Cucsa.307920 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.307920
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionLateral root primordium protein-related, putative
Locationscaffold02978 : 199559 .. 200995 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTCAAATCATTTCTTCTGATCATCATCCATCTCTTCCTCTTCCCTCCTCCACCGCTCTCGGCGTTAGCGTCGGCATTTTCCCCCTTCTCGCTGCAACCCCATGTCTCCCTCCCTCCCAGCCCCCGCCAAATAATCACACACCTGACGATGTTACCGATCGTACTCGCACTTTCGACAATCTTAAGAGAACCCAAGATTTTGGCTTTGGGAAAGGAGAATCCTTGATCGCCGGTCCCGGAAATAATGGCTCCGACGAACATGTGAAAGGCGATGCTGGGGATGGCTCTATGGCTGTATGTAGGGACTGTGGAAACAGAGCAAAAAAGGAGTGCGAGTATCGGAGGTGCAGGACTTGTTGCAAGGGACGTGGGAATCATTGCTCTACGCACGTGAAGAGCACGTGGGTGCCTGCGGCTCGCCGCCGTGAGCGGCAGATGTTGGTGGTTATGGACGGCGTTGCCACTGCTAGTGGCGACGGAGGGTCTTCCGGTTCTTCTTCTGCTGGTGCTAAAAGGCCTAGAGTTTTGATTCCTTCACAGAGTGCTGCCGCGGCCGCCGCTGCTTCCACTTCCAATGCCACAACTCCCCGGAGTTTTGAAACAACCTCTAGCCATCAAGGTAAATCTCTCTCTAAATCTCTTTTTCCATTCTTCCATTTTTGTTTTCTTGTGCTTCTCAACGAATTCCGAATCATGAGCAGAAATTAATGGGATATCTGTTTACTCTGTTTCTTTCTGTTTAATGATTTGGTTACTTGTTTCTACGTGTATAAATTTGTAAAATTTTTATGAGTAGTTTTTATTTTAGTTCTCTTTGAAGATCTTGCAGCAAATTTAACGAAACATGTTCATTAGGTATGTTGTTCGAAAACTTACCATCCTTTCATGTTATAACTCTGTTTTTCTCCTCTCTCTCTCTCCTTTCTCCAACAAGGAGGGAGTGACTTATATATAAAAGTAGAATTTAGGACCGTTTGTAAATGGCATTTCGAGTGCTTAAAAGATAAGTTTTTGTTTTTTTAAGTGTTTGTGTTTAGTAAGGAGCTTAAGTATTTAAAAAGGGGTTCAAGTGTTTAGAAAGCCATTCCAAACAGGCTTTGTGCTGTTAAAACATGCACATCTATATGTATTCTAACTGTGTTTTTTTAGCAACAAGATCATTTTCTAAACCCACCTCTTGGAATTCTCCTCACTTTGAAACCAGATGCAAGCTTCAAGAAGTCATTACCAGGGCATGTTCGAGCTCCAGCCGTGTTCAGGTGCCATAGAGTGACTGCCATTAGCAGTGGTGAAGGTGAGTTAGCTTACCAAGCAACAGTCAATATTGGTGGTCATGTCTTCAAAGGCTTCCTCTATGATCAAGGAGCTGATGACAAAAATGCATTCCCATCTATTTCACATCTCCATTTGGACAGTGGTAACCACCACAGGGAATAG

mRNA sequence

ACTCAAATCATTTCTTCTGATCATCATCCATCTCTTCCTCTTCCCTCCTCCACCGCTCTCGGCGTTAGCGTCGGCATTTTCCCCCTTCTCGCTGCAACCCCATGTCTCCCTCCCTCCCAGCCCCCGCCAAATAATCACACACCTGACGATGTTACCGATCGTACTCGCACTTTCGACAATCTTAAGAGAACCCAAGATTTTGGCTTTGGGAAAGGAGAATCCTTGATCGCCGGTCCCGGAAATAATGGCTCCGACGAACATGTGAAAGGCGATGCTGGGGATGGCTCTATGGCTGTATGTAGGGACTGTGGAAACAGAGCAAAAAAGGAGTGCGAGTATCGGAGGTGCAGGACTTGTTGCAAGGGACGTGGGAATCATTGCTCTACGCACGTGAAGAGCACGTGGGTGCCTGCGGCTCGCCGCCGTGAGCGGCAGATGTTGGTGGTTATGGACGGCGTTGCCACTGCTAGTGGCGACGGAGGGTCTTCCGGTTCTTCTTCTGCTGGTGCTAAAAGGCCTAGAGTTTTGATTCCTTCACAGAGTGCTGCCGCGGCCGCCGCTGCTTCCACTTCCAATGCCACAACTCCCCGGAGTTTTGAAACAACCTCTAGCCATCAAGATGCAAGCTTCAAGAAGTCATTACCAGGGCATGTTCGAGCTCCAGCCGTGTTCAGGTGCCATAGAGTGACTGCCATTAGCAGTGGTGAAGGTGAGTTAGCTTACCAAGCAACAGTCAATATTGGTGGTCATGTCTTCAAAGGCTTCCTCTATGATCAAGGAGCTGATGACAAAAATGCATTCCCATCTATTTCACATCTCCATTTGGACAGTGGTAACCACCACAGGGAATAG

