Carg25612 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25612
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Thymidine kinase
Location	Cucurbita_argyrosperma_scaffold_223 : 191063 .. 193830 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCCGCTCTCCAAATCAAAATTTACAGACCTTTCTCAATCCTTTGCCAAAACCCCATCAAAACCCTCCTCAATACGCTTATGCTACCCATTTCTAAGATGAAATCCTTCGTATCATCATCATCTTTCTCAACCCTCTCGCCCTATTTCCCCATTACCGCTTCTCCAACCCTCTCTTTGGCTTCTAAATCGACGCAATGCAACCCTATATTCACCCACTTGTCCAATTTTTTCTCTCTGAAAACGCCCACAGTTTCGTTGCCCAGAAACCAGGGCTTTTCAACCCACAAACGAAGTGCCCAAATCGTAGCTTCTTTGTCACCGCCCTCCGGCGAGGTTCATGTGATAGTAGGGCCGATGTTTGCTGGGAAAACAACCTCTCTTCTTCGGCGGATTCAGTCCGAGAGCATCAATGGCAGGTATTTTATGCTCTGATTTTGTGCTTCTATTCATTAATCTAATCGGTTGCGAGTGTTTATTGTAATGTTTTCTCTAGTCTCGTTTGGACTTGTCTCCCTTGTATTTCTAAGTTTCTACGGTTAACGGAAATGGGGCTTATTGGTATGATAGTAGGTGGTAAGTTTGCTAATAGATTGGGAGAATTTGTATTGGCTTGAATAATAGCATGAGGGTATTCCAATAAGAAATGAGAAGAAAATGATTCTAAGGGTTTTGTTAAGAATGATGGTGTGATACACGTTAGGAATGAGAAACAAAAATGGGATTGAAAGTCCTCTGTCTGTTATGTCCTCTGTCACTTTCTTCCGTTCTTCCTCTTCTCCTGCTCCGATACCATGTTAAGAATGAATCTATGTTTCTCATTCTTAACCATTTTGAACGGTTCTAATGTGATTATTCTTGTCTATGTGTACAAATTCTCAATATTAGAGTTATGCATATTGGTGATAAACGAGGGGTTAGGCTGAAATATGATGTGGGTTTTGGCCTCTTGATAAAGAATTTCCCCTTTAATACAGCTCTCAACACTCTAGAAGGCAGCCCTTTTAACATTAGACCATATGACCTTGACTCTTTCTTTGAAACAAGGCTATTGATACATAGACATTGTTGCACCAAGTTCTAAGGTCTAACAGTTTCCATTTGAACTGTAAAATAAAGAAACATTCAAAAAGTAGGCGACTTGCATTTTCACCAAGCCTTTTGGCTTTTGCAAGTGTATGCACCAGTTCAGTTGGATTGTACAATTTGGCGTTAGATCTTATAATTTGGAGATGATACAAGAGTTCACTGGTGATCACCTACTTGGGATTTGATAACTTGGATTGAATTTGTGCTATGATATATCTTGATTGGTGTAGAAGCTTCTTTTTGGGGTAAAATTCATAAAACTTATTATTTTTTACAGAAGTGTAGCCATTATTAAGTCGAATAAAGACACGAGATATGGACTGGATTCGATTGTGACGCACGATGGCATGAAACTGCCTTGCTGGGCATTACCAAACTTATCATCTTTCAAACAAAAGTTTGGTGAAGGTGCTTATGACAAGGTATGATAATCCTACCTTCTTAAGGAAAGCTTGATATCTCTCTATGAGGCTAAAGATTTGGTTTGCAGTTAGAATGAGCAGATAGCTGACTAATTGGGCATACTGATTTTCCTGTAAACTAAATTTTTAGTTCGGTTTTGATAATGGTATGATAGCTAGATGTGATTGGAATTGATGAAGCTCAATTCTTCGATGATCTTTACGATTTCTGTCGTGAAGCTGCTGATATGGATGGCAAAACAGTAATAGTTGCTGGGTTGGATGGGGATTACTTGAGGTATCATCAAAGTTTTTGGCATTCGAAATATTTGAATTATTTTCTTCGAAACTGATGGCCTTTCATTTGGCACACATTCAACGAAAGCTTTCATATTGATTTAAACTGAATACGCATTAGTAACTGAGCTAAAGCTTTTTTTGTGTTGGGGTTTATCTGAAAAAACATGAACAGGAGGAGCTTTGGTTCAGTTCTTGATATAATTCCGCTTGCCGATTCTGTAACAAAGTTAACTGCTCGATGCGAGATCTGCGGGAATCGAGCTTTCTTTACTTTAAGGAAGACAGAAGAAAAAGAGACGGAGCTGATTGGTGGTGCTGACATGTATATGCCCGTATGTCGACAACATTATGTTAGCGGGCAAGTAGTGATAGAGACAGCAAGAACTGTAGTAGAAGAAGCAAACAAGGTTGAGTTTACGACCACAGCATAGTTGTTCCTAGTAGTAGGACTGCAGAATCACATATAGCCCAGCAGCCTATGACGAAACATAGCAGTTGTTCGGTTGTCCCGACGATTAGGGTAAACAAGGAACGGGCGATTTTGGGAACGGATGGAATTACGGTAAGCATTTAGTCAGAGAATTGAAGAGAAGAGTGTAGCAGCAGGGGGAGGGAGGGCGTTGTGCTGTAGGTTTAGAAAATGGGATTGTTTTCATGGATTGGATGATAGGGAAAAAGGAGTGAATGGTATTGTCATATGTATCTGTGTTAGTTGAAAACTCAATTCATTATTGAGGGAGGAGGAGGAGACATTCATGTGTGTATTATTGGGTAAGTTGTTGATCACCCACCTGTTTCTTGTATTCTGCCAGTTTCCATTCCAATATATCAACTACTTTTCATAATTAGATAATGAAAAAGTTGTTTGGGTCTCACCTATATATGTTGAAAAGTTAAACAAAACTTGTATTTTCTTCTAATTTATTGAAGTGCACAATATCTGCTACCGGTAGGCTTTGTCGATATAGTAGAAAGATAT

