Cp4.1LG09g06410 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG09g06410
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Thymidine kinase
Location	Cp4.1LG09 : 4934278 .. 4937986 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGGGAACGTAGCTTCAACAAAGCAGAGTTTGGGGCAAACCAAACCCCAACCTCTCCGCTCTCCAAATCAAAATTTACAGACCTTTCTCAACCCTTTGCCAAAACCCCATCAAAACCCTCCTCAATACGCTTATGCTACCCATTTCTAAGATGAAATCCTTCGTATCATCATCATCTTTCTCAACCCTCTCGCCCTATTTCCCCATTACCGCTTCTCCAACCCTCTCTTTGGCTTCTAAATCGACGCAATGCAACCCTATATTCACTCAGTTGTCCAATTTTTTCTCTCTGAAAACGCCCAGAAACCAGGGGTTTTCAACCCAGAAACGAAGTGCCCGAATGGTAGCTTCTTTGTCACTGCCCTCCGGCGAGGTTCATGTGATAGTAGGGCCGATGTTTGCTGGGAAAACAACCTCCCTTCTTCGGCGGATTCAGTCCGAGAGCATCAATGGCAGGTATTTTATGCTCTGATTTTGTGCTTCTATTCATTAATCTAATGGGTTGCGAGTGTTTATTGTAATGTTTTCTCTAGTCTCTTTTGGACTTGTCTCGCTTGTATTTCTAAGTTTCTACGATTAATGGAAATGGGGCTTATTGGTATGATAGTAGGTGGTAAGTTTGCTAATAGATTGGGAGAATTTGTATTGGCTTCAATAATAGCATGAGGGTATCCAATAAGAAATGAGAAGAAATTGGCATTCTAAGGTTGTGTTAAGATGCTCTAATACCATGTTAAGAATGAGAAACAAAAATGGGATTGAAAGTCCTCTGTTCCGTTCTCTGTCACTTTCTTCCGTTCTTCCGTTCTTCCTCTTCTCCCGCTCTGATACCATGTTAAGAATGAACCTATATCTCTCTTTCTTAACAGTTTTGAACGGTTCTAATATGATTATTCTTGTCTATGCGTACAAATTCTCAATAATAGAGTCATGCATATTGGTGATAACCGAGGGGTTAGGCTGAAATATGATGTGGGTTTTGGCCTCTTGATAACGAATGAGTTAATCGGGGGAATTGACAAGCTGAGTTATGATTCTTTGGGGGAAATGCTCTAAAAAGAAGCACAAAAAATAACTAAATCCCAAGCTTTCCCTAGTTTTCCTTAGCTCTTTTGAAAGAATTTCCCCTTTAACGTAGCTCTCAACACTCTAGAAGGCAGCCCTTTTAACATTAGACCATATGACCTTGACTCTTTCTTTGAAACAAGGCTACTGATACATAGACATTGTTGCACCAAGTTCTAAGGTCTAACAGTTTCCATTTGAACTGTAAAATAAAGAAACATTCAAGAAGTAGGCGACTTGCATTTTCACAATGCCTTTTGGCTTTTGCAAATGTATGCACCAGTTCAGTTGGATTGTACAATTTGGCGTTAGATCTTATAATTTGGAGATGATACAAGAGTTCACTGGTGATCACCTACTTGGGATTTGATAACTTGGATTGAATTTGTGCTATGATGTATCTTGATTGGTGTAGAAGCCTCTTTTTTGGGTACAATTCATAAGAATTATTATTTTTTACAGAAGTGTAGCCATTATTAAGTCGAATAAAGACACAAGATATGGACTGGATTCGATTGTGACGCACGATGGCATGAAGTTGCCTTGCTGGGCATTACCGAACTTATCGTCTTTCAAACAAAAGTTTGGTGAAGGTGCTTATGACAAGGTATGATAATCCTACCTTCTTAAGGAAAGCTTGATATCTCTCTATGAGGCTAAAGATTTGGTTTGCAGTTAGAATGAGCAGATAGCTGACTAATTGGGCATACTGATTTTCCTGTAAACTAAATTTTTAGTTCGGTTTTGATAATGGTATGATAGCTAGATGTGATTGGAATTGATGAAGCTCAATTCTTCGATGATCTTTACGATTTCTGTCGTGAAGCTGCTGATATGGATGGCAAAACAGTAATAGTTGCTGGGTTGGATGGGGATTACTTGAGGTATTATCAAAGTTACTGGCGTAGTTTTCGTTCGTTCATTCGAAATATTTGAATTATTTTCTTCAAAACTGATGGCCTGTACACATTCAATAAAATGTCATATTGATTTAAACTGAATACGCATTAGTAACTCAGCTAAAGCTTTTTTGTGTTGGGGTTTATCTGAAAAACATGAACAGGAGGAGCTTTGGTTCAGTTCTTGATATAATTCCGCTTGCCGATTCTGTAACAAAGTTAACTGCTCGATGCGAGATCTGCGGGAATCGAGCTTTCTTTACATTAAGGAAGACAGAAGAAAAAGAGACGGAGCTGATTGGTGGTGCTGACACGTATATGCCCGTATGTCGACAACATTATGTTAGCGGGCAAGTAGTGATAGAGACAGCAAGAACTGTAGTAGAAGAAGCACACAAGGTTGAGTTTACGACCACAGCATAGTTGTTCCTAGTAGTAGGTCTGCAGAATCACATACAGCCCAGCAGCCTATGCCGAAACATAGCAGTTGTTCGGTTGCCCCGACGACTATGGTAAACAAGGAACGGGCGATTTTGGGAACGGATGGAATTACGGTAAGCATTTAGTCAGAGTTGAAGAGAAGAGTGTAGCAGCAGGGGGAGGGAGGGCGTTGTGCTGTAGGTTTAGAAAATGGGATTGTTTTCATGGATTGGATGATAGGGAAAAAGGAGTGAATGGTATGTCATATGTATTTGTGTTAGTTGAAAACTCAATTCATTATTGAGGGAGGAGGAGACATTCATGTGTGTATTATTGGGTAAGTTGTTGATCACACACCTGTTTCTTGTATTCTCAGTTTCCATTGCAATATAGCAACTACTTTTCATAATTAATTAATGAAAAAGTTGTTTGGGTCTGACCTATACATGTTGAAAAGTTAAAAGAAAAGTTATATTTTCTTCGAATGCATGTGATAGGATCGTGAGATCTCATATTGGTTGGAGAGAGAAACAAAATATTCCTTACAACTCTTCTTAGTGGATGTGTTACAAAACATACCTGTTGGAGAGAAACATTCCTTGAAACGTAACAGGTAAAAGTGCAGAATATCTGCTAGCAGTAGGCTTTGTCTCCTTATTTCTTCACTGTGGATTCTCGTGTCATTTTCTTGGAAAGATATTAGATCACCGTGGGACACTTTAAAATGAGTAATGGAGACCATTCCTTTATTCACACAAACCCTTCAATGACTTATCGACTGCCTTGCTTGAGGAAGAGTTTCACTAAAATTGAGACAAACCGGAATAAAGAAGTTAATCTCAATGTCTATTACAAGAAAGGTGAGAAATAGCGGTCAATCGTTGGATCTTGGGATGCAAAATGAAGCATTGTTGACAAACCACTTTCCTCAAGACTCAACCTAATGGCATGAGGTAAGTCATCAATCATGTAATACTCACATCATTTTCCTACTGCCAATGGAGTTTTGTCTCACTAACAGAGTATCTCAATAACTTATTCACTTCTAATTTCTCTCCATATACACATAAATACATATTTTCCAAGAATCTGAAACAGAAACAGAAACAGAAACAGAAACAATTATACTCCAGAAAAAAAGAAACAACATTATTTAGGCATCCTATGAACCATAGAGTATCCCACCACCGGATGATCCAAACCATTCTAAGTGTTCAATTATTTGTTGAGTTTATAAAGTATCCACAAAGACCAAGGTAAACACATCATATACATTCCAAGTTTATAACGATATCTATTTCTTTCTTTAAAATCGAAGGTTTAACC