Coding sequence (CDS)

ACTCAAATCATTTCTTCTGATCATCATCCATCTCTTCCTCTTCCCTCCTCCACCGCTCTCGGCGTTAGCGTCGGCATTTTCCCCCTTCTCGCTGCAACCCCATGTCTCCCTCCCTCCCAGCCCCCGCCAAATAATCACACACCTGACGATGTTACCGATCGTACTCGCACTTTCGACAATCTTAAGAGAACCCAAGATTTTGGCTTTGGGAAAGGAGAATCCTTGATCGCCGGTCCCGGAAATAATGGCTCCGACGAACATGTGAAAGGCGATGCTGGGGATGGCTCTATGGCTGTATGTAGGGACTGTGGAAACAGAGCAAAAAAGGAGTGCGAGTATCGGAGGTGCAGGACTTGTTGCAAGGGACGTGGGAATCATTGCTCTACGCACGTGAAGAGCACGTGGGTGCCTGCGGCTCGCCGCCGTGAGCGGCAGATGTTGGTGGTTATGGACGGCGTTGCCACTGCTAGTGGCGACGGAGGGTCTTCCGGTTCTTCTTCTGCTGGTGCTAAAAGGCCTAGAGTTTTGATTCCTTCACAGAGTGCTGCCGCGGCCGCCGCTGCTTCCACTTCCAATGCCACAACTCCCCGGAGTTTTGAAACAACCTCTAGCCATCAAGATGCAAGCTTCAAGAAGTCATTACCAGGGCATGTTCGAGCTCCAGCCGTGTTCAGGTGCCATAGAGTGACTGCCATTAGCAGTGGTGAAGGTGAGTTAGCTTACCAAGCAACAGTCAATATTGGTGGTCATGTCTTCAAAGGCTTCCTCTATGATCAAGGAGCTGATGACAAAAATGCATTCCCATCTATTTCACATCTCCATTTGGACAGTGGTAACCACCACAGGGAATAG

Protein sequence

TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNHHRE*
Homology
[Close]
BLAST of Cucsa.307920 vs. Swiss-Prot
Match: LRP1_ARATH (Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana GN=LRP1 PE=1 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.2e-56
Identity = 132/287 (45.99%), Postives = 166/287 (57.84%), Query Frame = 1 

Query: 3   IISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVT-----DRTRT 62
           +IS   H +    ++ ALGV  G+ PLL A         P  N    D+       R + 
Sbjct: 23  VISGSDHMNSNAAAAAALGV--GVIPLLTAGT-------PQQNVEDSDINFLGNNRRWQN 82

Query: 63  FDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCR 122
            +N   TQ   F        G  +N S       +G    A C+DCGN+AKKEC+ RRCR
Sbjct: 83  NNNNHETQYLHFKSTNQTTVGTSSNNSGS----GSGASGTATCQDCGNQAKKECKQRRCR 142

Query: 123 TCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLI 182
           TCCK RG  CSTHVKSTWV AARRRERQ++        A+   GSS S+S+G K+PR++ 
Sbjct: 143 TCCKSRGFDCSTHVKSTWVSAARRRERQVMPT-----GANPTAGSSLSTSSGTKKPRIVG 202

Query: 183 PSQSAAAAAAASTSNATTP-RSFETTSSHQDAS-FKKSLPGHVRAPAVFRCHRVTAISSG 242
             Q     A + TS + TP +SFET+SS QD    +++ PG VRA AVF+C RVTA+  G
Sbjct: 203 SQQQQQQQATSHTSTSNTPPQSFETSSSRQDGGGSREAWPGQVRAAAVFKCVRVTAVEDG 262

Query: 243 EGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHL-DSGNHH 282
           + E AYQA V IGGHVFKGFLYDQG + K  FPS+S LHL  S N+H
Sbjct: 263 DDEYAYQAVVKIGGHVFKGFLYDQGLEPKEGFPSMSDLHLGGSANNH 291

[Close]
BLAST of Cucsa.307920 vs. Swiss-Prot
Match: SRS2_ARATH (Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=SRS2 PE=2 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.2e-35
Identity = 80/164 (48.78%), Postives = 103/164 (62.80%), Query Frame = 1 

Query: 100 CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGD 159
           CRDCGN+AKK+C + RCRTCCK RG  CSTHV+STW+P ARRRERQ  + M    + SG 
Sbjct: 94  CRDCGNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHM----STSGG 153

Query: 160 GGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVR 219
           GG SGS  AG       IP +        ++S++  P S        +ASF    PG V 
Sbjct: 154 GGGSGSGGAGGGGSS--IPKRHRDPTLPGTSSSSRLP-SHSAGLEMGEASF----PGEVS 213

Query: 220 APAVFRCHRVTAI-SSGEGELAYQATVNIGGHVFKGFLYDQGAD 263
           + A+FRC +++ +   G+G+ AYQ TVNIGGH+FKG LYDQG +
Sbjct: 214 SDALFRCVKMSGVDDGGDGQYAYQTTVNIGGHLFKGILYDQGPE 246