mRNA sequence

TCTCCGCTCTCCAAATCAAAATTTACAGACCTTTCTCAATCCTTTGCCAAAACCCCATCAAAACCCTCCTCAATACGCTTATGCTACCCATTTCTAAGATGAAATCCTTCGTATCATCATCATCTTTCTCAACCCTCTCGCCCTATTTCCCCATTACCGCTTCTCCAACCCTCTCTTTGGCTTCTAAATCGACGCAATGCAACCCTATATTCACCCACTTGTCCAATTTTTTCTCTCTGAAAACGCCCACAGTTTCGTTGCCCAGAAACCAGGGCTTTTCAACCCACAAACGAAGTGCCCAAATCGTAGCTTCTTTGTCACCGCCCTCCGGCGAGGTTCATGTGATAGTAGGGCCGATGTTTGCTGGGAAAACAACCTCTCTTCTTCGGCGGATTCAGTCCGAGAGCATCAATGGCAGAAGTGTAGCCATTATTAAGTCGAATAAAGACACGAGATATGGACTGGATTCGATTGTGACGCACGATGGCATGAAACTGCCTTGCTGGGCATTACCAAACTTATCATCTTTCAAACAAAAGTTTGGTGAAGGTGCTTATGACAAGCTAGATGTGATTGGAATTGATGAAGCTCAATTCTTCGATGATCTTTACGATTTCTGTCGTGAAGCTGCTGATATGGATGGCAAAACAGTAATAGTTGCTGGGTTGGATGGGGATTACTTGAGGAGGAGCTTTGGTTCAGTTCTTGATATAATTCCGCTTGCCGATTCTGTAACAAAGTTAACTGCTCGATGCGAGATCTGCGGGAATCGAGCTTTCTTTACTTTAAGGAAGACAGAAGAAAAAGAGACGGAGCTGATTGGTGGTGCTGACATGTATATGCCCGTATGTCGACAACATTATGTTAGCGGGCAAGTAGTGATAGAGACAGCAAGAACTGTAGTAGAAGAAGCAAACAAGGTTGAGTTTACGACCACAGCATAGTTGTTCCTAGTAGTAGGACTGCAGAATCACATATAGCCCAGCAGCCTATGACGAAACATAGCAGTTGTTCGGTTGTCCCGACGATTAGGGTAAACAAGGAACGGGCGATTTTGGGAACGGATGGAATTACGGTAAGCATTTAGTCAGAGAATTGAAGAGAAGAGTGTAGCAGCAGGGGGAGGGAGGGCGTTGTGCTGTAGGTTTAGAAAATGGGATTGTTTTCATGGATTGGATGATAGGGAAAAAGGAGTGAATGGTATTGTCATATGTATCTGTGTTAGTTGAAAACTCAATTCATTATTGAGGGAGGAGGAGGAGACATTCATGTGTGTATTATTGGGTAAGTTGTTGATCACCCACCTGTTTCTTGTATTCTGCCAGTTTCCATTCCAATATATCAACTACTTTTCATAATTAGATAATGAAAAAGTTGTTTGGGTCTCACCTATATATGTTGAAAAGTTAAACAAAACTTGTATTTTCTTCTAATTTATTGAAGTGCACAATATCTGCTACCGGTAGGCTTTGTCGATATAGTAGAAAGATAT

Coding sequence (CDS)

ATGCTACCCATTTCTAAGATGAAATCCTTCGTATCATCATCATCTTTCTCAACCCTCTCGCCCTATTTCCCCATTACCGCTTCTCCAACCCTCTCTTTGGCTTCTAAATCGACGCAATGCAACCCTATATTCACCCACTTGTCCAATTTTTTCTCTCTGAAAACGCCCACAGTTTCGTTGCCCAGAAACCAGGGCTTTTCAACCCACAAACGAAGTGCCCAAATCGTAGCTTCTTTGTCACCGCCCTCCGGCGAGGTTCATGTGATAGTAGGGCCGATGTTTGCTGGGAAAACAACCTCTCTTCTTCGGCGGATTCAGTCCGAGAGCATCAATGGCAGAAGTGTAGCCATTATTAAGTCGAATAAAGACACGAGATATGGACTGGATTCGATTGTGACGCACGATGGCATGAAACTGCCTTGCTGGGCATTACCAAACTTATCATCTTTCAAACAAAAGTTTGGTGAAGGTGCTTATGACAAGCTAGATGTGATTGGAATTGATGAAGCTCAATTCTTCGATGATCTTTACGATTTCTGTCGTGAAGCTGCTGATATGGATGGCAAAACAGTAATAGTTGCTGGGTTGGATGGGGATTACTTGAGGAGGAGCTTTGGTTCAGTTCTTGATATAATTCCGCTTGCCGATTCTGTAACAAAGTTAACTGCTCGATGCGAGATCTGCGGGAATCGAGCTTTCTTTACTTTAAGGAAGACAGAAGAAAAAGAGACGGAGCTGATTGGTGGTGCTGACATGTATATGCCCGTATGTCGACAACATTATGTTAGCGGGCAAGTAGTGATAGAGACAGCAAGAACTGTAGTAGAAGAAGCAAACAAGGTTGAGTTTACGACCACAGCATAG

Protein sequence

MLPISKMKSFVSSSSFSTLSPYFPITASPTLSLASKSTQCNPIFTHLSNFFSLKTPTVSLPRNQGFSTHKRSAQIVASLSPPSGEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKSNKDTRYGLDSIVTHDGMKLPCWALPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFCREAADMDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTEEKETELIGGADMYMPVCRQHYVSGQVVIETARTVVEEANKVEFTTTA

Homology

[Close]

BLAST of Carg25612 vs. NCBI nr
Match: XP_022925302.1 (thymidine kinase a-like [Cucurbita moschata])

HSP 1 Score: 553.9 bits (1426), Expect = 3.2e-154
Identity = 281/287 (97.91%), Postives = 283/287 (98.61%), Query Frame = 0


Query: 1   MLPISKMKSFVSSSSFSTLSPYFPITASPTLSLASKSTQCNPIFTHLSNFFSLKTPTVSL 60
           MLPISKMKSFVSSSSFSTLSPYFPITASPTLSLASKSTQCNPIFTHLSNFFSLKT  VSL
Sbjct: 1   MLPISKMKSFVSSSSFSTLSPYFPITASPTLSLASKSTQCNPIFTHLSNFFSLKTLRVSL 60

