Carg14408 (gene) Silver-seed gourd

Overview
NameCarg14408
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionprotein LATERAL ROOT PRIMORDIUM 1
LocationCucurbita_argyrosperma_scaffold_041 : 71915 .. 72997 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGGTCTCAGAGATGTTCTGTTTTTAGCTCCGACGTCTACTTCCGATCATCATTCTTCTCTTCCTCTCCACTCCCCCGCCGCTCTTGGTGTCAGCGTTGGCATATTTCCACTTTTAGCGGCAACCCCATCTCTCCCGCCTCCTCCTCAGCCGCCGCCTAATCAGACGGCTGAGGAAGTTAGTGATCGTACTCGGAGTTTGGAGAATCTGAAGAAAACCCATGATTTTGGGTTTGGGAAAGGGGATTCGTTTATTGCCGGCGACAAAGGCGACGCCGGCGAGAGCTCCATGGCGGTTTGTAGGGACTGTGGAAACAGAGCTAAAAAAGAGTGTGAGTATCGGAGGTGCAGGACTTGTTGTAAAGGACGTGGGAATCATTGCTCTACTCATGTGAAGAGTACTTGGGTTCCGGCGTCTCGCCGCCGTGAACGTCAGATGTTGGTGGTGATGGACGGCGTTGCCACTGCTAGTGGCGACGGTGGTTCTTCTGGTTCTTCGTCTGCTGGTGCTAAAAGACCCAGAGTTTTGATTCCTTCGCAGAGTACTCCCGCCGCCGCCTCTCACGCTTCTGCCTCCATTGCCACCACCTCCAGGAGCTTTGAAACAACCTCCAACCATCAAGGTGGTTCTCTCTGTTTCTCTCTGTTTTCCTCTGTTTCTCTCTGATTCTCTCTGTTTCTCTCTGTTTCTCTGTGTGTAATGATTTGTTTATCTGTTCTTGAGAAAACCCAACAATCTTTTCATATTTCACTCTGTTTTCCTCATGATCTTGAATTCAGTAGATTCAAATTGTTCATCTTTAAATCTGCTCTGTTTCTGGAACTCTGATGGCTTTTGACAACAGATGCAAGCTTCAAGAAGTCGCTACCGGGGCAAGTTCGTGCCCCGGCGGTGTTCCGGTACCATAGAGTGACAGCCATTAGCAGTGGTGAAGGAGAGTTAGCATACCAAGCAACAGTCAACATTGGTGGCCATGTCTTCAAAGGCTTTCTGTATGATCAAGGAGTTGTTGATCACAAAAATGGATACCCATCTCTTTCACATCTCCATTTGGAAAGTGGTAGCCATCACAGGGAATAG

mRNA sequence

ATGTTGGGTCTCAGAGATGTTCTGTTTTTAGCTCCGACGTCTACTTCCGATCATCATTCTTCTCTTCCTCTCCACTCCCCCGCCGCTCTTGGTGTCAGCGTTGGCATATTTCCACTTTTAGCGGCAACCCCATCTCTCCCGCCTCCTCCTCAGCCGCCGCCTAATCAGACGGCTGAGGAAGTTAGTGATCGTACTCGGAGTTTGGAGAATCTGAAGAAAACCCATGATTTTGGGTTTGGGAAAGGGGATTCGTTTATTGCCGGCGACAAAGGCGACGCCGGCGAGAGCTCCATGGCGGTTTGTAGGGACTGTGGAAACAGAGCTAAAAAAGAGTGTGAGTATCGGAGGTGCAGGACTTGTTGTAAAGGACGTGGGAATCATTGCTCTACTCATGTGAAGAGTACTTGGGTTCCGGCGTCTCGCCGCCGTGAACGTCAGATGTTGGTGGTGATGGACGGCGTTGCCACTGCTAGTGGCGACGGTGGTTCTTCTGGTTCTTCGTCTGCTGGTGCTAAAAGACCCAGAGTTTTGATTCCTTCGCAGAGTACTCCCGCCGCCGCCTCTCACGCTTCTGCCTCCATTGCCACCACCTCCAGGAGCTTTGAAACAACCTCCAACCATCAAGATGCAAGCTTCAAGAAGTCGCTACCGGGGCAAGTTCGTGCCCCGGCGGTGTTCCGGTACCATAGAGTGACAGCCATTAGCAGTGGTGAAGGAGAGTTAGCATACCAAGCAACAGTCAACATTGGTGGCCATGTCTTCAAAGGCTTTCTGTATGATCAAGGAGTTGTTGATCACAAAAATGGATACCCATCTCTTTCACATCTCCATTTGGAAAGTGGTAGCCATCACAGGGAATAG

Coding sequence (CDS)

