CmaCh04G013270 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G013270
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionLateral root primordium protein-related, putative
LocationCma_Chr04 : 6768933 .. 6770721 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCAGAGTTTGAAGAATGAGCTTCATCTTCTTCCTTCCTTCCCGCTCTCTCTCTCTCTCTCTGTCTCTGTTCTCTGTTAGTGTGAAATGAGAGAGAATTCGAGTCCATGAACAGAGCAACAGAATTGCTTTTGGTTTAAGAAATTAATTCTTTTTCACCACACACACACACACACACACACACCGCAAAATCCCCACCTCCCAAACGAACTATACTCTGAAAATTTCATCATTTAAATAATACTGTTCTTGGCCTTCTCGCCCCAATTCAGAATAACCCTCTTTCATTCTGAATCTCAATTTCCAGGCCTTTCTTTCTCCTTTTGTGTTAATACAACAATGTTGGGTCTCCGTGATGTTCTATTTATAGCACCGACGCCTTCTTCTCTTCACCAACACACCCAAATCATTTCTTCTGATCATCACCCATCTCTTCCTCTGCCCTCCTCCACAGCTCTTGGCGTCAGCGTCGGCATTTTCCCCCTTCTTGCTGCAACCCCATGTCTCCAGCCGCCCCCTAATCAGATGCCTGATGAAGTTAGCGATCGTTGTCGGAGTTTGGAGAATCTAAAGAGAACCCAGGATTTTGGGTTTGGGAAAGGGGATTCGTTGATCGGCGGTGGCGGAAATCATGGCTACGACGACCAAGTGAAAGGCGATGGTGGCGATGGTTCTCTGGGTGTGTGTAGGGACTGTGGAAACAGAGCAAAGAAGGAGTGCGAGTATCGGAGGTGTAGGACTTGTTGTAAAGGACGTGGGAATCATTGCTCTACGCACGTGAAGAGCACGTGGGTGCCGGCATCTCGCCGCCGTGAGCGGCAGATGTTGGTGGTGATGGATGGCGTCGCCACTAGTGGGTCTTCTGGTTCTTCTTCTGCTGGTGCTAAAAGGCCTAAAGTCTTGATTCCCTCACAGACTGCCGCCGCCGCTTCCACTTCCAATGCCACCACTCCCCGGAGCTTCGAAACAACCTCTAGTCATCAAGGTAAAACTCTCCCTAACTATCTCTTTACATTTCTCCATTTTTGTTTCCTTGTGTTTCTTACTGAATTCAGAATCATGAGCAGCAATTATGAGATGTTTGTTCACTCTGTTTTTCACTCTGTTTCTCTCTATGTAATGATTTGGTTACCTGTGTCTTTATGTATAATGTTAGAATAGTGCTGATGAACTTAGGATTAGTTGGGAATGCCTTCTCAAGTGTTGAAAAGGGGTTTTAAGCGTTTAGAAAGTCATTCCAAAACGACCCATGATGCTAAAACATACGCTTATAATACTCAGTTAACCACCATTGGATTTCTCTTGACTTTGAAACCAGATGCAAGCTTCAAGAAGTCGTTACCGGGGCAAGTTCGGGCTCCAGCCGTGTTCAAGTGCCATAGAGTGACAGCCATTAGCAGTGGTGTAGGTGAGTTAACTTACCAAGCAACAGTCAACATTGGTGGCCATGTCTTCAAAGGATTTCTTTATGATCAAGGAGCTGATGTTAAAAATGCACTCCCATCTATTTCACACCTCCATTTGGAAAGTGGTAATCACCTCAGGGATTAAACATTCCTACTCTCTTTTCTATCACTCCCCTCTTCCTCCCTGCTGAGGATCACCTGAAAACTCGATCTCGGCCACCCGAAAATATCACATCTCTACTAGATTTCAGTGATCTGCTATGTTATCTACAAGTTCTATATAGTTTTCATGATGAAATGCAATGAATTTGCACTAAATAGAACACCAAAGTGCATAGTTGTAATAGGATCTTCTGTTCTATAGTTTTTGTAGCCTTAAGCTAG

mRNA sequence

GGCAGAGTTTGAAGAATGAGCTTCATCTTCTTCCTTCCTTCCCGCTCTCTCTCTCTCTCTCTGTCTCTGTTCTCTGTTAGTGTGAAATGAGAGAGAATTCGAGTCCATGAACAGAGCAACAGAATTGCTTTTGGTTTAAGAAATTAATTCTTTTTCACCACACACACACACACACACACACACCGCAAAATCCCCACCTCCCAAACGAACTATACTCTGAAAATTTCATCATTTAAATAATACTGTTCTTGGCCTTCTCGCCCCAATTCAGAATAACCCTCTTTCATTCTGAATCTCAATTTCCAGGCCTTTCTTTCTCCTTTTGTGTTAATACAACAATGTTGGGTCTCCGTGATGTTCTATTTATAGCACCGACGCCTTCTTCTCTTCACCAACACACCCAAATCATTTCTTCTGATCATCACCCATCTCTTCCTCTGCCCTCCTCCACAGCTCTTGGCGTCAGCGTCGGCATTTTCCCCCTTCTTGCTGCAACCCCATGTCTCCAGCCGCCCCCTAATCAGATGCCTGATGAAGTTAGCGATCGTTGTCGGAGTTTGGAGAATCTAAAGAGAACCCAGGATTTTGGGTTTGGGAAAGGGGATTCGTTGATCGGCGGTGGCGGAAATCATGGCTACGACGACCAAGTGAAAGGCGATGGTGGCGATGGTTCTCTGGGTGTGTGTAGGGACTGTGGAAACAGAGCAAAGAAGGAGTGCGAGTATCGGAGGTGTAGGACTTGTTGTAAAGGACGTGGGAATCATTGCTCTACGCACGTGAAGAGCACGTGGGTGCCGGCATCTCGCCGCCGTGAGCGGCAGATGTTGGTGGTGATGGATGGCGTCGCCACTAGTGGGTCTTCTGGTTCTTCTTCTGCTGGTGCTAAAAGGCCTAAAGTCTTGATTCCCTCACAGACTGCCGCCGCCGCTTCCACTTCCAATGCCACCACTCCCCGGAGCTTCGAAACAACCTCTAGTCATCAAGATGCAAGCTTCAAGAAGTCGTTACCGGGGCAAGTTCGGGCTCCAGCCGTGTTCAAGTGCCATAGAGTGACAGCCATTAGCAGTGGTGTAGGTGAGTTAACTTACCAAGCAACAGTCAACATTGGTGGCCATGTCTTCAAAGGATTTCTTTATGATCAAGGAGCTGATGTTAAAAATGCACTCCCATCTATTTCACACCTCCATTTGGAAAGTGTTTTTGTAGCCTTAAGCTAG

