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The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGAGTTGTGGAGTTATTGGCAATGTGAACCATGAGACAAAGGATGGAAAGAAGGGTAATGTGTGGATCACATGGACACCAATTCCCAACGTTGAAGATCTGCTTGTGAAAATCATTGCAGAGTTCGCAGTGGCAGAATACAATAAGAAATACAAAAAGCAATGGAAATGTAAGCGCATTCAACAAGCTTGGTACTCAGTGATAATAGAGGAGAATCAAACTCAATATCGTTTCCATTTAGAGCAAGATGAAGTTCCTGAAGGAGATGAGAAAATATAAGAGGCTGTTGTGTCAGGAGTCCAATCACATGATTTGCCTTTTCTACTAATTAAAATGGATCTTATACTTGTCATGCCATATTTCAATTATTGATCTAACTTTCTAGCTCTTGTATTCTACAATAATAATAATACTCTCTACATCACTTATGGTGTAGTGAGTTTGAGATTATCTATATCTAAATTATAGAATTATAAATAAAAGCTATACTTTGAATACTAATGTTCATGTTAATGACGTATGTTGGGAGGGGTAAGTTCGTCGAGAAAAATGTCTGAATTTCTTGTAGTGTCATAGTATGTACTTGTCTACGTTTTTTTTAATAATATTCTATTTTTGTAGTTGTTTAAAAGGATTACTATTACTTTAGGCCCCGTTTGGTAACCATTTGGTTTTTAGTTCTTAAAAATTAAGCATACAAACAGCCCTCTCACCCTTAAATGTCTTGCTTTCTTATCTACTTTTTATCTATGTTTTCAAAAATCAAGCCAAATTTTAAAAACTAAAAAAAATAGATTTTAAAAACTTTTTTATTTTTCAAATTTGGTTAAGAATTCAACTCTTGTACTTAGGGGTGTGCATGGTTTGGTTCAGTTCGGTTTGGGCAAAACTAAGAACTAAATCGAATTTATCTAAAATCGGCTAGGCTCGATTTTAGTTTCTAAACTGGACCGATTTGATTCGGTTCAGGTCGGTTCGGTTCGATTAAAATCGAATTTAGGTCATTTTTTCAAACAAAAAAGAAGAACACTTATGTAGATTTTTTGAAAAAGGAAAAAAATAATTCTAAAAAAAAAAACCTTCGGTGGTGGATTGTGCTTAGTCGGTCTAGTTTGGTGAGGTGAAGGAGGTGAAATTTGAACTGGAGCAGATCTGGTCTGTGTGGTGTCGAACTCGTGTAGCTGGAGAAGGTGAAAATGAAGGTGAAGGTGGAGCCGGTCGGAGGAGGTGGTGTGGAACTCGTGGAGCCGGTCGCCAATAATCTTCACGACTCAAGGTTGAAGGTGAAACTAGCGACCGACGTGCGTGCTGAGGGTTGA mRNA sequence ATGAGTTGTGGAGTTATTGGCAATGTGAACCATGAGACAAAGGATGGAAAGAAGGGTAATGTGTGGATCACATGGACACCAATTCCCAACGTTGAAGATCTGCTTGTGAAAATCATTGCAGAGTTCGCAGTGGCAGAATACAATAAGAAATACAAAAAGCAATGGAAATGTAAGCGCATTCAACAAGCTTGGTACTCAGTGATAATAGAGGAGAATCAAACTCAATATCGTTTCCATTTAGAGCAAGATGAACTGGAGAAGGTGAAAATGAAGGTGAAGGTGGAGCCGGTCGGAGGAGGTGGTGTGGAACTCGTGGAGCCGGTCGCCAATAATCTTCACGACTCAAGGTTGAAGGTGAAACTAGCGACCGACGTGCGTGCTGAGGGTTGA Coding sequence (CDS) ATGAGTTGTGGAGTTATTGGCAATGTGAACCATGAGACAAAGGATGGAAAGAAGGGTAATGTGTGGATCACATGGACACCAATTCCCAACGTTGAAGATCTGCTTGTGAAAATCATTGCAGAGTTCGCAGTGGCAGAATACAATAAGAAATACAAAAAGCAATGGAAATGTAAGCGCATTCAACAAGCTTGGTACTCAGTGATAATAGAGGAGAATCAAACTCAATATCGTTTCCATTTAGAGCAAGATGAACTGGAGAAGGTGAAAATGAAGGTGAAGGTGGAGCCGGTCGGAGGAGGTGGTGTGGAACTCGTGGAGCCGGTCGCCAATAATCTTCACGACTCAAGGTTGAAGGTGAAACTAGCGACCGACGTGCGTGCTGAGGGTTGA Protein sequence MSCGVIGNVNHETKDGKKGNVWITWTPIPNVEDLLVKIIAEFAVAEYNKKYKKQWKCKRIQQAWYSVIIEENQTQYRFHLEQDELEKVKMKVKVEPVGGGGVELVEPVANNLHDSRLKVKLATDVRAEG
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
| Term | Definition |
|---|
GO Assignments
This mRNA is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0008150 |
biological_process |
| cellular_component |
GO:0005575 |
cellular_component |
| molecular_function |
GO:0003674 |
molecular_function |
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Lsi03G007230.1.CDS.2 | Lsi03G007230.1.CDS.2 | CDS |
| Lsi03G007230.1.CDS.1 | Lsi03G007230.1.CDS.1 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Lsi03G007230.1 | Lsi03G007230.1-protein | polypeptide |
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | GENE3D | G3DSA:3.10.450.10 | | coord: 25..92
score: 2. |
| None | No IPR available | unknown | SSF54403 | Cystatin/monellin | coord: 25..84
score: 1.9 |
|
