Lsi02G011250 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi02G011250
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionThymidine kinase
Locationchr02 : 13150789 .. 13154523 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATCCATAAAAAAAAAAAAAAAACGGAGTCCCCATTCACTCTCCAAAGTGCAAACCAAGAACCCTCGATGTTCTACAAATTGCAGACATTTCTCATCTGCAAAGCCAAAACCCCATTAAAACCCTCAACCAAAATCTCATGTTAACCATTTCAAAGATGAAATCCTTGGTATCTTCGTCTTCTTTCTCAACCCTCTCGCCCTATTTCCCCATTACCGCTTCTCCAACCTTCTTTTCTTTGCCTTCTAAATCTACGCAATGCAGCCCTATATTCACCCAAGTCTCCAATTACTTCACTTTCAAAACACCCAGAATTTTGTTTCCCTCAAAAGGGATTTCTTCAGCCCAGAATCGAACAGGGCAAATCGCAGCCACTTTGTCACCGCCCTCCGGCGAGATTCATGTGATTGTGGGCCCGATGTTTGCTGGGAAGACAACCACTCTTCTTCGGCGGATTCAGTCCGAGAGCAGCAATGGCAGGTCTTTTATGCTCTGCTTTTATGCTTCCGTTTATTAATCGAATGGGTTGCGAGCGATTAGTGTAGTGTTTTTTTCTAGCCTTATTTCAACTTGTTTCCCTTATATTTTTTAACTTTTTGCAACTAATGGAAACTGGGTTTTATACTTATGACAATAGATAGTGGATTTGCTGTTAGATTGGGAGAATTTTGTTTATCTTTTAATGTATTCTCAGCAATCTCTCTGCATTGGCTTGAATATTGGCATGATGGTATCAATATGAAATGGGAAGAAAATGGCATTGAATTTACAACCTCTTGTGCTATATTTACTTAAATCGAGACTAATATTGAGTGTTTGGGTGGATAAGTTATGGTAAATTTGGTGTTTTATTCTCTATCCCTACAAATTCTCAATAATGGAGTTATGTATATTGGTAATGGATGAGGCTGAAGCTGATATATGTTGTGGGTTATGGCCTCTTGATAGAGAATGAATTAAACGAGTGAATTGGTGAACTAAATTTAGCGATTCTTTGAAGAAAAGCTTTAGAAAAAGAACAAAAAGAAAAAGAAAAAAAATTTGAATCCCAAACTTTCCCTTGCTCCCTTAGCTCTTTTAAAAGATTCTTTCATTTTTTTAGCTCAACACTAGAAGATAGCCTTATTAACATAAGACCTCATGGCTTGGGTTTTTCTTTCAAAGAAGACTGCTAATATGGAAACATTGTTGCTCCAAGTTAGGAAGAGGAAATTTCACACCAAAGGTCTGGGGACAGTTTTCACTCAATCTATAAAATATGGGGACATTTAAGAAGTCAGTAACTTGCATTTACACCATGCTTTCTGCAGAGCATGCACCAAATCAATCTACTATTTGGAGTTAGATCACATGGTTTCAAAATGATACAACTACAAGAGTTCCAATGAGATTTGTGAAATAAAGGCTTAGGAGAACATGTTCAAGTCATAGTGGCCCCCTATCCAAAATTTAATATCATACGAGTTTCTCTGACAATTAAATGTAGTAGAACCAGCAGATTGCTGTCTTGTGAGAATTGTTGAAAGCGCTCAAGTTAGCTGGGATGCTCTGAAAAGAAAAAAGTTGTAGAGTTTTTGATAGATTTAATATTTCTATGCTTTTCTTAGTCTATGCTCAGGTTCTGGATATTGGATTAAGTGCACCATTTCAATTTTTGTGGAATCGGATTATCATATTCAAGACCCTCGATTTCAGCTTTTAATTAATTAGATTTTTTTATTTTTTATTTTTTATTTCCTTATTATTGTGTGTGTGTGTGGGGGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGGGACATCTTGTCTTCCTTTTGTGTCTTTATATTAAAAAAGATTGCCCTACCTTCGTACATTTGAGGTCAAGACAGCATCTTTCCTGCTGAAGGCTTATGATCTATATGCTTGTTGTTGATTGGATATAGTATAAATTTTTGGAAATTTTAGAACCTAATTACTTGGATCAGTTGGATGGAATGTATATTCTGATGTATCTTGATTGATTTAGAAGCTTCTTTTTTCAATACAATTCATAAGAATTATTCTTTCTTCTTTTCATGTATGTTTTTTTAACAGAAGTGTAGCTATAATTAAGTCAAATAAAGACACGAGATATGGATTGGATTCTATTGTGACACATGACGGCATGAAACTGCCTTGCTGGGCATTACCAAACTTAACATCTTTCAAACAGAAATTTGGTCAAGGTGCTTATGACAAGGTATCATAATCCCCCTCTCTTTGTGATATGCCAATGTACTTAAATTCTTCATATCTTGCTTAGACATTTCATTAATTAAATACAAAGTATTCTCATCCTTGTTAAAGGGAGCAAAGTATTTAAATCTATGAGGCTAAAGATTTGGTTTCTAATTAGAATTAGCAGACTGCAGAGGAGACTGATTGAGTAGCCTTCTGAATTTCGGTCACCTTCATAATTGGAATTCCTGATTTTCCTGGTAACAAAATTGTTAATTTAATTATGATATTGGTATGACAGCTAGATGTGATTGGAATTGATGAAGCTCAATTCTTCGACGATCTTTATGATTTCTGTCGTGAAGCTGCTGATATTGATGGCAAAACAGTTATAGTTGCTGGGCTGGATGGGGATTACTTGAGGTATAATCAAATTTACTGGCCTAGTTTTGGTTCATTCGCTAAAATAATTTCAATGAAACTGATGGCCTTTGGCTTTCATATGGTAAAACATTCAATAGAACTTCAGATTGGTTTAAATTGAATACTCATTAGTAACTCAGTTAAAGCTTTTGTGTTGGGGTTTATACAAAAAACTGAACAGGAGGAACTTCGGTTCAGTTCTCAATATAATTCCACTTGCTGATTCCGTAACAAAGTTAACTGCTCGATGTGAGATCTGCGGCAATCGGGCTTTCTTTACATTAAGGAAGACAGAAGAAAAAGAGACCGAGCTGATCGGTGGTGCTGACGTGTATATGCCCGTATGTCGACAACATTACGTCAGTGGGCAAGTAGTGATAGAGACAGCAAGAACTGTAGTAGAATCACACAAGCTTGAGTGTAGGACTCCAGCATAGTTGTTCTTAGTAGGTAGTATCAGGTTTGCAGCATCACATACATCCCCAGTAGCGAACGTCGCAACGTATTAGTTGTCCCGACGGGCGATTTTGGAACTATGATGAGCATAGTTGTAGTATTAGGGATATTTACTCAGAGATTTGAAGGCAAAAATATAGAAGGAAGGTGAAAAGGGGGTTTTGTTGTTGGTTTAGAAAATGGAATTGAGTTGGTTGTGCTTGTATTTTCATGGCTGCTTTGATTGATTGGATTAGATTAGAAGGAAAAATGAGTCAATGTTGTGTCATATGTAAGTATTTGTGTTGAATGAAAGAGGAGATGTAACCAACAAAGTTGAAAATTAATACATTATTGAGGGAGGAGACATTCAAGTGGCAACCATGTGTTTGCTTCGGCAGTTGTTGATCAGCCAGCTGTTGATTTTATTGATTGTAATTTCCATTGCCATATAACAACTACTTTTCATAATTAAAGACATGAAAAGTTGTTAATAATTGAATTAGAGCAAATATTATCCTTTTGAAATTATT