[Close]
BLAST of Cucsa.307920 vs. Swiss-Prot
Match: SRS6_ARATH (Protein SHI RELATED SEQUENCE 6 OS=Arabidopsis thaliana GN=SRS6 PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.9e-34
Identity = 78/174 (44.83%), Postives = 100/174 (57.47%), Query Frame = 1 

Query: 99  VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASG 158
           VCRDCGNRAKKEC + RCRTCCK RG +C THVKSTW+P++  R                
Sbjct: 40  VCRDCGNRAKKECLFERCRTCCKSRGYNCVTHVKSTWIPSSATR---------------- 99

Query: 159 DGGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHV 218
                 SSS   ++ ++ I  QS+   +              TT+S Q+  F++ LPG +
Sbjct: 100 -----SSSSPSERKKKLKIDKQSSPNVSL-----------LPTTTSRQERGFREGLPGKI 159

Query: 219 RAPAVFRCHRVTAISSGE-GELAYQATVNIGGHVFKGFLYDQGADDKNAFPSIS 272
            APAVF+  RVTAIS+ E  E+ YQATV I GH+FKGFL+  G D   AFP +S
Sbjct: 160 EAPAVFKRTRVTAISNNEQAEIGYQATVTISGHIFKGFLHYYGVDHNKAFPCLS 181

[Close]
BLAST of Cucsa.307920 vs. Swiss-Prot
Match: SRS1_ARATH (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana GN=SRS1 PE=1 SV=2)

HSP 1 Score: 141.4 bits (355), Expect = 1.6e-32
Identity = 83/191 (43.46%), Postives = 108/191 (56.54%), Query Frame = 1 

Query: 72  GESLIAGPGNNGSDEHVK-GDAGDGSMAV-CRDCGNRAKKECEYRRCRTCCKGRGNHCST 131
           GE+  AG G   +   ++ G +G GS  V C+DCGN+AKK+C + RCRTCCK RG  CST
Sbjct: 114 GETSTAGAGRAAAMMMIRSGGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECST 173

Query: 132 HVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAAS 191
           HV+STWVPAA+RRERQ  +      T    G S        KR R  +P+ S++      
Sbjct: 174 HVRSTWVPAAKRRERQQQLATVQPQTQLPRGESV------PKRHRENLPATSSSLVCTRI 233

Query: 192 TSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGG 251
            S+          S  +  +F    P  V + AVFRC RV+++  GE E AYQ  V+IGG
Sbjct: 234 PSH----------SGLEVGNF----PAEVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGG 284

Query: 252 HVFKGFLYDQG 261
           H+FKG LYD G
Sbjct: 294 HIFKGILYDLG 284

[Close]
BLAST of Cucsa.307920 vs. Swiss-Prot
Match: SHI_ARATH (Protein SHORT INTERNODES OS=Arabidopsis thaliana GN=SHI PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.7e-31
Identity = 87/206 (42.23%), Postives = 115/206 (55.83%), Query Frame = 1 

Query: 64  TQDFGFGKG---ESLIAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCC 123
           T   G G G    SLI   G  G+   ++  +G G  + C+DCGN++KK+C + RCRTCC
Sbjct: 84  TSAAGLGVGPSNRSLIETSG--GALMMMRSGSGSGGPS-CQDCGNQSKKDCSHMRCRTCC 143

Query: 124 KGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ 183
           K RG  C THVKSTWVPAA+RRERQ       ++T        GS     KR R  IP++
Sbjct: 144 KSRGLDCPTHVKSTWVPAAKRRERQ-----QQLSTGQQPQQLGGSV---PKRQRERIPAR 203

Query: 184 SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELA 243
           S + A     SN         TS  +  +F    P  V + AVFRC RV+++   E E A
Sbjct: 204 STSMAYTRIPSN--------NTSGLEVGNF----PPEVSSSAVFRCVRVSSVDDEEEEYA 263

Query: 244 YQATVNIGGHVFKGFLYDQGADDKNA 267
           Y+  V+IGGHVFKG LYDQG  ++++
Sbjct: 264 YKTAVSIGGHVFKGVLYDQGPAERSS 266

[Close]
BLAST of Cucsa.307920 vs. TrEMBL
Match: A0A0A0KWX6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G623840 PE=4 SV=1)

HSP 1 Score: 585.9 bits (1509), Expect = 2.7e-164
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 1 

Query: 1   TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDN 60
           TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDN
Sbjct: 21  TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDN 80

Query: 61  LKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCC 120
           LKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCC
Sbjct: 81  LKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCC 140

Query: 121 KGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ 180
           KGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
Sbjct: 141 KGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ 200

Query: 181 SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELA 240
           SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELA
Sbjct: 201 SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELA 260

Query: 241 YQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNHHRE 284
           YQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNHHRE
Sbjct: 261 YQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNHHRE 303

[Close]
BLAST of Cucsa.307920 vs. TrEMBL
Match: A0A0S3SKJ2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G233000 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 5.6e-69
Identity = 156/293 (53.24%), Postives = 186/293 (63.48%), Query Frame = 1 

Query: 2   QIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPD------DVTDRT 61
           Q IS +  P+LPLPSS AL V  GIFPLL ATPC+P   P   N   D        T  T
Sbjct: 22  QPISENQTPNLPLPSSAALSVGFGIFPLLTATPCVP--HPHQTNEIQDCGAAAGGNTTTT 81