mRNA sequence

CTGGGAACGTAGCTTCAACAAAGCAGAGTTTGGGGCAAACCAAACCCCAACCTCTCCGCTCTCCAAATCAAAATTTACAGACCTTTCTCAACCCTTTGCCAAAACCCCATCAAAACCCTCCTCAATACGCTTATGCTACCCATTTCTAAGATGAAATCCTTCGTATCATCATCATCTTTCTCAACCCTCTCGCCCTATTTCCCCATTACCGCTTCTCCAACCCTCTCTTTGGCTTCTAAATCGACGCAATGCAACCCTATATTCACTCAGTTGTCCAATTTTTTCTCTCTGAAAACGCCCAGAAACCAGGGGTTTTCAACCCAGAAACGAAGTGCCCGAATGGTAGCTTCTTTGTCACTGCCCTCCGGCGAGGTTCATGTGATAGTAGGGCCGATGTTTGCTGGGAAAACAACCTCCCTTCTTCGGCGGATTCAGTCCGAGAGCATCAATGGCAGAAGTGTAGCCATTATTAAGTCGAATAAAGACACAAGATATGGACTGGATTCGATTGTGACGCACGATGGCATGAAGTTGCCTTGCTGGGCATTACCGAACTTATCGTCTTTCAAACAAAAGTTTGGTGAAGGTGCTTATGACAAGCTAGATGTGATTGGAATTGATGAAGCTCAATTCTTCGATGATCTTTACGATTTCTGTCGTGAAGCTGCTGATATGGATGGCAAAACAGTAATAGTTGCTGGGTTGGATGGGGATTACTTGAGGAGGAGCTTTGGTTCAGTTCTTGATATAATTCCGCTTGCCGATTCTGTAACAAAGTTAACTGCTCGATGCGAGATCTGCGGGAATCGAGCTTTCTTTACATTAAGGAAGACAGAAGAAAAAGAGACGGAGCTGATTGGTGGTGCTGACACGTATATGCCCGTATGTCGACAACATTATGTTAGCGGGCAAGTAGTGATAGAGACAGCAAGAACTGTAGTAGAAGAAGCACACAAGGTTGAGTTTACGACCACAGCATAGTTGTTCCTAGTAGTAGGTCTGCAGAATCACATACAGCCCAGCAGCCTATGCCGAAACATAGCAGTTGTTCGGTTGCCCCGACGACTATGGTAAACAAGGAACGGGCGATTTTGGGAACGGATGGAATTACGGTAAGCATTTAGTCAGAGTTGAAGAGAAGAGTGTAGCAGCAGGGGGAGGGAGGGCGTTGTGCTGTAGGTTTAGAAAATGGGATTGTTTTCATGGATTGGATGATAGGGAAAAAGGAGTGAATGGTATGTCATATGTATTTGTGTTAGTTGAAAACTCAATTCATTATTGAGGGAGGAGGAGACATTCATGTGTGTATTATTGGGTAAGTTGTTGATCACACACCTGTTTCTTGTATTCTCAGTTTCCATTGCAATATAGCAACTACTTTTCATAATTAATTAATGAAAAAGTTGTTTGGGTCTGACCTATACATGTTGAAAAGTTAAAAGAAAAGTTATATTTTCTTCGAATGCATGTGATAGGATCGTGAGATCTCATATTGGTTGGAGAGAGAAACAAAATATTCCTTACAACTCTTCTTAGTGGATGTGTTACAAAACATACCTGTTGGAGAGAAACATTCCTTGAAACGTAACAGGTAAAAGTGCAGAATATCTGCTAGCAGTAGGCTTTGTCTCCTTATTTCTTCACTGTGGATTCTCGTGTCATTTTCTTGGAAAGATATTAGATCACCGTGGGACACTTTAAAATGAGTAATGGAGACCATTCCTTTATTCACACAAACCCTTCAATGACTTATCGACTGCCTTGCTTGAGGAAGAGTTTCACTAAAATTGAGACAAACCGGAATAAAGAAGTTAATCTCAATGTCTATTACAAGAAAGGTGAGAAATAGCGGTCAATCGTTGGATCTTGGGATGCAAAATGAAGCATTGTTGACAAACCACTTTCCTCAAGACTCAACCTAATGGCATGAGGTAAGTCATCAATCATGTAATACTCACATCATTTTCCTACTGCCAATGGAGTTTTGTCTCACTAACAGAGTATCTCAATAACTTATTCACTTCTAATTTCTCTCCATATACACATAAATACATATTTTCCAAGAATCTGAAACAGAAACAGAAACAGAAACAGAAACAATTATACTCCAGAAAAAAAGAAACAACATTATTTAGGCATCCTATGAACCATAGAGTATCCCACCACCGGATGATCCAAACCATTCTAAGTGTTCAATTATTTGTTGAGTTTATAAAGTATCCACAAAGACCAAGGTAAACACATCATATACATTCCAAGTTTATAACGATATCTATTTCTTTCTTTAAAATCGAAGGTTTAACC

Coding sequence (CDS)