Query: 61  PRNQGFSTHKRSAQIVASLSPPSGEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKS 120
           PRNQGFS  KRSAQIVASLSPPSGEVHVIVGPMFAGKTTSLLRRIQSESINGRSVA+IKS
Sbjct: 61  PRNQGFSNQKRSAQIVASLSPPSGEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAVIKS 120

Query: 121 NKDTRYGLDSIVTHDGMKLPCWALPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFC 180
           NKDTRYGLDSIVTHDGMKLPCWALPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFC
Sbjct: 121 NKDTRYGLDSIVTHDGMKLPCWALPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFC 180

Query: 181 REAADMDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTE 240
           REAADMDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTE
Sbjct: 181 REAADMDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTE 240

Query: 241 EKETELIGGADMYMPVCRQHYVSGQVVIETARTVVEEANKVEFTTTA 288
           EKETELIGGADMYMPVCRQHYVSGQVVIETARTVVEEA+KVEFTTTA
Sbjct: 241 EKETELIGGADMYMPVCRQHYVSGQVVIETARTVVEEAHKVEFTTTA 287

[Close]

BLAST of Carg25612 vs. NCBI nr
Match: XP_022966756.1 (thymidine kinase a-like [Cucurbita maxima])

HSP 1 Score: 550.4 bits (1417), Expect = 3.5e-153
Identity = 278/287 (96.86%), Postives = 283/287 (98.61%), Query Frame = 0


Query: 1   MLPISKMKSFVSSSSFSTLSPYFPITASPTLSLASKSTQCNPIFTHLSNFFSLKTPTVSL 60
           MLPISKMKSFVSSSSFSTLSPYFPITASPTLSLA KSTQCNPIFTHLSNFFSLKTP VSL
Sbjct: 1   MLPISKMKSFVSSSSFSTLSPYFPITASPTLSLAYKSTQCNPIFTHLSNFFSLKTPRVSL 60

Query: 61  PRNQGFSTHKRSAQIVASLSPPSGEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKS 120
           PRN+GFST KR+AQ+ ASLSPPSGEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKS
Sbjct: 61  PRNEGFSTQKRTAQMGASLSPPSGEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKS 120

Query: 121 NKDTRYGLDSIVTHDGMKLPCWALPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFC 180
           NKDTRYGLDSIVTHDGMKLPCWA+PNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFC
Sbjct: 121 NKDTRYGLDSIVTHDGMKLPCWAVPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFC 180

Query: 181 REAADMDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTE 240
           REAADMDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTE
Sbjct: 181 REAADMDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTE 240

Query: 241 EKETELIGGADMYMPVCRQHYVSGQVVIETARTVVEEANKVEFTTTA 288
           EKETELIGGADMYMPVCRQHYVSGQVVIETARTVVEEA+KVEFTTTA
Sbjct: 241 EKETELIGGADMYMPVCRQHYVSGQVVIETARTVVEEAHKVEFTTTA 287

[Close]

BLAST of Carg25612 vs. NCBI nr
Match: XP_023541605.1 (thymidine kinase a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 535.4 bits (1378), Expect = 1.2e-148
Identity = 275/287 (95.82%), Postives = 278/287 (96.86%), Query Frame = 0


Query: 1   MLPISKMKSFVSSSSFSTLSPYFPITASPTLSLASKSTQCNPIFTHLSNFFSLKTPTVSL 60
           MLPISKMKSFVSSSSFSTLSPYFPITASPTLSLASKSTQCNPIFT LSNFFSLKT     
Sbjct: 1   MLPISKMKSFVSSSSFSTLSPYFPITASPTLSLASKSTQCNPIFTQLSNFFSLKT----- 60

Query: 61  PRNQGFSTHKRSAQIVASLSPPSGEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKS 120
           PRNQGFST KRSA++VASLS PSGEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKS
Sbjct: 61  PRNQGFSTQKRSARMVASLSLPSGEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKS 120

Query: 121 NKDTRYGLDSIVTHDGMKLPCWALPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFC 180
           NKDTRYGLDSIVTHDGMKLPCWALPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFC
Sbjct: 121 NKDTRYGLDSIVTHDGMKLPCWALPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFC 180

Query: 181 REAADMDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTE 240
           REAADMDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTE
Sbjct: 181 REAADMDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTE 240

Query: 241 EKETELIGGADMYMPVCRQHYVSGQVVIETARTVVEEANKVEFTTTA 288
           EKETELIGGAD YMPVCRQHYVSGQVVIETARTVVEEA+KVEFTTTA
Sbjct: 241 EKETELIGGADTYMPVCRQHYVSGQVVIETARTVVEEAHKVEFTTTA 282

[Close]

BLAST of Carg25612 vs. NCBI nr
Match: KGN65036.1 (Thymidine kinase [Cucumis sativus])

HSP 1 Score: 473.4 bits (1217), Expect = 5.5e-130
Identity = 240/285 (84.21%), Postives = 259/285 (90.88%), Query Frame = 0


Query: 4   ISKMKSFVSSSSFSTLSPYFPITASPT-LSLASKSTQCNPIFTHLSNFFSLKTPTVSLPR 63
           IS MKSFV SSSFS LSPYFPI+ASP+  SL SKS QC P+FT LSNFF+ KTPT+SLP 
Sbjct: 70  ISNMKSFVFSSSFSILSPYFPISASPSFFSLPSKSAQCGPMFTQLSNFFTFKTPTISLPS 129

Query: 64  NQGFSTHKRSAQIVASLSPPSGEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKSNK 123
              FST  R+ Q+ ASLSPPSGE+HVI+GPMFAGKTT+LLRRIQSES NGRSVAIIKSNK
Sbjct: 130 KGFFSTQNRNPQMRASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGRSVAIIKSNK 189

Query: 124 DTRYGLDSIVTHDGMKLPCWALPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFCRE 183
           DTRYGLDSIVTHDGMKLPCWA+PNLSSFK+KFG+G+YDKLDVIGIDEAQFFDDLYDFC E
Sbjct: 190 DTRYGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCCE 249

