Csa1G181480 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGAGGAATGAAGAAGTGCAACTCCGTACCCCAACAGTTGTAGTGGATATAAATGTTGTATGCCTTTCGGGGCAAACAAACCTGAAATGCGCTCCCAATTCACTCTCCAACAACCCCCCCCATGTTCAACAATTTACAAATATTTCCCATCTCCAAACCCAAAACCCCATTAAAACCCTCGTTCAATTGCTCATCTTCACAACCATTTCAAACATGAAATCCTTCGTATTTTCCTCCTCTTTCTCAATCCTCTCCCCCTACTTCCCCATTTCTGCTTCTCCATCCTTCTTTTCTTTGCCTTCTAAATCTGCGCAATGCGGCCCTATGTTCACCCAACTCTCCAATTTTTTCACTTTCAAAACACCCACTATTTCGTTGCCCTCGAAAGGGTTTTTTTCAACCCAGAATCGAAACCCCCAGATGAGGGCCTCTTTGTCACCGCCCTCTGGCGAGATTCATGTCATTCTGGGGCCGATGTTTGCTGGGAAAACTACCACTCTTCTTCGGCGGATTCAGTCCGAGAGCTGCAATGGCAGGTCTTTTATGCTATGCTTTCCTTCTTCCGTTTATTAATTTTCTTTTTATCTTTTAATATATTCTCATCACTCTCTCTGTATTGGCTTGATTATTAGCACGGTTGGTATCGGTATGAAATGGGAAAAAAATCGTATTGAATTTACAACTTCATCCGCTATATTACTTCGATCGACACTGAATATGAGTGGTTGGGTGGATAAGTTATGGTGAATTTGATATTTTATACTATATCCCTACGAATTTCACAATAATAGAGTTATGCATATTGGTGCTGAATGAGGTTTAAGCTGATATATGATGTTGTGGGGTATGACCGCTTGATAGAGAATGAATGGAACGAGTGAATTGGCGAACTAAACTAACTGATTCTTTGAAGAGAAACCTTTAAATCCTTAATTTTTCCTTGCTCCTCGCTCCTCGCTCCCTTAACTCATTTTTTGAAACAAAAACAAAAAAACGTCTTTATTTTTTAGCTCAACATGGTAGAAGATAGCCTTATTAACGTTAGACCTCATGAACTTGGGTTTTTCTTTCAATGAAGACTGCTAATATGGAAACACTGTTGTACCAAGTTTAAAAGAGAATTCTCACCAAGGGGCTGGGTACATTTTCCACTCAACCTGTAAAATATAGGAACGTTTAAACAGGTAACATTCATTTACACCATGCTTTCTGAAGAGTATGAAGCAAATCAATCTACTTATCTGCTATTTGCTGTTGGATCACATAGTTTGGAGATGATACAAGAGTTCAATGACATTTGTGAAATAGACCTTAGAGAGGACATGTTCAAGTCATAGTGGCCCTCTATCTAAAATTTAATACCATCTGAAATTTAATATCATATGAGTTTATTTGACAAGTAAATGTAGCAGAGCTAACCAGCCAGATTATTGCCCTGTGACAATTGTTGAAGGTGCTCAAGTTAGCTGGAATACTCTCAAGAGAAGAAATTTGTGGAGTTTTTGATAGATTTAATATTTCGATGCTCTTCCTTAGTCCATGTTCACATTCTGGATCTTCGATTAAGCGGTCTTTGTCATCATTTTCATTTGTAGAATCTTTTTTTTCTTTGGGTTGGCATCTTGTCTTCCCTATTTTATATCTTTATATTGAAAATATTTCCCTAGCTTCTTATATTACCTTTTAAAATGTTAGAACCTAATTACTGGATGGAATGTGTACTCTGGTGTATCTTAATTGGTGTAGAAGCTTCCTTTTTTTGGTACAATTCAGAAGGTTTATTCCTTTTCCTTTTCATGCACTTTTTTTACAGAAGTGTAGCTATAATTAAGTCGAATAAAGACACAAGGTATGGATTGGATTCTATTGTTACACATGACGGCATGAAACTCCCTTGCTGGGCAATACCAAACTTATCATCTTTCAAAAAGAAATTTGGTCAAGGTTCTTATGACAAGGTATCATAATCTCTCTCTCTTTATGATGCCAATATCATGCTTAGACATTTTATTAATTAAAATACGAAATATTCAAGCCCTTATAAAAGGTAGCAAAGTATTTAAATCTATGAGGCTAAAAATTTGATTTCCAATTAGAATGAGCAGAAAACTGAATGAGTAGACTTCTGAATTAACCGTAATAATAGGAACTCCTGATTTTCTTGGTAACAGAATTGTTAATTTACATATGATGTTGGGGTGACAGCTAGATGTGATTGGAATTGATGAAGCTCAATTTTTCGACGATCTATATGATTTCTGTTGCGAAGCTGCTGATATTGATGGCAAAACAGTTATAGTTGCTGGGCTGGATGGGGATTACTTGAGGTATAATCAAATTTTCTGGCTTACTTTTGTTTCATACGTTTAATTTCAATGATGTTCTTAGAAACTGATGGCATTTCATATGGTAAAACATTCAATAGAACTTCAGATTGGTTTCTAAATTGACTGATCATTAGTAACTCAATTAAAGCTTTTGTGTTGGGGTTTATACAAAAAACTGAACAGGAGGAACTTCGGTTCAGTTCTCGATATAATTCCTCTTGCCGATTCTGTAACCAAGTTAACTGCTCGATGTGAAATCTGCGGGAATAGGGCTTTCTTTACTTTAAGGAAGACACAAGAAAAAGAGACTGAGCTGATTGGTGGTGCTGATATGTACATGCCCGTATGTCGACAACATTACGTCAGCGGGCAAGTAGCGATAGAGACAGCAAGAACTGTAGTAGAATCACGCAAGGTTGGGTATAGGACTCCAGCATAGTTCTTAGTAGGTAAAAGTAGGTCTTCGGCATCATATACATCCCCATGGTGAGCATAGTTGTAGGGTTAGGGATATTGTTTTGTTTAGAAACTGTAATTGAGTTAATTATGCCTGTATTTTGATGGCTGCTTTGATTGATTGGATTAGATGGAAGGAAAAAACGAGTCAAATGTTGTATGTAACCAACAAAATTGAAAACTAATACATTATTGGGGGAGGAGACATTCAAAGTGGCAACCATGTGTTAGTTTGGGAAGTTGTTGATCAGCCAG ATGGTGAGGAATGAAGAAGTGCAACTCCGTACCCCAACAGTTGTAGTGGATATAAATGTTGTATGCCTTTCGGGGCAAACAAACCTGAAATGCGCTCCCAATTCACTCTCCAACAACCCCCCCCATGTTCAACAATTTACAAATATTTCCCATCTCCAAACCCAAAACCCCATTAAAACCCTCGTTCAATTGCTCATCTTCACAACCATTTCAAACATGAAATCCTTCGTATTTTCCTCCTCTTTCTCAATCCTCTCCCCCTACTTCCCCATTTCTGCTTCTCCATCCTTCTTTTCTTTGCCTTCTAAATCTGCGCAATGCGGCCCTATGTTCACCCAACTCTCCAATTTTTTCACTTTCAAAACACCCACTATTTCGTTGCCCTCGAAAGGGTTTTTTTCAACCCAGAATCGAAACCCCCAGATGAGGGCCTCTTTGTCACCGCCCTCTGGCGAGATTCATGTCATTCTGGGGCCGATGTTTGCTGGGAAAACTACCACTCTTCTTCGGCGGATTCAGTCCGAGAGCTGCAATGGCAGAAGTGTAGCTATAATTAAGTCGAATAAAGACACAAGGTATGGATTGGATTCTATTGTTACACATGACGGCATGAAACTCCCTTGCTGGGCAATACCAAACTTATCATCTTTCAAAAAGAAATTTGGTCAAGGTTCTTATGACAAGCTAGATGTGATTGGAATTGATGAAGCTCAATTTTTCGACGATCTATATGATTTCTGTTGCGAAGCTGCTGATATTGATGGCAAAACAGTTATAGTTGCTGGGCTGGATGGGGATTACTTGAGGAGGAACTTCGGTTCAGTTCTCGATATAATTCCTCTTGCCGATTCTGTAACCAAGTTAACTGCTCGATGTGAAATCTGCGGGAATAGGGCTTTCTTTACTTTAAGGAAGACACAAGAAAAAGAGACTGAGCTGATTGGTGGTGCTGATATGTACATGCCCGTATGTCGACAACATTACGTCAGCGGGCAAGTAGCGATAGAGACAGCAAGAACTGTAGTAGAATCACGCAAGGTTGGGTATAGGACTCCAGCATAG ATGGTGAGGAATGAAGAAGTGCAACTCCGTACCCCAACAGTTGTAGTGGATATAAATGTTGTATGCCTTTCGGGGCAAACAAACCTGAAATGCGCTCCCAATTCACTCTCCAACAACCCCCCCCATGTTCAACAATTTACAAATATTTCCCATCTCCAAACCCAAAACCCCATTAAAACCCTCGTTCAATTGCTCATCTTCACAACCATTTCAAACATGAAATCCTTCGTATTTTCCTCCTCTTTCTCAATCCTCTCCCCCTACTTCCCCATTTCTGCTTCTCCATCCTTCTTTTCTTTGCCTTCTAAATCTGCGCAATGCGGCCCTATGTTCACCCAACTCTCCAATTTTTTCACTTTCAAAACACCCACTATTTCGTTGCCCTCGAAAGGGTTTTTTTCAACCCAGAATCGAAACCCCCAGATGAGGGCCTCTTTGTCACCGCCCTCTGGCGAGATTCATGTCATTCTGGGGCCGATGTTTGCTGGGAAAACTACCACTCTTCTTCGGCGGATTCAGTCCGAGAGCTGCAATGGCAGAAGTGTAGCTATAATTAAGTCGAATAAAGACACAAGGTATGGATTGGATTCTATTGTTACACATGACGGCATGAAACTCCCTTGCTGGGCAATACCAAACTTATCATCTTTCAAAAAGAAATTTGGTCAAGGTTCTTATGACAAGCTAGATGTGATTGGAATTGATGAAGCTCAATTTTTCGACGATCTATATGATTTCTGTTGCGAAGCTGCTGATATTGATGGCAAAACAGTTATAGTTGCTGGGCTGGATGGGGATTACTTGAGGAGGAACTTCGGTTCAGTTCTCGATATAATTCCTCTTGCCGATTCTGTAACCAAGTTAACTGCTCGATGTGAAATCTGCGGGAATAGGGCTTTCTTTACTTTAAGGAAGACACAAGAAAAAGAGACTGAGCTGATTGGTGGTGCTGATATGTACATGCCCGTATGTCGACAACATTACGTCAGCGGGCAAGTAGCGATAGAGACAGCAAGAACTGTAGTAGAATCACGCAAGGTTGGGTATAGGACTCCAGCATAG