Coding sequence (CDS)

ATGTTGGGTCTCCGTGATGTTCTATTTATAGCACCGACGCCTTCTTCTCTTCACCAACACACCCAAATCATTTCTTCTGATCATCACCCATCTCTTCCTCTGCCCTCCTCCACAGCTCTTGGCGTCAGCGTCGGCATTTTCCCCCTTCTTGCTGCAACCCCATGTCTCCAGCCGCCCCCTAATCAGATGCCTGATGAAGTTAGCGATCGTTGTCGGAGTTTGGAGAATCTAAAGAGAACCCAGGATTTTGGGTTTGGGAAAGGGGATTCGTTGATCGGCGGTGGCGGAAATCATGGCTACGACGACCAAGTGAAAGGCGATGGTGGCGATGGTTCTCTGGGTGTGTGTAGGGACTGTGGAAACAGAGCAAAGAAGGAGTGCGAGTATCGGAGGTGTAGGACTTGTTGTAAAGGACGTGGGAATCATTGCTCTACGCACGTGAAGAGCACGTGGGTGCCGGCATCTCGCCGCCGTGAGCGGCAGATGTTGGTGGTGATGGATGGCGTCGCCACTAGTGGGTCTTCTGGTTCTTCTTCTGCTGGTGCTAAAAGGCCTAAAGTCTTGATTCCCTCACAGACTGCCGCCGCCGCTTCCACTTCCAATGCCACCACTCCCCGGAGCTTCGAAACAACCTCTAGTCATCAAGATGCAAGCTTCAAGAAGTCGTTACCGGGGCAAGTTCGGGCTCCAGCCGTGTTCAAGTGCCATAGAGTGACAGCCATTAGCAGTGGTGTAGGTGAGTTAACTTACCAAGCAACAGTCAACATTGGTGGCCATGTCTTCAAAGGATTTCTTTATGATCAAGGAGCTGATGTTAAAAATGCACTCCCATCTATTTCACACCTCCATTTGGAAAGTGTTTTTGTAGCCTTAAGCTAG

Protein sequence

MLGLRDVLFIAPTPSSLHQHTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLQPPPNQMPDEVSDRCRSLENLKRTQDFGFGKGDSLIGGGGNHGYDDQVKGDGGDGSLGVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATSGSSGSSSAGAKRPKVLIPSQTAAAASTSNATTPRSFETTSSHQDASFKKSLPGQVRAPAVFKCHRVTAISSGVGELTYQATVNIGGHVFKGFLYDQGADVKNALPSISHLHLESVFVALS
Homology
[Close]
BLAST of CmaCh04G013270 vs. Swiss-Prot
Match: LRP1_ARATH (Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana GN=LRP1 PE=1 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 4.1e-52
Identity = 135/295 (45.76%), Postives = 176/295 (59.66%), Query Frame = 1 

Query: 1   MLGLRDVLFIAPTPSSLHQHTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLQPPP 60
           M+GLRDV  +AP     HQ+  +IS   H +    ++ ALGV  G+ PLL A     P  
Sbjct: 3   MVGLRDVFLVAPAYH--HQNAGVISGSDHMNSNAAAAAALGV--GVIPLLTAGT---PQQ 62

Query: 61  NQMPDEVS-----DRCRSLENLKRTQDFGF-GKGDSLIGGGGNHGYDDQVKGDGGDGSLG 120
           N    +++      R ++  N   TQ   F     + +G   N+       G G  G+  
Sbjct: 63  NVEDSDINFLGNNRRWQNNNNNHETQYLHFKSTNQTTVGTSSNNSGS----GSGASGT-A 122

Query: 121 VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATSGS 180
            C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV A+RRRERQ++       T+GS
Sbjct: 123 TCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVMPT-GANPTAGS 182

Query: 181 SGSSSAGAKRPKVLIPSQTAAAASTSNATT----PRSFETTSSHQDAS-FKKSLPGQVRA 240
           S S+S+G K+P+++   Q     +TS+ +T    P+SFET+SS QD    +++ PGQVRA
Sbjct: 183 SLSTSSGTKKPRIVGSQQQQQQQATSHTSTSNTPPQSFETSSSRQDGGGSREAWPGQVRA 242

Query: 241 PAVFKCHRVTAISSGVGELTYQATVNIGGHVFKGFLYDQGADVKNALPSISHLHL 285
            AVFKC RVTA+  G  E  YQA V IGGHVFKGFLYDQG + K   PS+S LHL
Sbjct: 243 AAVFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFLYDQGLEPKEGFPSMSDLHL 284

[Close]
BLAST of CmaCh04G013270 vs. Swiss-Prot
Match: SRS6_ARATH (Protein SHI RELATED SEQUENCE 6 OS=Arabidopsis thaliana GN=SRS6 PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 4.7e-32
Identity = 79/167 (47.31%), Postives = 99/167 (59.28%), Query Frame = 1 

Query: 115 VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATSGS 174
           VCRDCGNRAKKEC + RCRTCCK RG +C THVKSTW+P+S  R                
Sbjct: 40  VCRDCGNRAKKECLFERCRTCCKSRGYNCVTHVKSTWIPSSATR---------------- 99