Query: 184 AADMDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTEEK 243
           AAD+DGKTVIVAGLDGDYLRR+FGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKT+EK
Sbjct: 250 AADIDGKTVIVAGLDGDYLRRNFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTQEK 309

Query: 244 ETELIGGADMYMPVCRQHYVSGQVVIETARTVVEEANKVEFTTTA 288
           ETELIGGADMYMPVCRQHYVSGQV IETARTVV E+ KV + T A
Sbjct: 310 ETELIGGADMYMPVCRQHYVSGQVAIETARTVV-ESRKVGYRTPA 353

[Close]

BLAST of Carg25612 vs. NCBI nr
Match: XP_011654956.1 (PREDICTED: thymidine kinase [Cucumis sativus])

HSP 1 Score: 470.3 bits (1209), Expect = 4.6e-129
Identity = 238/282 (84.40%), Postives = 257/282 (91.13%), Query Frame = 0


Query: 7   MKSFVSSSSFSTLSPYFPITASPT-LSLASKSTQCNPIFTHLSNFFSLKTPTVSLPRNQG 66
           MKSFV SSSFS LSPYFPI+ASP+  SL SKS QC P+FT LSNFF+ KTPT+SLP    
Sbjct: 1   MKSFVFSSSFSILSPYFPISASPSFFSLPSKSAQCGPMFTQLSNFFTFKTPTISLPSKGF 60

Query: 67  FSTHKRSAQIVASLSPPSGEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKSNKDTR 126
           FST  R+ Q+ ASLSPPSGE+HVI+GPMFAGKTT+LLRRIQSES NGRSVAIIKSNKDTR
Sbjct: 61  FSTQNRNPQMRASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGRSVAIIKSNKDTR 120

Query: 127 YGLDSIVTHDGMKLPCWALPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFCREAAD 186
           YGLDSIVTHDGMKLPCWA+PNLSSFK+KFG+G+YDKLDVIGIDEAQFFDDLYDFC EAAD
Sbjct: 121 YGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCCEAAD 180

Query: 187 MDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTEEKETE 246
           +DGKTVIVAGLDGDYLRR+FGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKT+EKETE
Sbjct: 181 IDGKTVIVAGLDGDYLRRNFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTQEKETE 240

Query: 247 LIGGADMYMPVCRQHYVSGQVVIETARTVVEEANKVEFTTTA 288
           LIGGADMYMPVCRQHYVSGQV IETARTVV E+ KV + T A
Sbjct: 241 LIGGADMYMPVCRQHYVSGQVAIETARTVV-ESRKVGYRTPA 281

[Close]

BLAST of Carg25612 vs. TAIR10
Match: AT5G23070.1 (Thymidine kinase)

HSP 1 Score: 313.9 bits (803), Expect = 1.0e-85
Identity = 150/213 (70.42%), Postives = 183/213 (85.92%), Query Frame = 0


Query: 68  THKRSAQIVASLSPPSGEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKSNKDTRYG 127
           T   S+Q ++S SP  GE+HV+VGPMF+GKTT+LLRRI +E   G+ +AIIKSNKDTRY 
Sbjct: 63  TSSSSSQPLSSSSP--GEIHVVVGPMFSGKTTTLLRRILAERETGKRIAIIKSNKDTRYC 122

Query: 128 LDSIVTHDGMKLPCWALPNLSSFKQKFGEGAYD-KLDVIGIDEAQFFDDLYDFCREAADM 187
            +SIVTHDG K PCW+LP+LSSFK++FG   Y+ +LDVIGIDEAQFF DLY+FCREAAD 
Sbjct: 123 TESIVTHDGEKYPCWSLPDLSSFKERFGFDDYENRLDVIGIDEAQFFGDLYEFCREAADK 182

Query: 188 DGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTEEKETEL 247
           +GKTVIVAGLDGD++RR FGSVLD+IP+AD+VTKLT+RCE+CG RA FT+RKTEEKETEL
Sbjct: 183 EGKTVIVAGLDGDFMRRRFGSVLDLIPIADTVTKLTSRCEVCGKRALFTMRKTEEKETEL 242

Query: 248 IGGADMYMPVCRQHYVSGQVVIETARTVVEEAN 280
           IGGA++YMPVCR HYV GQ V+ETAR V++ +N
Sbjct: 243 IGGAEVYMPVCRSHYVCGQNVLETARAVLDSSN 273

[Close]

BLAST of Carg25612 vs. TAIR10
Match: AT3G07800.1 (Thymidine kinase)

HSP 1 Score: 303.5 bits (776), Expect = 1.4e-82
Identity = 141/198 (71.21%), Postives = 174/198 (87.88%), Query Frame = 0


Query: 83  SGEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKSNKDTRYGLDSIVTHDGMKLPCW 142
           SG VHVI+GPMF+GK+TSLLRRI+SE  +GRSVA++KS+KDTRY  DS+VTHDG+  PCW
Sbjct: 30  SGAVHVIMGPMFSGKSTSLLRRIKSEISDGRSVAMLKSSKDTRYAKDSVVTHDGIGFPCW 89

Query: 143 ALPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFCREAADMDGKTVIVAGLDGDYLR 202
           ALP+L SF +KFG  AY+KLDVIGIDEAQFF DLY+FC + AD DGK VIVAGLDGDYLR
Sbjct: 90  ALPDLMSFPEKFGLDAYNKLDVIGIDEAQFFGDLYEFCCKVADDDGKIVIVAGLDGDYLR 149

Query: 203 RSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTEEKETELIGGADMYMPVCRQHYV 262
           RSFG+VLDIIP+ADSVTKLTARCE+CG++AFFTLRK  +  TELIGGAD+YMPVCR+HY+
Sbjct: 150 RSFGAVLDIIPIADSVTKLTARCEVCGHKAFFTLRKNCDTRTELIGGADVYMPVCRKHYI 209

Query: 263 SGQVVIETARTVVEEANK 281
           +  +VI+ ++ V+E+++K
Sbjct: 210 TNHIVIKASKKVLEDSDK 227

[Close]