MVRNEEVQLRTPTVVVDINVVCLSGQTNLKCAPNSLSNNPPHVQQFTNISHLQTQNPIKTLVQLLIFTTISNMKSFVFSSSFSILSPYFPISASPSFFSLPSKSAQCGPMFTQLSNFFTFKTPTISLPSKGFFSTQNRNPQMRASLSPPSGEIHVILGPMFAGKTTTLLRRIQSESCNGRSVAIIKSNKDTRYGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKLDVIGIDEAQFFDDLYDFCCEAADIDGKTVIVAGLDGDYLRRNFGSVLDIIPLADSVTKLTARCEICGNRAFFTLRKTQEKETELIGGADMYMPVCRQHYVSGQVAIETARTVVESRKVGYRTPA*
BLAST of Csa1G181480 vs. Swiss-Prot
Match: KITH_ORYSJ (Thymidine kinase OS=Oryza sativa subsp. japonica GN=TK PE=2 SV=2) HSP 1 Score: 312.4 bits (799), Expect = 6.4e-84 Identity = 152/206 (73.79%), Postives = 173/206 (83.98%), Query Frame = 1
BLAST of Csa1G181480 vs. Swiss-Prot
Match: KITHB_ARATH (Thymidine kinase b OS=Arabidopsis thaliana GN=TK1B PE=1 SV=1) HSP 1 Score: 302.4 bits (773), Expect = 6.6e-81 Identity = 149/222 (67.12%), Postives = 181/222 (81.53%), Query Frame = 1
BLAST of Csa1G181480 vs. Swiss-Prot
Match: KITHA_ARATH (Thymidine kinase a OS=Arabidopsis thaliana GN=TK1A PE=1 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 6.2e-79 Identity = 135/194 (69.59%), Postives = 168/194 (86.60%), Query Frame = 1
BLAST of Csa1G181480 vs. Swiss-Prot
Match: KITH_SWPVK (Thymidine kinase OS=Swinepox virus (strain Kasza) GN=TK PE=3 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 2.9e-36 Identity = 81/180 (45.00%), Postives = 114/180 (63.33%), Query Frame = 1
BLAST of Csa1G181480 vs. Swiss-Prot
Match: KITH_MOUSE (Thymidine kinase, cytosolic OS=Mus musculus GN=Tk1 PE=1 SV=3) HSP 1 Score: 144.1 bits (362), Expect = 3.0e-33 Identity = 89/185 (48.11%), Postives = 113/185 (61.08%), Query Frame = 1
BLAST of Csa1G181480 vs. TrEMBL
Match: A0A0A0LYL4_CUCSA (Thymidine kinase OS=Cucumis sativus GN=Csa_1G181480 PE=3 SV=1) HSP 1 Score: 710.3 bits (1832), Expect = 1.2e-201 Identity = 353/353 (100.00%), Postives = 353/353 (100.00%), Query Frame = 1
BLAST of Csa1G181480 vs. TrEMBL
Match: A0A0D2UIS2_GOSRA (Thymidine kinase OS=Gossypium raimondii GN=B456_010G249600 PE=3 SV=1) HSP 1 Score: 361.3 bits (926), Expect = 1.3e-96 Identity = 190/281 (67.62%), Postives = 220/281 (78.29%), Query Frame = 1