mRNA sequence

CATCCATAAAAAAAAAAAAAAAACGGAGTCCCCATTCACTCTCCAAAGTGCAAACCAAGAACCCTCGATGTTCTACAAATTGCAGACATTTCTCATCTGCAAAGCCAAAACCCCATTAAAACCCTCAACCAAAATCTCATGTTAACCATTTCAAAGATGAAATCCTTGGTATCTTCGTCTTCTTTCTCAACCCTCTCGCCCTATTTCCCCATTACCGCTTCTCCAACCTTCTTTTCTTTGCCTTCTAAATCTACGCAATGCAGCCCTATATTCACCCAAGTCTCCAATTACTTCACTTTCAAAACACCCAGAATTTTGTTTCCCTCAAAAGGGATTTCTTCAGCCCAGAATCGAACAGGGCAAATCGCAGCCACTTTGTCACCGCCCTCCGGCGAGATTCATGTGATTGTGGGCCCGATGTTTGCTGGGAAGACAACCACTCTTCTTCGGCGGATTCAGTCCGAGAGCAGCAATGGCAGAAGTGTAGCTATAATTAAGTCAAATAAAGACACGAGATATGGATTGGATTCTATTGTGACACATGACGGCATGAAACTGCCTTGCTGGGCATTACCAAACTTAACATCTTTCAAACAGAAATTTGGTCAAGGTGCTTATGACAAGCTAGATGTGATTGGAATTGATGAAGCTCAATTCTTCGACGATCTTTATGATTTCTGTCGTGAAGCTGCTGATATTGATGGCAAAACAGTTATAGTTGCTGGGCTGGATGGGGATTACTTGAGGAGGAACTTCGGTTCAGTTCTCAATATAATTCCACTTGCTGATTCCGTAACAAAGTTAACTGCTCGATGTGAGATCTGCGGCAATCGGGCTTTCTTTACATTAAGGAAGACAGAAGAAAAAGAGACCGAGCTGATCGGTGGTGCTGACGTGTATATGCCCGTATGTCGACAACATTACGTCAGTGGGCAAGTAGTGATAGAGACAGCAAGAACTGTAGTAGAATCACACAAGCTTGAGTGTAGGACTCCAGCATAGTTGTTCTTAGTAGGTAGTATCAGGTTTGCAGCATCACATACATCCCCAGTAGCGAACGTCGCAACGTATTAGTTGTCCCGACGGGCGATTTTGGAACTATGATGAGCATAGTTGTAGTATTAGGGATATTTACTCAGAGATTTGAAGGCAAAAATATAGAAGGAAGGTGAAAAGGGGGTTTTGTTGTTGGTTTAGAAAATGGAATTGAGTTGGTTGTGCTTGTATTTTCATGGCTGCTTTGATTGATTGGATTAGATTAGAAGGAAAAATGAGTCAATGTTGTGTCATATGTAAGTATTTGTGTTGAATGAAAGAGGAGATGTAACCAACAAAGTTGAAAATTAATACATTATTGAGGGAGGAGACATTCAAGTGGCAACCATGTGTTTGCTTCGGCAGTTGTTGATCAGCCAGCTGTTGATTTTATTGATTGTAATTTCCATTGCCATATAACAACTACTTTTCATAATTAAAGACATGAAAAGTTGTTAATAATTGAATTAGAGCAAATATTATCCTTTTGAAATTATT

Coding sequence (CDS)

ATGTTAACCATTTCAAAGATGAAATCCTTGGTATCTTCGTCTTCTTTCTCAACCCTCTCGCCCTATTTCCCCATTACCGCTTCTCCAACCTTCTTTTCTTTGCCTTCTAAATCTACGCAATGCAGCCCTATATTCACCCAAGTCTCCAATTACTTCACTTTCAAAACACCCAGAATTTTGTTTCCCTCAAAAGGGATTTCTTCAGCCCAGAATCGAACAGGGCAAATCGCAGCCACTTTGTCACCGCCCTCCGGCGAGATTCATGTGATTGTGGGCCCGATGTTTGCTGGGAAGACAACCACTCTTCTTCGGCGGATTCAGTCCGAGAGCAGCAATGGCAGAAGTGTAGCTATAATTAAGTCAAATAAAGACACGAGATATGGATTGGATTCTATTGTGACACATGACGGCATGAAACTGCCTTGCTGGGCATTACCAAACTTAACATCTTTCAAACAGAAATTTGGTCAAGGTGCTTATGACAAGCTAGATGTGATTGGAATTGATGAAGCTCAATTCTTCGACGATCTTTATGATTTCTGTCGTGAAGCTGCTGATATTGATGGCAAAACAGTTATAGTTGCTGGGCTGGATGGGGATTACTTGAGGAGGAACTTCGGTTCAGTTCTCAATATAATTCCACTTGCTGATTCCGTAACAAAGTTAACTGCTCGATGTGAGATCTGCGGCAATCGGGCTTTCTTTACATTAAGGAAGACAGAAGAAAAAGAGACCGAGCTGATCGGTGGTGCTGACGTGTATATGCCCGTATGTCGACAACATTACGTCAGTGGGCAAGTAGTGATAGAGACAGCAAGAACTGTAGTAGAATCACACAAGCTTGAGTGTAGGACTCCAGCATAG

Protein sequence

MLTISKMKSLVSSSSFSTLSPYFPITASPTFFSLPSKSTQCSPIFTQVSNYFTFKTPRILFPSKGISSAQNRTGQIAATLSPPSGEIHVIVGPMFAGKTTTLLRRIQSESSNGRSVAIIKSNKDTRYGLDSIVTHDGMKLPCWALPNLTSFKQKFGQGAYDKLDVIGIDEAQFFDDLYDFCREAADIDGKTVIVAGLDGDYLRRNFGSVLNIIPLADSVTKLTARCEICGNRAFFTLRKTEEKETELIGGADVYMPVCRQHYVSGQVVIETARTVVESHKLECRTPA
Homology
[Close]
BLAST of Lsi02G011250 vs. Swiss-Prot
Match: KITH_ORYSJ (Thymidine kinase OS=Oryza sativa subsp. japonica GN=TK PE=2 SV=2)

HSP 1 Score: 317.4 bits (812), Expect = 1.6e-85
Identity = 158/227 (69.60%), Postives = 185/227 (81.50%), Query Frame = 1 

Query: 62  PSKGISSA-----QNRTGQIAATLSPPS--GEIHVIVGPMFAGKTTTLLRRIQSESSNG- 121
           P + +S+A     ++R G  +A  + PS  GEIHVIVGPMFAGKTT LLRR+Q E+  G 
Sbjct: 37  PVRPVSAAAAAADKSRGGGGSAMEAQPSYPGEIHVIVGPMFAGKTTALLRRVQVEAGTGS 96