ATGTTGGGTCTCAGAGATGTTCTGTTTTTAGCTCCGACGTCTACTTCCGATCATCATTCTTCTCTTCCTCTCCACTCCCCCGCCGCTCTTGGTGTCAGCGTTGGCATATTTCCACTTTTAGCGGCAACCCCATCTCTCCCGCCTCCTCCTCAGCCGCCGCCTAATCAGACGGCTGAGGAAGTTAGTGATCGTACTCGGAGTTTGGAGAATCTGAAGAAAACCCATGATTTTGGGTTTGGGAAAGGGGATTCGTTTATTGCCGGCGACAAAGGCGACGCCGGCGAGAGCTCCATGGCGGTTTGTAGGGACTGTGGAAACAGAGCTAAAAAAGAGTGTGAGTATCGGAGGTGCAGGACTTGTTGTAAAGGACGTGGGAATCATTGCTCTACTCATGTGAAGAGTACTTGGGTTCCGGCGTCTCGCCGCCGTGAACGTCAGATGTTGGTGGTGATGGACGGCGTTGCCACTGCTAGTGGCGACGGTGGTTCTTCTGGTTCTTCGTCTGCTGGTGCTAAAAGACCCAGAGTTTTGATTCCTTCGCAGAGTACTCCCGCCGCCGCCTCTCACGCTTCTGCCTCCATTGCCACCACCTCCAGGAGCTTTGAAACAACCTCCAACCATCAAGATGCAAGCTTCAAGAAGTCGCTACCGGGGCAAGTTCGTGCCCCGGCGGTGTTCCGGTACCATAGAGTGACAGCCATTAGCAGTGGTGAAGGAGAGTTAGCATACCAAGCAACAGTCAACATTGGTGGCCATGTCTTCAAAGGCTTTCTGTATGATCAAGGAGTTGTTGATCACAAAAATGGATACCCATCTCTTTCACATCTCCATTTGGAAAGTGGTAGCCATCACAGGGAATAG

Protein sequence

MLGLRDVLFLAPTSTSDHHSSLPLHSPAALGVSVGIFPLLAATPSLPPPPQPPPNQTAEEVSDRTRSLENLKKTHDFGFGKGDSFIAGDKGDAGESSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTPAAASHASASIATTSRSFETTSNHQDASFKKSLPGQVRAPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESGSHHRE
Homology
[Close]
BLAST of Carg14408 vs. NCBI nr
Match: XP_022945608.1 (protein SHI RELATED SEQUENCE 6-like [Cucurbita moschata])

HSP 1 Score: 466.8 bits (1200), Expect = 5.1e-128
Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0 

Query: 1   MLGLRDVLFLAPTSTSDHHSSLPLHSPAALGVSVGIFPLLAATPSLXXXXXXXXXXXAEE 60
           MLGLRDVLFLAPTSTSDHHSSLPLHSPAALGVSVGIFPLLAATPSLXXXXXXXXXXXAEE
Sbjct: 1   MLGLRDVLFLAPTSTSDHHSSLPLHSPAALGVSVGIFPLLAATPSLXXXXXXXXXXXAEE 60

Query: 61  VSDRTRSLENLKKTHDFGFGKGDSFIAGDKGDAGESSMAVCRDCGNRAKKECEYRRCRTC 120
           VSDRTRSLENLKKTHDFGFGKGDSFIAGDKGDAGESSMAVCRDCGNRAKKECEYRRCRTC
Sbjct: 61  VSDRTRSLENLKKTHDFGFGKGDSFIAGDKGDAGESSMAVCRDCGNRAKKECEYRRCRTC 120

Query: 121 CKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVAXXXXXXXXXXXXXXXXXXXXVLIPS 180
           CKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVAXXXXXXXXXXXXXXXXXXXXVLIPS
Sbjct: 121 CKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVAXXXXXXXXXXXXXXXXXXXXVLIPS 180

Query: 181 XXXXXXXXXXXXXXXTTSRSFETTSNHQDASFKKSLPGQVRAPAVFRYHRVTAISSGEGE 240
           XXXXXXXXXXXXXXXTTSRSFETTSNHQDASFKKSLPGQVRAPAVFRYHRVTAISSGEGE
Sbjct: 181 XXXXXXXXXXXXXXXTTSRSFETTSNHQDASFKKSLPGQVRAPAVFRYHRVTAISSGEGE 240

Query: 241 LAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESGSHHRE 287
           LAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESGSHHRE
Sbjct: 241 LAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESGSHHRE 286

[Close]
BLAST of Carg14408 vs. NCBI nr
Match: XP_023541249.1 (protein SHI RELATED SEQUENCE 6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 409.5 bits (1051), Expect = 9.7e-111
Identity = 258/287 (89.90%), Postives = 258/287 (89.90%), Query Frame = 0 

Query: 1   MLGLRDVLFLAPTSTSDHHSSLPLHSPAALGVSVGIFPLLAATPSLXXXXXXXXXXXAEE 60
           MLGLRDVLFLAPTSTSDHH SLPLHSPAALGVSVGIFPLLAATPSL   XXXXX   AEE
Sbjct: 1   MLGLRDVLFLAPTSTSDHHPSLPLHSPAALGVSVGIFPLLAATPSL-PPXXXXXNQTAEE 60

Query: 61  VSDRTRSLENLKKTHDFGFGKGDSFIAGDKGDAGESSMAVCRDCGNRAKKECEYRRCRTC 120
           VSDRTRSLENLKKTHDFGFGKGDSFIAGDKGDAGESSMAVCRDCGNRAKKECEYRRCRTC
Sbjct: 61  VSDRTRSLENLKKTHDFGFGKGDSFIAGDKGDAGESSMAVCRDCGNRAKKECEYRRCRTC 120