ATGCTACCCATTTCTAAGATGAAATCCTTCGTATCATCATCATCTTTCTCAACCCTCTCGCCCTATTTCCCCATTACCGCTTCTCCAACCCTCTCTTTGGCTTCTAAATCGACGCAATGCAACCCTATATTCACTCAGTTGTCCAATTTTTTCTCTCTGAAAACGCCCAGAAACCAGGGGTTTTCAACCCAGAAACGAAGTGCCCGAATGGTAGCTTCTTTGTCACTGCCCTCCGGCGAGGTTCATGTGATAGTAGGGCCGATGTTTGCTGGGAAAACAACCTCCCTTCTTCGGCGGATTCAGTCCGAGAGCATCAATGGCAGAAGTGTAGCCATTATTAAGTCGAATAAAGACACAAGATATGGACTGGATTCGATTGTGACGCACGATGGCATGAAGTTGCCTTGCTGGGCATTACCGAACTTATCGTCTTTCAAACAAAAGTTTGGTGAAGGTGCTTATGACAAGCTAGATGTGATTGGAATTGATGAAGCTCAATTCTTCGATGATCTTTACGATTTCTGTCGTGAAGCTGCTGATATGGATGGCAAAACAGTAATAGTTGCTGGGTTGGATGGGGATTACTTGAGGAGGAGCTTTGGTTCAGTTCTTGATATAATTCCGCTTGCCGATTCTGTAACAAAGTTAACTGCTCGATGCGAGATCTGCGGGAATCGAGCTTTCTTTACATTAAGGAAGACAGAAGAAAAAGAGACGGAGCTGATTGGTGGTGCTGACACGTATATGCCCGTATGTCGACAACATTATGTTAGCGGGCAAGTAGTGATAGAGACAGCAAGAACTGTAGTAGAAGAAGCACACAAGGTTGAGTTTACGACCACAGCATAG

Protein sequence

MLPISKMKSFVSSSSFSTLSPYFPITASPTLSLASKSTQCNPIFTQLSNFFSLKTPRNQGFSTQKRSARMVASLSLPSGEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKSNKDTRYGLDSIVTHDGMKLPCWALPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFCREAADMDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTEEKETELIGGADTYMPVCRQHYVSGQVVIETARTVVEEAHKVEFTTTA

Homology

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BLAST of Cp4.1LG09g06410 vs. Swiss-Prot
Match: KITH_ORYSJ (Thymidine kinase OS=Oryza sativa subsp. japonica GN=TK PE=2 SV=2)

HSP 1 Score: 310.5 bits (794), Expect = 1.9e-83
Identity = 167/270 (61.85%), Postives = 197/270 (72.96%), Query Frame = 1


Query: 7   MKSFVSSSSFSTLSPYFPITASPTLSLASKSTQCNPIFTQLSNFFSLKTPRNQGFSTQKR 66
           M+S +++S+F          ASP L   S+     P    LS F  ++       +  K 
Sbjct: 1   MRSLLAASTFLRSG------ASPLLRPLSRPL---PSRLNLSRFGPVRPVSAAAAAADKS 60

Query: 67  ----SARMVASLSLPSGEVHVIVGPMFAGKTTSLLRRIQSESING-RSVAIIKSNKDTRY 126
                + M A  S P GE+HVIVGPMFAGKTT+LLRR+Q E+  G R+VA+IKS+KD RY
Sbjct: 61  RGGGGSAMEAQPSYP-GEIHVIVGPMFAGKTTALLRRVQVEAGTGSRNVALIKSDKDNRY 120

Query: 127 GLDSIVTHDGMKLPCWALPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFCREAADM 186
           GLDS+VTHDG K+PCWALP LSSF+ K G  AYDK+DVIGIDEAQFFDDL+DFC +AAD 
Sbjct: 121 GLDSVVTHDGTKMPCWALPELSSFQDKLGTEAYDKVDVIGIDEAQFFDDLHDFCCKAADR 180

Query: 187 DGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTEEKETEL 246
           DGK V+VAGLDGDY R  FGSVLDIIPLADSVTKLTARCE+CG RAFFTLRKT E +TEL
Sbjct: 181 DGKIVVVAGLDGDYKRNKFGSVLDIIPLADSVTKLTARCELCGRRAFFTLRKTRETKTEL 240

Query: 247 IGGADTYMPVCRQHYVSGQVVIETARTVVE 272
           IGGAD YMPVCRQHY+ GQ+VIE  R V++
Sbjct: 241 IGGADVYMPVCRQHYLDGQIVIEATRIVLD 260

[Close]

BLAST of Cp4.1LG09g06410 vs. Swiss-Prot
Match: KITHB_ARATH (Thymidine kinase b OS=Arabidopsis thaliana GN=TK1B PE=1 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 3.7e-82
Identity = 160/263 (60.84%), Postives = 199/263 (75.67%), Query Frame = 1


Query: 28  SPTLSLASKSTQCNPIFTQLSNF-FSLK--TPRNQGFST------QKRSARMVASLSLPS 87
           SP+L+  S       +F+    F FS+   TP N   ST      Q ++ R+ +S S   
Sbjct: 11  SPSLAPFSLHLHKPSLFSTALRFSFSINNITPTNSPPSTISTRKLQTKATRVTSSSSSQP 70

Query: 88  ------GEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKSNKDTRYGLDSIVTHDGM 147
                 GE+HV+VGPMF+GKTT+LLRRI +E   G+ +AIIKSNKDTRY  +SIVTHDG 
Sbjct: 71  LSSSSPGEIHVVVGPMFSGKTTTLLRRILAERETGKRIAIIKSNKDTRYCTESIVTHDGE 130

Query: 148 KLPCWALPNLSSFKQKFGEGAYD-KLDVIGIDEAQFFDDLYDFCREAADMDGKTVIVAGL 207
           K PCW+LP+LSSFK++FG   Y+ +LDVIGIDEAQFF DLY+FCREAAD +GKTVIVAGL
Sbjct: 131 KYPCWSLPDLSSFKERFGFDDYENRLDVIGIDEAQFFGDLYEFCREAADKEGKTVIVAGL 190

Query: 208 DGDYLRRSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTEEKETELIGGADTYMPV 267
           DGD++RR FGSVLD+IP+AD+VTKLT+RCE+CG RA FT+RKTEEKETELIGGA+ YMPV
Sbjct: 191 DGDFMRRRFGSVLDLIPIADTVTKLTSRCEVCGKRALFTMRKTEEKETELIGGAEVYMPV 250

Query: 268 CRQHYVSGQVVIETARTVVEEAH 275
           CR HYV GQ V+ETAR V++ ++
Sbjct: 251 CRSHYVCGQNVLETARAVLDSSN 273

[Close]

BLAST of Cp4.1LG09g06410 vs. Swiss-Prot
Match: KITHA_ARATH (Thymidine kinase a OS=Arabidopsis thaliana GN=TK1A PE=1 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 5.3e-81
Identity = 141/198 (71.21%), Postives = 172/198 (86.87%), Query Frame = 1


Query: 78  SGEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKSNKDTRYGLDSIVTHDGMKLPCW 137
           SG VHVI+GPMF+GK+TSLLRRI+SE  +GRSVA++KS+KDTRY  DS+VTHDG+  PCW
Sbjct: 30  SGAVHVIMGPMFSGKSTSLLRRIKSEISDGRSVAMLKSSKDTRYAKDSVVTHDGIGFPCW 89

