Close]
BLAST of MELO3C018594 vs. TrEMBL
Match: A0A0A0K7B3_CUCSA (Phloem filament protein OS=Cucumis sativus GN=Csa_7G222870 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.5e-06
Identity = 31/93 (33.33%), Postives = 54/93 (58.06%), Query Frame = 1 

Query: 36  WTPIPNLEEPHVQEVAKFGVEEYNKIYKKHWKLKQIQQGWYSLIDYNQTQYRFLLEQDQV 95
           W  IP+ + P V ++ K+ V++YNK +K +   K++  GWY  IDY++T+ R ++E    
Sbjct: 10  WIQIPDTKTPCVIDLGKYAVDDYNKAHKDNLVFKKVIIGWYLEIDYDKTKLRLIIEVVN- 69

Query: 96  PQGDEKIYEAIVSVQATYQPPYQVIKTLLLFIP 129
            +G+  IYE ++ V        + +KT + FIP
Sbjct: 70  SKGEVIIYEVVIVVD---DKDGKKVKTPISFIP 98

[Close]
BLAST of MELO3C018594 vs. TrEMBL
Match: B9SYV2_RICCO (Cysteine proteinase inhibitor OS=Ricinus communis GN=RCOM_0041440 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.5e-06
Identity = 36/93 (38.71%), Postives = 51/93 (54.84%), Query Frame = 1 

Query: 36  WTPIPNLEEPHVQEVAKFGVEEYNKIYKKHWKLKQIQQGWYSLIDYNQTQYRFLLEQDQV 95
           W PI NL +PHV E+ KF V EYNK  K + +LK I +G   ++    T Y+ +L    V
Sbjct: 34  WGPINNLTDPHVVEIGKFAVREYNKRSKTNLELKSIVKGESQVV--AGTNYKLVL---AV 93

Query: 96  PQGDEKIYEAIVSVQATYQPPYQVIKTLLLFIP 129
             GD K YEA+V     ++ P++  + L  F P
Sbjct: 94  SGGDSKKYEAVV-----WEKPWEKFRELTSFKP 116

[Close]
BLAST of MELO3C018594 vs. NCBI nr
Match: gi|778730266|ref|XP_011659743.1| (PREDICTED: uncharacterized protein LOC101206992 [Cucumis sativus])

HSP 1 Score: 58.9 bits (141), Expect = 7.9e-06
Identity = 31/93 (33.33%), Postives = 54/93 (58.06%), Query Frame = 1 

Query: 36  WTPIPNLEEPHVQEVAKFGVEEYNKIYKKHWKLKQIQQGWYSLIDYNQTQYRFLLEQDQV 95
           W  IP+ + P V ++ K+ V++YNK +K +   K++  GWY  IDY++T+ R ++E    
Sbjct: 10  WIQIPDTKTPCVIDLGKYAVDDYNKAHKDNLVFKKVIIGWYLEIDYDKTKLRLIIEVVN- 69

Query: 96  PQGDEKIYEAIVSVQATYQPPYQVIKTLLLFIP 129
            +G+  IYE ++ V        + +KT + FIP
Sbjct: 70  SKGEVIIYEVVIVVD---DKDGKKVKTPISFIP 98

[Close]
BLAST of MELO3C018594 vs. NCBI nr
Match: gi|778730266|ref|XP_011659743.1| (PREDICTED: uncharacterized protein LOC101206992 [Cucumis sativus])

HSP 1 Score: 52.0 bits (123), Expect = 9.7e-04
Identity = 38/122 (31.15%), Postives = 61/122 (50.00%), Query Frame = 1 

Query: 9   HTHTQKYLLIAKHEIKE--CEKKSNMSITWTPIPNLEEPHVQEVAKFGVEEYNKIYKKHW 68
           H  T+ +  I+K    +  C+ K     TW  IP+   P V EVAK GV ++NK      
Sbjct: 209 HITTKTFSKISKKRDSKMSCDSKK----TWIKIPDCTTPCVNEVAKDGVNQHNKASGDSL 268

Query: 69  KLKQIQQGWYSLIDYNQTQYRFLLEQDQVPQGDEKIYEAIVSVQATYQPPYQVIKTLLLF 128
             K++  GW+  ID +  ++R ++E     +G   IYE I+ V    Q   + ++TL+ F
Sbjct: 269 VYKRVIVGWFWEIDDHAIKHRLIIEV-VTSKGVVLIYELIIVV---VQKDGKRVRTLISF 322


HSP 2 Score: 38.9 bits (89), Expect = 8.5e+00
Identity = 23/72 (31.94%), Postives = 36/72 (50.00%), Query Frame = 1 

Query: 36  WTPIPNLEEPHVQEVAKFGVEEYNKIYKKHWKLKQIQQGWYSLIDYNQTQYRFLLEQDQV 95
           W  I ++ +PHVQ++AKF VE++N+              WY L+     QY+  L+    
Sbjct: 110 WFRIIDINDPHVQQIAKFAVEKHNQDNNDSLVYISTIVCWYRLLSPILKQYKVYLKAKDC 169

Query: 96  PQGDEKIYEAIV 108
             G  + YEA+V
Sbjct: 170 -LGRVRDYEALV 180


HSP 3 Score: 37.7 bits (86), Expect = 1.9e+01
Identity = 17/48 (35.42%), Postives = 27/48 (56.25%), Query Frame = 1 

Query: 29  KSNMSITWTPIPNLEEPHVQEVAKFGVEEYNKIYKKHWKLKQIQQGWY 77
           + N  I W  IP++++  VQ+ AK+ V E+NKI   +       +GWY
Sbjct: 327 EKNPLIFWIKIPDVKKSCVQDCAKWAVTEHNKITHDYLAYDSTVEGWY 374