Query: 122 RSVAIIKSNKDTRYGLDSIVTHDGMKLPCWALPNLTSFKQKFGQGAYDKLDVIGIDEAQF 181
           R+VA+IKS+KD RYGLDS+VTHDG K+PCWALP L+SF+ K G  AYDK+DVIGIDEAQF
Sbjct: 97  RNVALIKSDKDNRYGLDSVVTHDGTKMPCWALPELSSFQDKLGTEAYDKVDVIGIDEAQF 156

Query: 182 FDDLYDFCREAADIDGKTVIVAGLDGDYLRRNFGSVLNIIPLADSVTKLTARCEICGNRA 241
           FDDL+DFC +AAD DGK V+VAGLDGDY R  FGSVL+IIPLADSVTKLTARCE+CG RA
Sbjct: 157 FDDLHDFCCKAADRDGKIVVVAGLDGDYKRNKFGSVLDIIPLADSVTKLTARCELCGRRA 216

Query: 242 FFTLRKTEEKETELIGGADVYMPVCRQHYVSGQVVIETARTVVESHK 281
           FFTLRKT E +TELIGGADVYMPVCRQHY+ GQ+VIE  R V++  K
Sbjct: 217 FFTLRKTRETKTELIGGADVYMPVCRQHYLDGQIVIEATRIVLDLEK 263

[Close]
BLAST of Lsi02G011250 vs. Swiss-Prot
Match: KITHB_ARATH (Thymidine kinase b OS=Arabidopsis thaliana GN=TK1B PE=1 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 5.7e-83
Identity = 163/274 (59.49%), Postives = 208/274 (75.91%), Query Frame = 1 

Query: 7   MKSLVSSSSFSTLSPYFPITASPTFFSLPSK-STQCSPIFTQVSNYFTFKTPRILFPSKG 66
           M++L+S S    L+P+      P+ FS   + S   + I    S   T  T ++   +  
Sbjct: 6   MRTLISPS----LAPFSLHLHKPSLFSTALRFSFSINNITPTNSPPSTISTRKLQTKATR 65

Query: 67  ISSAQNRTGQIAATLSPPSGEIHVIVGPMFAGKTTTLLRRIQSESSNGRSVAIIKSNKDT 126
           ++S+ +   Q  ++ SP  GEIHV+VGPMF+GKTTTLLRRI +E   G+ +AIIKSNKDT
Sbjct: 66  VTSSSS--SQPLSSSSP--GEIHVVVGPMFSGKTTTLLRRILAERETGKRIAIIKSNKDT 125

Query: 127 RYGLDSIVTHDGMKLPCWALPNLTSFKQKFGQGAYD-KLDVIGIDEAQFFDDLYDFCREA 186
           RY  +SIVTHDG K PCW+LP+L+SFK++FG   Y+ +LDVIGIDEAQFF DLY+FCREA
Sbjct: 126 RYCTESIVTHDGEKYPCWSLPDLSSFKERFGFDDYENRLDVIGIDEAQFFGDLYEFCREA 185

Query: 187 ADIDGKTVIVAGLDGDYLRRNFGSVLNIIPLADSVTKLTARCEICGNRAFFTLRKTEEKE 246
           AD +GKTVIVAGLDGD++RR FGSVL++IP+AD+VTKLT+RCE+CG RA FT+RKTEEKE
Sbjct: 186 ADKEGKTVIVAGLDGDFMRRRFGSVLDLIPIADTVTKLTSRCEVCGKRALFTMRKTEEKE 245

Query: 247 TELIGGADVYMPVCRQHYVSGQVVIETARTVVES 279
           TELIGGA+VYMPVCR HYV GQ V+ETAR V++S
Sbjct: 246 TELIGGAEVYMPVCRSHYVCGQNVLETARAVLDS 271

[Close]
BLAST of Lsi02G011250 vs. Swiss-Prot
Match: KITHA_ARATH (Thymidine kinase a OS=Arabidopsis thaliana GN=TK1A PE=1 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 2.7e-80
Identity = 138/194 (71.13%), Postives = 171/194 (88.14%), Query Frame = 1 

Query: 84  SGEIHVIVGPMFAGKTTTLLRRIQSESSNGRSVAIIKSNKDTRYGLDSIVTHDGMKLPCW 143
           SG +HVI+GPMF+GK+T+LLRRI+SE S+GRSVA++KS+KDTRY  DS+VTHDG+  PCW
Sbjct: 30  SGAVHVIMGPMFSGKSTSLLRRIKSEISDGRSVAMLKSSKDTRYAKDSVVTHDGIGFPCW 89

Query: 144 ALPNLTSFKQKFGQGAYDKLDVIGIDEAQFFDDLYDFCREAADIDGKTVIVAGLDGDYLR 203
           ALP+L SF +KFG  AY+KLDVIGIDEAQFF DLY+FC + AD DGK VIVAGLDGDYLR
Sbjct: 90  ALPDLMSFPEKFGLDAYNKLDVIGIDEAQFFGDLYEFCCKVADDDGKIVIVAGLDGDYLR 149

Query: 204 RNFGSVLNIIPLADSVTKLTARCEICGNRAFFTLRKTEEKETELIGGADVYMPVCRQHYV 263
           R+FG+VL+IIP+ADSVTKLTARCE+CG++AFFTLRK  +  TELIGGADVYMPVCR+HY+
Sbjct: 150 RSFGAVLDIIPIADSVTKLTARCEVCGHKAFFTLRKNCDTRTELIGGADVYMPVCRKHYI 209

Query: 264 SGQVVIETARTVVE 278
           +  +VI+ ++ V+E
Sbjct: 210 TNHIVIKASKKVLE 223

[Close]
BLAST of Lsi02G011250 vs. Swiss-Prot
Match: KITH_SWPVK (Thymidine kinase OS=Swinepox virus (strain Kasza) GN=TK PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.9e-38
Identity = 81/180 (45.00%), Postives = 115/180 (63.89%), Query Frame = 1 

Query: 85  GEIHVIVGPMFAGKTTTLLRRIQSESSNGRSVAIIKSNKDTRYGLDSIVTHDGMKLPCWA 144
           G IH+I+GPMF+GK+T L+R +        +  +IK +KD RYG D++ THD   +   +
Sbjct: 4   GFIHLILGPMFSGKSTELIRLVNRYQIATYNCRVIKYSKDNRYGNDAVYTHDKCYISAVS 63

Query: 145 LPNLTSFKQKFGQGAYDKLDVIGIDEAQFFDDLYDFCREAADIDGKTVIVAGLDGDYLRR 204
             +L   K        D +D++GIDE QFF+D+ +FC   A+  GK VIVA LDG Y R+
Sbjct: 64  TDSLFDIKDTL-----DDVDIVGIDEGQFFNDIVEFCEYIAN-KGKIVIVAALDGTYERK 123

Query: 205 NFGSVLNIIPLADSVTKLTARCEICGNRAFFTLRKTEEKETELIGGADVYMPVCRQHYVS 264
            FG++LN+IPL++ VTKL A C IC   A F+ R ++EKE ELIGG + Y+ VCR  Y++
Sbjct: 124 PFGNILNLIPLSEKVTKLNAICMICHRDASFSKRLSDEKEIELIGGKEKYLSVCRSCYLT 177

[Close]
BLAST of Lsi02G011250 vs. Swiss-Prot
Match: KITH_CHICK (Thymidine kinase, cytosolic OS=Gallus gallus GN=TK1 PE=1 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 3.4e-35
Identity = 83/183 (45.36%), Postives = 111/183 (60.66%), Query Frame = 1 