Query: 175 SGSSSAGAKRPKVLIPSQTAAAASTSNATTPRSFETTSSHQDASFKKSLPGQVRAPAVFK 234
             SSS   ++ K+ I  Q++   S           TT+S Q+  F++ LPG++ APAVFK
Sbjct: 100 -SSSSPSERKKKLKIDKQSSPNVSL--------LPTTTSRQERGFREGLPGKIEAPAVFK 159

Query: 235 CHRVTAISSG-VGELTYQATVNIGGHVFKGFLYDQGADVKNALPSIS 281
             RVTAIS+    E+ YQATV I GH+FKGFL+  G D   A P +S
Sbjct: 160 RTRVTAISNNEQAEIGYQATVTISGHIFKGFLHYYGVDHNKAFPCLS 181

[Close]
BLAST of CmaCh04G013270 vs. Swiss-Prot
Match: SRS2_ARATH (Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=SRS2 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.2e-30
Identity = 72/157 (45.86%), Postives = 96/157 (61.15%), Query Frame = 1 

Query: 116 CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATSGSS 175
           CRDCGN+AKK+C + RCRTCCK RG  CSTHV+STW+P +RRRERQ  + M      G S
Sbjct: 94  CRDCGNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHMSTSGGGGGS 153

Query: 176 GSSSAGAKRPKVLIPSQTAAAASTSNATTPRSFETTSSHQDASFKKSLPGQVRAPAVFKC 235
           GS  AG     +    +      TS+++   S        +ASF    PG+V + A+F+C
Sbjct: 154 GSGGAGGGGSSIPKRHRDPTLPGTSSSSRLPSHSAGLEMGEASF----PGEVSSDALFRC 213

Query: 236 HRVTAI-SSGVGELTYQATVNIGGHVFKGFLYDQGAD 272
            +++ +   G G+  YQ TVNIGGH+FKG LYDQG +
Sbjct: 214 VKMSGVDDGGDGQYAYQTTVNIGGHLFKGILYDQGPE 246

[Close]
BLAST of CmaCh04G013270 vs. Swiss-Prot
Match: SHI_ARATH (Protein SHORT INTERNODES OS=Arabidopsis thaliana GN=SHI PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 7.8e-27
Identity = 76/164 (46.34%), Postives = 98/164 (59.76%), Query Frame = 1 

Query: 109 GDGSLGV-CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMD 168
           G GS G  C+DCGN++KK+C + RCRTCCK RG  C THVKSTWVPA++RRERQ  +   
Sbjct: 112 GSGSGGPSCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQL--- 171

Query: 169 GVATSGSSGSSSAGA--KRPKVLIPSQTAAAASTSNATTPRSFETTSSHQDASFKKSLPG 228
              ++G       G+  KR +  IP     A STS A T      TS  +  +F    P 
Sbjct: 172 ---STGQQPQQLGGSVPKRQRERIP-----ARSTSMAYTRIPSNNTSGLEVGNF----PP 231

Query: 229 QVRAPAVFKCHRVTAISSGVGELTYQATVNIGGHVFKGFLYDQG 270
           +V + AVF+C RV+++     E  Y+  V+IGGHVFKG LYDQG
Sbjct: 232 EVSSSAVFRCVRVSSVDDEEEEYAYKTAVSIGGHVFKGVLYDQG 260

[Close]
BLAST of CmaCh04G013270 vs. Swiss-Prot
Match: SRS1_ARATH (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana GN=SRS1 PE=1 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 1.3e-26
Identity = 76/184 (41.30%), Postives = 103/184 (55.98%), Query Frame = 1 

Query: 88  GDSLIGGGGNHGYDDQVKGDG-GDGSLGV-CRDCGNRAKKECEYRRCRTCCKGRGNHCST 147
           G++   G G       ++  G G GS GV C+DCGN+AKK+C + RCRTCCK RG  CST
Sbjct: 114 GETSTAGAGRAAAMMMIRSGGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECST 173

Query: 148 HVKSTWVPASRRRERQMLVVMDGVATSGSSGSSSAGAKRPKVLIPSQTAAAASTSNATTP 207
           HV+STWVPA++RRERQ  +      T    G S    KR +  +P+ +++   T      
Sbjct: 174 HVRSTWVPAAKRRERQQQLATVQPQTQLPRGESV--PKRHRENLPATSSSLVCT------ 233

Query: 208 RSFETTSSHQDASFKKSLPGQVRAPAVFKCHRVTAISSGVGELTYQATVNIGGHVFKGFL 267
                  SH       + P +V + AVF+C RV+++  G  E  YQ  V+IGGH+FKG L
Sbjct: 234 ----RIPSHSGLEV-GNFPAEVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGIL 284

Query: 268 YDQG 270
           YD G
Sbjct: 294 YDLG 284

[Close]
BLAST of CmaCh04G013270 vs. TrEMBL
Match: A0A0A0KWX6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G623840 PE=4 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 4.2e-136
Identity = 256/297 (86.20%), Postives = 270/297 (90.91%), Query Frame = 1 

Query: 1   MLGLRDVLFIAPTPSSLHQHTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCL---Q 60
           MLGLRDVLFIAPTPSSLHQ TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCL   Q
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  PPPNQ-MPDEVSDRCRSLENLKRTQDFGFGKGDSLIGGGGNHGYDDQVKGDGGDGSLGVC 120
           PPPN   PD+V+DR R+ +NLKRTQDFGFGKG+SLI G GN+G D+ VKGD GDGS+ VC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATS---- 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPA+RRRERQMLVVMDGVAT+    
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPKVLIPSQT---AAAASTSNATTPRSFETTSSHQDASFKKSLPGQVRA 240
           GSSGSSSAGAKRP+VLIPSQ+   AAAASTSNATTPRSFETTSSHQDASFKKSLPG VRA
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA 240

Query: 241 PAVFKCHRVTAISSGVGELTYQATVNIGGHVFKGFLYDQGADVKNALPSISHLHLES 287
           PAVF+CHRVTAISSG GEL YQATVNIGGHVFKGFLYDQGAD KNA PSISHLHL+S
Sbjct: 241 PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDS 297

[Close]
BLAST of CmaCh04G013270 vs. TrEMBL
Match: A0A0D2Q8N8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G123900 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 2.0e-66
Identity = 150/311 (48.23%), Postives = 191/311 (61.41%), Query Frame = 1 