BLAST of Carg25612 vs. Swiss-Prot
Match: sp|O81263|KITH_ORYSJ (Thymidine kinase OS=Oryza sativa subsp. japonica OX=39947 GN=TK PE=2 SV=2)

HSP 1 Score: 315.5 bits (807), Expect = 6.2e-85
Identity = 152/200 (76.00%), Postives = 174/200 (87.00%), Query Frame = 0


Query: 84  GEVHVIVGPMFAGKTTSLLRRIQSESING-RSVAIIKSNKDTRYGLDSIVTHDGMKLPCW 143
           GE+HVIVGPMFAGKTT+LLRR+Q E+  G R+VA+IKS+KD RYGLDS+VTHDG K+PCW
Sbjct: 67  GEIHVIVGPMFAGKTTALLRRVQVEAGTGSRNVALIKSDKDNRYGLDSVVTHDGTKMPCW 126

Query: 144 ALPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFCREAADMDGKTVIVAGLDGDYLR 203
           ALP LSSF+ K G  AYDK+DVIGIDEAQFFDDL+DFC +AAD DGK V+VAGLDGDY R
Sbjct: 127 ALPELSSFQDKLGTEAYDKVDVIGIDEAQFFDDLHDFCCKAADRDGKIVVVAGLDGDYKR 186

Query: 204 RSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTEEKETELIGGADMYMPVCRQHYV 263
             FGSVLDIIPLADSVTKLTARCE+CG RAFFTLRKT E +TELIGGAD+YMPVCRQHY+
Sbjct: 187 NKFGSVLDIIPLADSVTKLTARCELCGRRAFFTLRKTRETKTELIGGADVYMPVCRQHYL 246

Query: 264 SGQVVIETARTVVE-EANKV 282
            GQ+VIE  R V++ E +KV
Sbjct: 247 DGQIVIEATRIVLDLEKSKV 266

[Close]

BLAST of Carg25612 vs. Swiss-Prot
Match: sp|F4KBF5|KITHB_ARATH (Thymidine kinase b OS=Arabidopsis thaliana OX=3702 GN=TK1B PE=1 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 1.8e-84
Identity = 150/213 (70.42%), Postives = 183/213 (85.92%), Query Frame = 0


Query: 68  THKRSAQIVASLSPPSGEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKSNKDTRYG 127
           T   S+Q ++S SP  GE+HV+VGPMF+GKTT+LLRRI +E   G+ +AIIKSNKDTRY 
Sbjct: 63  TSSSSSQPLSSSSP--GEIHVVVGPMFSGKTTTLLRRILAERETGKRIAIIKSNKDTRYC 122

Query: 128 LDSIVTHDGMKLPCWALPNLSSFKQKFGEGAYD-KLDVIGIDEAQFFDDLYDFCREAADM 187
            +SIVTHDG K PCW+LP+LSSFK++FG   Y+ +LDVIGIDEAQFF DLY+FCREAAD 
Sbjct: 123 TESIVTHDGEKYPCWSLPDLSSFKERFGFDDYENRLDVIGIDEAQFFGDLYEFCREAADK 182

Query: 188 DGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTEEKETEL 247
           +GKTVIVAGLDGD++RR FGSVLD+IP+AD+VTKLT+RCE+CG RA FT+RKTEEKETEL
Sbjct: 183 EGKTVIVAGLDGDFMRRRFGSVLDLIPIADTVTKLTSRCEVCGKRALFTMRKTEEKETEL 242

Query: 248 IGGADMYMPVCRQHYVSGQVVIETARTVVEEAN 280
           IGGA++YMPVCR HYV GQ V+ETAR V++ +N
Sbjct: 243 IGGAEVYMPVCRSHYVCGQNVLETARAVLDSSN 273

[Close]

BLAST of Carg25612 vs. Swiss-Prot
Match: sp|Q9S750|KITHA_ARATH (Thymidine kinase a OS=Arabidopsis thaliana OX=3702 GN=TK1A PE=1 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 2.5e-81
Identity = 141/198 (71.21%), Postives = 174/198 (87.88%), Query Frame = 0


Query: 83  SGEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKSNKDTRYGLDSIVTHDGMKLPCW 142
           SG VHVI+GPMF+GK+TSLLRRI+SE  +GRSVA++KS+KDTRY  DS+VTHDG+  PCW
Sbjct: 30  SGAVHVIMGPMFSGKSTSLLRRIKSEISDGRSVAMLKSSKDTRYAKDSVVTHDGIGFPCW 89

Query: 143 ALPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFCREAADMDGKTVIVAGLDGDYLR 202
           ALP+L SF +KFG  AY+KLDVIGIDEAQFF DLY+FC + AD DGK VIVAGLDGDYLR
Sbjct: 90  ALPDLMSFPEKFGLDAYNKLDVIGIDEAQFFGDLYEFCCKVADDDGKIVIVAGLDGDYLR 149

Query: 203 RSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTEEKETELIGGADMYMPVCRQHYV 262
           RSFG+VLDIIP+ADSVTKLTARCE+CG++AFFTLRK  +  TELIGGAD+YMPVCR+HY+
Sbjct: 150 RSFGAVLDIIPIADSVTKLTARCEVCGHKAFFTLRKNCDTRTELIGGADVYMPVCRKHYI 209

Query: 263 SGQVVIETARTVVEEANK 281
           +  +VI+ ++ V+E+++K
Sbjct: 210 TNHIVIKASKKVLEDSDK 227

[Close]

BLAST of Carg25612 vs. Swiss-Prot
Match: sp|P23335|KITH_SWPVK (Thymidine kinase OS=Swinepox virus (strain Kasza) OX=10277 GN=TK PE=3 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 8.8e-39
Identity = 80/180 (44.44%), Postives = 116/180 (64.44%), Query Frame = 0


Query: 84  GEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKSNKDTRYGLDSIVTHDGMKLPCWA 143
           G +H+I+GPMF+GK+T L+R +    I   +  +IK +KD RYG D++ THD   +   +
Sbjct: 4   GFIHLILGPMFSGKSTELIRLVNRYQIATYNCRVIKYSKDNRYGNDAVYTHDKCYISAVS 63