Query: 83  PSGEIHVIVGPMFAGKTTTLLRRIQSESSNGRSVAIIKSNKDTRYGLDSIVTHDGMKL-- 142
           P G+I VI GPMF+GK+T L+RR++          ++K  KDTRY    + THD   +  
Sbjct: 17  PRGQIQVIFGPMFSGKSTELMRRVRRFQLAQYRCLLVKYAKDTRYCTTGVSTHDRNTMEA 76

Query: 143 -PCWALPNLTSFKQKFGQGAYDKLDVIGIDEAQFFDDLYDFCREAADIDGKTVIVAGLDG 202
            P  AL ++  +++  G        VIGIDE QFF D+ +FC + A+  GKTVIVA LDG
Sbjct: 77  RPACALQDV--YQEALGSA------VIGIDEGQFFPDIVEFCEKMANT-GKTVIVAALDG 136

Query: 203 DYLRRNFGSVLNIIPLADSVTKLTARCEICGNRAFFTLRKTEEKETELIGGADVYMPVCR 262
            + R+ FGS+LN++PLA+SV KL A C  C   A +T R   E+E E+IGGAD Y  VCR
Sbjct: 137 TFQRKAFGSILNLVPLAESVVKLNAVCMECYREASYTKRLGAEREVEVIGGADKYHSVCR 190

[Close]
BLAST of Lsi02G011250 vs. TrEMBL
Match: A0A0A0LYL4_CUCSA (Thymidine kinase OS=Cucumis sativus GN=Csa_1G181480 PE=3 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 1.5e-138
Identity = 248/285 (87.02%), Postives = 264/285 (92.63%), Query Frame = 1 

Query: 3   TISKMKSLVSSSSFSTLSPYFPITASPTFFSLPSKSTQCSPIFTQVSNYFTFKTPRILFP 62
           TIS MKS V SSSFS LSPYFPI+ASP+FFSLPSKS QC P+FTQ+SN+FTFKTP I  P
Sbjct: 69  TISNMKSFVFSSSFSILSPYFPISASPSFFSLPSKSAQCGPMFTQLSNFFTFKTPTISLP 128

Query: 63  SKGISSAQNRTGQIAATLSPPSGEIHVIVGPMFAGKTTTLLRRIQSESSNGRSVAIIKSN 122
           SKG  S QNR  Q+ A+LSPPSGEIHVI+GPMFAGKTTTLLRRIQSES NGRSVAIIKSN
Sbjct: 129 SKGFFSTQNRNPQMRASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGRSVAIIKSN 188

Query: 123 KDTRYGLDSIVTHDGMKLPCWALPNLTSFKQKFGQGAYDKLDVIGIDEAQFFDDLYDFCR 182
           KDTRYGLDSIVTHDGMKLPCWA+PNL+SFK+KFGQG+YDKLDVIGIDEAQFFDDLYDFC 
Sbjct: 189 KDTRYGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCC 248

Query: 183 EAADIDGKTVIVAGLDGDYLRRNFGSVLNIIPLADSVTKLTARCEICGNRAFFTLRKTEE 242
           EAADIDGKTVIVAGLDGDYLRRNFGSVL+IIPLADSVTKLTARCEICGNRAFFTLRKT+E
Sbjct: 249 EAADIDGKTVIVAGLDGDYLRRNFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTQE 308

Query: 243 KETELIGGADVYMPVCRQHYVSGQVVIETARTVVESHKLECRTPA 288
           KETELIGGAD+YMPVCRQHYVSGQV IETARTVVES K+  RTPA
Sbjct: 309 KETELIGGADMYMPVCRQHYVSGQVAIETARTVVESRKVGYRTPA 353

[Close]
BLAST of Lsi02G011250 vs. TrEMBL
Match: A0A0D2UIS2_GOSRA (Thymidine kinase OS=Gossypium raimondii GN=B456_010G249600 PE=3 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 8.0e-100
Identity = 201/287 (70.03%), Postives = 222/287 (77.35%), Query Frame = 1 

Query: 3   TISKMKSLVSSSSFSTLSPYFPITASPTFFSLPSKSTQCS-PIFTQVSNYFTFKTPRILF 62
           +IS MKSL+S   FS L  +FP T    FFSLPSK    S P F           P +  
Sbjct: 20  SISSMKSLISPP-FSPLILHFPKTKPFAFFSLPSKPPNVSYPKFLHAK-------PSMPS 79

Query: 63  PSKGISSAQNRTGQIAATLSP-PSGEIHVIVGPMFAGKTTTLLRRIQSESSNGRSVAIIK 122
           P   I S   R   I    S  P GE+HVIVGPMFAGKTTTLL RIQ+ES+NGR+VA+IK
Sbjct: 80  PRSPIFSIPIRQSHIETPQSSLPCGEVHVIVGPMFAGKTTTLLHRIQAESNNGRTVAVIK 139

Query: 123 SNKDTRYGLDSIVTHDGMKLPCWALPNLTSFKQKFGQGAYDKLDVIGIDEAQFFDDLYDF 182
           SNKDTRYGLDSIVTHDGMKLPCWAL NL+SF+QK G  AYD+LDVIGIDEAQFF+DLYDF
Sbjct: 140 SNKDTRYGLDSIVTHDGMKLPCWALANLSSFRQKIGPDAYDQLDVIGIDEAQFFEDLYDF 199

Query: 183 CREAADIDGKTVIVAGLDGDYLRRNFGSVLNIIPLADSVTKLTARCEICGNRAFFTLRKT 242
           C EAAD D KTVIVAGLDGDYLRR+FGSVLNIIPLA+SVTKLTARCE+CG RAFFTLRKT
Sbjct: 200 CCEAADHDCKTVIVAGLDGDYLRRSFGSVLNIIPLANSVTKLTARCELCGKRAFFTLRKT 259

Query: 243 EEKETELIGGADVYMPVCRQHYVSGQVVIETARTVVESHKLECRTPA 288
           +E ETELIGGA+VYMPVCRQHYV GQVVI  AR+V+ES KL+C T A
Sbjct: 260 DETETELIGGAEVYMPVCRQHYVDGQVVIGAARSVLESKKLQCGTCA 298

[Close]
BLAST of Lsi02G011250 vs. TrEMBL
Match: A0A0B0NWB9_GOSAR (Thymidine kinase OS=Gossypium arboreum GN=F383_05181 PE=3 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 1.2e-98
Identity = 198/285 (69.47%), Postives = 223/285 (78.25%), Query Frame = 1 

Query: 3   TISKMKSLVSSSSFSTLSPYFPITASPTFFSLPSKSTQCS-PIFTQVSNYFTFKTPRILF 62
           +IS MKSL+    FS LS +FP T    FFSLPSK+   S P F  V+       P +  
Sbjct: 5   SISSMKSLIFPP-FSPLSLHFPKTKPFAFFSLPSKTPNVSYPKFLHVN-------PSMPS 64

Query: 63  PSKGISSAQNRTGQIAATLSPP-SGEIHVIVGPMFAGKTTTLLRRIQSESSNGRSVAIIK 122
           P   I S   R   I    S    GE+HVIVGPMFAGKTTTLL RIQ+ES+NGR+VA+IK
Sbjct: 65  PRPPIFSIPIRQSHIETPQSSSLCGEVHVIVGPMFAGKTTTLLHRIQAESNNGRTVAVIK 124