Query: 1   MLGLRDVLFIAPTPSSLHQHTQIISSDHHPSLPLPS---------STALGVSVGIFPLLA 60
           M+GLRD + +AP   + H H       HH   P+ S         STALGV VG+FPLL 
Sbjct: 3   MVGLRDFVVVAPASFNHHHHHH---HHHHTQDPIMSNDQISGPSASTALGVGVGVFPLLT 62

Query: 61  ATPCLQPPPNQMPDEVSDRCRSLEN---------------LKRTQDFGFGKGDS---LIG 120
           A PCL P   + PD  ++  R+  +               LK+   F      S   LI 
Sbjct: 63  AAPCLAPLNVEDPDLFNNNGRTKLSGMQLWQDQNSSPHNYLKKPSSFPDSNNSSSMNLIQ 122

Query: 121 GGGNHGYDDQVKGDGGDGSLGVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVP 180
             G  G  D+  G  G  S   C+DCGN+AKK+C +RRCRTCCK RG  C THVKSTWVP
Sbjct: 123 SSGGGGMGDRESGGSGSSSATTCQDCGNQAKKDCSHRRCRTCCKSRGFDCPTHVKSTWVP 182

Query: 181 ASRRRERQMLVVMDGVATSGSSGSSSAGAKRPKVLIPSQTAAAASTSNATTPRSFETTSS 240
           A+RRRERQ++      A +GSSGS+S GAK+P+++    T  + ++++ TTPRSF+T+SS
Sbjct: 183 AARRRERQLMAAAVTTAGAGSSGSTS-GAKKPRLITSQNTTTSHTSTSNTTPRSFDTSSS 242

Query: 241 HQDASFKKSLPGQVRAPAVFKCHRVTAISSGVGELTYQATVNIGGHVFKGFLYDQGADVK 285
           +QDA FK++LPGQVRAPAVFKC RVTA+  G  E  YQA V IGGHVFKGFLYDQG + +
Sbjct: 243 NQDAGFKETLPGQVRAPAVFKCVRVTAVEDGDDEFAYQAIVKIGGHVFKGFLYDQGVEGR 302

[Close]
BLAST of CmaCh04G013270 vs. TrEMBL
Match: A0A0B0MFM4_GOSAR (tRNA-dihydrouridine(16/17) synthase [NAD (P)(+)]-like protein OS=Gossypium arboreum GN=F383_06434 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 4.5e-66
Identity = 150/311 (48.23%), Postives = 190/311 (61.09%), Query Frame = 1 

Query: 1   MLGLRDVLFIAPTPSSLHQHTQIISSDHHPSLPLPS---------STALGVSVGIFPLLA 60
           M+GLRD + +AP   + H H       HH   P+ S         STALGV VG+FPLL 
Sbjct: 3   MVGLRDFVVVAPASFNHHHHHH---HHHHTQDPIMSNDQISGPSASTALGVGVGVFPLLT 62

Query: 61  ATPCLQPPPNQMPDEVSDRCRSLEN---------------LKRTQDFGFGKGDS---LIG 120
           A PCL P   + PD  ++  R+  +               LK+   F      S   LI 
Sbjct: 63  AAPCLAPLNVEDPDLFNNNGRTKLSGMQLWQDQNSSPHNYLKKPSSFPDSNNSSSMKLIQ 122

Query: 121 GGGNHGYDDQVKGDGGDGSLGVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVP 180
             G  G  D   G  G  S   C+DCGN+AKK+C +RRCRTCCK RG  C THVKSTWVP
Sbjct: 123 SSGGGGIGDGESGGSGSSSATTCQDCGNQAKKDCSHRRCRTCCKSRGFDCPTHVKSTWVP 182

Query: 181 ASRRRERQMLVVMDGVATSGSSGSSSAGAKRPKVLIPSQTAAAASTSNATTPRSFETTSS 240
           A+RRRERQ++      A +GSSGS+S GAK+P+++    T  + ++++ TTPRSF+T+SS
Sbjct: 183 AARRRERQLMAAAVTTAGAGSSGSTS-GAKKPRLITSQNTTTSHTSTSNTTPRSFDTSSS 242

Query: 241 HQDASFKKSLPGQVRAPAVFKCHRVTAISSGVGELTYQATVNIGGHVFKGFLYDQGADVK 285
           +QDA FK++LPGQVRAPAVFKC RVTA+  G  E  YQA V IGGHVFKGFLYDQG + +
Sbjct: 243 NQDAGFKETLPGQVRAPAVFKCVRVTAVEDGDDEFAYQAIVKIGGHVFKGFLYDQGVEGR 302

[Close]
BLAST of CmaCh04G013270 vs. TrEMBL
Match: A0A0B2RZR0_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_007372 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 3.2e-64
Identity = 154/296 (52.03%), Postives = 192/296 (64.86%), Query Frame = 1 

Query: 1   MLGLRDVLFIAPTPSSLHQHTQI--ISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLQP 60
           MLGLRD++FIAPTPS LH H Q   IS++HH +LPLPS  +L V +GIFPLL   P    
Sbjct: 3   MLGLRDLVFIAPTPSQLHHHQQHQPISAEHHSNLPLPSQASLSVGLGIFPLLTV-PHTND 62

Query: 61  PPNQMPDEVSDRCRSLENLKRTQDFGFGKGDSLIGGGGN---HGYDDQV-KGDGGDGSLG 120
              Q+ D  ++   +  N    +  G  + +S   G  N    G + Q+ + + G G   
Sbjct: 63  VQVQVQDCANNNTNTNTNYWNLKMCGATEVNSTRKGVMNMEDEGSNKQMMESEEGGGEFR 122

Query: 121 VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATSGS 180
           VC+DCGNRAK++C +RRCRTCCKGRG  CSTHVKSTWVPAS RR         G  +SG 
Sbjct: 123 VCQDCGNRAKRDCSFRRCRTCCKGRGFDCSTHVKSTWVPASMRRG-------GGGDSSGG 182