Query: 121 CKGRGNHCSTHVKSTWVPASR-RRERQMLVVMDGVAXXXXXXXXXXXXXXXXXXXXVLIP 180
           CKGRGNHCSTHVKSTWVPASR               XXXXXXXXXXXXXXXXXXXX    
Sbjct: 121 CKGRGNHCSTHVKSTWVPASRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 SXXXXXXXXXXXXXXXTTSRSFETTSNHQDASFKKSLPGQVRAPAVFRYHRVTAISSGEG 240
            XXXXXXXXXXXXXXX  SRSFETTSNHQDASFKKSLPGQVRAPAVFRYHRVTAISSGEG
Sbjct: 181 XXXXXXXXXXXXXXXXXXSRSFETTSNHQDASFKKSLPGQVRAPAVFRYHRVTAISSGEG 240

Query: 241 ELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESGSHHRE 287
           ELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESGSHHRE
Sbjct: 241 ELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESGSHHRE 286

[Close]
BLAST of Carg14408 vs. NCBI nr
Match: XP_022967015.1 (protein SHI RELATED SEQUENCE 6-like [Cucurbita maxima])

HSP 1 Score: 396.0 bits (1016), Expect = 1.1e-106
Identity = 257/288 (89.24%), Postives = 258/288 (89.58%), Query Frame = 0 

Query: 1   MLGLRDVLFLAPTSTSDHHSSLPLHSPAALGVSVGIFPLLAATP-SLXXXXXXXXXXXAE 60
           MLGLRDVLFLAPTSTSDHH SLPLHSPAALGVSVGIFPLLAATP   XXXXXXXXXXX  
Sbjct: 1   MLGLRDVLFLAPTSTSDHHPSLPLHSPAALGVSVGIFPLLAATPXXXXXXXXXXXXXXXX 60

Query: 61  EVSDRTRSLENLKKTHDFGFGKGDSFIAGDKGDAGESSMAVCRDCGNRAKKECEYRRCRT 120
           EVSDRTRS ENLK+THDFGFGKGDSFIAGDKGDAGESSMAVCRDCGNRAKKECEYRRCRT
Sbjct: 61  EVSDRTRSSENLKRTHDFGFGKGDSFIAGDKGDAGESSMAVCRDCGNRAKKECEYRRCRT 120

Query: 121 CCKGRGNHCSTHVKSTWVPASR-RRERQMLVVMDGVAXXXXXXXXXXXXXXXXXXXXVLI 180
           CCKGRGNHCSTHVKSTWVPASR               XXXXXXXXXXXXXXXXXXXX   
Sbjct: 121 CCKGRGNHCSTHVKSTWVPASRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 PSXXXXXXXXXXXXXXXTTSRSFETTSNHQDASFKKSLPGQVRAPAVFRYHRVTAISSGE 240
             XXXXXXXXXXXXXXX  SRSFETTSNHQDASFKKSLPGQVR PAVFRYHRVTAISSGE
Sbjct: 181 XXXXXXXXXXXXXXXXXXXSRSFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAISSGE 240

Query: 241 GELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESGSHHRE 287
           GELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESGSHHRE
Sbjct: 241 GELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESGSHHRE 288

[Close]
BLAST of Carg14408 vs. NCBI nr
Match: XP_004142483.1 (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus] >KGN52321.1 hypothetical protein Csa_5G623840 [Cucumis sativus])

HSP 1 Score: 329.3 bits (843), Expect = 1.3e-86
Identity = 218/305 (71.48%), Postives = 233/305 (76.39%), Query Frame = 0 

Query: 1   MLGLRDVLFLAPTS----------TSDHHSSLPLHSPAALGVSVGIFPLLAATPSLXXXX 60
           MLGLRDVLF+APT           +SDHH SLPL S  ALGVSVGIFPLLAATP L    
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  XXXXXXXAEEVSDRTRSLENLKKTHDFGFGKGDSFIAGD---------KGDAGESSMAVC 120
                   ++V+DRTR+ +NLK+T DFGFGKG+S IAG          KGDAG+ SMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVAXXXXXX 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPA                XXXXXX
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPA-XXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXVLIPSXXXXXXXXXXXXXXXTTSRSFETTSNHQDASFKKSLPGQVR 240
           XXXXXXXXXXXXXX     XXXXXXXXXXXXXXX   RSFETTS+HQDASFKKSLPG VR
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSFETTSSHQDASFKKSLPGHVR 240

Query: 241 APAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESG 287
           APAVFR HRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG  D KN +PS+SHLHL+SG
Sbjct: 241 APAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG-ADDKNAFPSISHLHLDSG 300

[Close]
BLAST of Carg14408 vs. NCBI nr
Match: XP_008446964.1 (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo])

HSP 1 Score: 327.8 bits (839), Expect = 3.7e-86
Identity = 217/305 (71.15%), Postives = 232/305 (76.07%), Query Frame = 0 

Query: 1   MLGLRDVLFLAPTS----------TSDHHSSLPLHSPAALGVSVGIFPLLAATPSLXXXX 60
           MLGLRDVLF+APT           +SDHH SLPL S  ALGVSVGIFPLLAATP L    
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  XXXXXXXAEEVSDRTRSLENLKKTHDFGFGKGDSFIAGD---------KGDAGESSMAVC 120
                   ++V+DRTR+ +NLK+T DFGFGKG+S I G          KGDAG+ SMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIGGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVAXXXXXX 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPA                XXXXXX
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPA-XXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXVLIPSXXXXXXXXXXXXXXXTTSRSFETTSNHQDASFKKSLPGQVR 240
           XXXXXXXXXXXXXX     XXXXXXXXXXXXXXX   RSFETTS+HQDASFKKSLPG VR
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSFETTSSHQDASFKKSLPGHVR 240