Query: 144 LPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFCREAADMDGKTVIVAGLDGDYLRR 203
             +L   K        D +D++GIDE QFF+D+ +FC   A+  GK VIVA LDG Y R+
Sbjct: 64  TDSLFDIKD-----TLDDVDIVGIDEGQFFNDIVEFCEYIAN-KGKIVIVAALDGTYERK 123

Query: 204 SFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTEEKETELIGGADMYMPVCRQHYVS 263
            FG++L++IPL++ VTKL A C IC   A F+ R ++EKE ELIGG + Y+ VCR  Y++
Sbjct: 124 PFGNILNLIPLSEKVTKLNAICMICHRDASFSKRLSDEKEIELIGGKEKYLSVCRSCYLT 177

[Close]

BLAST of Carg25612 vs. Swiss-Prot
Match: sp|P04184|KITH_MOUSE (Thymidine kinase, cytosolic OS=Mus musculus OX=10090 GN=Tk1 PE=1 SV=3)

HSP 1 Score: 151.8 bits (382), Expect = 1.2e-35
Identity = 88/188 (46.81%), Postives = 118/188 (62.77%), Query Frame = 0


Query: 77  ASLSPPSGEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKSNKDTRYGLDSIVTHDG 136
           +S S   G++ VI+GPMF+GK+T L+RR++   I      +IK  KDTRY  +S  THD 
Sbjct: 12  SSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYS-NSFSTHDR 71

Query: 137 M---KLPCWALPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFCREAADMDGKTVIV 196
                LP   L +++  ++  G      + VIGIDE QFF D+ DFC   A+ +GKTVIV
Sbjct: 72  NTMDALPACMLRDVT--QESLG------VAVIGIDEGQFFPDIVDFCEMMAN-EGKTVIV 131

Query: 197 AGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTEEKETELIGGADMY 256
           A LDG + R++FGS+L+++PLA+SV KLTA C  C   A +T R   EKE E+IGGAD Y
Sbjct: 132 AALDGTFQRKAFGSILNLVPLAESVVKLTAVCMECFREAAYTKRLGLEKEVEVIGGADKY 189

Query: 257 MPVCRQHY 262
             VCR  Y
Sbjct: 192 HSVCRLCY 189

[Close]

BLAST of Carg25612 vs. TrEMBL
Match: tr|A0A0A0LYL4|A0A0A0LYL4_CUCSA (Thymidine kinase OS=Cucumis sativus OX=3659 GN=Csa_1G181480 PE=3 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 3.6e-130
Identity = 240/285 (84.21%), Postives = 259/285 (90.88%), Query Frame = 0


Query: 4   ISKMKSFVSSSSFSTLSPYFPITASPT-LSLASKSTQCNPIFTHLSNFFSLKTPTVSLPR 63
           IS MKSFV SSSFS LSPYFPI+ASP+  SL SKS QC P+FT LSNFF+ KTPT+SLP 
Sbjct: 70  ISNMKSFVFSSSFSILSPYFPISASPSFFSLPSKSAQCGPMFTQLSNFFTFKTPTISLPS 129

Query: 64  NQGFSTHKRSAQIVASLSPPSGEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKSNK 123
              FST  R+ Q+ ASLSPPSGE+HVI+GPMFAGKTT+LLRRIQSES NGRSVAIIKSNK
Sbjct: 130 KGFFSTQNRNPQMRASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGRSVAIIKSNK 189

Query: 124 DTRYGLDSIVTHDGMKLPCWALPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFCRE 183
           DTRYGLDSIVTHDGMKLPCWA+PNLSSFK+KFG+G+YDKLDVIGIDEAQFFDDLYDFC E
Sbjct: 190 DTRYGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCCE 249

Query: 184 AADMDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTEEK 243
           AAD+DGKTVIVAGLDGDYLRR+FGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKT+EK
Sbjct: 250 AADIDGKTVIVAGLDGDYLRRNFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTQEK 309

Query: 244 ETELIGGADMYMPVCRQHYVSGQVVIETARTVVEEANKVEFTTTA 288
           ETELIGGADMYMPVCRQHYVSGQV IETARTVV E+ KV + T A
Sbjct: 310 ETELIGGADMYMPVCRQHYVSGQVAIETARTVV-ESRKVGYRTPA 353

[Close]

BLAST of Carg25612 vs. TrEMBL
Match: tr|A0A1S4E495|A0A1S4E495_CUCME (Thymidine kinase OS=Cucumis melo OX=3656 GN=LOC103501719 PE=3 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 1.3e-127
Identity = 236/282 (83.69%), Postives = 255/282 (90.43%), Query Frame = 0


Query: 7   MKSFVSSSSFSTLSPYFPITASPT-LSLASKSTQCNPIFTHLSNFFSLKTPTVSLPRNQG 66
           MKS VSSSSFS LSPYFPI+ASP+  SL SKS QC P+FT +SNFF+ KTPT SLP    
Sbjct: 1   MKSLVSSSSFSILSPYFPISASPSFFSLPSKSAQCGPMFTQVSNFFTFKTPTTSLPSKGF 60

Query: 67  FSTHKRSAQIVASLSPPSGEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKSNKDTR 126
           FST  R+ Q  ASLSPPSGE+HVI+GPMFAGKTT+LLRRIQSES NGR+VAIIKSNKDTR
Sbjct: 61  FSTQNRNPQTRASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGRNVAIIKSNKDTR 120

Query: 127 YGLDSIVTHDGMKLPCWALPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFCREAAD 186
           YGLDSIVTHDGMKLPCWA+PNLSSFK+KFG+G+YDKLDVIGIDEAQFFDDLYDFC EAAD
Sbjct: 121 YGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCCEAAD 180

Query: 187 MDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTEEKETE 246
           +DGKTVIVAGLDGDYLRR+FGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKT+EKETE
Sbjct: 181 IDGKTVIVAGLDGDYLRRNFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTQEKETE 240

Query: 247 LIGGADMYMPVCRQHYVSGQVVIETARTVVEEANKVEFTTTA 288
           LIGGAD+YMPVCRQHYVSGQVVIE ARTVV E+ KVE  T A
Sbjct: 241 LIGGADVYMPVCRQHYVSGQVVIEAARTVV-ESRKVECRTPA 281