BLAST of Csa1G181480 vs. TrEMBL
Match: A0A0B0NWB9_GOSAR (Thymidine kinase OS=Gossypium arboreum GN=F383_05181 PE=3 SV=1) HSP 1 Score: 360.9 bits (925), Expect = 1.8e-96 Identity = 188/282 (66.67%), Postives = 222/282 (78.72%), Query Frame = 1
BLAST of Csa1G181480 vs. TrEMBL
Match: A0A067LDR5_JATCU (Thymidine kinase OS=Jatropha curcas GN=JCGZ_02929 PE=3 SV=1) HSP 1 Score: 357.8 bits (917), Expect = 1.5e-95 Identity = 191/268 (71.27%), Postives = 216/268 (80.60%), Query Frame = 1
BLAST of Csa1G181480 vs. TrEMBL
Match: I3SNW4_LOTJA (Thymidine kinase OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 356.7 bits (914), Expect = 3.3e-95 Identity = 189/276 (68.48%), Postives = 217/276 (78.62%), Query Frame = 1
BLAST of Csa1G181480 vs. TAIR10
Match: AT5G23070.1 (AT5G23070.1 Thymidine kinase) HSP 1 Score: 302.4 bits (773), Expect = 3.7e-82 Identity = 149/222 (67.12%), Postives = 181/222 (81.53%), Query Frame = 1
BLAST of Csa1G181480 vs. TAIR10
Match: AT3G07800.1 (AT3G07800.1 Thymidine kinase) HSP 1 Score: 295.8 bits (756), Expect = 3.5e-80 Identity = 135/194 (69.59%), Postives = 168/194 (86.60%), Query Frame = 1
BLAST of Csa1G181480 vs. NCBI nr
Match: gi|700209940|gb|KGN65036.1| (Thymidine kinase [Cucumis sativus]) HSP 1 Score: 710.3 bits (1832), Expect = 1.7e-201 Identity = 353/353 (100.00%), Postives = 353/353 (100.00%), Query Frame = 1
BLAST of Csa1G181480 vs. NCBI nr
Match: gi|778659746|ref|XP_011654956.1| (PREDICTED: thymidine kinase [Cucumis sativus]) HSP 1 Score: 568.2 bits (1463), Expect = 1.0e-158 Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 1
BLAST of Csa1G181480 vs. NCBI nr
Match: gi|659127259|ref|XP_008463610.1| (PREDICTED: thymidine kinase-like [Cucumis melo]) HSP 1 Score: 544.7 bits (1402), Expect = 1.2e-151 Identity = 270/281 (96.09%), Postives = 273/281 (97.15%), Query Frame = 1
BLAST of Csa1G181480 vs. NCBI nr
Match: gi|743893916|ref|XP_011040200.1| (PREDICTED: thymidine kinase-like [Populus euphratica]) HSP 1 Score: 369.0 bits (946), Expect = 9.2e-99 Identity = 197/282 (69.86%), Postives = 226/282 (80.14%), Query Frame = 1
BLAST of Csa1G181480 vs. NCBI nr
Match: gi|359497110|ref|XP_002266298.2| (PREDICTED: thymidine kinase-like isoform X2 [Vitis vinifera]) HSP 1 Score: 364.8 bits (935), Expect = 1.7e-97 Identity = 195/277 (70.40%), Postives = 222/277 (80.14%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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