Query: 123 SNKDTRYGLDSIVTHDGMKLPCWALPNLTSFKQKFGQGAYDKLDVIGIDEAQFFDDLYDF 182
           SNKDTRYGLDSIVTHDGMKLPCWAL +L+SF+ K G  AYD+LDVIGIDEAQFF+DLYDF
Sbjct: 125 SNKDTRYGLDSIVTHDGMKLPCWALASLSSFRLKIGPDAYDQLDVIGIDEAQFFEDLYDF 184

Query: 183 CREAADIDGKTVIVAGLDGDYLRRNFGSVLNIIPLADSVTKLTARCEICGNRAFFTLRKT 242
           C EAAD DGKTVIVAGLDGDYLRR+FGSVLNIIPLA+SVTKLTA+CE+CG RAFFTLRKT
Sbjct: 185 CCEAADHDGKTVIVAGLDGDYLRRSFGSVLNIIPLANSVTKLTAQCELCGKRAFFTLRKT 244

Query: 243 EEKETELIGGADVYMPVCRQHYVSGQVVIETARTVVESHKLECRT 286
           +E ETELIGGA+VYMPVCRQHYV GQVVI  AR+V+ES KL+C T
Sbjct: 245 DETETELIGGAEVYMPVCRQHYVDGQVVIGAARSVLESKKLQCGT 281

[Close]
BLAST of Lsi02G011250 vs. TrEMBL
Match: A0A067LDR5_JATCU (Thymidine kinase OS=Jatropha curcas GN=JCGZ_02929 PE=3 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 2.6e-98
Identity = 197/267 (73.78%), Postives = 217/267 (81.27%), Query Frame = 1 

Query: 21  PYFPI---TASPTFFSLPSK-STQCSPIFTQVSNYFTFKTPRILFPSKGISSAQNRTGQI 80
           P+ PI   T+S  FFSL SK     SP   +  N+   K P    P   I   QNR  Q 
Sbjct: 4   PFSPICRPTSSALFFSLASKYKFLSSPSTLKNVNFLPIKPP----PPVPIFPIQNRCLQS 63

Query: 81  AATLSPPSGEIHVIVGPMFAGKTTTLLRRIQSESSNGRSVAIIKSNKDTRYGLDSIVTHD 140
            ++ S  SGEIHVIVGPMFAGKTTTLLRRI+SES +GR+VAIIKSNKDTRYGLDSIVTHD
Sbjct: 64  KSSPSSSSGEIHVIVGPMFAGKTTTLLRRIESESRDGRNVAIIKSNKDTRYGLDSIVTHD 123

Query: 141 GMKLPCWALPNLTSFKQKFGQGAYDKLDVIGIDEAQFFDDLYDFCREAADIDGKTVIVAG 200
           G+KLPC ALPNL+SF+QKFG  AY++LDVIGIDEAQFF+DLYDFCREAAD DGKTVIVAG
Sbjct: 124 GLKLPCVALPNLSSFRQKFGADAYEQLDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAG 183

Query: 201 LDGDYLRRNFGSVLNIIPLADSVTKLTARCEICGNRAFFTLRKTEEKETELIGGADVYMP 260
           LDGDYLR++FGSVL+IIPLADSVTKLTARCEICG+RAFFTLRKTEE   ELIGGADVYMP
Sbjct: 184 LDGDYLRKSFGSVLDIIPLADSVTKLTARCEICGSRAFFTLRKTEETRVELIGGADVYMP 243

Query: 261 VCRQHYVSGQVVIE-TARTVVESHKLE 283
           VCRQHYVSGQVVIE  AR VVES K+E
Sbjct: 244 VCRQHYVSGQVVIEAAARIVVESQKVE 266

[Close]
BLAST of Lsi02G011250 vs. TrEMBL
Match: A0A0B2REH6_GLYSO (Thymidine kinase OS=Glycine soja GN=glysoja_009947 PE=3 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 5.8e-98
Identity = 197/283 (69.61%), Postives = 226/283 (79.86%), Query Frame = 1 

Query: 7   MKSLVSSSSFSTLSPYFPITASP-TFFSLPSKST-----QCSPIFTQVSNYFTFKTPRIL 66
           MKSL++   FS LSP     ASP   FSLPS+ST     + +P   ++ N      P   
Sbjct: 1   MKSLLNPK-FSALSP----KASPFALFSLPSQSTTRFSFRSNP--RRIPNRLLRLNPPPF 60

Query: 67  FPSKGISSAQNRTGQIAATLSPPSGEIHVIVGPMFAGKTTTLLRRIQSESSNGRSVAIIK 126
             +  I + QNR+ Q   +  PPSGEIHVIVGPMFAGKTT+LLRRIQSE++NGR+VAIIK
Sbjct: 61  SSNNFICAIQNRSLQTEPS-PPPSGEIHVIVGPMFAGKTTSLLRRIQSETANGRNVAIIK 120

Query: 127 SNKDTRYGLDSIVTHDGMKLPCWALPNLTSFKQKFGQGAYDKLDVIGIDEAQFFDDLYDF 186
           S+KDTRYGLDSIVTHDG KLPCWAL NL+SFKQKFG  AY+KLDVIGIDEAQFFDDLY+F
Sbjct: 121 SSKDTRYGLDSIVTHDGAKLPCWALANLSSFKQKFGMDAYEKLDVIGIDEAQFFDDLYEF 180

Query: 187 CREAADIDGKTVIVAGLDGDYLRRNFGSVLNIIPLADSVTKLTARCEICGNRAFFTLRKT 246
           CR+AAD DGKTVIVAGLDG+YLRR+FGSVL+IIPLADSVTKLTARCEICG RA FTLRKT
Sbjct: 181 CRQAADHDGKTVIVAGLDGNYLRRSFGSVLDIIPLADSVTKLTARCEICGKRACFTLRKT 240

Query: 247 EEKETELIGGADVYMPVCRQHYVSGQVVIETARTVVESHKLEC 284
           ++K+ ELIGG DVYMPVCRQHYVSGQV +E  R V+ES K+EC
Sbjct: 241 QDKQIELIGGVDVYMPVCRQHYVSGQVAMEATRHVLESKKVEC 275

[Close]
BLAST of Lsi02G011250 vs. TAIR10
Match: AT5G23070.1 (AT5G23070.1 Thymidine kinase)

HSP 1 Score: 308.9 bits (790), Expect = 3.2e-84
Identity = 163/274 (59.49%), Postives = 208/274 (75.91%), Query Frame = 1 

Query: 7   MKSLVSSSSFSTLSPYFPITASPTFFSLPSK-STQCSPIFTQVSNYFTFKTPRILFPSKG 66
           M++L+S S    L+P+      P+ FS   + S   + I    S   T  T ++   +  
Sbjct: 6   MRTLISPS----LAPFSLHLHKPSLFSTALRFSFSINNITPTNSPPSTISTRKLQTKATR 65

Query: 67  ISSAQNRTGQIAATLSPPSGEIHVIVGPMFAGKTTTLLRRIQSESSNGRSVAIIKSNKDT 126
           ++S+ +   Q  ++ SP  GEIHV+VGPMF+GKTTTLLRRI +E   G+ +AIIKSNKDT
Sbjct: 66  VTSSSS--SQPLSSSSP--GEIHVVVGPMFSGKTTTLLRRILAERETGKRIAIIKSNKDT 125

