CSPI01G15760 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGAGGAATGAAGAAATGCAACTCCGTACCCCAACAGTTGTAGTGGATATAAATGTTGTATGCCTTTCGGGGCAAACAAACCTGAAATGCGCTCCCAATTCACTCTCCAACAACCCCCCCCATGTTCAACAATTTACAAATATTTCCTATCTCCAAACCCAAAACCCCATTAAAACCCTCGTTCAATTGCTCATCTTCACAACCATTTCAAACATGAAATCCTTCGTATCTTCCTCCTCTTTCTCAATCCTCTCCCCCTACTTCCCCACTTCTGCTTCTCCATCCTTCTTTTCTTTGCCTTCTAAATCTGCGCAATGCGGCCCTATGTTCACCCAACTCTCTAATTTTTTCACTTTCAAAACACCCACTATTTCGTTGCCCTCGAAAGGGTTTTTTTCAACCCAGAATCGAAACCCCCAGATGAGGGCCTCTTTGTCACCGCCCTCTGGCGAGATTCATGTCATTCTGGGGCCGATGTTTGCTGGGAAAACTACCACTCTTCTTCGGCGGATTCAGTCCGAGAGCTGCAATGGCAGGTCTTTTATGCTTTGCTTTCCTTCTTCCGTTTATTAATTTTCTTTTTATCTTTTAATATATTCTCATCACTCTCTCTGTATTGGCTTGATTATTAGCATGGTTGGTATCGGTATGAAATGGGAAAAAAATCGTATTGAATTTACAACTTTATCCGCTATATTACTTCGATCGACACTGAATATGAGTGGTTGGGTGGATAAGTTATGGTGAATTTGATATTTTATACTATATCCCTACGAATTTCACAATAATAGAGTTATGCATATTGGTGCTGAATGAGGTTTAAGCTGATATATGATGTTGTGGGGTATGACCGCTTGATAGAGAATGAATTGAACGAGTGAATTGGCGAACTAAACTAACTGATTCTTTGAAGAGAAACCTTTAAATCCTTAATTTTTCCTTGCTCCTCGCTCCTCGCTCCCTTAACTCATTTTTTGAAACAAAAACAGAAAAACGTCTTTATTTTTTAGCTCAACATGGTAGAAGATAGCCTTATTAACGTTAGACCTCATGAACTTGGGTTTTTCTTTCAATGAAGACTGCTAATATGGAAACACTGTTGTACCAAGTTTAAAAGAGAATTCTCACCAAGGGGCTGGGTACATTTTCCTCTCAACCTGTAAAATATAGGAACGTTTAAACAGGTAACATTCATTTACACCATGCTTTCTGCAGAGTATGAAGCAAATCAATCTACTTATCTGCTATTTGCTGTTGGATCACATAGTTTGGAGATGATACAAGAGTTCAATGACATTTGTGAAATAGACCTTAGAGAGAACATGTTCAAGTCATAGTGGCCCTCTATCTAAAATTTAATATCATCTGAAATTTAATATCATATGAGTTTATTTGACAAGTAAATGTAGCAGAGCTAACCAGCCAGATTATTGCCCTGTGACAATTGTTGAAGGTGCTCAAGTTAGCTGGAATACTCTCAAGAGAAGAAATTTGTGGAGTTTTTGATAGATTTAATATTTCGATGCTCTTCCTTAGTCCATGTTCACATTCTGGATCTTCGATTAAGCGGTCTTTGTCATCATTTTCATTTGTAGAATCTTTTTTTTCTTTGGGTTGGCATCTTGTCTTCCCTATTTTATATCTTTATATTGAAAATATTTCCCTAGCTTCTTATATTACCTTTTAAAATGTTAGAACCTAATTACTTGGATGGAATGTGTACTCTGGTGTATCTTAATTGGTGTAGAAGCTTCCTTTTTTTGGTACAATTCAGAAGGTTTATTCCTTTTCCTTTTCATGCACTTTTTTTACAGAAGTGTAGCTATAATTAAGTCGAATAAAGACACAAGGTATGGATTGGATTCTATTGTTACACATGACGGCATGAAACTCCCTTGCTGGGCAATACCAAACTTATCATCTTTCAAAAAGAAATTTGGTCAAGGTTCTTATGACAAGGTATCATAATCTCTCTCTCTTTATGATGCCAATATCGTGCTTAGACATTTTATTAATTAAAATACGAAATATTCAAACCCTTATAAAAGGTAGCAAAGTATTTAAATCTATGAGGCTAAAAATTTGATTTCCAATTAAAATGAGCAGAAAACTGAATGAGTAGACTTCTGAATTAACCGTAATAATAGGAACTCCTGATTTTCTTGGTAACAGAATTGTTAATTTACATATGATGTTGGGGTGACAGCTAGATGTGATTGGAATTGATGAAGCTCAATTTTTCGACGATCTATATGATTTCTGCTGCGAAGCTGCTGATATTGATGGCAAAACAGTTATAGTTGCTGGGCTGGATGGGGATTACTTGAGGTATAATCAAATTTTCTGGCTTACTTTTGTTTCATACGTTTAATTTCAATGATGTTCTTAGAAACTGATGGCATTTCATATGGTAAAACATTCAATAGAACTTCAGATTGGTTTCTAAATTGACTGATCATTAGTAACTCAATTAAAGCTTTTGTGTTGGGGTTTATACAAAAAACTGAACAGGAGGAACTTCGGTTCAGTTCTCGATATAATTCCTCTTGCTGATTCTGTAACCAAGTTAACTGCTCGATGTGAAATCTGCGGGAATCGGGCTTTCTTTACTTTAAGGAAGACACAAGAAAAAGAGACTGAGCTGATTGGTGGTGCTGATATGTACATGCCCGTATGTCGACAACATTACGTCAGCGGGCAAGTAGCGATAGAGACAGCAAGAACTGTAGTAGAATCACGCAAGGTTGGGTATAGGACTCCAGCATAGTTCTTAGTAGGTAAAAGTAGGTCTTCGGCATCATATACATCCCCATGGTGAGCATAGTTGTAGGGTTAGGGATATTGTTTTGTTTAGAAACTGTAATTGAGTTAATTATGCCTGTATTTTGATGGCTGCTTTGATTGATTGGATTAGATGGAAGGAAAAAACGAGTCAAATGTTGTATGTAACCAACAAAATTGAAAACTAATACATTATTGGGGGAGGAGACATTCAAAGTGGCAACCATGTGTTAGTTTGGGAAGTTGTTGATCAGCCAGCTGTTTAGTTTGTTGATTGTAATTTCCAATAACTAATTTTCATAGCTTTTTTTCATAATTAAAGACATGAAAAGTTGTTAATAATTGAATTGGAC ATGGTGAGGAATGAAGAAATGCAACTCCGTACCCCAACAGTTGTAGTGGATATAAATGTTGTATGCCTTTCGGGGCAAACAAACCTGAAATGCGCTCCCAATTCACTCTCCAACAACCCCCCCCATGTTCAACAATTTACAAATATTTCCTATCTCCAAACCCAAAACCCCATTAAAACCCTCGTTCAATTGCTCATCTTCACAACCATTTCAAACATGAAATCCTTCGTATCTTCCTCCTCTTTCTCAATCCTCTCCCCCTACTTCCCCACTTCTGCTTCTCCATCCTTCTTTTCTTTGCCTTCTAAATCTGCGCAATGCGGCCCTATGTTCACCCAACTCTCTAATTTTTTCACTTTCAAAACACCCACTATTTCGTTGCCCTCGAAAGGGTTTTTTTCAACCCAGAATCGAAACCCCCAGATGAGGGCCTCTTTGTCACCGCCCTCTGGCGAGATTCATGTCATTCTGGGGCCGATGTTTGCTGGGAAAACTACCACTCTTCTTCGGCGGATTCAGTCCGAGAGCTGCAATGGCAGAAGTGTAGCTATAATTAAGTCGAATAAAGACACAAGGTATGGATTGGATTCTATTGTTACACATGACGGCATGAAACTCCCTTGCTGGGCAATACCAAACTTATCATCTTTCAAAAAGAAATTTGGTCAAGGTTCTTATGACAAGCTAGATGTGATTGGAATTGATGAAGCTCAATTTTTCGACGATCTATATGATTTCTGCTGCGAAGCTGCTGATATTGATGGCAAAACAGTTATAGTTGCTGGGCTGGATGGGGATTACTTGAGGAGGAACTTCGGTTCAGTTCTCGATATAATTCCTCTTGCTGATTCTGTAACCAAGTTAACTGCTCGATGTGAAATCTGCGGGAATCGGGCTTTCTTTACTTTAAGGAAGACACAAGAAAAAGAGACTGAGCTGATTGGTGGTGCTGATATGTACATGCCCGTATGTCGACAACATTACGTCAGCGGGCAAGTAGCGATAGAGACAGCAAGAACTGTAGTAGAATCACGCAAGGTTGGGTATAGGACTCCAGCATAG ATGGTGAGGAATGAAGAAATGCAACTCCGTACCCCAACAGTTGTAGTGGATATAAATGTTGTATGCCTTTCGGGGCAAACAAACCTGAAATGCGCTCCCAATTCACTCTCCAACAACCCCCCCCATGTTCAACAATTTACAAATATTTCCTATCTCCAAACCCAAAACCCCATTAAAACCCTCGTTCAATTGCTCATCTTCACAACCATTTCAAACATGAAATCCTTCGTATCTTCCTCCTCTTTCTCAATCCTCTCCCCCTACTTCCCCACTTCTGCTTCTCCATCCTTCTTTTCTTTGCCTTCTAAATCTGCGCAATGCGGCCCTATGTTCACCCAACTCTCTAATTTTTTCACTTTCAAAACACCCACTATTTCGTTGCCCTCGAAAGGGTTTTTTTCAACCCAGAATCGAAACCCCCAGATGAGGGCCTCTTTGTCACCGCCCTCTGGCGAGATTCATGTCATTCTGGGGCCGATGTTTGCTGGGAAAACTACCACTCTTCTTCGGCGGATTCAGTCCGAGAGCTGCAATGGCAGAAGTGTAGCTATAATTAAGTCGAATAAAGACACAAGGTATGGATTGGATTCTATTGTTACACATGACGGCATGAAACTCCCTTGCTGGGCAATACCAAACTTATCATCTTTCAAAAAGAAATTTGGTCAAGGTTCTTATGACAAGCTAGATGTGATTGGAATTGATGAAGCTCAATTTTTCGACGATCTATATGATTTCTGCTGCGAAGCTGCTGATATTGATGGCAAAACAGTTATAGTTGCTGGGCTGGATGGGGATTACTTGAGGAGGAACTTCGGTTCAGTTCTCGATATAATTCCTCTTGCTGATTCTGTAACCAAGTTAACTGCTCGATGTGAAATCTGCGGGAATCGGGCTTTCTTTACTTTAAGGAAGACACAAGAAAAAGAGACTGAGCTGATTGGTGGTGCTGATATGTACATGCCCGTATGTCGACAACATTACGTCAGCGGGCAAGTAGCGATAGAGACAGCAAGAACTGTAGTAGAATCACGCAAGGTTGGGTATAGGACTCCAGCATAG
BLAST of CSPI01G15760 vs. Swiss-Prot
Match: KITH_ORYSJ (Thymidine kinase OS=Oryza sativa subsp. japonica GN=TK PE=2 SV=2) HSP 1 Score: 318.2 bits (814), Expect = 1.2e-85 Identity = 152/206 (73.79%), Postives = 175/206 (84.95%), Query Frame = 1
BLAST of CSPI01G15760 vs. Swiss-Prot
Match: KITHB_ARATH (Thymidine kinase b OS=Arabidopsis thaliana GN=TK1B PE=1 SV=1) HSP 1 Score: 304.3 bits (778), Expect = 1.7e-81 Identity = 162/279 (58.06%), Postives = 207/279 (74.19%), Query Frame = 1
BLAST of CSPI01G15760 vs. Swiss-Prot
Match: KITHA_ARATH (Thymidine kinase a OS=Arabidopsis thaliana GN=TK1A PE=1 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 1.1e-80 Identity = 135/194 (69.59%), Postives = 170/194 (87.63%), Query Frame = 1
BLAST of CSPI01G15760 vs. Swiss-Prot
Match: KITH_SWPVK (Thymidine kinase OS=Swinepox virus (strain Kasza) GN=TK PE=3 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 6.9e-38 Identity = 81/180 (45.00%), Postives = 115/180 (63.89%), Query Frame = 1
BLAST of CSPI01G15760 vs. Swiss-Prot
Match: KITH_MOUSE (Thymidine kinase, cytosolic OS=Mus musculus GN=Tk1 PE=1 SV=3) HSP 1 Score: 149.1 bits (375), Expect = 9.4e-35 Identity = 89/185 (48.11%), Postives = 114/185 (61.62%), Query Frame = 1
BLAST of CSPI01G15760 vs. TrEMBL
Match: A0A0A0LYL4_CUCSA (Thymidine kinase OS=Cucumis sativus GN=Csa_1G181480 PE=3 SV=1) HSP 1 Score: 698.0 bits (1800), Expect = 6.0e-198 Identity = 349/353 (98.87%), Postives = 351/353 (99.43%), Query Frame = 1
BLAST of CSPI01G15760 vs. TrEMBL
Match: A0A0D2UIS2_GOSRA (Thymidine kinase OS=Gossypium raimondii GN=B456_010G249600 PE=3 SV=1) HSP 1 Score: 361.7 bits (927), Expect = 1.0e-96 Identity = 190/281 (67.62%), Postives = 220/281 (78.29%), Query Frame = 1
BLAST of CSPI01G15760 vs. TrEMBL