Query: 138 ALPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFCREAADMDGKTVIVAGLDGDYLR 197
           ALP+L SF +KFG  AY+KLDVIGIDEAQFF DLY+FC + AD DGK VIVAGLDGDYLR
Sbjct: 90  ALPDLMSFPEKFGLDAYNKLDVIGIDEAQFFGDLYEFCCKVADDDGKIVIVAGLDGDYLR 149

Query: 198 RSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTEEKETELIGGADTYMPVCRQHYV 257
           RSFG+VLDIIP+ADSVTKLTARCE+CG++AFFTLRK  +  TELIGGAD YMPVCR+HY+
Sbjct: 150 RSFGAVLDIIPIADSVTKLTARCEVCGHKAFFTLRKNCDTRTELIGGADVYMPVCRKHYI 209

Query: 258 SGQVVIETARTVVEEAHK 276
           +  +VI+ ++ V+E++ K
Sbjct: 210 TNHIVIKASKKVLEDSDK 227

[Close]

BLAST of Cp4.1LG09g06410 vs. Swiss-Prot
Match: KITH_SWPVK (Thymidine kinase OS=Swinepox virus (strain Kasza) GN=TK PE=3 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 6.5e-39
Identity = 80/180 (44.44%), Postives = 116/180 (64.44%), Query Frame = 1


Query: 79  GEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKSNKDTRYGLDSIVTHDGMKLPCWA 138
           G +H+I+GPMF+GK+T L+R +    I   +  +IK +KD RYG D++ THD   +   +
Sbjct: 4   GFIHLILGPMFSGKSTELIRLVNRYQIATYNCRVIKYSKDNRYGNDAVYTHDKCYISAVS 63

Query: 139 LPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFCREAADMDGKTVIVAGLDGDYLRR 198
             +L   K        D +D++GIDE QFF+D+ +FC   A+  GK VIVA LDG Y R+
Sbjct: 64  TDSLFDIKDTL-----DDVDIVGIDEGQFFNDIVEFCEYIANK-GKIVIVAALDGTYERK 123

Query: 199 SFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTEEKETELIGGADTYMPVCRQHYVS 258
            FG++L++IPL++ VTKL A C IC   A F+ R ++EKE ELIGG + Y+ VCR  Y++
Sbjct: 124 PFGNILNLIPLSEKVTKLNAICMICHRDASFSKRLSDEKEIELIGGKEKYLSVCRSCYLT 177

[Close]

BLAST of Cp4.1LG09g06410 vs. Swiss-Prot
Match: KITH_CHICK (Thymidine kinase, cytosolic OS=Gallus gallus GN=TK1 PE=1 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.2e-35
Identity = 81/183 (44.26%), Postives = 113/183 (61.75%), Query Frame = 1


Query: 77  PSGEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKSNKDTRYGLDSIVTHDGMKL-- 136
           P G++ VI GPMF+GK+T L+RR++   +      ++K  KDTRY    + THD   +  
Sbjct: 17  PRGQIQVIFGPMFSGKSTELMRRVRRFQLAQYRCLLVKYAKDTRYCTTGVSTHDRNTMEA 76

Query: 137 -PCWALPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFCREAADMDGKTVIVAGLDG 196
            P  AL ++  +++  G        VIGIDE QFF D+ +FC + A+  GKTVIVA LDG
Sbjct: 77  RPACALQDV--YQEALGSA------VIGIDEGQFFPDIVEFCEKMANT-GKTVIVAALDG 136

Query: 197 DYLRRSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTEEKETELIGGADTYMPVCR 256
            + R++FGS+L+++PLA+SV KL A C  C   A +T R   E+E E+IGGAD Y  VCR
Sbjct: 137 TFQRKAFGSILNLVPLAESVVKLNAVCMECYREASYTKRLGAEREVEVIGGADKYHSVCR 190

[Close]

BLAST of Cp4.1LG09g06410 vs. TrEMBL
Match: A0A0A0LYL4_CUCSA (Thymidine kinase OS=Cucumis sativus GN=Csa_1G181480 PE=3 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 2.4e-125
Identity = 237/285 (83.16%), Postives = 257/285 (90.18%), Query Frame = 1


Query: 4   ISKMKSFVSSSSFSTLSPYFPITASPTL-SLASKSTQCNPIFTQLSNFFSLKTPR----N 63
           IS MKSFV SSSFS LSPYFPI+ASP+  SL SKS QC P+FTQLSNFF+ KTP     +
Sbjct: 70  ISNMKSFVFSSSFSILSPYFPISASPSFFSLPSKSAQCGPMFTQLSNFFTFKTPTISLPS 129

Query: 64  QGF-STQKRSARMVASLSLPSGEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKSNK 123
           +GF STQ R+ +M ASLS PSGE+HVI+GPMFAGKTT+LLRRIQSES NGRSVAIIKSNK
Sbjct: 130 KGFFSTQNRNPQMRASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGRSVAIIKSNK 189

Query: 124 DTRYGLDSIVTHDGMKLPCWALPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFCRE 183
           DTRYGLDSIVTHDGMKLPCWA+PNLSSFK+KFG+G+YDKLDVIGIDEAQFFDDLYDFC E
Sbjct: 190 DTRYGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCCE 249

Query: 184 AADMDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTEEK 243
           AAD+DGKTVIVAGLDGDYLRR+FGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKT+EK
Sbjct: 250 AADIDGKTVIVAGLDGDYLRRNFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTQEK 309

Query: 244 ETELIGGADTYMPVCRQHYVSGQVVIETARTVVEEAHKVEFTTTA 283
           ETELIGGAD YMPVCRQHYVSGQV IETARTVV E+ KV + T A
Sbjct: 310 ETELIGGADMYMPVCRQHYVSGQVAIETARTVV-ESRKVGYRTPA 353

[Close]

BLAST of Cp4.1LG09g06410 vs. TrEMBL
Match: A0A067GT29_CITSI (Thymidine kinase OS=Citrus sinensis GN=CISIN_1g023563mg PE=3 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 3.7e-97
Identity = 193/274 (70.44%), Postives = 220/274 (80.29%), Query Frame = 1


Query: 1   MLPISKMKSFVSSSSFSTLSPYFPITASPTLSLASKSTQCNPIFTQLSN---FFSLKTPR 60
           M  IS+MK  ++     +L+P   +  S   +LASKS   NP  T L N     S+ +PR
Sbjct: 1   MSTISRMKCLITPPF--SLTP-ISLHLSKATTLASKSCFLNPA-TSLRNPKFIHSMVSPR 60

Query: 61  NQGFSTQKRSARMVASLSLPSGEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKSNK 120
              FS Q R+    AS+S PSGE+HVIVGPMFAGKTT+LLRRIQ+E+  GR+VA+IKSNK
Sbjct: 61  PPLFSLQNRNLHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNK 120

Query: 121 DTRYGLDSIVTHDGMKLPCWALPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFCRE 180
           DTRYGLDSIVTHDG+KLPC AL  LSSF+QKFG  AYD++DVIGIDEAQFF+DLYDFCRE
Sbjct: 121 DTRYGLDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCRE 180