[Close]

BLAST of Carg25612 vs. TrEMBL
Match: tr|A0A2I4F9R8|A0A2I4F9R8_9ROSI (Thymidine kinase OS=Juglans regia OX=51240 GN=LOC108996815 PE=3 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 3.3e-99
Identity = 195/280 (69.64%), Postives = 217/280 (77.50%), Query Frame = 0


Query: 1   MLPISKMKSFVSSSSFSTLSPYFPITASPT----LSLASKSTQCNPIFTHLSNFFSLKTP 60
           M  +S MK F        L+P F     PT     S ASKS  CN       +F  LK+ 
Sbjct: 1   MFAVSVMKCF--------LTPTFSAIPKPTPLALFSFASKSHPCNSTTFRHPSFLPLKSA 60

Query: 61  TVSLPRNQGFSTHKRSAQIVASLSPPSGEVHVIVGPMFAGKTTSLLRRIQSESINGRSVA 120
             S P++   S   R   +  +    +GE+HVIVGPMF+GKTTSLLRRIQSES NGRSVA
Sbjct: 61  IFS-PKSAFLSIQNRGMHVEVAPPSSTGEIHVIVGPMFSGKTTSLLRRIQSESSNGRSVA 120

Query: 121 IIKSNKDTRYGLDSIVTHDGMKLPCWALPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDL 180
           +IKSNKDTRYGLD+IVTHDG+KLPCWAL +LSSF+QKFG  AYD+LDVIGIDEAQFF+DL
Sbjct: 121 LIKSNKDTRYGLDAIVTHDGVKLPCWALADLSSFRQKFGPDAYDQLDVIGIDEAQFFEDL 180

Query: 181 YDFCREAADMDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGNRAFFTL 240
           YDFCR AAD DGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCE+C  RAFFTL
Sbjct: 181 YDFCRVAADRDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCELCQKRAFFTL 240

Query: 241 RKTEEKETELIGGADMYMPVCRQHYVSGQVVIETARTVVE 277
           RKTEEK+TELIGGAD+YMPVCRQHYVSGQVVIE ARTV+E
Sbjct: 241 RKTEEKQTELIGGADVYMPVCRQHYVSGQVVIEAARTVLE 271

[Close]

BLAST of Carg25612 vs. TrEMBL
Match: tr|A0A067LDR5|A0A067LDR5_JATCU (Thymidine kinase OS=Jatropha curcas OX=180498 GN=JCGZ_02929 PE=3 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 1.5e-96
Identity = 190/261 (72.80%), Postives = 211/261 (80.84%), Query Frame = 0


Query: 24  PITASPTLSLASK-STQCNPIFTHLSNFFSLKTPTVSLPRNQGFSTHKRSAQIVASLSPP 83
           P +++   SLASK     +P      NF  +K P    P    F    R  Q  +S S  
Sbjct: 11  PTSSALFFSLASKYKFLSSPSTLKNVNFLPIKPP----PPVPIFPIQNRCLQSKSSPSSS 70

Query: 84  SGEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKSNKDTRYGLDSIVTHDGMKLPCW 143
           SGE+HVIVGPMFAGKTT+LLRRI+SES +GR+VAIIKSNKDTRYGLDSIVTHDG+KLPC 
Sbjct: 71  SGEIHVIVGPMFAGKTTTLLRRIESESRDGRNVAIIKSNKDTRYGLDSIVTHDGLKLPCV 130

Query: 144 ALPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFCREAADMDGKTVIVAGLDGDYLR 203
           ALPNLSSF+QKFG  AY++LDVIGIDEAQFF+DLYDFCREAAD DGKTVIVAGLDGDYLR
Sbjct: 131 ALPNLSSFRQKFGADAYEQLDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLR 190

Query: 204 RSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTEEKETELIGGADMYMPVCRQHYV 263
           +SFGSVLDIIPLADSVTKLTARCEICG+RAFFTLRKTEE   ELIGGAD+YMPVCRQHYV
Sbjct: 191 KSFGSVLDIIPLADSVTKLTARCEICGSRAFFTLRKTEETRVELIGGADVYMPVCRQHYV 250

Query: 264 SGQVVIETARTVVEEANKVEF 284
           SGQVVIE A  +V E+ KVEF
Sbjct: 251 SGQVVIEAAARIVVESQKVEF 267

[Close]

BLAST of Carg25612 vs. TrEMBL
Match: tr|A0A2P4IT83|A0A2P4IT83_QUESU (Thymidine kinase OS=Quercus suber OX=58331 GN=CFP56_31848 PE=3 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 4.5e-96
Identity = 196/275 (71.27%), Postives = 215/275 (78.18%), Query Frame = 0


Query: 7   MKSFVSSSSFSTLSPYFPITASPTLSLASKSTQCNPIFTHLSNFFSLKTPTVSLPRNQGF 66
           MKS + + + S  +   P T    L L SKS  CNP  T  +    LK PT   P     
Sbjct: 1   MKS-ILTPTLSAFTFQLPKTTHLAL-LTSKSFPCNPNPT--TTLLPLK-PTTLSPTCSIH 60

Query: 67  STHKRSAQIVASLSPPS--GEVHVIVGPMFAGKTTSLLRRIQSESINGRSVAIIKSNKDT 126
           S   R   +  +  PP   GE+HVIVGPMFAGKTT+LLRRIQSES NGRSVAIIKSNKDT
Sbjct: 61  SIQSRDVHMEPATLPPEFPGEIHVIVGPMFAGKTTTLLRRIQSESSNGRSVAIIKSNKDT 120

Query: 127 RYGLDSIVTHDGMKLPCWALPNLSSFKQKFGEGAYDKLDVIGIDEAQFFDDLYDFCREAA 186
           RYGLDSIVTHDG KLPC ALP+LSSF+QKFG  AYDKLDVIGIDEAQFF+DLYDFCREAA
Sbjct: 121 RYGLDSIVTHDGAKLPCLALPDLSSFRQKFGLDAYDKLDVIGIDEAQFFEDLYDFCREAA 180