Query: 181 SGSSSAGA-KRPKVLIPSQTAAAA-----STSNATTPRSFETTSSHQDASFKKSLPGQVR 240
            G+S AGA KR + L  S+  AA+     STSNAT  +SF+T+S  QDA FK+SLP  VR
Sbjct: 183 DGNSDAGASKRLRTLGSSKNVAASATSHSSTSNATPTKSFDTSSCQQDAGFKQSLPRHVR 242

Query: 241 APAVFKCHRVTAISSGVGELTYQATVNIGGHVFKGFLYDQGADVKNALPSISHLHL 285
           APAVF+CHRV+AI SG  E+ Y ATV+I GHVFKGFLYD GAD +N +PS+S L L
Sbjct: 243 APAVFRCHRVSAIGSGEDEIVYMATVHISGHVFKGFLYDHGADARNDVPSVSELQL 290

[Close]
BLAST of CmaCh04G013270 vs. TrEMBL
Match: I1M0S8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G197300 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 3.2e-64
Identity = 157/301 (52.16%), Postives = 194/301 (64.45%), Query Frame = 1 

Query: 1   MLGLRDVLFIAPTPSSLHQHTQI--ISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLQP 60
           MLGLRD++FIAPTPS LH H Q   IS++HH +LPLPS  +L V +GIFPLL       P
Sbjct: 3   MLGLRDLVFIAPTPSQLHHHQQHQPISAEHHSNLPLPSQASLSVGLGIFPLLTV-----P 62

Query: 61  PPNQMPDEVSDRCRSLENLKRTQDF-----GFGKGDSLIGGGGN---HGYDDQV-KGDGG 120
             N +  +V D C +  N   T  +     G  + +S   G  N    G + Q+ + + G
Sbjct: 63  HTNDVQVQVQD-CANNNNNTNTNYWNLKMCGATEVNSTRKGVMNMEDEGSNKQMMESEEG 122

Query: 121 DGSLGVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGV 180
            G   VC+DCGNRAK++C +RRCRTCCKGRG  CSTHVKSTWVPAS RR         G 
Sbjct: 123 GGEFRVCQDCGNRAKRDCSFRRCRTCCKGRGFDCSTHVKSTWVPASMRRG-------GGG 182

Query: 181 ATSGSSGSSSAGA-KRPKVLIPSQTAAAA-----STSNATTPRSFETTSSHQDASFKKSL 240
            +SG  G+S AGA KR + L  S+  AA+     STSNAT  +SF+T+S  QDA FK+SL
Sbjct: 183 DSSGGDGNSDAGASKRLRTLGSSKNVAASATSHSSTSNATPTKSFDTSSCQQDAGFKQSL 242

Query: 241 PGQVRAPAVFKCHRVTAISSGVGELTYQATVNIGGHVFKGFLYDQGADVKNALPSISHLH 285
           P  VRAPAVF+CHRV+AI SG  E+ Y ATV+I GHVFKGFLYD GAD +N +PS+S L 
Sbjct: 243 PRHVRAPAVFRCHRVSAIGSGEDEIVYMATVHISGHVFKGFLYDHGADARNDVPSVSELQ 290

[Close]
BLAST of CmaCh04G013270 vs. TAIR10
Match: AT5G12330.4 (AT5G12330.4 Lateral root primordium (LRP) protein-related)

HSP 1 Score: 206.5 bits (524), Expect = 2.3e-53
Identity = 135/295 (45.76%), Postives = 176/295 (59.66%), Query Frame = 1 

Query: 1   MLGLRDVLFIAPTPSSLHQHTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLQPPP 60
           M+GLRDV  +AP     HQ+  +IS   H +    ++ ALGV  G+ PLL A     P  
Sbjct: 90  MVGLRDVFLVAPAYH--HQNAGVISGSDHMNSNAAAAAALGV--GVIPLLTAGT---PQQ 149

Query: 61  NQMPDEVS-----DRCRSLENLKRTQDFGF-GKGDSLIGGGGNHGYDDQVKGDGGDGSLG 120
           N    +++      R ++  N   TQ   F     + +G   N+       G G  G+  
Sbjct: 150 NVEDSDINFLGNNRRWQNNNNNHETQYLHFKSTNQTTVGTSSNNSGS----GSGASGT-A 209

Query: 121 VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATSGS 180
            C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV A+RRRERQ++       T+GS
Sbjct: 210 TCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVMPT-GANPTAGS 269

Query: 181 SGSSSAGAKRPKVLIPSQTAAAASTSNATT----PRSFETTSSHQDAS-FKKSLPGQVRA 240
           S S+S+G K+P+++   Q     +TS+ +T    P+SFET+SS QD    +++ PGQVRA
Sbjct: 270 SLSTSSGTKKPRIVGSQQQQQQQATSHTSTSNTPPQSFETSSSRQDGGGSREAWPGQVRA 329

Query: 241 PAVFKCHRVTAISSGVGELTYQATVNIGGHVFKGFLYDQGADVKNALPSISHLHL 285
            AVFKC RVTA+  G  E  YQA V IGGHVFKGFLYDQG + K   PS+S LHL
Sbjct: 330 AAVFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFLYDQGLEPKEGFPSMSDLHL 371

[Close]
BLAST of CmaCh04G013270 vs. TAIR10
Match: AT3G54430.1 (AT3G54430.1 SHI-related sequence 6)

HSP 1 Score: 139.8 bits (351), Expect = 2.6e-33
Identity = 79/167 (47.31%), Postives = 99/167 (59.28%), Query Frame = 1 

Query: 115 VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATSGS 174
           VCRDCGNRAKKEC + RCRTCCK RG +C THVKSTW+P+S  R                
Sbjct: 40  VCRDCGNRAKKECLFERCRTCCKSRGYNCVTHVKSTWIPSSATR---------------- 99

Query: 175 SGSSSAGAKRPKVLIPSQTAAAASTSNATTPRSFETTSSHQDASFKKSLPGQVRAPAVFK 234
             SSS   ++ K+ I  Q++   S           TT+S Q+  F++ LPG++ APAVFK
Sbjct: 100 -SSSSPSERKKKLKIDKQSSPNVSL--------LPTTTSRQERGFREGLPGKIEAPAVFK 159