Query: 241 APAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESG 287
           APAVFR HRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG  D KN +PS+SHLHL+SG
Sbjct: 241 APAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG-ADDKNAFPSISHLHLDSG 300

[Close]
BLAST of Carg14408 vs. TAIR10
Match: AT5G12330.4 (Lateral root primordium (LRP) protein-related)

HSP 1 Score: 137.5 bits (345), Expect = 1.3e-32
Identity = 104/184 (56.52%), Postives = 123/184 (66.85%), Query Frame = 0 

Query: 101 CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVAXXXXX 160
           C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV A+RRRERQ++            
Sbjct: 199 CQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVM----PTGANPTA 258

Query: 161 XXXXXXXXXXXXXXXVLIPSXXXXXXXXXXXXXXXTTSRSFETTSNHQDASFKKSLPGQV 220
                XXXXXXXXXX     XXXXXXXXXXXXXXX                 +++ PGQV
Sbjct: 259 GSSLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREAWPGQV 318

Query: 221 RAPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLES 280
           RA AVF+  RVTA+  G+ E AYQA V IGGHVFKGFLYDQG ++ K G+PS+S LHL  
Sbjct: 319 RAAAVFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFLYDQG-LEPKEGFPSMSDLHLGG 377

Query: 281 GSHH 285
            +++
Sbjct: 379 SANN 377

[Close]
BLAST of Carg14408 vs. TAIR10
Match: AT3G54430.1 (SHI-related sequence 6)

HSP 1 Score: 131.7 bits (330), Expect = 7.1e-31
Identity = 81/193 (41.97%), Postives = 103/193 (53.37%), Query Frame = 0 

Query: 89  DKGDAGESSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRR----- 148
           D    GE    VCRDCGNRAKKEC + RCRTCCK RG +C THVKSTW+P+S  R     
Sbjct: 32  DNNTVGEK---VCRDCGNRAKKECLFERCRTCCKSRGYNCVTHVKSTWIPSSATRSSSSP 91

Query: 149 -ERQMLVVMDGVAXXXXXXXXXXXXXXXXXXXXVLIPSXXXXXXXXXXXXXXXTTSRSFE 208
            ER+  + +D  +                     L+P                       
Sbjct: 92  SERKKKLKIDKQSSPNVS----------------LLP----------------------- 151

Query: 209 TTSNHQDASFKKSLPGQVRAPAVFRYHRVTAISSGE-GELAYQATVNIGGHVFKGFLYDQ 268
           TT++ Q+  F++ LPG++ APAVF+  RVTAIS+ E  E+ YQATV I GH+FKGFL+  
Sbjct: 152 TTTSRQERGFREGLPGKIEAPAVFKRTRVTAISNNEQAEIGYQATVTISGHIFKGFLHYY 181

Query: 269 GVVDHKNGYPSLS 275
           G VDH   +P LS
Sbjct: 212 G-VDHNKAFPCLS 181

[Close]
BLAST of Carg14408 vs. TAIR10
Match: AT1G75520.1 (SHI-related sequence 5)

HSP 1 Score: 116.7 bits (291), Expect = 2.4e-26
Identity = 92/175 (52.57%), Postives = 111/175 (63.43%), Query Frame = 0 

Query: 101 CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVAXXXXX 160
           C+DCGN+AKK+C + RCRTCCK RG HC THVKSTWVPA++RRER     +  +A     
Sbjct: 125 CQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRER-----LAQLASLQHH 184

Query: 161 XXXXXXXXXXXXXXXVLIPSXXXXXXXXXXXXXXXTTSRSFETTSNHQDASFKKSLPGQV 220
                XXXXXXXXXX     XXXXXXXXXXXXXX   +R     SN       + LP +V
Sbjct: 185 SASSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANTRVVNANSN-SGLEVSQHLPPEV 244

Query: 221 RAPAVFRYHRVTAISSGEGE--LAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSL 274
            +PA+FR  RV++I   E +   AYQ  VNIGGH+FKG LYDQG     N + +L
Sbjct: 245 NSPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEHQDNHHLNL 293

[Close]
BLAST of Carg14408 vs. TAIR10
Match: AT3G51060.1 (Lateral root primordium (LRP) protein-related)

HSP 1 Score: 114.4 bits (285), Expect = 1.2e-25
Identity = 63/162 (38.89%), Postives = 83/162 (51.23%), Query Frame = 0 

Query: 101 CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVAXXXXX 160
           C+DCGN+AKK+C + RCRTCCK RG  CSTHV+STWVPA++RRERQ  +           
Sbjct: 144 CQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPAAKRRERQQQLA---------- 203

Query: 161 XXXXXXXXXXXXXXXVLIPSXXXXXXXXXXXXXXXTTSRSFETTSNHQDASFKKSLPGQV 220
                            +P                ++S       +H       + P +V
Sbjct: 204 ----------TVQPQTQLPRGESVPKRHRENLPATSSSLVCTRIPSHSGLEV-GNFPAEV 263

