Cucsa.011100 (gene) Cucumber (Gy14) v1

NameCucsa.011100
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionAt5g14410
Locationscaffold00154 : 420345 .. 420963 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCAACTCTCTGTTTCCTTCTAAAACCCGCCATGGCGGACCTCGAAACCGCATCGGCTGGGAAATTCCGGTACCGGAGACTGAGGTACAGCGAGGAGTTTGAGGAGGCGTTTGGTCGATCTAGAGAAGGAGGAGGAGAAGGGATTAGGAAGAGATGGAGGCGGCGGCGGTGGTGGTTCAGAATGAGAATGAGAAAGGGTTCTTCTTCTTTGTCGATTGGGAGGAGGTTGAAGAAACTGAGAATCCCAAGCTTGAGGAAGCTGTTGAGGAGGAAATGGCGACTGGTGAATGCGATGAGAGGATCGATTGCGAAGGTAGTGAAGAGATTTAGAGATGGAGAAGCGTATTTGGGAGATCTTTTTGCTGGAAATTACTTGTTTCTTCAGGTTAATCCAAGCTCTATGAAATGCTTGAAGAATCATCATCATCATCAACAACAACATGGATTTGATGTTCGGAATTTCCCTCAAACTTATTCACTTCCAAGCTTTATCTAATTAGTAATCAGTATAGTTTGGTTTTCTTCTTAATTTCTCTTATAATTGTTGTGTTTTATGTGATTCCTCACTCCCTTTCGAAATTTGAATGTTAATTAATAATCAACCACTGATGAACTGACCA

mRNA sequence

TCAACTCTCTGTTTCCTTCTAAAACCCGCCATGGCGGACCTCGAAACCGCATCGGCTGGGAAATTCCGGTACCGGAGACTGAGGTACAGCGAGGAGTTTGAGGAGGCGTTTGGTCGATCTAGAGAAGGAGGAGGAGAAGGGATTAGGAAGAGATGGAGGCGGCGGCGGTGGTGGTTCAGAATGAGAATGAGAAAGGGTTCTTCTTCTTTGTCGATTGGGAGGAGGTTGAAGAAACTGAGAATCCCAAGCTTGAGGAAGCTGTTGAGGAGGAAATGGCGACTGGTGAATGCGATGAGAGGATCGATTGCGAAGGTAGTGAAGAGATTTAGAGATGGAGAAGCGTATTTGGGAGATCTTTTTGCTGGAAATTACTTGTTTCTTCAGGTTAATCCAAGCTCTATGAAATGCTTGAAGAATCATCATCATCATCAACAACAACATGGATTTGATGTTCGGAATTTCCCTCAAACTTATTCACTTCCAAGCTTTATCTAATTAGTAATCAGTATAGTTTGGTTTTCTTCTTAATTTCTCTTATAATTGTTGTGTTTTATGTGATTCCTCACTCCCTTTCGAAATTTGAATGTTAATTAATAATCAACCACTGATGAACTGACCa

Coding sequence (CDS)

ATGGCGGACCTCGAAACCGCATCGGCTGGGAAATTCCGGTACCGGAGACTGAGGTACAGCGAGGAGTTTGAGGAGGCGTTTGGTCGATCTAGAGAAGGAGGAGGAGAAGGGATTAGGAAGAGATGGAGGCGGCGGCGGTGGTGGTTCAGAATGAGAATGAGAAAGGGTTCTTCTTCTTTGTCGATTGGGAGGAGGTTGAAGAAACTGAGAATCCCAAGCTTGAGGAAGCTGTTGAGGAGGAAATGGCGACTGGTGAATGCGATGAGAGGATCGATTGCGAAGGTAGTGAAGAGATTTAGAGATGGAGAAGCGTATTTGGGAGATCTTTTTGCTGGAAATTACTTGTTTCTTCAGGTTAATCCAAGCTCTATGAAATGCTTGAAGAATCATCATCATCATCAACAACAACATGGATTTGATGTTCGGAATTTCCCTCAAACTTATTCACTTCCAAGCTTTATCTAA

Protein sequence

MADLETASAGKFRYRRLRYSEEFEEAFGRSREGGGEGIRKRWRRRRWWFRMRMRKGSSSLSIGRRLKKLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRDGEAYLGDLFAGNYLFLQVNPSSMKCLKNHHHHQQQHGFDVRNFPQTYSLPSFI*
BLAST of Cucsa.011100 vs. TrEMBL
Match: A0A0A0KSD1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517900 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 2.6e-84
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1

Query: 1   MADLETASAGKFRYRRLRYSEEFEEAFGRSREGGGEGIRKRWRRRRWWFRMRMRKGSSSL 60
           MADLETASAGKFRYRRLRYSEEFEEAFGRSREGGGEGIRKRWRRRRWWFRMRMRKGSSSL
Sbjct: 1   MADLETASAGKFRYRRLRYSEEFEEAFGRSREGGGEGIRKRWRRRRWWFRMRMRKGSSSL 60

Query: 61  SIGRRLKKLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRDGEAYLGDLFAGNYLFLQVN 120
           SIGRRLKKLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRDGEAYLGDLFAGNYLFLQVN
Sbjct: 61  SIGRRLKKLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRDGEAYLGDLFAGNYLFLQVN 120

Query: 121 PSSMKCLKNHHHHQQQHGFDVRNFPQTYSLPSFI 155
           PSSMKCLKNHHHHQQQHGFDVRNFPQTYSLPSFI
Sbjct: 121 PSSMKCLKNHHHHQQQHGFDVRNFPQTYSLPSFI 154