Query: 62  RTFDNLKRTQDFGFGKGESLIAGPGNNGSDE---HVKG--DAGDGSM-----AVCRDCGN 121
             + NLK   +    K   +     +   DE   H KG  ++ +  +      VC+DCGN
Sbjct: 82  TNYWNLKMCPEVNPPKKGVINMDDDDEEDDERHHHHKGMMESEENGIYGPDFRVCQDCGN 141

Query: 122 RAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGS 181
           RAKK+C +RRCRTCCKGRG  CSTHVKSTWVP+ RRRER+M+V     A A G GG    
Sbjct: 142 RAKKDCIFRRCRTCCKGRGYDCSTHVKSTWVPSIRRREREMVV-----APAGGVGG---- 201

Query: 182 SSAGAKRPRVLI-PSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVF 241
              G+KRPR ++  SQ+A A + +S SNATTP+S  T SSHQDASFK+SLPGHVRAPAVF
Sbjct: 202 ---GSKRPRAIVGSSQNATATSHSSNSNATTPKSLATISSHQDASFKQSLPGHVRAPAVF 261

Query: 242 RCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK--NAFPSISHLHL 276
           +CHRV+AI +GE E AY ATV+I GHVFKGFLYD G D K  NA P +S L L
Sbjct: 262 KCHRVSAIGNGEDEFAYLATVHISGHVFKGFLYDHGVDGKIANAVPCVSELQL 300

[Close]
BLAST of Cucsa.307920 vs. TrEMBL
Match: A0A0L9UIA1_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan05g003000 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 5.6e-69
Identity = 156/293 (53.24%), Postives = 186/293 (63.48%), Query Frame = 1 

Query: 2   QIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPD------DVTDRT 61
           Q IS +  P+LPLPSS AL V  GIFPLL ATPC+P   P   N   D        T  T
Sbjct: 22  QPISENQTPNLPLPSSAALSVGFGIFPLLTATPCVP--HPHQTNEIQDCGAAAGGNTTTT 81

Query: 62  RTFDNLKRTQDFGFGKGESLIAGPGNNGSDE---HVKG--DAGDGSM-----AVCRDCGN 121
             + NLK   +    K   +     +   DE   H KG  ++ +  +      VC+DCGN
Sbjct: 82  TNYWNLKMCPEVNPPKKGVINMDDDDEEDDERHHHHKGMMESEENGIYGPDFRVCQDCGN 141

Query: 122 RAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGS 181
           RAKK+C +RRCRTCCKGRG  CSTHVKSTWVP+ RRRER+M+V     A A G GG    
Sbjct: 142 RAKKDCIFRRCRTCCKGRGYDCSTHVKSTWVPSIRRREREMVV-----APAGGVGG---- 201

Query: 182 SSAGAKRPRVLI-PSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVF 241
              G+KRPR ++  SQ+A A + +S SNATTP+S  T SSHQDASFK+SLPGHVRAPAVF
Sbjct: 202 ---GSKRPRAIVGSSQNATATSHSSNSNATTPKSLATISSHQDASFKQSLPGHVRAPAVF 261

Query: 242 RCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK--NAFPSISHLHL 276
           +CHRV+AI +GE E AY ATV+I GHVFKGFLYD G D K  NA P +S L L
Sbjct: 262 KCHRVSAIGNGEDEFAYLATVHISGHVFKGFLYDHGVDGKIANAVPCVSELQL 300

[Close]
BLAST of Cucsa.307920 vs. TrEMBL
Match: A0A0D2Q8N8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G123900 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 6.1e-68
Identity = 152/298 (51.01%), Postives = 182/298 (61.07%), Query Frame = 1 

Query: 8   HHPSLPLPS---------STALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRT- 67
           HH   P+ S         STALGV VG+FPLL A PCL P     N   PD   +  RT 
Sbjct: 27  HHTQDPIMSNDQISGPSASTALGVGVGVFPLLTAAPCLAPL----NVEDPDLFNNNGRTK 86

Query: 68  --------------FDNLKRTQDFGFGKGES---LIAGPGNNGSDEHVKGDAGDGSMAVC 127
                          + LK+   F      S   LI   G  G  +   G +G  S   C
Sbjct: 87  LSGMQLWQDQNSSPHNYLKKPSSFPDSNNSSSMNLIQSSGGGGMGDRESGGSGSSSATTC 146

Query: 128 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 187
           +DCGN+AKK+C +RRCRTCCK RG  C THVKSTWVPAARRRERQ++      A  +   
Sbjct: 147 QDCGNQAKKDCSHRRCRTCCKSRGFDCPTHVKSTWVPAARRRERQLMAA----AVTTAGA 206

Query: 188 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA 247
           GSSGS+S GAK+PR LI SQ+   +   STSN TTPRSF+T+SS+QDA FK++LPG VRA
Sbjct: 207 GSSGSTS-GAKKPR-LITSQNTTTSHT-STSN-TTPRSFDTSSSNQDAGFKETLPGQVRA 266

Query: 248 PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSG 279
           PAVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYDQG + ++ FP+IS LHL  G
Sbjct: 267 PAVFKCVRVTAVEDGDDEFAYQAIVKIGGHVFKGFLYDQGVEGRDGFPNISELHLGGG 312