Query: 221 RAPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG 263
            + AVFR  RV+++  GE E AYQ  V+IGGH+FKG LYD G
Sbjct: 264 SSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLG 284

[Close]
BLAST of Carg14408 vs. TAIR10
Match: AT1G19790.1 (SHI-related sequence 7)

HSP 1 Score: 113.6 bits (283), Expect = 2.0e-25
Identity = 92/183 (50.27%), Postives = 109/183 (59.56%), Query Frame = 0 

Query: 101 CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQ-MLVVMDGVAXXXX 160
           C+DCGN+AKK+C + RCRTCCK RG  C THVKSTWV A++RRERQ  L V+   A    
Sbjct: 119 CQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQAQLAVLP--AKRIR 178

Query: 161 XXXXXXXXXXXXXXXXVLIPSXXXXXXXXXXXXXXXTTSRSFETTSNHQDASFKKSLPGQ 220
                XXXXXXXXXXX     XXXXXXXXX       +S   ET+           LP +
Sbjct: 179 DANSRXXXXXXXXXXXXXXXXXXXXXXXXXCTRVVNASSSGLETS----------HLPPE 238

Query: 221 VRAPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPS-----LS 278
           + +PAVFR  RV++I   + E AYQ  V+IGGHVFKG LYDQG     + Y S      S
Sbjct: 239 ISSPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDHHRYSSSLNGETS 289

[Close]
BLAST of Carg14408 vs. Swiss-Prot
Match: sp|Q94CK9|LRP1_ARATH (Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana OX=3702 GN=LRP1 PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 6.8e-31
Identity = 126/296 (42.57%), Postives = 152/296 (51.35%), Query Frame = 0 

Query: 1   MLGLRDVLFLAPT---------STSDHHSSLPLHSPAALGVSVGIFPLL-AATPSLXXXX 60
           M+GLRDV  +AP          S SDH +S   ++     + VG+ PLL A TP      
Sbjct: 3   MVGLRDVFLVAPAYHHQNAGVISGSDHMNS---NAAXXXALGVGVIPLLTAGTPQQNVED 62

Query: 61  XXXXXXXAEEVSDRTRSLENLKKTH--DFGFGKGDSFIAGDKGDAGESSMAVCRDCGNRA 120
                                   H                           C+DCGN+A
Sbjct: 63  SDINFLGNNRRWQXXXXXXXXXXLHFKSTXXXXXXXXXXXXXXXXXXXXXXXCQDCGNQA 122

Query: 121 KKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVAXXXXXXXXXXXXX 180
           KKEC+ RRCRTCCK RG  CSTHVKSTWV A+RRRERQ++                 XXX
Sbjct: 123 KKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVM----PTGANPTAGSSLSXXX 182

Query: 181 XXXXXXXVLIPSXXXXXXXXXXXXXXXTTSRSFETTSNHQDASFKKSLPGQVRAPAVFRY 240
           XXXXXXX     XXXXXXXXXXXXXXX                 +++ PGQVRA AVF+ 
Sbjct: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREAWPGQVRAAAVFKC 242

Query: 241 HRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESGSHH 285
            RVTA+  G+ E AYQA V IGGHVFKGFLYDQG ++ K G+PS+S LHL   +++
Sbjct: 243 VRVTAVEDGDDEYAYQAVVKIGGHVFKGFLYDQG-LEPKEGFPSMSDLHLGGSANN 290

[Close]
BLAST of Carg14408 vs. Swiss-Prot
Match: sp|Q9M2U4|SRS6_ARATH (Protein SHI RELATED SEQUENCE 6 OS=Arabidopsis thaliana OX=3702 GN=SRS6 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.3e-29
Identity = 81/193 (41.97%), Postives = 103/193 (53.37%), Query Frame = 0 

Query: 89  DKGDAGESSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRR----- 148
           D    GE    VCRDCGNRAKKEC + RCRTCCK RG +C THVKSTW+P+S  R     
Sbjct: 32  DNNTVGEK---VCRDCGNRAKKECLFERCRTCCKSRGYNCVTHVKSTWIPSSATRSSSSP 91

Query: 149 -ERQMLVVMDGVAXXXXXXXXXXXXXXXXXXXXVLIPSXXXXXXXXXXXXXXXTTSRSFE 208
            ER+  + +D  +                     L+P                       
Sbjct: 92  SERKKKLKIDKQSSPNVS----------------LLP----------------------- 151

Query: 209 TTSNHQDASFKKSLPGQVRAPAVFRYHRVTAISSGE-GELAYQATVNIGGHVFKGFLYDQ 268
           TT++ Q+  F++ LPG++ APAVF+  RVTAIS+ E  E+ YQATV I GH+FKGFL+  
Sbjct: 152 TTTSRQERGFREGLPGKIEAPAVFKRTRVTAISNNEQAEIGYQATVTISGHIFKGFLHYY 181

Query: 269 GVVDHKNGYPSLS 275
           G VDH   +P LS
Sbjct: 212 G-VDHNKAFPCLS 181

[Close]
BLAST of Carg14408 vs. Swiss-Prot
Match: sp|Q9LQZ5|SRS5_ARATH (Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 4.2e-25
Identity = 92/175 (52.57%), Postives = 111/175 (63.43%), Query Frame = 0 