Match: A0A067LDR5_JATCU (Thymidine kinase OS=Jatropha curcas GN=JCGZ_02929 PE=3 SV=1) HSP 1 Score: 359.8 bits (922), Expect = 3.9e-96 Identity = 190/266 (71.43%), Postives = 214/266 (80.45%), Query Frame = 1
BLAST of CSPI01G15760 vs. TrEMBL
Match: I3SNW4_LOTJA (Thymidine kinase OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 6.7e-96 Identity = 189/276 (68.48%), Postives = 218/276 (78.99%), Query Frame = 1
BLAST of CSPI01G15760 vs. TrEMBL
Match: A0A0B0NWB9_GOSAR (Thymidine kinase OS=Gossypium arboreum GN=F383_05181 PE=3 SV=1) HSP 1 Score: 358.6 bits (919), Expect = 8.7e-96 Identity = 187/282 (66.31%), Postives = 221/282 (78.37%), Query Frame = 1
BLAST of CSPI01G15760 vs. TAIR10
Match: AT5G23070.1 (AT5G23070.1 Thymidine kinase) HSP 1 Score: 304.3 bits (778), Expect = 9.8e-83 Identity = 162/279 (58.06%), Postives = 207/279 (74.19%), Query Frame = 1
BLAST of CSPI01G15760 vs. TAIR10
Match: AT3G07800.1 (AT3G07800.1 Thymidine kinase) HSP 1 Score: 301.6 bits (771), Expect = 6.4e-82 Identity = 135/194 (69.59%), Postives = 170/194 (87.63%), Query Frame = 1
BLAST of CSPI01G15760 vs. NCBI nr
Match: gi|700209940|gb|KGN65036.1| (Thymidine kinase [Cucumis sativus]) HSP 1 Score: 698.0 bits (1800), Expect = 8.7e-198 Identity = 349/353 (98.87%), Postives = 351/353 (99.43%), Query Frame = 1
BLAST of CSPI01G15760 vs. NCBI nr
Match: gi|778659746|ref|XP_011654956.1| (PREDICTED: thymidine kinase [Cucumis sativus]) HSP 1 Score: 563.1 bits (1450), Expect = 3.3e-157 Identity = 279/281 (99.29%), Postives = 279/281 (99.29%), Query Frame = 1
BLAST of CSPI01G15760 vs. NCBI nr
Match: gi|659127259|ref|XP_008463610.1| (PREDICTED: thymidine kinase-like [Cucumis melo]) HSP 1 Score: 545.0 bits (1403), Expect = 9.4e-152 Identity = 270/281 (96.09%), Postives = 273/281 (97.15%), Query Frame = 1
BLAST of CSPI01G15760 vs. NCBI nr
Match: gi|743893916|ref|XP_011040200.1| (PREDICTED: thymidine kinase-like [Populus euphratica]) HSP 1 Score: 367.5 bits (942), Expect = 2.7e-98 Identity = 198/282 (70.21%), Postives = 226/282 (80.14%), Query Frame = 1
BLAST of CSPI01G15760 vs. NCBI nr
Match: gi|359497110|ref|XP_002266298.2| (PREDICTED: thymidine kinase-like isoform X2 [Vitis vinifera]) HSP 1 Score: 365.5 bits (937), Expect = 1.0e-97 Identity = 195/277 (70.40%), Postives = 222/277 (80.14%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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