Query: 127 RYGLDSIVTHDGMKLPCWALPNLTSFKQKFGQGAYD-KLDVIGIDEAQFFDDLYDFCREA 186
           RY  +SIVTHDG K PCW+LP+L+SFK++FG   Y+ +LDVIGIDEAQFF DLY+FCREA
Sbjct: 126 RYCTESIVTHDGEKYPCWSLPDLSSFKERFGFDDYENRLDVIGIDEAQFFGDLYEFCREA 185

Query: 187 ADIDGKTVIVAGLDGDYLRRNFGSVLNIIPLADSVTKLTARCEICGNRAFFTLRKTEEKE 246
           AD +GKTVIVAGLDGD++RR FGSVL++IP+AD+VTKLT+RCE+CG RA FT+RKTEEKE
Sbjct: 186 ADKEGKTVIVAGLDGDFMRRRFGSVLDLIPIADTVTKLTSRCEVCGKRALFTMRKTEEKE 245

Query: 247 TELIGGADVYMPVCRQHYVSGQVVIETARTVVES 279
           TELIGGA+VYMPVCR HYV GQ V+ETAR V++S
Sbjct: 246 TELIGGAEVYMPVCRSHYVCGQNVLETARAVLDS 271

[Close]
BLAST of Lsi02G011250 vs. TAIR10
Match: AT3G07800.1 (AT3G07800.1 Thymidine kinase)

HSP 1 Score: 300.1 bits (767), Expect = 1.5e-81
Identity = 138/194 (71.13%), Postives = 171/194 (88.14%), Query Frame = 1 

Query: 84  SGEIHVIVGPMFAGKTTTLLRRIQSESSNGRSVAIIKSNKDTRYGLDSIVTHDGMKLPCW 143
           SG +HVI+GPMF+GK+T+LLRRI+SE S+GRSVA++KS+KDTRY  DS+VTHDG+  PCW
Sbjct: 30  SGAVHVIMGPMFSGKSTSLLRRIKSEISDGRSVAMLKSSKDTRYAKDSVVTHDGIGFPCW 89

Query: 144 ALPNLTSFKQKFGQGAYDKLDVIGIDEAQFFDDLYDFCREAADIDGKTVIVAGLDGDYLR 203
           ALP+L SF +KFG  AY+KLDVIGIDEAQFF DLY+FC + AD DGK VIVAGLDGDYLR
Sbjct: 90  ALPDLMSFPEKFGLDAYNKLDVIGIDEAQFFGDLYEFCCKVADDDGKIVIVAGLDGDYLR 149

Query: 204 RNFGSVLNIIPLADSVTKLTARCEICGNRAFFTLRKTEEKETELIGGADVYMPVCRQHYV 263
           R+FG+VL+IIP+ADSVTKLTARCE+CG++AFFTLRK  +  TELIGGADVYMPVCR+HY+
Sbjct: 150 RSFGAVLDIIPIADSVTKLTARCEVCGHKAFFTLRKNCDTRTELIGGADVYMPVCRKHYI 209

Query: 264 SGQVVIETARTVVE 278
           +  +VI+ ++ V+E
Sbjct: 210 TNHIVIKASKKVLE 223

[Close]
BLAST of Lsi02G011250 vs. NCBI nr
Match: gi|659127259|ref|XP_008463610.1| (PREDICTED: thymidine kinase-like [Cucumis melo])

HSP 1 Score: 504.6 bits (1298), Expect = 1.1e-139
Identity = 249/281 (88.61%), Postives = 263/281 (93.59%), Query Frame = 1 

Query: 7   MKSLVSSSSFSTLSPYFPITASPTFFSLPSKSTQCSPIFTQVSNYFTFKTPRILFPSKGI 66
           MKSLVSSSSFS LSPYFPI+ASP+FFSLPSKS QC P+FTQVSN+FTFKTP    PSKG 
Sbjct: 1   MKSLVSSSSFSILSPYFPISASPSFFSLPSKSAQCGPMFTQVSNFFTFKTPTTSLPSKGF 60

Query: 67  SSAQNRTGQIAATLSPPSGEIHVIVGPMFAGKTTTLLRRIQSESSNGRSVAIIKSNKDTR 126
            S QNR  Q  A+LSPPSGEIHVI+GPMFAGKTTTLLRRIQSES NGR+VAIIKSNKDTR
Sbjct: 61  FSTQNRNPQTRASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGRNVAIIKSNKDTR 120

Query: 127 YGLDSIVTHDGMKLPCWALPNLTSFKQKFGQGAYDKLDVIGIDEAQFFDDLYDFCREAAD 186
           YGLDSIVTHDGMKLPCWA+PNL+SFK+KFGQG+YDKLDVIGIDEAQFFDDLYDFC EAAD
Sbjct: 121 YGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCCEAAD 180

Query: 187 IDGKTVIVAGLDGDYLRRNFGSVLNIIPLADSVTKLTARCEICGNRAFFTLRKTEEKETE 246
           IDGKTVIVAGLDGDYLRRNFGSVL+IIPLADSVTKLTARCEICGNRAFFTLRKT+EKETE
Sbjct: 181 IDGKTVIVAGLDGDYLRRNFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTQEKETE 240

Query: 247 LIGGADVYMPVCRQHYVSGQVVIETARTVVESHKLECRTPA 288
           LIGGADVYMPVCRQHYVSGQVVIE ARTVVES K+ECRTPA
Sbjct: 241 LIGGADVYMPVCRQHYVSGQVVIEAARTVVESRKVECRTPA 281

[Close]
BLAST of Lsi02G011250 vs. NCBI nr
Match: gi|700209940|gb|KGN65036.1| (Thymidine kinase [Cucumis sativus])

HSP 1 Score: 500.4 bits (1287), Expect = 2.2e-138
Identity = 248/285 (87.02%), Postives = 264/285 (92.63%), Query Frame = 1 

Query: 3   TISKMKSLVSSSSFSTLSPYFPITASPTFFSLPSKSTQCSPIFTQVSNYFTFKTPRILFP 62
           TIS MKS V SSSFS LSPYFPI+ASP+FFSLPSKS QC P+FTQ+SN+FTFKTP I  P
Sbjct: 69  TISNMKSFVFSSSFSILSPYFPISASPSFFSLPSKSAQCGPMFTQLSNFFTFKTPTISLP 128

Query: 63  SKGISSAQNRTGQIAATLSPPSGEIHVIVGPMFAGKTTTLLRRIQSESSNGRSVAIIKSN 122
           SKG  S QNR  Q+ A+LSPPSGEIHVI+GPMFAGKTTTLLRRIQSES NGRSVAIIKSN
Sbjct: 129 SKGFFSTQNRNPQMRASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGRSVAIIKSN 188

Query: 123 KDTRYGLDSIVTHDGMKLPCWALPNLTSFKQKFGQGAYDKLDVIGIDEAQFFDDLYDFCR 182
           KDTRYGLDSIVTHDGMKLPCWA+PNL+SFK+KFGQG+YDKLDVIGIDEAQFFDDLYDFC 
Sbjct: 189 KDTRYGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCC 248