Query: 101 CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVAXXXXX 160
           C+DCGN+AKK+C + RCRTCCK RG HC THVKSTWVPA++RRER     +  +A     
Sbjct: 125 CQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRER-----LAQLASLQHH 184

Query: 161 XXXXXXXXXXXXXXXVLIPSXXXXXXXXXXXXXXXTTSRSFETTSNHQDASFKKSLPGQV 220
                XXXXXXXXXX     XXXXXXXXXXXXXX   +R     SN       + LP +V
Sbjct: 185 SASSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANTRVVNANSN-SGLEVSQHLPPEV 244

Query: 221 RAPAVFRYHRVTAISSGEGE--LAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSL 274
            +PA+FR  RV++I   E +   AYQ  VNIGGH+FKG LYDQG     N + +L
Sbjct: 245 NSPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEHQDNHHLNL 293

[Close]
BLAST of Carg14408 vs. Swiss-Prot
Match: sp|Q9SD40|SRS1_ARATH (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2)

HSP 1 Score: 114.4 bits (285), Expect = 2.1e-24
Identity = 63/162 (38.89%), Postives = 83/162 (51.23%), Query Frame = 0 

Query: 101 CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVAXXXXX 160
           C+DCGN+AKK+C + RCRTCCK RG  CSTHV+STWVPA++RRERQ  +           
Sbjct: 144 CQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPAAKRRERQQQLA---------- 203

Query: 161 XXXXXXXXXXXXXXXVLIPSXXXXXXXXXXXXXXXTTSRSFETTSNHQDASFKKSLPGQV 220
                            +P                ++S       +H       + P +V
Sbjct: 204 ----------TVQPQTQLPRGESVPKRHRENLPATSSSLVCTRIPSHSGLEV-GNFPAEV 263

Query: 221 RAPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG 263
            + AVFR  RV+++  GE E AYQ  V+IGGH+FKG LYD G
Sbjct: 264 SSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLG 284

[Close]
BLAST of Carg14408 vs. Swiss-Prot
Match: sp|Q9FXH7|SRS7_ARATH (Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.6e-24
Identity = 92/183 (50.27%), Postives = 109/183 (59.56%), Query Frame = 0 

Query: 101 CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQ-MLVVMDGVAXXXX 160
           C+DCGN+AKK+C + RCRTCCK RG  C THVKSTWV A++RRERQ  L V+   A    
Sbjct: 119 CQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQAQLAVLP--AKRIR 178

Query: 161 XXXXXXXXXXXXXXXXVLIPSXXXXXXXXXXXXXXXTTSRSFETTSNHQDASFKKSLPGQ 220
                XXXXXXXXXXX     XXXXXXXXX       +S   ET+           LP +
Sbjct: 179 DANSRXXXXXXXXXXXXXXXXXXXXXXXXXCTRVVNASSSGLETS----------HLPPE 238

Query: 221 VRAPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPS-----LS 278
           + +PAVFR  RV++I   + E AYQ  V+IGGHVFKG LYDQG     + Y S      S
Sbjct: 239 ISSPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDHHRYSSSLNGETS 289

[Close]
BLAST of Carg14408 vs. TrEMBL
Match: tr|A0A0A0KWX6|A0A0A0KWX6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623840 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 8.4e-87
Identity = 218/305 (71.48%), Postives = 233/305 (76.39%), Query Frame = 0 

Query: 1   MLGLRDVLFLAPTS----------TSDHHSSLPLHSPAALGVSVGIFPLLAATPSLXXXX 60
           MLGLRDVLF+APT           +SDHH SLPL S  ALGVSVGIFPLLAATP L    
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  XXXXXXXAEEVSDRTRSLENLKKTHDFGFGKGDSFIAGD---------KGDAGESSMAVC 120
                   ++V+DRTR+ +NLK+T DFGFGKG+S IAG          KGDAG+ SMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVAXXXXXX 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPA                XXXXXX
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPA-XXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXVLIPSXXXXXXXXXXXXXXXTTSRSFETTSNHQDASFKKSLPGQVR 240
           XXXXXXXXXXXXXX     XXXXXXXXXXXXXXX   RSFETTS+HQDASFKKSLPG VR
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSFETTSSHQDASFKKSLPGHVR 240

Query: 241 APAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESG 287
           APAVFR HRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG  D KN +PS+SHLHL+SG
Sbjct: 241 APAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG-ADDKNAFPSISHLHLDSG 300

[Close]
BLAST of Carg14408 vs. TrEMBL
Match: tr|A0A1S3BFS5|A0A1S3BFS5_CUCME (protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo OX=3656 GN=LOC103489517 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 2.4e-86
Identity = 217/305 (71.15%), Postives = 232/305 (76.07%), Query Frame = 0 