[Close]
BLAST of Cucsa.307920 vs. TrEMBL
Match: G7J0K6_MEDTR (LRP1 carboxy-terminal domain protein OS=Medicago truncatula GN=MTR_3g014660 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.0e-67
Identity = 140/278 (50.36%), Postives = 177/278 (63.67%), Query Frame = 1 

Query: 2   QIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNL 61
           Q IS DH+ +  LPSS +L V  GIFPLL ATPC+P  Q   NN   ++ ++    F NL
Sbjct: 35  QPISHDHNSNHSLPSSASLSVGFGIFPLLTATPCMPQQQSQ-NNEVQENPSNNNN-FWNL 94

Query: 62  KRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGD---GSMAVCRDCGNRAKKECEYRRCRT 121
           +   +      + +I    N+G    ++ +          VC+DCGNRAKK+C +RRCRT
Sbjct: 95  RMCPEVVNLPKKGVITEEENHGKIAMMESEENGVYGSEYRVCQDCGNRAKKDCVFRRCRT 154

Query: 122 CCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLI- 181
           CCKGRG  CSTH+KSTW+P+ RRRER++ +           GG  G   +G KR + L+ 
Sbjct: 155 CCKGRGYDCSTHLKSTWIPSTRRREREVEMFA---------GGGDGEGCSGVKRQKGLLG 214

Query: 182 PSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEG 241
            SQ+AAA + +S SN TTP+SF T+S HQDA FK+ LPGHV APAVFRCHRVTAI +GE 
Sbjct: 215 SSQNAAATSHSSNSNGTTPKSFATSSCHQDAGFKEGLPGHVNAPAVFRCHRVTAIGNGED 274

Query: 242 ELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHL 276
           E AY ATV+I GHVFKGFLYD G D KN  P +S L L
Sbjct: 275 EFAYLATVHISGHVFKGFLYDHGVDGKNPMPCVSELQL 301

[Close]
BLAST of Cucsa.307920 vs. TAIR10
Match: AT5G12330.4 (AT5G12330.4 Lateral root primordium (LRP) protein-related)

HSP 1 Score: 221.5 bits (563), Expect = 6.7e-58
Identity = 132/287 (45.99%), Postives = 166/287 (57.84%), Query Frame = 1 

Query: 3   IISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVT-----DRTRT 62
           +IS   H +    ++ ALGV  G+ PLL A         P  N    D+       R + 
Sbjct: 110 VISGSDHMNSNAAAAAALGV--GVIPLLTAGT-------PQQNVEDSDINFLGNNRRWQN 169

Query: 63  FDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCR 122
            +N   TQ   F        G  +N S       +G    A C+DCGN+AKKEC+ RRCR
Sbjct: 170 NNNNHETQYLHFKSTNQTTVGTSSNNSGS----GSGASGTATCQDCGNQAKKECKQRRCR 229

Query: 123 TCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLI 182
           TCCK RG  CSTHVKSTWV AARRRERQ++        A+   GSS S+S+G K+PR++ 
Sbjct: 230 TCCKSRGFDCSTHVKSTWVSAARRRERQVMPT-----GANPTAGSSLSTSSGTKKPRIVG 289

Query: 183 PSQSAAAAAAASTSNATTP-RSFETTSSHQDAS-FKKSLPGHVRAPAVFRCHRVTAISSG 242
             Q     A + TS + TP +SFET+SS QD    +++ PG VRA AVF+C RVTA+  G
Sbjct: 290 SQQQQQQQATSHTSTSNTPPQSFETSSSRQDGGGSREAWPGQVRAAAVFKCVRVTAVEDG 349

Query: 243 EGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHL-DSGNHH 282
           + E AYQA V IGGHVFKGFLYDQG + K  FPS+S LHL  S N+H
Sbjct: 350 DDEYAYQAVVKIGGHVFKGFLYDQGLEPKEGFPSMSDLHLGGSANNH 378

[Close]
BLAST of Cucsa.307920 vs. TAIR10
Match: AT4G36260.1 (AT4G36260.1 Lateral root primordium (LRP) protein-related)

HSP 1 Score: 151.8 bits (382), Expect = 6.6e-37
Identity = 80/164 (48.78%), Postives = 103/164 (62.80%), Query Frame = 1 

Query: 100 CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGD 159
           CRDCGN+AKK+C + RCRTCCK RG  CSTHV+STW+P ARRRERQ  + M    + SG 
Sbjct: 94  CRDCGNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHM----STSGG 153

Query: 160 GGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVR 219
           GG SGS  AG       IP +        ++S++  P S        +ASF    PG V 
Sbjct: 154 GGGSGSGGAGGGGSS--IPKRHRDPTLPGTSSSSRLP-SHSAGLEMGEASF----PGEVS 213

Query: 220 APAVFRCHRVTAI-SSGEGELAYQATVNIGGHVFKGFLYDQGAD 263
           + A+FRC +++ +   G+G+ AYQ TVNIGGH+FKG LYDQG +
Sbjct: 214 SDALFRCVKMSGVDDGGDGQYAYQTTVNIGGHLFKGILYDQGPE 246