Query: 181 AADMDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTEEK 240
           AAD DGKTVIVAGLDGDYLRRSFGSV+DIIPLADSVTKLTARCE CG RAFFTLRKTEE 
Sbjct: 181 AADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEET 240

Query: 241 ETELIGGADTYMPVCRQHYVSGQVVIETARTVVE 272
           +TELIGG+D YMPVCRQHYVSGQVV+E AR V+E
Sbjct: 241 KTELIGGSDIYMPVCRQHYVSGQVVVEAARIVLE 270

[Close]

BLAST of Cp4.1LG09g06410 vs. TrEMBL
Match: A0A067LDR5_JATCU (Thymidine kinase OS=Jatropha curcas GN=JCGZ_02929 PE=3 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 1.4e-96
Identity = 189/257 (73.54%), Postives = 211/257 (82.10%), Query Frame = 1


Query: 24  PITASPTLSLASK-STQCNPIFTQLSNFFSLKTPRNQG-FSTQKRSARMVASLSLPSGEV 83
           P +++   SLASK     +P   +  NF  +K P     F  Q R  +  +S S  SGE+
Sbjct: 11  PTSSALFFSLASKYKFLSSPSTLKNVNFLPIKPPPPVPIFPIQNRCLQSKSSPSSSSGEI 70

Query: 84  HVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKSNKDTRYGLDSIVTHDGMKLPCWALPN 143
           HVIVGPMFAGKTT+LLRRI+SES +GR+VAIIKSNKDTRYGLDSIVTHDG+KLPC ALPN
Sbjct: 71  HVIVGPMFAGKTTTLLRRIESESRDGRNVAIIKSNKDTRYGLDSIVTHDGLKLPCVALPN 130

Query: 144 LSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFCREAADMDGKTVIVAGLDGDYLRRSFG 203
           LSSF+QKFG  AY++LDVIGIDEAQFF+DLYDFCREAAD DGKTVIVAGLDGDYLR+SFG
Sbjct: 131 LSSFRQKFGADAYEQLDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRKSFG 190

Query: 204 SVLDIIPLADSVTKLTARCEICGNRAFFTLRKTEEKETELIGGADTYMPVCRQHYVSGQV 263
           SVLDIIPLADSVTKLTARCEICG+RAFFTLRKTEE   ELIGGAD YMPVCRQHYVSGQV
Sbjct: 191 SVLDIIPLADSVTKLTARCEICGSRAFFTLRKTEETRVELIGGADVYMPVCRQHYVSGQV 250

Query: 264 VIETARTVVEEAHKVEF 279
           VIE A  +V E+ KVEF
Sbjct: 251 VIEAAARIVVESQKVEF 267

[Close]

BLAST of Cp4.1LG09g06410 vs. TrEMBL
Match: I3SNW4_LOTJA (Thymidine kinase OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 6.5e-94
Identity = 190/276 (68.84%), Postives = 215/276 (77.90%), Query Frame = 1


Query: 7   MKSFVSSSSFSTLSPYFPITASPTLSLASKSTQCNPIFTQLSNFFSLK----TPRNQGFS 66
           MKS ++    + LSP  P  +S  L     S    P  T++ N   L     + RN   +
Sbjct: 1   MKSILNPKLSAALSPNLPKFSSFAL-FPRPSEFMTPFPTRIPNHLRLNPTHFSSRNMIPT 60

Query: 67  TQKRSARMVASLSLPS-GEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKSNKDTRY 126
           TQ RS +  +S S  S GE+HVIVGPMFAGKTTSL+RRIQSES NGR+VAIIKS+KDTRY
Sbjct: 61  TQNRSLQSESSASASSSGEIHVIVGPMFAGKTTSLIRRIQSESGNGRNVAIIKSSKDTRY 120

Query: 127 GLDSIVTHDGMKLPCWALPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFCREAADM 186
           GLDSIVTHDG KLPCWAL NLSSFKQKFG  AY++LDVIGIDEAQFFDDLYDFCREAAD 
Sbjct: 121 GLDSIVTHDGTKLPCWALANLSSFKQKFGVDAYEQLDVIGIDEAQFFDDLYDFCREAADH 180

Query: 187 DGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTEEKETEL 246
           DGKTV+VAGLDG+YLRR+FGSVLDIIPLADSVTKLTARCEICG  AFFTLRKT+E + EL
Sbjct: 181 DGKTVVVAGLDGNYLRRNFGSVLDIIPLADSVTKLTARCEICGKHAFFTLRKTQETQVEL 240

Query: 247 IGGADTYMPVCRQHYVSGQVVIETARTVVEEAHKVE 278
           IGG D YMPVCRQHYV+GQV +ET R V+ E+ KVE
Sbjct: 241 IGGVDVYMPVCRQHYVNGQVAMETTRLVL-ESQKVE 274

[Close]

BLAST of Cp4.1LG09g06410 vs. TrEMBL
Match: A0A0D2UIS2_GOSRA (Thymidine kinase OS=Gossypium raimondii GN=B456_010G249600 PE=3 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 3.2e-93
Identity = 194/276 (70.29%), Postives = 216/276 (78.26%), Query Frame = 1


Query: 1   MLP--ISKMKSFVSSSSFSTLSPYFPITAS-PTLSLASKSTQCN-PIFTQLSNFFSLKTP 60
           MLP  IS MKS +S   FS L  +FP T      SL SK    + P F       S+ +P
Sbjct: 16  MLPTSISSMKSLISPP-FSPLILHFPKTKPFAFFSLPSKPPNVSYPKFLHAKP--SMPSP 75

Query: 61  RNQGFSTQKRSARM-VASLSLPSGEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKS 120
           R+  FS   R + +     SLP GEVHVIVGPMFAGKTT+LL RIQ+ES NGR+VA+IKS
Sbjct: 76  RSPIFSIPIRQSHIETPQSSLPCGEVHVIVGPMFAGKTTTLLHRIQAESNNGRTVAVIKS 135

Query: 121 NKDTRYGLDSIVTHDGMKLPCWALPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFC 180
           NKDTRYGLDSIVTHDGMKLPCWAL NLSSF+QK G  AYD+LDVIGIDEAQFF+DLYDFC
Sbjct: 136 NKDTRYGLDSIVTHDGMKLPCWALANLSSFRQKIGPDAYDQLDVIGIDEAQFFEDLYDFC 195

Query: 181 REAADMDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTE 240
            EAAD D KTVIVAGLDGDYLRRSFGSVL+IIPLA+SVTKLTARCE+CG RAFFTLRKT+
Sbjct: 196 CEAADHDCKTVIVAGLDGDYLRRSFGSVLNIIPLANSVTKLTARCELCGKRAFFTLRKTD 255