Query: 1   MLGLRDVLFLAPTS----------TSDHHSSLPLHSPAALGVSVGIFPLLAATPSLXXXX 60
           MLGLRDVLF+APT           +SDHH SLPL S  ALGVSVGIFPLLAATP L    
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  XXXXXXXAEEVSDRTRSLENLKKTHDFGFGKGDSFIAGD---------KGDAGESSMAVC 120
                   ++V+DRTR+ +NLK+T DFGFGKG+S I G          KGDAG+ SMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIGGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVAXXXXXX 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPA                XXXXXX
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPA-XXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXVLIPSXXXXXXXXXXXXXXXTTSRSFETTSNHQDASFKKSLPGQVR 240
           XXXXXXXXXXXXXX     XXXXXXXXXXXXXXX   RSFETTS+HQDASFKKSLPG VR
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSFETTSSHQDASFKKSLPGHVR 240

Query: 241 APAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESG 287
           APAVFR HRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG  D KN +PS+SHLHL+SG
Sbjct: 241 APAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG-ADDKNAFPSISHLHLDSG 300

[Close]
BLAST of Carg14408 vs. TrEMBL
Match: tr|A0A2I4GZU2|A0A2I4GZU2_9ROSI (protein LATERAL ROOT PRIMORDIUM 1 OS=Juglans regia OX=51240 GN=LOC109012318 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 3.0e-60
Identity = 145/297 (48.82%), Postives = 177/297 (59.60%), Query Frame = 0 

Query: 1   MLGLRDVLFLAPTS---------TSDHHSSLPLHSPAALGVSVGIFPLLAATPSLXXXXX 60
           MLG+RD++ +APTS         +++HH +LPL S AALGV +GIFPLL ATP +     
Sbjct: 3   MLGIRDLVLIAPTSSMHQQNQPISAEHHPNLPLPSSAALGVGLGIFPLLTATPCITPSNN 62

Query: 61  XXXXXXAEEVSDRTRSLENLKKTHDF-GFGKGDSFIAGDKG----DAGESSMAVCRDCGN 120
                     +   R+   LKK  +     KG   +  D      ++  S M VCRDCGN
Sbjct: 63  GVQDCG----NSNNRNCWTLKKGQELSSSNKGGLDVENDASEQMFESSGSGMRVCRDCGN 122

Query: 121 RAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVV-MDGVAXXXXXXXXXX 180
           +AKK+C YRRCRTCCK RGN C+THV+STWVPA+RRR+R+M VV  DG A          
Sbjct: 123 KAKKDCTYRRCRTCCKSRGNDCATHVRSTWVPAARRRDRRMSVVGGDGDASSGSSSGVKR 182

Query: 181 XXXXXXXXXXVLIPSXXXXXXXXXXXXXXXTTSRSFETTSNHQDASFKKSLPGQVRAPAV 240
                      +  S               TT RS   +S+HQDASFK SLP QVRAPAV
Sbjct: 183 PR---------IEVSPPNVNATSHASTSNATTPRSTGISSSHQDASFKHSLPRQVRAPAV 242

Query: 241 FRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESGS 283
           FR HRVTA+SSGE E+ YQATV+I GHVFKGFLYD G VD KN +PS+S +HLES S
Sbjct: 243 FRCHRVTAVSSGEAEIVYQATVSISGHVFKGFLYDHG-VDDKNSFPSVSQMHLESSS 285

[Close]
BLAST of Carg14408 vs. TrEMBL
Match: tr|A0A2I0K3A8|A0A2I0K3A8_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_016668 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 3.2e-46
Identity = 147/288 (51.04%), Postives = 174/288 (60.42%), Query Frame = 0 

Query: 1   MLGLRDVLFLA-PTSTSDHHSSLPLHSPAALGVSVGIFPLLAATPSLXXXXXXXXXXXAE 60
           MLGLRDV+F++                   LGV V IFPLLAATP +           + 
Sbjct: 1   MLGLRDVVFISXXXXXXXXXXXXXXXXXXXLGVGVSIFPLLAATPCVDIASTDPQAASSS 60

Query: 61  EVSDRTRSLE---NLKKTHDFGFGKGDSFIAGDKGDAGESSMAVCRDCGNRAKKECEYRR 120
             + +  ++     +++  D G G G+        ++G S+M  CRDCGNRAKKEC YRR
Sbjct: 61  LAAAKKDNIPMGIEIERLDDGGSGNGNV-------NSGGSNMRACRDCGNRAKKECSYRR 120

Query: 121 CRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVAXXXXXXXXXXXXXXXXXXXXV 180
           CRTCCK RG  C+THVKSTWVPASRRRERQ  V M G++             XXXXXXX 
Sbjct: 121 CRTCCKSRGYDCATHVKSTWVPASRRRERQ--VAMVGIS-----------FAXXXXXXXX 180

Query: 181 LIPSXXXXXXXXXXXXXXXTTSRSFETTSNHQDASFKKSLPGQVRAPAVFRYHRVTAISS 240
               XXXXXXXXXXXXXX  T RSFE++   QDASFK+SLP QVRAPAVFR  RVTAIS 
Sbjct: 181 XXXXXXXXXXXXXXXXXXSATPRSFESSPFRQDASFKQSLPSQVRAPAVFRCIRVTAISD 240

Query: 241 GEGELAYQATVNIGGHVFKGFLYDQ--GVVDHKNGYPSLSHLHLESGS 283
              ELAYQATV+I GHVFKG+LYD   G  +      S+S L LE G+
Sbjct: 241 NAAELAYQATVSISGHVFKGYLYDHGTGAKNSSGSIASISKLRLEEGT 268