HSP 4 Score: 58.9 bits (141), Expect = 7.9e-06
Identity = 36/93 (38.71%), Postives = 51/93 (54.84%), Query Frame = 1 

Query: 36  WTPIPNLEEPHVQEVAKFGVEEYNKIYKKHWKLKQIQQGWYSLIDYNQTQYRFLLEQDQV 95
           W PI NL +PHV E+ KF V EYNK  K + +LK I +G   ++    T Y+ +L    V
Sbjct: 34  WGPINNLTDPHVVEIGKFAVREYNKRSKTNLELKSIVKGESQVV--AGTNYKLVL---AV 93

Query: 96  PQGDEKIYEAIVSVQATYQPPYQVIKTLLLFIP 129
             GD K YEA+V     ++ P++  + L  F P
Sbjct: 94  SGGDSKKYEAVV-----WEKPWEKFRELTSFKP 116

[Close]
BLAST of MELO3C018594 vs. NCBI nr
Match: gi|700188974|gb|KGN44207.1| (Phloem filament protein [Cucumis sativus])

HSP 1 Score: 58.9 bits (141), Expect = 7.9e-06
Identity = 31/93 (33.33%), Postives = 54/93 (58.06%), Query Frame = 1 

Query: 36  WTPIPNLEEPHVQEVAKFGVEEYNKIYKKHWKLKQIQQGWYSLIDYNQTQYRFLLEQDQV 95
           W  IP+ + P V ++ K+ V++YNK +K +   K++  GWY  IDY++T+ R ++E    
Sbjct: 10  WIQIPDTKTPCVIDLGKYAVDDYNKAHKDNLVFKKVIIGWYLEIDYDKTKLRLIIEVVN- 69

Query: 96  PQGDEKIYEAIVSVQATYQPPYQVIKTLLLFIP 129
            +G+  IYE ++ V        + +KT + FIP
Sbjct: 70  SKGEVIIYEVVIVVD---DKDGKKVKTPISFIP 98

The following BLAST results are available for this feature:
BLAST of MELO3C018594 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7B3_CUCSA5.5e-0633.33Phloem filament protein OS=Cucumis sativus GN=Csa_7G222870 PE=4 SV=1[more]
B9SYV2_RICCO5.5e-0638.71Cysteine proteinase inhibitor OS=Ricinus communis GN=RCOM_0041440 PE=3 SV=1[more]
BLAST of MELO3C018594 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778730266|ref|XP_011659743.1|7.9e-0633.33PREDICTED: uncharacterized protein LOC101206992 [Cucumis sativus][more]
gi|778730266|ref|XP_011659743.1|9.7e-0431.15PREDICTED: uncharacterized protein LOC101206992 [Cucumis sativus][more]
gi|700188974|gb|KGN44207.1|7.9e-0633.33Phloem filament protein [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR020381Proteinase inhibitor I25, cystatin, conserved region
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0004869 cysteine-type endopeptidase inhibitor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018594T1MELO3C018594T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020381Proteinase inhibitor I25, cystatin, conserved regionPFAMPF16845SQAPIcoord: 39..108
score: 3.
NoneNo IPR availableGENE3DG3DSA:3.10.450.10coord: 36..111
score: 4.
NoneNo IPR availableunknownSSF54403Cystatin/monellincoord: 36..113
score: 2.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C018594Cla012896Watermelon (97103) v1mewmB191
MELO3C018594ClCG09G015870Watermelon (Charleston Gray)mewcgB168
MELO3C018594Cla97C09G177710Watermelon (97103) v2mewmbB218
MELO3C018594Bhi05G000749Wax gourdmewgoB219
MELO3C018594CSPI07G06030Wild cucumber (PI 183967)cpimeB538
MELO3C018594CmaCh19G004720Cucurbita maxima (Rimu)cmameB457
MELO3C018594CmoCh19G004880Cucurbita moschata (Rifu)cmomeB449
MELO3C018594Lsi03G007230Bottle gourd (USVL1VR-Ls)lsimeB250
MELO3C018594CsGy7G005690Cucumber (Gy14) v2cgybmeB468
MELO3C018594CsaV3_7G006990Cucumber (Chinese Long) v3cucmeB548
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C018594Cucumber (Chinese Long) v2cumeB530
MELO3C018594Watermelon (Charleston Gray)mewcgB176
MELO3C018594Watermelon (97103) v1mewmB207
MELO3C018594Cucurbita pepo (Zucchini)cpemeB220
MELO3C018594Cucurbita pepo (Zucchini)cpemeB604
MELO3C018594Cucurbita pepo (Zucchini)cpemeB613
MELO3C018594Bottle gourd (USVL1VR-Ls)lsimeB247
MELO3C018594Silver-seed gourdcarmeB0289
MELO3C018594Silver-seed gourdcarmeB0290
MELO3C018594Silver-seed gourdcarmeB0726
MELO3C018594Watermelon (97103) v2mewmbB224
MELO3C018594Wax gourdmewgoB220
MELO3C018594Melon (DHL92) v3.5.1memeB094
MELO3C018594Cucumber (Gy14) v1cgymeB379
MELO3C018594Cucurbita maxima (Rimu)cmameB096
MELO3C018594Cucurbita maxima (Rimu)cmameB098
MELO3C018594Cucurbita maxima (Rimu)cmameB463
MELO3C018594Cucurbita moschata (Rifu)cmomeB085
MELO3C018594Cucurbita moschata (Rifu)cmomeB094
MELO3C018594Cucurbita moschata (Rifu)cmomeB454