Query: 183 EAADIDGKTVIVAGLDGDYLRRNFGSVLNIIPLADSVTKLTARCEICGNRAFFTLRKTEE 242
           EAADIDGKTVIVAGLDGDYLRRNFGSVL+IIPLADSVTKLTARCEICGNRAFFTLRKT+E
Sbjct: 249 EAADIDGKTVIVAGLDGDYLRRNFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTQE 308

Query: 243 KETELIGGADVYMPVCRQHYVSGQVVIETARTVVESHKLECRTPA 288
           KETELIGGAD+YMPVCRQHYVSGQV IETARTVVES K+  RTPA
Sbjct: 309 KETELIGGADMYMPVCRQHYVSGQVAIETARTVVESRKVGYRTPA 353

[Close]
BLAST of Lsi02G011250 vs. NCBI nr
Match: gi|778659746|ref|XP_011654956.1| (PREDICTED: thymidine kinase [Cucumis sativus])

HSP 1 Score: 495.7 bits (1275), Expect = 5.3e-137
Identity = 245/281 (87.19%), Postives = 261/281 (92.88%), Query Frame = 1 

Query: 7   MKSLVSSSSFSTLSPYFPITASPTFFSLPSKSTQCSPIFTQVSNYFTFKTPRILFPSKGI 66
           MKS V SSSFS LSPYFPI+ASP+FFSLPSKS QC P+FTQ+SN+FTFKTP I  PSKG 
Sbjct: 1   MKSFVFSSSFSILSPYFPISASPSFFSLPSKSAQCGPMFTQLSNFFTFKTPTISLPSKGF 60

Query: 67  SSAQNRTGQIAATLSPPSGEIHVIVGPMFAGKTTTLLRRIQSESSNGRSVAIIKSNKDTR 126
            S QNR  Q+ A+LSPPSGEIHVI+GPMFAGKTTTLLRRIQSES NGRSVAIIKSNKDTR
Sbjct: 61  FSTQNRNPQMRASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGRSVAIIKSNKDTR 120

Query: 127 YGLDSIVTHDGMKLPCWALPNLTSFKQKFGQGAYDKLDVIGIDEAQFFDDLYDFCREAAD 186
           YGLDSIVTHDGMKLPCWA+PNL+SFK+KFGQG+YDKLDVIGIDEAQFFDDLYDFC EAAD
Sbjct: 121 YGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCCEAAD 180

Query: 187 IDGKTVIVAGLDGDYLRRNFGSVLNIIPLADSVTKLTARCEICGNRAFFTLRKTEEKETE 246
           IDGKTVIVAGLDGDYLRRNFGSVL+IIPLADSVTKLTARCEICGNRAFFTLRKT+EKETE
Sbjct: 181 IDGKTVIVAGLDGDYLRRNFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTQEKETE 240

Query: 247 LIGGADVYMPVCRQHYVSGQVVIETARTVVESHKLECRTPA 288
           LIGGAD+YMPVCRQHYVSGQV IETARTVVES K+  RTPA
Sbjct: 241 LIGGADMYMPVCRQHYVSGQVAIETARTVVESRKVGYRTPA 281

[Close]
BLAST of Lsi02G011250 vs. NCBI nr
Match: gi|1021508407|ref|XP_016197554.1| (PREDICTED: thymidine kinase a-like [Arachis ipaensis])

HSP 1 Score: 375.2 bits (962), Expect = 1.0e-100
Identity = 199/279 (71.33%), Postives = 226/279 (81.00%), Query Frame = 1 

Query: 7   MKSLVSSSSFSTLSPYFPITASPTFFSLPSKSTQCSPIFTQVSNYFTFKTPRIL-FPSKG 66
           MKS+++   FS LSP+ P T+  + FS P  S     IF + S    F + +   F S  
Sbjct: 1   MKSILNPK-FSALSPHLPKTSPFSLFSRPHDS-----IFRKNSQQLPFPSLKATPFSSNS 60

Query: 67  -ISSAQNRTGQIAATLSPPSGEIHVIVGPMFAGKTTTLLRRIQSESSNGRSVAIIKSNKD 126
            +S AQNRT Q   T  PPSGEIHVIVGPMFAGKTTTLLRRIQSES+N ++VAIIKS+KD
Sbjct: 61  FLSRAQNRTLQTEPT-RPPSGEIHVIVGPMFAGKTTTLLRRIQSESANSKNVAIIKSSKD 120

Query: 127 TRYGLDSIVTHDGMKLPCWALPNLTSFKQKFGQGAYDKLDVIGIDEAQFFDDLYDFCREA 186
           TRYGLDSIVTHDG KLPCWAL NL+SFKQKFG  AY+KLDVIGIDEAQFF+DLYDFCREA
Sbjct: 121 TRYGLDSIVTHDGAKLPCWALTNLSSFKQKFGIEAYEKLDVIGIDEAQFFEDLYDFCREA 180

Query: 187 ADIDGKTVIVAGLDGDYLRRNFGSVLNIIPLADSVTKLTARCEICGNRAFFTLRKTEEKE 246
           AD DGKTVIVAGLDG+YLRR+FGSVL+IIPLAD+VTKLTA CEICG RAFFTLRKT+EK+
Sbjct: 181 ADHDGKTVIVAGLDGNYLRRSFGSVLDIIPLADTVTKLTALCEICGKRAFFTLRKTQEKQ 240

Query: 247 TELIGGADVYMPVCRQHYVSGQVVIETARTVVESHKLEC 284
            ELIGG DVYMPVCR HYV+GQV +E AR V+ESHK+EC
Sbjct: 241 VELIGGGDVYMPVCRHHYVNGQVAVEAARFVLESHKVEC 272

[Close]
BLAST of Lsi02G011250 vs. NCBI nr
Match: gi|743893916|ref|XP_011040200.1| (PREDICTED: thymidine kinase-like [Populus euphratica])

HSP 1 Score: 374.4 bits (960), Expect = 1.8e-100
Identity = 200/283 (70.67%), Postives = 225/283 (79.51%), Query Frame = 1 

Query: 2   LTISKMKSLVSSS-SFSTLSPYFPITASPTFFSLPSKSTQCSPIFTQVSNYFTFKTPRIL 61
           +TIS+MK+L+  + SFS +S    I  +  FFSL SKS   S +   VS YF  K   I 
Sbjct: 4   ITISRMKALIIPTFSFSPMSKR-AIPLASNFFSLASKSNLFSNLQNPVS-YFPLKPSMIS 63

Query: 62  FPSKGISSAQNRTGQIAATLSPPSGEIHVIVGPMFAGKTTTLLRRIQSESSNGRSVAIIK 121
            PS      Q R     ++LS  SGEIHVIVGPMFAGKTTTLL R+Q+E ++GR+VAIIK
Sbjct: 64  LPSN--FPIQTRCVHSKSSLSSSSGEIHVIVGPMFAGKTTTLLHRVQAEINDGRNVAIIK 123

Query: 122 SNKDTRYGLDSIVTHDGMKLPCWALPNLTSFKQKFGQGAYDKLDVIGIDEAQFFDDLYDF 181
           SNKD RYGLDS+VTHDG+KLPC ALPNL+SFKQ FGQ AYD+LDVIGIDEAQFF DLYDF
Sbjct: 124 SNKDNRYGLDSVVTHDGVKLPCCALPNLSSFKQSFGQDAYDQLDVIGIDEAQFFGDLYDF 183