Query: 235 CHRVTAISSG-VGELTYQATVNIGGHVFKGFLYDQGADVKNALPSIS 281
             RVTAIS+    E+ YQATV I GH+FKGFL+  G D   A P +S
Sbjct: 160 RTRVTAISNNEQAEIGYQATVTISGHIFKGFLHYYGVDHNKAFPCLS 181

[Close]
BLAST of CmaCh04G013270 vs. TAIR10
Match: AT4G36260.1 (AT4G36260.1 Lateral root primordium (LRP) protein-related)

HSP 1 Score: 135.2 bits (339), Expect = 6.5e-32
Identity = 72/157 (45.86%), Postives = 96/157 (61.15%), Query Frame = 1 

Query: 116 CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATSGSS 175
           CRDCGN+AKK+C + RCRTCCK RG  CSTHV+STW+P +RRRERQ  + M      G S
Sbjct: 94  CRDCGNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHMSTSGGGGGS 153

Query: 176 GSSSAGAKRPKVLIPSQTAAAASTSNATTPRSFETTSSHQDASFKKSLPGQVRAPAVFKC 235
           GS  AG     +    +      TS+++   S        +ASF    PG+V + A+F+C
Sbjct: 154 GSGGAGGGGSSIPKRHRDPTLPGTSSSSRLPSHSAGLEMGEASF----PGEVSSDALFRC 213

Query: 236 HRVTAI-SSGVGELTYQATVNIGGHVFKGFLYDQGAD 272
            +++ +   G G+  YQ TVNIGGH+FKG LYDQG +
Sbjct: 214 VKMSGVDDGGDGQYAYQTTVNIGGHLFKGILYDQGPE 246

[Close]
BLAST of CmaCh04G013270 vs. TAIR10
Match: AT5G66350.1 (AT5G66350.1 Lateral root primordium (LRP) protein-related)

HSP 1 Score: 122.5 bits (306), Expect = 4.4e-28
Identity = 76/164 (46.34%), Postives = 98/164 (59.76%), Query Frame = 1 

Query: 109 GDGSLGV-CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMD 168
           G GS G  C+DCGN++KK+C + RCRTCCK RG  C THVKSTWVPA++RRERQ  +   
Sbjct: 112 GSGSGGPSCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQL--- 171

Query: 169 GVATSGSSGSSSAGA--KRPKVLIPSQTAAAASTSNATTPRSFETTSSHQDASFKKSLPG 228
              ++G       G+  KR +  IP     A STS A T      TS  +  +F    P 
Sbjct: 172 ---STGQQPQQLGGSVPKRQRERIP-----ARSTSMAYTRIPSNNTSGLEVGNF----PP 231

Query: 229 QVRAPAVFKCHRVTAISSGVGELTYQATVNIGGHVFKGFLYDQG 270
           +V + AVF+C RV+++     E  Y+  V+IGGHVFKG LYDQG
Sbjct: 232 EVSSSAVFRCVRVSSVDDEEEEYAYKTAVSIGGHVFKGVLYDQG 260

[Close]
BLAST of CmaCh04G013270 vs. TAIR10
Match: AT3G51060.1 (AT3G51060.1 Lateral root primordium (LRP) protein-related)

HSP 1 Score: 121.7 bits (304), Expect = 7.5e-28
Identity = 76/184 (41.30%), Postives = 103/184 (55.98%), Query Frame = 1 

Query: 88  GDSLIGGGGNHGYDDQVKGDG-GDGSLGV-CRDCGNRAKKECEYRRCRTCCKGRGNHCST 147
           G++   G G       ++  G G GS GV C+DCGN+AKK+C + RCRTCCK RG  CST
Sbjct: 114 GETSTAGAGRAAAMMMIRSGGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECST 173

Query: 148 HVKSTWVPASRRRERQMLVVMDGVATSGSSGSSSAGAKRPKVLIPSQTAAAASTSNATTP 207
           HV+STWVPA++RRERQ  +      T    G S    KR +  +P+ +++   T      
Sbjct: 174 HVRSTWVPAAKRRERQQQLATVQPQTQLPRGESV--PKRHRENLPATSSSLVCT------ 233

Query: 208 RSFETTSSHQDASFKKSLPGQVRAPAVFKCHRVTAISSGVGELTYQATVNIGGHVFKGFL 267
                  SH       + P +V + AVF+C RV+++  G  E  YQ  V+IGGH+FKG L
Sbjct: 234 ----RIPSHSGLEV-GNFPAEVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGIL 284

Query: 268 YDQG 270
           YD G
Sbjct: 294 YDLG 284

[Close]
BLAST of CmaCh04G013270 vs. NCBI nr
Match: gi|659092229|ref|XP_008446964.1| (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo])

HSP 1 Score: 494.6 bits (1272), Expect = 1.2e-136
Identity = 257/297 (86.53%), Postives = 271/297 (91.25%), Query Frame = 1 

Query: 1   MLGLRDVLFIAPTPSSLHQHTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCL---Q 60
           MLGLRDVLFIAPTPSSLHQ TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCL   Q
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  PPPNQ-MPDEVSDRCRSLENLKRTQDFGFGKGDSLIGGGGNHGYDDQVKGDGGDGSLGVC 120
           PPPN   PD+V+DR R+ +NLKRTQDFGFGKG+SLIGG GN+G D+ VKGD GDGS+ VC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIGGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATS---- 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPA+RRRERQMLVVMDGVAT+    
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPKVLIPSQT---AAAASTSNATTPRSFETTSSHQDASFKKSLPGQVRA 240
           GSSGSSSAGAKRP+VLIPSQ+   AAAASTSNATTPRSFETTSSHQDASFKKSLPG VRA
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA 240

Query: 241 PAVFKCHRVTAISSGVGELTYQATVNIGGHVFKGFLYDQGADVKNALPSISHLHLES 287
           PAVF+CHRVTAISSG GEL YQATVNIGGHVFKGFLYDQGAD KNA PSISHLHL+S
Sbjct: 241 PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDS 297