Query: 241 EKETELIGGADTYMPVCRQHYVSGQVVIETARTVVE 272
           E ETELIGGA+ YMPVCRQHYV GQVVI  AR+V+E
Sbjct: 256 ETETELIGGAEVYMPVCRQHYVDGQVVIGAARSVLE 288

[Close]

BLAST of Cp4.1LG09g06410 vs. TAIR10
Match: AT5G23070.1 (AT5G23070.1 Thymidine kinase)

HSP 1 Score: 306.2 bits (783), Expect = 2.1e-83
Identity = 160/263 (60.84%), Postives = 199/263 (75.67%), Query Frame = 1


Query: 28  SPTLSLASKSTQCNPIFTQLSNF-FSLK--TPRNQGFST------QKRSARMVASLSLPS 87
           SP+L+  S       +F+    F FS+   TP N   ST      Q ++ R+ +S S   
Sbjct: 11  SPSLAPFSLHLHKPSLFSTALRFSFSINNITPTNSPPSTISTRKLQTKATRVTSSSSSQP 70

Query: 88  ------GEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKSNKDTRYGLDSIVTHDGM 147
                 GE+HV+VGPMF+GKTT+LLRRI +E   G+ +AIIKSNKDTRY  +SIVTHDG 
Sbjct: 71  LSSSSPGEIHVVVGPMFSGKTTTLLRRILAERETGKRIAIIKSNKDTRYCTESIVTHDGE 130

Query: 148 KLPCWALPNLSSFKQKFGEGAYD-KLDVIGIDEAQFFDDLYDFCREAADMDGKTVIVAGL 207
           K PCW+LP+LSSFK++FG   Y+ +LDVIGIDEAQFF DLY+FCREAAD +GKTVIVAGL
Sbjct: 131 KYPCWSLPDLSSFKERFGFDDYENRLDVIGIDEAQFFGDLYEFCREAADKEGKTVIVAGL 190

Query: 208 DGDYLRRSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTEEKETELIGGADTYMPV 267
           DGD++RR FGSVLD+IP+AD+VTKLT+RCE+CG RA FT+RKTEEKETELIGGA+ YMPV
Sbjct: 191 DGDFMRRRFGSVLDLIPIADTVTKLTSRCEVCGKRALFTMRKTEEKETELIGGAEVYMPV 250

Query: 268 CRQHYVSGQVVIETARTVVEEAH 275
           CR HYV GQ V+ETAR V++ ++
Sbjct: 251 CRSHYVCGQNVLETARAVLDSSN 273

[Close]

BLAST of Cp4.1LG09g06410 vs. TAIR10
Match: AT3G07800.1 (AT3G07800.1 Thymidine kinase)

HSP 1 Score: 302.4 bits (773), Expect = 3.0e-82
Identity = 141/198 (71.21%), Postives = 172/198 (86.87%), Query Frame = 1


Query: 78  SGEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKSNKDTRYGLDSIVTHDGMKLPCW 137
           SG VHVI+GPMF+GK+TSLLRRI+SE  +GRSVA++KS+KDTRY  DS+VTHDG+  PCW
Sbjct: 30  SGAVHVIMGPMFSGKSTSLLRRIKSEISDGRSVAMLKSSKDTRYAKDSVVTHDGIGFPCW 89

Query: 138 ALPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFCREAADMDGKTVIVAGLDGDYLR 197
           ALP+L SF +KFG  AY+KLDVIGIDEAQFF DLY+FC + AD DGK VIVAGLDGDYLR
Sbjct: 90  ALPDLMSFPEKFGLDAYNKLDVIGIDEAQFFGDLYEFCCKVADDDGKIVIVAGLDGDYLR 149

Query: 198 RSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTEEKETELIGGADTYMPVCRQHYV 257
           RSFG+VLDIIP+ADSVTKLTARCE+CG++AFFTLRK  +  TELIGGAD YMPVCR+HY+
Sbjct: 150 RSFGAVLDIIPIADSVTKLTARCEVCGHKAFFTLRKNCDTRTELIGGADVYMPVCRKHYI 209

Query: 258 SGQVVIETARTVVEEAHK 276
           +  +VI+ ++ V+E++ K
Sbjct: 210 TNHIVIKASKKVLEDSDK 227

[Close]

BLAST of Cp4.1LG09g06410 vs. NCBI nr
Match: gi|700209940|gb|KGN65036.1| (Thymidine kinase [Cucumis sativus])

HSP 1 Score: 456.4 bits (1173), Expect = 3.5e-125
Identity = 237/285 (83.16%), Postives = 257/285 (90.18%), Query Frame = 1


Query: 4   ISKMKSFVSSSSFSTLSPYFPITASPTL-SLASKSTQCNPIFTQLSNFFSLKTPR----N 63
           IS MKSFV SSSFS LSPYFPI+ASP+  SL SKS QC P+FTQLSNFF+ KTP     +
Sbjct: 70  ISNMKSFVFSSSFSILSPYFPISASPSFFSLPSKSAQCGPMFTQLSNFFTFKTPTISLPS 129

Query: 64  QGF-STQKRSARMVASLSLPSGEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKSNK 123
           +GF STQ R+ +M ASLS PSGE+HVI+GPMFAGKTT+LLRRIQSES NGRSVAIIKSNK
Sbjct: 130 KGFFSTQNRNPQMRASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGRSVAIIKSNK 189

Query: 124 DTRYGLDSIVTHDGMKLPCWALPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFCRE 183
           DTRYGLDSIVTHDGMKLPCWA+PNLSSFK+KFG+G+YDKLDVIGIDEAQFFDDLYDFC E
Sbjct: 190 DTRYGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCCE 249

Query: 184 AADMDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTEEK 243
           AAD+DGKTVIVAGLDGDYLRR+FGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKT+EK
Sbjct: 250 AADIDGKTVIVAGLDGDYLRRNFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTQEK 309

Query: 244 ETELIGGADTYMPVCRQHYVSGQVVIETARTVVEEAHKVEFTTTA 283
           ETELIGGAD YMPVCRQHYVSGQV IETARTVV E+ KV + T A
Sbjct: 310 ETELIGGADMYMPVCRQHYVSGQVAIETARTVV-ESRKVGYRTPA 353

[Close]

BLAST of Cp4.1LG09g06410 vs. NCBI nr
Match: gi|778659746|ref|XP_011654956.1| (PREDICTED: thymidine kinase [Cucumis sativus])

HSP 1 Score: 453.4 bits (1165), Expect = 3.0e-124
Identity = 235/282 (83.33%), Postives = 255/282 (90.43%), Query Frame = 1


Query: 7   MKSFVSSSSFSTLSPYFPITASPTL-SLASKSTQCNPIFTQLSNFFSLKTPR----NQGF 66
           MKSFV SSSFS LSPYFPI+ASP+  SL SKS QC P+FTQLSNFF+ KTP     ++GF
Sbjct: 1   MKSFVFSSSFSILSPYFPISASPSFFSLPSKSAQCGPMFTQLSNFFTFKTPTISLPSKGF 60