[Close]
BLAST of Cucsa.307920 vs. TAIR10
Match: AT3G54430.1 (AT3G54430.1 SHI-related sequence 6)

HSP 1 Score: 147.1 bits (370), Expect = 1.6e-35
Identity = 78/174 (44.83%), Postives = 100/174 (57.47%), Query Frame = 1 

Query: 99  VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASG 158
           VCRDCGNRAKKEC + RCRTCCK RG +C THVKSTW+P++  R                
Sbjct: 40  VCRDCGNRAKKECLFERCRTCCKSRGYNCVTHVKSTWIPSSATR---------------- 99

Query: 159 DGGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHV 218
                 SSS   ++ ++ I  QS+   +              TT+S Q+  F++ LPG +
Sbjct: 100 -----SSSSPSERKKKLKIDKQSSPNVSL-----------LPTTTSRQERGFREGLPGKI 159

Query: 219 RAPAVFRCHRVTAISSGE-GELAYQATVNIGGHVFKGFLYDQGADDKNAFPSIS 272
            APAVF+  RVTAIS+ E  E+ YQATV I GH+FKGFL+  G D   AFP +S
Sbjct: 160 EAPAVFKRTRVTAISNNEQAEIGYQATVTISGHIFKGFLHYYGVDHNKAFPCLS 181

[Close]
BLAST of Cucsa.307920 vs. TAIR10
Match: AT3G51060.1 (AT3G51060.1 Lateral root primordium (LRP) protein-related)

HSP 1 Score: 141.4 bits (355), Expect = 8.9e-34
Identity = 83/191 (43.46%), Postives = 108/191 (56.54%), Query Frame = 1 

Query: 72  GESLIAGPGNNGSDEHVK-GDAGDGSMAV-CRDCGNRAKKECEYRRCRTCCKGRGNHCST 131
           GE+  AG G   +   ++ G +G GS  V C+DCGN+AKK+C + RCRTCCK RG  CST
Sbjct: 114 GETSTAGAGRAAAMMMIRSGGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECST 173

Query: 132 HVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAAS 191
           HV+STWVPAA+RRERQ  +      T    G S        KR R  +P+ S++      
Sbjct: 174 HVRSTWVPAAKRRERQQQLATVQPQTQLPRGESV------PKRHRENLPATSSSLVCTRI 233

Query: 192 TSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGG 251
            S+          S  +  +F    P  V + AVFRC RV+++  GE E AYQ  V+IGG
Sbjct: 234 PSH----------SGLEVGNF----PAEVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGG 284

Query: 252 HVFKGFLYDQG 261
           H+FKG LYD G
Sbjct: 294 HIFKGILYDLG 284

[Close]
BLAST of Cucsa.307920 vs. TAIR10
Match: AT5G66350.1 (AT5G66350.1 Lateral root primordium (LRP) protein-related)

HSP 1 Score: 137.9 bits (346), Expect = 9.8e-33
Identity = 87/206 (42.23%), Postives = 115/206 (55.83%), Query Frame = 1 

Query: 64  TQDFGFGKG---ESLIAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCC 123
           T   G G G    SLI   G  G+   ++  +G G  + C+DCGN++KK+C + RCRTCC
Sbjct: 84  TSAAGLGVGPSNRSLIETSG--GALMMMRSGSGSGGPS-CQDCGNQSKKDCSHMRCRTCC 143

Query: 124 KGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ 183
           K RG  C THVKSTWVPAA+RRERQ       ++T        GS     KR R  IP++
Sbjct: 144 KSRGLDCPTHVKSTWVPAAKRRERQ-----QQLSTGQQPQQLGGSV---PKRQRERIPAR 203

Query: 184 SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELA 243
           S + A     SN         TS  +  +F    P  V + AVFRC RV+++   E E A
Sbjct: 204 STSMAYTRIPSN--------NTSGLEVGNF----PPEVSSSAVFRCVRVSSVDDEEEEYA 263

Query: 244 YQATVNIGGHVFKGFLYDQGADDKNA 267
           Y+  V+IGGHVFKG LYDQG  ++++
Sbjct: 264 YKTAVSIGGHVFKGVLYDQGPAERSS 266

[Close]
BLAST of Cucsa.307920 vs. NCBI nr
Match: gi|449449461|ref|XP_004142483.1| (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus])

HSP 1 Score: 585.9 bits (1509), Expect = 3.9e-164
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 1 

Query: 1   TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDN 60
           TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDN
Sbjct: 21  TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDN 80

Query: 61  LKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCC 120
           LKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCC
Sbjct: 81  LKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCC 140

Query: 121 KGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ 180
           KGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
Sbjct: 141 KGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ 200

Query: 181 SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELA 240
           SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELA
Sbjct: 201 SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELA 260

Query: 241 YQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNHHRE 284
           YQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNHHRE
Sbjct: 261 YQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNHHRE 303

[Close]
BLAST of Cucsa.307920 vs. NCBI nr
Match: gi|659092229|ref|XP_008446964.1| (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo])

HSP 1 Score: 584.3 bits (1505), Expect = 1.1e-163
Identity = 282/283 (99.65%), Postives = 282/283 (99.65%), Query Frame = 1 

Query: 1   TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDN 60
           TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDN
Sbjct: 21  TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDN 80