Query: 182 CREAADIDGKTVIVAGLDGDYLRRNFGSVLNIIPLADSVTKLTARCEICGNRAFFTLRKT 241
           CRE AD DGKTVIVAGLDGDYLRRNFGSVL+IIPLADSVTKL+ARCEICG RAFFTLRKT
Sbjct: 184 CREVADHDGKTVIVAGLDGDYLRRNFGSVLDIIPLADSVTKLSARCEICGKRAFFTLRKT 243

Query: 242 EEKETELIGGADVYMPVCRQHYVSGQVVIETARTVVESHKLEC 284
           EE +TELIGGADVYMPVCRQHYVSGQV +E AR V+ES K +C
Sbjct: 244 EETQTELIGGADVYMPVCRQHYVSGQVAVEAARMVLESQKAQC 282

The following BLAST results are available for this feature:
BLAST of Lsi02G011250 vs. Swiss-Prot
Match NameE-valueIdentityDescription
KITH_ORYSJ1.6e-8569.60Thymidine kinase OS=Oryza sativa subsp. japonica GN=TK PE=2 SV=2[more]
KITHB_ARATH5.7e-8359.49Thymidine kinase b OS=Arabidopsis thaliana GN=TK1B PE=1 SV=1[more]
KITHA_ARATH2.7e-8071.13Thymidine kinase a OS=Arabidopsis thaliana GN=TK1A PE=1 SV=1[more]
KITH_SWPVK1.9e-3845.00Thymidine kinase OS=Swinepox virus (strain Kasza) GN=TK PE=3 SV=1[more]
KITH_CHICK3.4e-3545.36Thymidine kinase, cytosolic OS=Gallus gallus GN=TK1 PE=1 SV=1[more]
BLAST of Lsi02G011250 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LYL4_CUCSA1.5e-13887.02Thymidine kinase OS=Cucumis sativus GN=Csa_1G181480 PE=3 SV=1[more]
A0A0D2UIS2_GOSRA8.0e-10070.03Thymidine kinase OS=Gossypium raimondii GN=B456_010G249600 PE=3 SV=1[more]
A0A0B0NWB9_GOSAR1.2e-9869.47Thymidine kinase OS=Gossypium arboreum GN=F383_05181 PE=3 SV=1[more]
A0A067LDR5_JATCU2.6e-9873.78Thymidine kinase OS=Jatropha curcas GN=JCGZ_02929 PE=3 SV=1[more]
A0A0B2REH6_GLYSO5.8e-9869.61Thymidine kinase OS=Glycine soja GN=glysoja_009947 PE=3 SV=1[more]
BLAST of Lsi02G011250 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G23070.13.2e-8459.49 Thymidine kinase[more]
AT3G07800.11.5e-8171.13 Thymidine kinase[more]
BLAST of Lsi02G011250 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659127259|ref|XP_008463610.1|1.1e-13988.61PREDICTED: thymidine kinase-like [Cucumis melo][more]
gi|700209940|gb|KGN65036.1|2.2e-13887.02Thymidine kinase [Cucumis sativus][more]
gi|778659746|ref|XP_011654956.1|5.3e-13787.19PREDICTED: thymidine kinase [Cucumis sativus][more]
gi|1021508407|ref|XP_016197554.1|1.0e-10071.33PREDICTED: thymidine kinase a-like [Arachis ipaensis][more]
gi|743893916|ref|XP_011040200.1|1.8e-10070.67PREDICTED: thymidine kinase-like [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0004797thymidine kinase activity
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR020633Thymidine_kinase_CS
IPR001267Thymidine_kinase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009157 deoxyribonucleoside monophosphate biosynthetic process
biological_process GO:0071897 DNA biosynthetic process
biological_process GO:0016310 phosphorylation
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0046104 thymidine metabolic process
biological_process GO:0006230 TMP biosynthetic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0004797 thymidine kinase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G011250.1Lsi02G011250.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001267Thymidine kinasePANTHERPTHR11441THYMIDINE KINASEcoord: 71..283
score: 8.3E
IPR001267Thymidine kinasePFAMPF00265TKcoord: 85..262
score: 3.3
IPR020633Thymidine kinase, conserved sitePROSITEPS00603TK_CELLULAR_TYPEcoord: 249..262
scor
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 85..223
score: 7.8
NoneNo IPR availableGENE3DG3DSA:3.30.60.20coord: 223..264
score: 9.0
NoneNo IPR availablePANTHERPTHR11441:SF2THYMIDINE KINASEcoord: 71..283
score: 8.3E
NoneNo IPR availableunknownSSF57716Glucocorticoid receptor-like (DNA-binding domain)coord: 223..265
score: 8.55

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi02G011250Csa1G181480Cucumber (Chinese Long) v2culsiB032
Lsi02G011250CSPI01G15760Wild cucumber (PI 183967)cpilsiB033
Lsi02G011250Cucsa.180490Cucumber (Gy14) v1cgylsiB302
Lsi02G011250CmaCh18G006010Cucurbita maxima (Rimu)cmalsiB369
Lsi02G011250CmoCh18G005930Cucurbita moschata (Rifu)cmolsiB359
Lsi02G011250Cla009043Watermelon (97103) v1lsiwmB201
Lsi02G011250MELO3C025541Melon (DHL92) v3.5.1lsimeB181
Lsi02G011250ClCG01G010620Watermelon (Charleston Gray)lsiwcgB169
Lsi02G011250MELO3C025541.2Melon (DHL92) v3.6.1lsimedB184
Lsi02G011250Cla97C01G010410Watermelon (97103) v2lsiwmbB153
Lsi02G011250Bhi08G000630Wax gourdlsiwgoB257
Lsi02G011250Cp4.1LG09g06410Cucurbita pepo (Zucchini)cpelsiB027
Lsi02G011250CsGy1G015460Cucumber (Gy14) v2cgyblsiB029
Lsi02G011250Carg25612Silver-seed gourdcarlsiB046
Lsi02G011250CsaV3_1G017040Cucumber (Chinese Long) v3cuclsiB033
Lsi02G011250CsaV3_UNG053440Cucumber (Chinese Long) v3cuclsiB518
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi02G011250Bottle gourd (USVL1VR-Ls)lsilsiB064
Lsi02G011250Cucumber (Gy14) v1cgylsiB024
Lsi02G011250Cucurbita maxima (Rimu)cmalsiB205
Lsi02G011250Cucurbita maxima (Rimu)cmalsiB207
Lsi02G011250Cucurbita moschata (Rifu)cmolsiB195
Lsi02G011250Cucurbita moschata (Rifu)cmolsiB197
Lsi02G011250Cucurbita pepo (Zucchini)cpelsiB426
Lsi02G011250Cucurbita pepo (Zucchini)cpelsiB417
Lsi02G011250Wild cucumber (PI 183967)cpilsiB038
Lsi02G011250Wild cucumber (PI 183967)cpilsiB447
Lsi02G011250Cucumber (Chinese Long) v2culsiB037
Lsi02G011250Watermelon (Charleston Gray)lsiwcgB175
Lsi02G011250Cucumber (Gy14) v2cgyblsiB038
Lsi02G011250Cucumber (Gy14) v2cgyblsiB407
Lsi02G011250Silver-seed gourdcarlsiB947
Lsi02G011250Silver-seed gourdcarlsiB949
Lsi02G011250Cucumber (Chinese Long) v3cuclsiB470
Lsi02G011250Watermelon (97103) v2lsiwmbB160