Query: 67  -STQKRSARMVASLSLPSGEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKSNKDTR 126
            STQ R+ +M ASLS PSGE+HVI+GPMFAGKTT+LLRRIQSES NGRSVAIIKSNKDTR
Sbjct: 61  FSTQNRNPQMRASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGRSVAIIKSNKDTR 120

Query: 127 YGLDSIVTHDGMKLPCWALPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFCREAAD 186
           YGLDSIVTHDGMKLPCWA+PNLSSFK+KFG+G+YDKLDVIGIDEAQFFDDLYDFC EAAD
Sbjct: 121 YGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCCEAAD 180

Query: 187 MDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTEEKETE 246
           +DGKTVIVAGLDGDYLRR+FGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKT+EKETE
Sbjct: 181 IDGKTVIVAGLDGDYLRRNFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTQEKETE 240

Query: 247 LIGGADTYMPVCRQHYVSGQVVIETARTVVEEAHKVEFTTTA 283
           LIGGAD YMPVCRQHYVSGQV IETARTVV E+ KV + T A
Sbjct: 241 LIGGADMYMPVCRQHYVSGQVAIETARTVV-ESRKVGYRTPA 281

[Close]

BLAST of Cp4.1LG09g06410 vs. NCBI nr
Match: gi|659127259|ref|XP_008463610.1| (PREDICTED: thymidine kinase-like [Cucumis melo])

HSP 1 Score: 449.5 bits (1155), Expect = 4.3e-123
Identity = 232/282 (82.27%), Postives = 251/282 (89.01%), Query Frame = 1


Query: 7   MKSFVSSSSFSTLSPYFPITASPTL-SLASKSTQCNPIFTQLSNFFSLKTPRNQ-----G 66
           MKS VSSSSFS LSPYFPI+ASP+  SL SKS QC P+FTQ+SNFF+ KTP         
Sbjct: 1   MKSLVSSSSFSILSPYFPISASPSFFSLPSKSAQCGPMFTQVSNFFTFKTPTTSLPSKGF 60

Query: 67  FSTQKRSARMVASLSLPSGEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKSNKDTR 126
           FSTQ R+ +  ASLS PSGE+HVI+GPMFAGKTT+LLRRIQSES NGR+VAIIKSNKDTR
Sbjct: 61  FSTQNRNPQTRASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGRNVAIIKSNKDTR 120

Query: 127 YGLDSIVTHDGMKLPCWALPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFCREAAD 186
           YGLDSIVTHDGMKLPCWA+PNLSSFK+KFG+G+YDKLDVIGIDEAQFFDDLYDFC EAAD
Sbjct: 121 YGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCCEAAD 180

Query: 187 MDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTEEKETE 246
           +DGKTVIVAGLDGDYLRR+FGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKT+EKETE
Sbjct: 181 IDGKTVIVAGLDGDYLRRNFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTQEKETE 240

Query: 247 LIGGADTYMPVCRQHYVSGQVVIETARTVVEEAHKVEFTTTA 283
           LIGGAD YMPVCRQHYVSGQVVIE ARTVV E+ KVE  T A
Sbjct: 241 LIGGADVYMPVCRQHYVSGQVVIEAARTVV-ESRKVECRTPA 281

[Close]

BLAST of Cp4.1LG09g06410 vs. NCBI nr
Match: gi|359497110|ref|XP_002266298.2| (PREDICTED: thymidine kinase-like isoform X2 [Vitis vinifera])

HSP 1 Score: 363.6 bits (932), Expect = 3.1e-97
Identity = 198/279 (70.97%), Postives = 221/279 (79.21%), Query Frame = 1


Query: 6   KMKSFVSSSSFSTLSPYFPITASPTLS-LASKSTQCN------PIFTQLSNFFSLKTPRN 65
           +MKS +S S FSTLSP+   T S +L  LASKS  CN      P    + +  S   P  
Sbjct: 3   RMKSLLSPS-FSTLSPHLTKTTSFSLYFLASKSILCNSQILKNPDCLHIKSTISSMKPLM 62

Query: 66  QGFSTQKRSARMVASLSLPSGEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKSNKD 125
              S Q R  ++ AS S  SGE+HVIVGPMF+GKTT+LLRRIQSE+ NGR VAIIKSNKD
Sbjct: 63  SSNSIQSRRFQIEASQS-SSGEIHVIVGPMFSGKTTTLLRRIQSETSNGRKVAIIKSNKD 122

Query: 126 TRYGLDSIVTHDGMKLPCWALPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFCREA 185
           TRYGLDSIVTHDG+KLPCWAL +LSSF++K G  AYD+LDVIGIDEAQFF DLY+FC +A
Sbjct: 123 TRYGLDSIVTHDGVKLPCWALADLSSFREKLGSDAYDELDVIGIDEAQFFGDLYEFCCKA 182

Query: 186 ADMDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTEEKE 245
           AD DGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICG RAFFTLRKT EK+
Sbjct: 183 ADHDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGKRAFFTLRKTAEKK 242

Query: 246 TELIGGADTYMPVCRQHYVSGQVVIETARTVVEEAHKVE 278
           TELIGGAD YMPVCRQHYVSGQVVIE A  +V E+ KV+
Sbjct: 243 TELIGGADVYMPVCRQHYVSGQVVIEEATRIVLESQKVQ 279

[Close]

BLAST of Cp4.1LG09g06410 vs. NCBI nr
Match: gi|568825895|ref|XP_006467312.1| (PREDICTED: thymidine kinase [Citrus sinensis])

HSP 1 Score: 362.8 bits (930), Expect = 5.3e-97
Identity = 193/274 (70.44%), Postives = 220/274 (80.29%), Query Frame = 1


Query: 1   MLPISKMKSFVSSSSFSTLSPYFPITASPTLSLASKSTQCNPIFTQLSN---FFSLKTPR 60
           M  IS+MK  ++     +L+P   +  S   +LASKS   NP  T L N     S+ +PR
Sbjct: 1   MSTISRMKCLITPPF--SLTP-ISLHLSKATTLASKSCFLNPA-TSLRNPKFIHSMVSPR 60

Query: 61  NQGFSTQKRSARMVASLSLPSGEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKSNK 120
              FS Q R+    AS+S PSGE+HVIVGPMFAGKTT+LLRRIQ+E+  GR+VA+IKSNK
Sbjct: 61  PPLFSLQNRNLHSEASVSSPSGEIHVIVGPMFAGKTTTLLRRIQAETQKGRNVAVIKSNK 120

Query: 121 DTRYGLDSIVTHDGMKLPCWALPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFCRE 180
           DTRYGLDSIVTHDG+KLPC AL  LSSF+QKFG  AYD++DVIGIDEAQFF+DLYDFCRE
Sbjct: 121 DTRYGLDSIVTHDGVKLPCCALTTLSSFRQKFGSDAYDQVDVIGIDEAQFFEDLYDFCRE 180