Query: 61  LKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCC 120
           LKRTQDFGFGKGESLI GPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCC
Sbjct: 81  LKRTQDFGFGKGESLIGGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCC 140

Query: 121 KGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ 180
           KGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
Sbjct: 141 KGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ 200

Query: 181 SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELA 240
           SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELA
Sbjct: 201 SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELA 260

Query: 241 YQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNHHRE 284
           YQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNHHRE
Sbjct: 261 YQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNHHRE 303

[Close]
BLAST of Cucsa.307920 vs. NCBI nr
Match: gi|1009119153|ref|XP_015876225.1| (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 [Ziziphus jujuba])

HSP 1 Score: 302.8 bits (774), Expect = 6.5e-79
Identity = 158/302 (52.32%), Postives = 198/302 (65.56%), Query Frame = 1 

Query: 8   HHPSLPLPSSTALGVSVGIFPLLAATPCL------PPSQPPPNNHTPDDVTDRTRTFDNL 67
           H  ++PLPSST+LGV +GIFPLL ATPC+      PP QP PN + P         + +L
Sbjct: 32  HQTNIPLPSSTSLGVGLGIFPLLTATPCVTTPPPPPPPQPNPNINHPSSCNPDAYHYWSL 91

Query: 68  KRTQDFGFGKGES------LIAGPGNNGSDEHV------------KGDAGDGSMAVCRDC 127
           K+ Q+    K +       L+ GP NNG  +                + G+ S   C+DC
Sbjct: 92  KKFQELNSSKQDDHHHQNQLLLGPNNNGDGDGYDHEREEEAQMVESDEGGNTSSRACKDC 151

Query: 128 GNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSS 187
           GNRAKK+C ++RCRTCCK RG  CSTHV+STWVPA+RRRER  ++V+ G +   G GG  
Sbjct: 152 GNRAKKDCGFKRCRTCCKARGFDCSTHVRSTWVPASRRRERHEMMVL-GSSAGGGAGGGD 211

Query: 188 GSS--SAGAKRPRVLIPSQSAAAAAA-ASTSNATTPRSFETTSSHQDASFKKSLPGHVRA 247
           GSS  S+G KRPR+L+PSQ    + + ASTSN  TPRSF+   +HQDASFK+SLPG VR+
Sbjct: 212 GSSGSSSGVKRPRILVPSQIGNNSGSHASTSNVNTPRSFDFGYAHQDASFKQSLPGKVRS 271

Query: 248 PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDSGNH 283
            AVFRCHRVTAIS+GE ELAYQATV I GHVF+G+LYD G D+K+AFP IS LHL+    
Sbjct: 272 SAVFRCHRVTAISNGEAELAYQATVRISGHVFRGYLYDHGVDEKSAFPCISALHLEGSTS 331

[Close]
BLAST of Cucsa.307920 vs. NCBI nr
Match: gi|702425744|ref|XP_010067729.1| (PREDICTED: LOW QUALITY PROTEIN: protein LATERAL ROOT PRIMORDIUM 1 [Eucalyptus grandis])

HSP 1 Score: 280.0 bits (715), Expect = 4.5e-72
Identity = 151/277 (54.51%), Postives = 179/277 (64.62%), Query Frame = 1 

Query: 8   HHPSLPLPSSTALGVSVGIFPLLAATP---CLPPSQPPPNNHTPDDVTD----RTRTFDN 67
           HHP+  LPSSTALGV V IFPLL A P         P  NN++  + T     R     +
Sbjct: 49  HHPNFHLPSSTALGVGVSIFPLLTAAPYNVVEDCGNPNANNNSEANGTANFWRRCEVQSS 108

Query: 68  LKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCC 127
             +    G G+ ES      N G      G     ++ VC+DCGNRAKKEC YRRCRTCC
Sbjct: 109 FSKKDALGVGEDES------NKGEKPEEIGGLSSSNLRVCKDCGNRAKKECSYRRCRTCC 168

Query: 128 KGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGA---KRPRVLI 187
           K RG  CSTHV+STWVPAARRRERQM ++  G    +G GG  G++  G    + P+++ 
Sbjct: 169 KSRGYDCSTHVRSTWVPAARRRERQMAMMGIGFGAGAGGGGEGGAAGGGGGSXRDPKLVD 228

Query: 188 PSQSAAAAAAASTSNATTPRSFETTS-SHQDASFKKSLPGHVRAPAVFRCHRVTAISSGE 247
            S +  A  A+STSNATTPRSF+T+S  HQDASFK+SLPG VRAPAVFRC RVTAIS   
Sbjct: 229 GSSNHGATNASSTSNATTPRSFDTSSCHHQDASFKQSLPGQVRAPAVFRCIRVTAISDNA 288

Query: 248 GELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHL 274
            E AYQATV+I GHVF+GFLYDQG D+KNAFP IS L
Sbjct: 289 AEFAYQATVSISGHVFRGFLYDQGLDEKNAFPCISEL 319

[Close]
BLAST of Cucsa.307920 vs. NCBI nr
Match: gi|920699201|gb|KOM42426.1| (hypothetical protein LR48_Vigan05g003000 [Vigna angularis])