[Close]
BLAST of CmaCh04G013270 vs. NCBI nr
Match: gi|449449461|ref|XP_004142483.1| (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus])

HSP 1 Score: 492.3 bits (1266), Expect = 6.0e-136
Identity = 256/297 (86.20%), Postives = 270/297 (90.91%), Query Frame = 1 

Query: 1   MLGLRDVLFIAPTPSSLHQHTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCL---Q 60
           MLGLRDVLFIAPTPSSLHQ TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCL   Q
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  PPPNQ-MPDEVSDRCRSLENLKRTQDFGFGKGDSLIGGGGNHGYDDQVKGDGGDGSLGVC 120
           PPPN   PD+V+DR R+ +NLKRTQDFGFGKG+SLI G GN+G D+ VKGD GDGS+ VC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATS---- 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPA+RRRERQMLVVMDGVAT+    
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPKVLIPSQT---AAAASTSNATTPRSFETTSSHQDASFKKSLPGQVRA 240
           GSSGSSSAGAKRP+VLIPSQ+   AAAASTSNATTPRSFETTSSHQDASFKKSLPG VRA
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRA 240

Query: 241 PAVFKCHRVTAISSGVGELTYQATVNIGGHVFKGFLYDQGADVKNALPSISHLHLES 287
           PAVF+CHRVTAISSG GEL YQATVNIGGHVFKGFLYDQGAD KNA PSISHLHL+S
Sbjct: 241 PAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKNAFPSISHLHLDS 297

[Close]
BLAST of CmaCh04G013270 vs. NCBI nr
Match: gi|1009119153|ref|XP_015876225.1| (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 [Ziziphus jujuba])

HSP 1 Score: 278.9 bits (712), Expect = 1.0e-71
Identity = 167/331 (50.45%), Postives = 207/331 (62.54%), Query Frame = 1 

Query: 1   MLGLRDVLFIAP---------TPSSLHQHTQIISSDHHPSLPLPSSTALGVSVGIFPLLA 60
           MLGLRDVLFIAP         + SS H H       H  ++PLPSST+LGV +GIFPLL 
Sbjct: 1   MLGLRDVLFIAPQNQTTINISSSSSDHNHHH-----HQTNIPLPSSTSLGVGLGIFPLLT 60

Query: 61  ATPCLQPPPNQMPDEVSDRCRSLEN----------LKRTQDFGFGKGDS-------LIG- 120
           ATPC+  PP   P + +       +          LK+ Q+    K D        L+G 
Sbjct: 61  ATPCVTTPPPPPPPQPNPNINHPSSCNPDAYHYWSLKKFQELNSSKQDDHHHQNQLLLGP 120

Query: 121 --GGGNHGYDDQ-------VKGD-GGDGSLGVCRDCGNRAKKECEYRRCRTCCKGRGNHC 180
              G   GYD +       V+ D GG+ S   C+DCGNRAKK+C ++RCRTCCK RG  C
Sbjct: 121 NNNGDGDGYDHEREEEAQMVESDEGGNTSSRACKDCGNRAKKDCGFKRCRTCCKARGFDC 180

Query: 181 STHVKSTWVPASRRRERQMLVVMDGVATSGSSGS-----SSAGAKRPKVLIPSQ----TA 240
           STHV+STWVPASRRRER  ++V+   A  G+ G      SS+G KRP++L+PSQ    + 
Sbjct: 181 STHVRSTWVPASRRRERHEMMVLGSSAGGGAGGGDGSSGSSSGVKRPRILVPSQIGNNSG 240

Query: 241 AAASTSNATTPRSFETTSSHQDASFKKSLPGQVRAPAVFKCHRVTAISSGVGELTYQATV 286
           + ASTSN  TPRSF+   +HQDASFK+SLPG+VR+ AVF+CHRVTAIS+G  EL YQATV
Sbjct: 241 SHASTSNVNTPRSFDFGYAHQDASFKQSLPGKVRSSAVFRCHRVTAISNGEAELAYQATV 300

[Close]
BLAST of CmaCh04G013270 vs. NCBI nr
Match: gi|694394776|ref|XP_009372746.1| (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 [Pyrus x bretschneideri])

HSP 1 Score: 272.3 bits (695), Expect = 9.7e-70
Identity = 164/303 (54.13%), Postives = 189/303 (62.38%), Query Frame = 1 

Query: 1   MLGLRDVLFIAPTPSSLH-QHTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLQPP 60
           MLGLRD+L IAPTP+SLH Q  Q ISSDHH +LPLPSS ALGV +GIFPLL ATP    P
Sbjct: 1   MLGLRDILLIAPTPTSLHHQQHQPISSDHHTALPLPSSAALGVGLGIFPLLTATP--HAP 60

Query: 61  PNQMPDEVSDRCRSLENLKRTQDFGFGKGDSLIGGGGNHG--------------YDDQVK 120
             +   + S        L++ QD    K D L  G  NHG               D    
Sbjct: 61  TAEGNSDTS----HYWGLRKYQDPNSSKQDMLNFGNQNHGGAQQHEQVVDCHGNNDRDGA 120

Query: 121 GDGGDGSLGVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQ--ML 180
           G G   ++  C+DCGNRAKK CEYRRCRTCC+GRG HCSTHVKSTWVPASRRRERQ  + 
Sbjct: 121 GGGKSSNMKACKDCGNRAKKGCEYRRCRTCCRGRGYHCSTHVKSTWVPASRRRERQNMVT 180

Query: 181 VVMDGVATSGSSGSSSAGAKRPKVLIPSQTAAAASTSNATTPRSFETTSSHQDASFKKSL 240
           V + GV     S  SS+ AKRP+V +PSQ        NA+T           DA+ K+SL
Sbjct: 181 VAVPGVGGGEGSSGSSSVAKRPRVSVPSQ--------NAST-----------DANVKRSL 240

Query: 241 PGQVRAPAVFKCHRVTAISSGVGELTYQATVNIGGHVFKGFLYDQGADVKNALPSISHLH 287
           P +VRAPAVF+CHRVTAIS+G  EL YQATV I GHVF+G LYD G D  N LP IS  +
Sbjct: 241 PDKVRAPAVFRCHRVTAISNGEAELAYQATVKISGHVFRGLLYDHGVDENNTLPCISQPN 278