Query: 181 AADMDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTEEK 240
           AAD DGKTVIVAGLDGDYLRRSFGSV+DIIPLADSVTKLTARCE CG RAFFTLRKTEE 
Sbjct: 181 AADHDGKTVIVAGLDGDYLRRSFGSVIDIIPLADSVTKLTARCEFCGKRAFFTLRKTEET 240

Query: 241 ETELIGGADTYMPVCRQHYVSGQVVIETARTVVE 272
           +TELIGG+D YMPVCRQHYVSGQVV+E AR V+E
Sbjct: 241 KTELIGGSDIYMPVCRQHYVSGQVVVEAARIVLE 270

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g06410 vs. Swiss-Prot


Match Name	E-value	Identity	Description
KITH_ORYSJ	1.9e-83	61.85	Thymidine kinase OS=Oryza sativa subsp. japonica GN=TK PE=2 SV=2	[more]
KITHB_ARATH	3.7e-82	60.84	Thymidine kinase b OS=Arabidopsis thaliana GN=TK1B PE=1 SV=1	[more]
KITHA_ARATH	5.3e-81	71.21	Thymidine kinase a OS=Arabidopsis thaliana GN=TK1A PE=1 SV=1	[more]
KITH_SWPVK	6.5e-39	44.44	Thymidine kinase OS=Swinepox virus (strain Kasza) GN=TK PE=3 SV=1	[more]
KITH_CHICK	1.2e-35	44.26	Thymidine kinase, cytosolic OS=Gallus gallus GN=TK1 PE=1 SV=1	[more]

BLAST of Cp4.1LG09g06410 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYL4_CUCSA	2.4e-125	83.16	Thymidine kinase OS=Cucumis sativus GN=Csa_1G181480 PE=3 SV=1	[more]
A0A067GT29_CITSI	3.7e-97	70.44	Thymidine kinase OS=Citrus sinensis GN=CISIN_1g023563mg PE=3 SV=1	[more]
A0A067LDR5_JATCU	1.4e-96	73.54	Thymidine kinase OS=Jatropha curcas GN=JCGZ_02929 PE=3 SV=1	[more]
I3SNW4_LOTJA	6.5e-94	68.84	Thymidine kinase OS=Lotus japonicus PE=2 SV=1	[more]
A0A0D2UIS2_GOSRA	3.2e-93	70.29	Thymidine kinase OS=Gossypium raimondii GN=B456_010G249600 PE=3 SV=1	[more]

BLAST of Cp4.1LG09g06410 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G23070.1	2.1e-83	60.84	Thymidine kinase	[more]
AT3G07800.1	3.0e-82	71.21	Thymidine kinase	[more]

BLAST of Cp4.1LG09g06410 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700209940\|gb\|KGN65036.1\|	3.5e-125	83.16	Thymidine kinase [Cucumis sativus]	[more]
gi\|778659746\|ref\|XP_011654956.1\|	3.0e-124	83.33	PREDICTED: thymidine kinase [Cucumis sativus]	[more]
gi\|659127259\|ref\|XP_008463610.1\|	4.3e-123	82.27	PREDICTED: thymidine kinase-like [Cucumis melo]	[more]
gi\|359497110\|ref\|XP_002266298.2\|	3.1e-97	70.97	PREDICTED: thymidine kinase-like isoform X2 [Vitis vinifera]	[more]
gi\|568825895\|ref\|XP_006467312.1\|	5.3e-97	70.44	PREDICTED: thymidine kinase [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0004797	thymidine kinase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR020633	Thymidine_kinase_CS
IPR001267	Thymidine_kinase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0006230	TMP biosynthetic process
biological_process	GO:0009157	deoxyribonucleoside monophosphate biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004797	thymidine kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g06410.1	Cp4.1LG09g06410.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001267	Thymidine kinase	PANTHER	PTHR11441	THYMIDINE KINASE	coord: 62..271 score: 5.4E
IPR001267	Thymidine kinase	PFAM	PF00265	TK	coord: 79..256 score: 4.8
IPR020633	Thymidine kinase, conserved site	PROSITE	PS00603	TK_CELLULAR_TYPE	coord: 243..256 scor
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 65..189 score: 6.
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 79..217 score: 7.62
None	No IPR available	GENE3D	G3DSA:3.30.60.20		coord: 217..258 score: 7.1
None	No IPR available	PANTHER	PTHR11441:SF2	THYMIDINE KINASE	coord: 62..271 score: 5.4E
None	No IPR available	unknown	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 217..259 score: 8.08

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG09g06410	Cucsa.180490	Cucumber (Gy14) v1	cgycpeB0495
Cp4.1LG09g06410	CmaCh18G006010	Cucurbita maxima (Rimu)	cmacpeB415
Cp4.1LG09g06410	CmoCh18G005930	Cucurbita moschata (Rifu)	cmocpeB375
Cp4.1LG09g06410	Cla009043	Watermelon (97103) v1	cpewmB041
Cp4.1LG09g06410	Csa1G181480	Cucumber (Chinese Long) v2	cpecuB020
Cp4.1LG09g06410	MELO3C025541	Melon (DHL92) v3.5.1	cpemeB028
Cp4.1LG09g06410	ClCG01G010620	Watermelon (Charleston Gray)	cpewcgB030
Cp4.1LG09g06410	CSPI01G15760	Wild cucumber (PI 183967)	cpecpiB017
Cp4.1LG09g06410	Lsi02G011250	Bottle gourd (USVL1VR-Ls)	cpelsiB027
Cp4.1LG09g06410	MELO3C025541.2	Melon (DHL92) v3.6.1	cpemedB035
Cp4.1LG09g06410	CsaV3_UNG053440	Cucumber (Chinese Long) v3	cpecucB0056
Cp4.1LG09g06410	CsaV3_1G017040	Cucumber (Chinese Long) v3	cpecucB0021
Cp4.1LG09g06410	Bhi08G000630	Wax gourd	cpewgoB0042
Cp4.1LG09g06410	CsGy1G015460	Cucumber (Gy14) v2	cgybcpeB007
Cp4.1LG09g06410	Carg25612	Silver-seed gourd	carcpeB0065

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG09g06410	Cucurbita pepo (Zucchini)	cpecpeB046
Cp4.1LG09g06410	Cucurbita pepo (Zucchini)	cpecpeB048
Cp4.1LG09g06410	Cucurbita maxima (Rimu)	cmacpeB215
Cp4.1LG09g06410	Cucurbita maxima (Rimu)	cmacpeB212
Cp4.1LG09g06410	Cucurbita moschata (Rifu)	cmocpeB182
Cp4.1LG09g06410	Cucurbita moschata (Rifu)	cmocpeB185
Cp4.1LG09g06410	Melon (DHL92) v3.6.1	cpemedB033
Cp4.1LG09g06410	Silver-seed gourd	carcpeB1443