CmoCh19G004880 (gene) Cucurbita moschata (Rifu)

NameCmoCh19G004880
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr19 : 5820543 .. 5820914 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTCAGGAGCGGTTGCTCATGCTGGTCAATCGAACGACATCAATCATGATATGATTGATGCAAAAAAGGGTTTTGTTTGGATCACATGGACATCGATTCACAACGTTGAAGAAGCCAACGTGCAAGAAATTGCGAAGTTTGCAGTGGAAGAGTATAATAAGAAGTACAAAAAACAATGGAAATGCAAACGCATTCAACAAGGTTGGTACTCGGTGATGAAAGATGAGACTCAATATCGTTTCCTTTTGGAGCAAGACGATGTGCGTCCAGGAGATCAGCAAGTATATCAAGCTATCGTGTCGTTAAAAGTAAATGGTATTAAACTGACCAAGAATCTTATACTTTTCATGCCATACTTCAAATACTAA

mRNA sequence

ATGAGTTCAGGAGCGGTTGCTCATGCTGGTCAATCGAACGACATCAATCATGATATGATTGATGCAAAAAAGGGTTTTGTTTGGATCACATGGACATCGATTCACAACGTTGAAGAAGCCAACGTGCAAGAAATTGCGAAGTTTGCAGTGGAAGAGTATAATAAGAAGTACAAAAAACAATGGAAATGCAAACGCATTCAACAAGGTTGGTACTCGGTGATGAAAGATGAGACTCAATATCGTTTCCTTTTGGAGCAAGACGATGTGCGTCCAGGAGATCAGCAAGTATATCAAGCTATCGTGTCGTTAAAAGTAAATGGTATTAAACTGACCAAGAATCTTATACTTTTCATGCCATACTTCAAATACTAA

Coding sequence (CDS)

ATGAGTTCAGGAGCGGTTGCTCATGCTGGTCAATCGAACGACATCAATCATGATATGATTGATGCAAAAAAGGGTTTTGTTTGGATCACATGGACATCGATTCACAACGTTGAAGAAGCCAACGTGCAAGAAATTGCGAAGTTTGCAGTGGAAGAGTATAATAAGAAGTACAAAAAACAATGGAAATGCAAACGCATTCAACAAGGTTGGTACTCGGTGATGAAAGATGAGACTCAATATCGTTTCCTTTTGGAGCAAGACGATGTGCGTCCAGGAGATCAGCAAGTATATCAAGCTATCGTGTCGTTAAAAGTAAATGGTATTAAACTGACCAAGAATCTTATACTTTTCATGCCATACTTCAAATACTAA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR020381Proteinase inhibitor I25, cystatin, conserved region
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh19G004880.1CmoCh19G004880.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020381Proteinase inhibitor I25, cystatin, conserved regionPFAMPF16845SQAPIcoord: 34..104
score: 2.1
NoneNo IPR availableGENE3DG3DSA:3.10.450.10coord: 31..102
score: 7.
NoneNo IPR availableunknownSSF54403Cystatin/monellincoord: 31..118
score: 9.9

The following gene(s) are paralogous to this gene:

None