[Close]
BLAST of Carg14408 vs. TrEMBL
Match: tr|A0A251QAP1|A0A251QAP1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G036500 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 4.2e-46
Identity = 129/314 (41.08%), Postives = 154/314 (49.04%), Query Frame = 0 

Query: 1   MLGLRDVLFLAPTSTSDHH------SSLPLHSPAALGVSVGIFPLLAATPSLXXXXXXXX 60
           MLGLRD+L +APT +S H       S LPL S   LGV +GIFPLL ATP          
Sbjct: 1   MLGLRDILLIAPTPSSMHQQNQPISSDLPLPSSTTLGVGLGIFPLLTATP------CAPH 60

Query: 61  XXXAEEVSDRTRSLENLKKTHDFGFGKGDSFIAGDKGDAGES------------------ 120
                EV+  +     L++  +    K D    G+ G   E                   
Sbjct: 61  APTTAEVNSDSSHFWGLRRCQELNPSKQDMLNFGNHGAQHEQVVECEGXXXXXXXXXXXX 120

Query: 121 -----SMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVM 180
                 M  C+DCGN+AKK CEY RCRTCC+GRG  CSTHVKSTWVPA+RRRERQM V  
Sbjct: 121 XXXXXXMKACKDCGNKAKKGCEYGRCRTCCRGRGYDCSTHVKSTWVPAARRRERQMGVT- 180

Query: 181 DGVAXXXXXXXXXXXXXXXXXXXXVLIPSXXXXXXXXXXXXXXXTTSRSFETTSNHQDAS 240
                                   V +P                             DA+
Sbjct: 181 ------------------------VAVPG-----------------------VGGGGDAN 240

Query: 241 FKKSLPGQVRAPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYP 286
            K+SLP +VRAPAVFR HRVTAIS+G  ELAYQATV I GHVF+G LYD G VD  N +P
Sbjct: 241 IKQSLPDKVRAPAVFRCHRVTAISNGAAELAYQATVKISGHVFQGLLYDHG-VDKDNAFP 259

The following BLAST results are available for this feature:
BLAST of Carg14408 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022945608.15.1e-128100.00protein SHI RELATED SEQUENCE 6-like [Cucurbita moschata][more]
XP_023541249.19.7e-11189.90protein SHI RELATED SEQUENCE 6-like [Cucurbita pepo subsp. pepo][more]
XP_022967015.11.1e-10689.24protein SHI RELATED SEQUENCE 6-like [Cucurbita maxima][more]
XP_004142483.11.3e-8671.48PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus] >KGN52321.1 hypot... [more]
XP_008446964.13.7e-8671.15PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo][more]
BLAST of Carg14408 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G12330.41.3e-3256.52Lateral root primordium (LRP) protein-related[more]
AT3G54430.17.1e-3141.97SHI-related sequence 6[more]
AT1G75520.12.4e-2652.57SHI-related sequence 5[more]
AT3G51060.11.2e-2538.89Lateral root primordium (LRP) protein-related[more]
AT1G19790.12.0e-2550.27SHI-related sequence 7[more]
BLAST of Carg14408 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q94CK9|LRP1_ARATH6.8e-3142.57Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana OX=3702 GN=LRP1 PE=1 S... [more]
sp|Q9M2U4|SRS6_ARATH1.3e-2941.97Protein SHI RELATED SEQUENCE 6 OS=Arabidopsis thaliana OX=3702 GN=SRS6 PE=1 SV=1[more]
sp|Q9LQZ5|SRS5_ARATH4.2e-2552.57Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1[more]
sp|Q9SD40|SRS1_ARATH2.1e-2438.89Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2[more]
sp|Q9FXH7|SRS7_ARATH3.6e-2450.27Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1[more]
BLAST of Carg14408 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KWX6|A0A0A0KWX6_CUCSA8.4e-8771.48Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623840 PE=4 SV=1[more]
tr|A0A1S3BFS5|A0A1S3BFS5_CUCME2.4e-8671.15protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo OX=3656 GN=LOC103489517 PE=4 S... [more]
tr|A0A2I4GZU2|A0A2I4GZU2_9ROSI3.0e-6048.82protein LATERAL ROOT PRIMORDIUM 1 OS=Juglans regia OX=51240 GN=LOC109012318 PE=4... [more]
tr|A0A2I0K3A8|A0A2I0K3A8_PUNGR3.2e-4651.04Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_016668 PE=4 SV=1[more]
tr|A0A251QAP1|A0A251QAP1_PRUPE4.2e-4641.08Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G036500 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007818SHI
IPR006511SHI_C
IPR006510Znf_LRP1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg14408-RACarg14408-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006510Zinc finger, lateral root primordium type 1TIGRFAMTIGR01623TIGR01623coord: 100..142
e-value: 1.9E-24
score: 83.3
NoneNo IPR availablePFAMPF05142DUF702coord: 99..263
e-value: 8.9E-55
score: 185.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 181..213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 180..213
NoneNo IPR availablePANTHERPTHR31604:SF2PROTEIN SHI RELATED SEQUENCE 6coord: 15..284
IPR006511SHORT INTERNODES, C-terminalTIGRFAMTIGR01624TIGR01624coord: 216..263
e-value: 2.7E-25
score: 86.0
IPR007818SHI protein familyPANTHERPTHR31604FAMILY NOT NAMEDcoord: 15..284