[Close]
BLAST of CmaCh04G013270 vs. NCBI nr
Match: gi|694394779|ref|XP_009372747.1| (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1-like isoform X2 [Pyrus x bretschneideri])

HSP 1 Score: 269.2 bits (687), Expect = 8.2e-69
Identity = 161/303 (53.14%), Postives = 186/303 (61.39%), Query Frame = 1 

Query: 1   MLGLRDVLFIAPTPSSLH-QHTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLQPP 60
           MLGLRD+L IAPTP+SLH Q  Q ISSDHH +LPLPSS ALGV +GIFPLL ATP    P
Sbjct: 1   MLGLRDILLIAPTPTSLHHQQHQPISSDHHTALPLPSSAALGVGLGIFPLLTATP--HAP 60

Query: 61  PNQMPDEVSDRCRSLENLKRTQDFGFGKGDSLIGGGGNHG--------------YDDQVK 120
             +   + S        L++ QD    K D L  G  NHG               D    
Sbjct: 61  TAEGNSDTS----HYWGLRKYQDPNSSKQDMLNFGNQNHGGAQQHEQVVDCHGNNDRDGA 120

Query: 121 GDGGDGSLGVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQ--ML 180
           G G   ++  C+DCGNRAKK CEYRRCRTCC+GRG HCSTHVKSTWVPASRRRERQ  + 
Sbjct: 121 GGGKSSNMKACKDCGNRAKKGCEYRRCRTCCRGRGYHCSTHVKSTWVPASRRRERQNMVT 180

Query: 181 VVMDGVATSGSSGSSSAGAKRPKVLIPSQTAAAASTSNATTPRSFETTSSHQDASFKKSL 240
           V + GV     S  SS+ AKRP+V +PSQ A                     +A+ K+SL
Sbjct: 181 VAVPGVGGGEGSSGSSSVAKRPRVSVPSQNA---------------------NANVKRSL 240

Query: 241 PGQVRAPAVFKCHRVTAISSGVGELTYQATVNIGGHVFKGFLYDQGADVKNALPSISHLH 287
           P +VRAPAVF+CHRVTAIS+G  EL YQATV I GHVF+G LYD G D  N LP IS  +
Sbjct: 241 PDKVRAPAVFRCHRVTAISNGEAELAYQATVKISGHVFRGLLYDHGVDENNTLPCISQPN 276

The following BLAST results are available for this feature:
BLAST of CmaCh04G013270 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LRP1_ARATH4.1e-5245.76Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana GN=LRP1 PE=1 SV=1[more]
SRS6_ARATH4.7e-3247.31Protein SHI RELATED SEQUENCE 6 OS=Arabidopsis thaliana GN=SRS6 PE=2 SV=1[more]
SRS2_ARATH1.2e-3045.86Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=SRS2 PE=2 SV=1[more]
SHI_ARATH7.8e-2746.34Protein SHORT INTERNODES OS=Arabidopsis thaliana GN=SHI PE=1 SV=1[more]
SRS1_ARATH1.3e-2641.30Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana GN=SRS1 PE=1 SV=2[more]
BLAST of CmaCh04G013270 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KWX6_CUCSA4.2e-13686.20Uncharacterized protein OS=Cucumis sativus GN=Csa_5G623840 PE=4 SV=1[more]
A0A0D2Q8N8_GOSRA2.0e-6648.23Uncharacterized protein OS=Gossypium raimondii GN=B456_006G123900 PE=4 SV=1[more]
A0A0B0MFM4_GOSAR4.5e-6648.23tRNA-dihydrouridine(16/17) synthase [NAD (P)(+)]-like protein OS=Gossypium arbor... [more]
A0A0B2RZR0_GLYSO3.2e-6452.03Uncharacterized protein OS=Glycine soja GN=glysoja_007372 PE=4 SV=1[more]
I1M0S8_SOYBN3.2e-6452.16Uncharacterized protein OS=Glycine max GN=GLYMA_13G197300 PE=4 SV=1[more]
BLAST of CmaCh04G013270 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G12330.42.3e-5345.76 Lateral root primordium (LRP) protein-related[more]
AT3G54430.12.6e-3347.31 SHI-related sequence 6[more]
AT4G36260.16.5e-3245.86 Lateral root primordium (LRP) protein-related[more]
AT5G66350.14.4e-2846.34 Lateral root primordium (LRP) protein-related[more]
AT3G51060.17.5e-2841.30 Lateral root primordium (LRP) protein-related[more]
BLAST of CmaCh04G013270 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659092229|ref|XP_008446964.1|1.2e-13686.53PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo][more]
gi|449449461|ref|XP_004142483.1|6.0e-13686.20PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus][more]
gi|1009119153|ref|XP_015876225.1|1.0e-7150.45PREDICTED: protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 [Ziziphus jujuba][more]
gi|694394776|ref|XP_009372746.1|9.7e-7054.13PREDICTED: protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 [Pyrus x bretschnei... [more]
gi|694394779|ref|XP_009372747.1|8.2e-6953.14PREDICTED: protein LATERAL ROOT PRIMORDIUM 1-like isoform X2 [Pyrus x bretschnei... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006510Znf_LRP1
IPR006511SHI_C
IPR007818SHI
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G013270.1CmaCh04G013270.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006510Zinc finger, lateral root primordium type 1TIGRFAMsTIGR01623TIGR01623coord: 115..157
score: 2.0
IPR006511Lateral Root Primordium type 1, C-terminalTIGRFAMsTIGR01624TIGR01624coord: 223..269
score: 9.3
IPR007818Protein of unknown function DUF702PFAMPF05142DUF702coord: 115..271
score: 2.4
NoneNo IPR availablePANTHERPTHR31604FAMILY NOT NAMEDcoord: 2..284
score: 4.0E
NoneNo IPR availablePANTHERPTHR31604:SF2PROTEIN SHI RELATED SEQUENCE 6coord: 2..284
score: 4.0E