Query: 187 DMDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTEEKET 246
           D DGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLT+RCE+CG RAFFTLRKTEE +T
Sbjct: 181 DNDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTSRCELCGKRAFFTLRKTEEAQT 240

Query: 247 ELIGGADMYMPVCRQHYVSGQVVIETARTVVEEAN 280
           ELIGGAD+YMPVCR+HYVSGQVV+E AR V+E  N
Sbjct: 241 ELIGGADVYMPVCRKHYVSGQVVMEAARIVLESQN 270

The following BLAST results are available for this feature:

BLAST of Carg25612 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925302.1	3.2e-154	97.91	thymidine kinase a-like [Cucurbita moschata]	[more]
XP_022966756.1	3.5e-153	96.86	thymidine kinase a-like [Cucurbita maxima]	[more]
XP_023541605.1	1.2e-148	95.82	thymidine kinase a-like [Cucurbita pepo subsp. pepo]	[more]
KGN65036.1	5.5e-130	84.21	Thymidine kinase [Cucumis sativus]	[more]
XP_011654956.1	4.6e-129	84.40	PREDICTED: thymidine kinase [Cucumis sativus]	[more]

BLAST of Carg25612 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G23070.1	1.0e-85	70.42	Thymidine kinase	[more]
AT3G07800.1	1.4e-82	71.21	Thymidine kinase	[more]

BLAST of Carg25612 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O81263\|KITH_ORYSJ	6.2e-85	76.00	Thymidine kinase OS=Oryza sativa subsp. japonica OX=39947 GN=TK PE=2 SV=2	[more]
sp\|F4KBF5\|KITHB_ARATH	1.8e-84	70.42	Thymidine kinase b OS=Arabidopsis thaliana OX=3702 GN=TK1B PE=1 SV=1	[more]
sp\|Q9S750\|KITHA_ARATH	2.5e-81	71.21	Thymidine kinase a OS=Arabidopsis thaliana OX=3702 GN=TK1A PE=1 SV=1	[more]
sp\|P23335\|KITH_SWPVK	8.8e-39	44.44	Thymidine kinase OS=Swinepox virus (strain Kasza) OX=10277 GN=TK PE=3 SV=1	[more]
sp\|P04184\|KITH_MOUSE	1.2e-35	46.81	Thymidine kinase, cytosolic OS=Mus musculus OX=10090 GN=Tk1 PE=1 SV=3	[more]

BLAST of Carg25612 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LYL4\|A0A0A0LYL4_CUCSA	3.6e-130	84.21	Thymidine kinase OS=Cucumis sativus OX=3659 GN=Csa_1G181480 PE=3 SV=1	[more]
tr\|A0A1S4E495\|A0A1S4E495_CUCME	1.3e-127	83.69	Thymidine kinase OS=Cucumis melo OX=3656 GN=LOC103501719 PE=3 SV=1	[more]
tr\|A0A2I4F9R8\|A0A2I4F9R8_9ROSI	3.3e-99	69.64	Thymidine kinase OS=Juglans regia OX=51240 GN=LOC108996815 PE=3 SV=1	[more]
tr\|A0A067LDR5\|A0A067LDR5_JATCU	1.5e-96	72.80	Thymidine kinase OS=Jatropha curcas OX=180498 GN=JCGZ_02929 PE=3 SV=1	[more]
tr\|A0A2P4IT83\|A0A2P4IT83_QUESU	4.5e-96	71.27	Thymidine kinase OS=Quercus suber OX=58331 GN=CFP56_31848 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004797	thymidine kinase activity
GO:0005524	ATP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR020633	Thymidine_kinase_CS
IPR001267	Thymidine_kinase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0006230	TMP biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004797	thymidine kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25612-RA	Carg25612-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 83..221 e-value: 3.2E-50 score: 171.5
None	No IPR available	GENE3D	G3DSA:3.30.60.20		coord: 222..264 e-value: 3.7E-18 score: 67.2
None	No IPR available	PANTHER	PTHR11441:SF2	THYMIDINE KINASE B	coord: 51..279
None	No IPR available	SUPERFAMILY	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 222..264
IPR001267	Thymidine kinase	PFAM	PF00265	TK	coord: 84..261 e-value: 3.4E-55 score: 186.6
IPR001267	Thymidine kinase	PANTHER	PTHR11441	THYMIDINE KINASE	coord: 51..279
IPR020633	Thymidine kinase, conserved site	PROSITE	PS00603	TK_CELLULAR_TYPE	coord: 248..261
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 84..222

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25612	Cla009043	Watermelon (97103) v1	carwmB0052
Carg25612	Csa1G181480	Cucumber (Chinese Long) v2	carcuB0051
Carg25612	MELO3C025541	Melon (DHL92) v3.5.1	carmeB0049
Carg25612	ClCG01G010620	Watermelon (Charleston Gray)	carwcgB0053
Carg25612	CSPI01G15760	Wild cucumber (PI 183967)	carcpiB0055
Carg25612	Cucsa.180490	Cucumber (Gy14) v1	carcgyB0058
Carg25612	CmaCh18G006010	Cucurbita maxima (Rimu)	carcmaB0060
Carg25612	CmoCh18G005930	Cucurbita moschata (Rifu)	carcmoB0063
Carg25612	Lsi02G011250	Bottle gourd (USVL1VR-Ls)	carlsiB046
Carg25612	Cp4.1LG09g06410	Cucurbita pepo (Zucchini)	carcpeB0065
Carg25612	CsGy1G015460	Cucumber (Gy14) v2	carcgybB0051
Carg25612	MELO3C025541.2	Melon (DHL92) v3.6.1	carmedB0051
Carg25612	CsaV3_UNG053440	Cucumber (Chinese Long) v3	carcucB0057
Carg25612	CsaV3_1G017040	Cucumber (Chinese Long) v3	carcucB0056
Carg25612	Cla97C01G010410	Watermelon (97103) v2	carwmbB0050
Carg25612	Bhi08G000630	Wax gourd	carwgoB0057

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg25612	Silver-seed gourd	carcarB055
Carg25612	Cucurbita maxima (Rimu)	carcmaB0059
Carg25612	Cucurbita moschata (Rifu)	carcmoB0062
Carg25612	Cucurbita pepo (Zucchini)	carcpeB0066