HSP 1 Score: 269.2 bits (687), Expect = 8.0e-69
Identity = 156/293 (53.24%), Postives = 186/293 (63.48%), Query Frame = 1 

Query: 2   QIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPD------DVTDRT 61
           Q IS +  P+LPLPSS AL V  GIFPLL ATPC+P   P   N   D        T  T
Sbjct: 22  QPISENQTPNLPLPSSAALSVGFGIFPLLTATPCVP--HPHQTNEIQDCGAAAGGNTTTT 81

Query: 62  RTFDNLKRTQDFGFGKGESLIAGPGNNGSDE---HVKG--DAGDGSM-----AVCRDCGN 121
             + NLK   +    K   +     +   DE   H KG  ++ +  +      VC+DCGN
Sbjct: 82  TNYWNLKMCPEVNPPKKGVINMDDDDEEDDERHHHHKGMMESEENGIYGPDFRVCQDCGN 141

Query: 122 RAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGS 181
           RAKK+C +RRCRTCCKGRG  CSTHVKSTWVP+ RRRER+M+V     A A G GG    
Sbjct: 142 RAKKDCIFRRCRTCCKGRGYDCSTHVKSTWVPSIRRREREMVV-----APAGGVGG---- 201

Query: 182 SSAGAKRPRVLI-PSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVF 241
              G+KRPR ++  SQ+A A + +S SNATTP+S  T SSHQDASFK+SLPGHVRAPAVF
Sbjct: 202 ---GSKRPRAIVGSSQNATATSHSSNSNATTPKSLATISSHQDASFKQSLPGHVRAPAVF 261

Query: 242 RCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK--NAFPSISHLHL 276
           +CHRV+AI +GE E AY ATV+I GHVFKGFLYD G D K  NA P +S L L
Sbjct: 262 KCHRVSAIGNGEDEFAYLATVHISGHVFKGFLYDHGVDGKIANAVPCVSELQL 300

The following BLAST results are available for this feature:
BLAST of Cucsa.307920 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LRP1_ARATH1.2e-5645.99Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana GN=LRP1 PE=1 SV=1[more]
SRS2_ARATH1.2e-3548.78Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=SRS2 PE=2 SV=1[more]
SRS6_ARATH2.9e-3444.83Protein SHI RELATED SEQUENCE 6 OS=Arabidopsis thaliana GN=SRS6 PE=2 SV=1[more]
SRS1_ARATH1.6e-3243.46Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana GN=SRS1 PE=1 SV=2[more]
SHI_ARATH1.7e-3142.23Protein SHORT INTERNODES OS=Arabidopsis thaliana GN=SHI PE=1 SV=1[more]
BLAST of Cucsa.307920 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KWX6_CUCSA2.7e-164100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G623840 PE=4 SV=1[more]
A0A0S3SKJ2_PHAAN5.6e-6953.24Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G233000 PE=... [more]
A0A0L9UIA1_PHAAN5.6e-6953.24Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan05g003000 PE=4 SV=1[more]
A0A0D2Q8N8_GOSRA6.1e-6851.01Uncharacterized protein OS=Gossypium raimondii GN=B456_006G123900 PE=4 SV=1[more]
G7J0K6_MEDTR1.0e-6750.36LRP1 carboxy-terminal domain protein OS=Medicago truncatula GN=MTR_3g014660 PE=4... [more]
BLAST of Cucsa.307920 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G12330.46.7e-5845.99 Lateral root primordium (LRP) protein-related[more]
AT4G36260.16.6e-3748.78 Lateral root primordium (LRP) protein-related[more]
AT3G54430.11.6e-3544.83 SHI-related sequence 6[more]
AT3G51060.18.9e-3443.46 Lateral root primordium (LRP) protein-related[more]
AT5G66350.19.8e-3342.23 Lateral root primordium (LRP) protein-related[more]
BLAST of Cucsa.307920 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449449461|ref|XP_004142483.1|3.9e-164100.00PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus][more]
gi|659092229|ref|XP_008446964.1|1.1e-16399.65PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo][more]
gi|1009119153|ref|XP_015876225.1|6.5e-7952.32PREDICTED: protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 [Ziziphus jujuba][more]
gi|702425744|ref|XP_010067729.1|4.5e-7254.51PREDICTED: LOW QUALITY PROTEIN: protein LATERAL ROOT PRIMORDIUM 1 [Eucalyptus gr... [more]
gi|920699201|gb|KOM42426.1|8.0e-6953.24hypothetical protein LR48_Vigan05g003000 [Vigna angularis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006510Znf_LRP1
IPR006511SHI_C
IPR007818SHI
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.307920.1Cucsa.307920.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006510Zinc finger, lateral root primordium type 1TIGRFAMsTIGR01623TIGR01623coord: 99..141
score: 1.2
IPR006511Lateral Root Primordium type 1, C-terminalTIGRFAMsTIGR01624TIGR01624coord: 214..260
score: 3.1
IPR007818Protein of unknown function DUF702PFAMPF05142DUF702coord: 98..262
score: 7.9
NoneNo IPR availablePANTHERPTHR31604FAMILY NOT NAMEDcoord: 1..279
score: 1.2E
NoneNo IPR availablePANTHERPTHR31604:SF2PROTEIN SHI RELATED SEQUENCE 6coord: 1..279
score: 1.2E