BLAST of Cucsa.011100 vs. TrEMBL
Match: I3SHD4_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 5.8e-20
Identity = 62/130 (47.69%), Postives = 88/130 (67.69%), Query Frame = 1

Query: 1   MADLETASAGKFRYRRLRYSEEFEEAFGRSREGGGEGIRKRW--RRRRWWFRMRMRKGSS 60
           M++++ AS  KFRY+RL++            EGG E  R R   +R + WFR R R+   
Sbjct: 1   MSNIQIASVSKFRYQRLKH------------EGGYEIERDRVLIQRPKSWFRFRFRR--- 60

Query: 61  SLSIGRRLKKLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRDGEAYLGDLFAGNYLFLQ 120
            + I RR  +L+IPSL++L R++ RLV++MR S AKV+KRF+D + + GDLFAGNYLF+Q
Sbjct: 61  -IQIRRRF-RLKIPSLKRLWRKRVRLVSSMRLSYAKVLKRFKDNKVHFGDLFAGNYLFMQ 113

Query: 121 VNPSSMKCLK 129
           VNPSS+K L+
Sbjct: 121 VNPSSLKYLE 113

BLAST of Cucsa.011100 vs. TrEMBL
Match: K7MX61_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.8e-19
Identity = 61/128 (47.66%), Postives = 84/128 (65.62%), Query Frame = 1

Query: 1   MADLETASAGKFRYRRLRYSEEFEEAFGRSREGGGEGIRKRWRRRRWWFRMRMRKGSSSL 60
           M+ L+    GK RY+RLR+            E G +G R+R  R R WFR R       +
Sbjct: 87  MSTLQMVPLGKLRYQRLRH------------EKGWDGERER--RPRSWFRFRR------V 146

Query: 61  SIGRRLKKLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRDGEAYLGDLFAGNYLFLQVN 120
            I RRL +L+I SLR+L R++ RLV++MR S AKV+KRF++G+ + GDLFAGNYLF+ VN
Sbjct: 147 PIRRRL-RLKISSLRRLWRKRARLVSSMRISYAKVLKRFKEGQVHFGDLFAGNYLFMHVN 193

Query: 121 PSSMKCLK 129
           P+S+KCL+
Sbjct: 207 PASLKCLE 193

BLAST of Cucsa.011100 vs. TrEMBL
Match: A0A0B2NXL2_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_039264 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.8e-19
Identity = 61/128 (47.66%), Postives = 84/128 (65.62%), Query Frame = 1

Query: 1   MADLETASAGKFRYRRLRYSEEFEEAFGRSREGGGEGIRKRWRRRRWWFRMRMRKGSSSL 60
           M+ L+    GK RY+RLR+            E G +G R+R  R R WFR R       +
Sbjct: 11  MSTLQMVPLGKLRYQRLRH------------EKGWDGERER--RPRSWFRFRR------V 70

Query: 61  SIGRRLKKLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRDGEAYLGDLFAGNYLFLQVN 120
            I RRL +L+I SLR+L R++ RLV++MR S AKV+KRF++G+ + GDLFAGNYLF+ VN
Sbjct: 71  PIRRRL-RLKISSLRRLWRKRARLVSSMRISYAKVLKRFKEGQVHFGDLFAGNYLFMHVN 117

Query: 121 PSSMKCLK 129
           P+S+KCL+
Sbjct: 131 PASLKCLE 117

BLAST of Cucsa.011100 vs. TrEMBL
Match: I1N7H1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G078800 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.8e-19
Identity = 61/128 (47.66%), Postives = 84/128 (65.62%), Query Frame = 1

Query: 1   MADLETASAGKFRYRRLRYSEEFEEAFGRSREGGGEGIRKRWRRRRWWFRMRMRKGSSSL 60
           M+ L+    GK RY+RLR+            E G +G R+R  R R WFR R       +
Sbjct: 11  MSTLQMVPLGKLRYQRLRH------------EKGWDGERER--RPRSWFRFRR------V 70

Query: 61  SIGRRLKKLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRDGEAYLGDLFAGNYLFLQVN 120
            I RRL +L+I SLR+L R++ RLV++MR S AKV+KRF++G+ + GDLFAGNYLF+ VN
Sbjct: 71  PIRRRL-RLKISSLRRLWRKRARLVSSMRISYAKVLKRFKEGQVHFGDLFAGNYLFMHVN 117

Query: 121 PSSMKCLK 129
           P+S+KCL+
Sbjct: 131 PASLKCLE 117

BLAST of Cucsa.011100 vs. TAIR10
Match: AT5G14410.1 (AT5G14410.1 unknown protein)

HSP 1 Score: 65.5 bits (158), Expect = 3.4e-11
Identity = 43/111 (38.74%), Postives = 66/111 (59.46%), Query Frame = 1

Query: 43  RRRRWWFRMRMRKGSSSLSIGRRLK-KLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRD 102
           RRR  ++  R ++   SL   RR++ +++I  LR  +R+K    N ++  I K++KR ++
Sbjct: 27  RRRSSFYSYRFKR-VVSLGGRRRIRVRVKIRRLRGFVRKK---ANRVKTGILKILKRLKE 86

Query: 103 GEAYLGDLFAGNYLFLQVNPSSMKC-LKNHHHHQQQHGFDVRNFPQTYSLP 152
            +++ GDLFAGNYLF+QVNPSS+          Q Q+G    NFP   SLP
Sbjct: 87  SQSHFGDLFAGNYLFMQVNPSSLNAKYVFDKSFQGQNG----NFPSRLSLP 129

BLAST of Cucsa.011100 vs. NCBI nr
Match: gi|778703543|ref|XP_011655383.1| (PREDICTED: uncharacterized protein LOC105435522 [Cucumis sativus])

HSP 1 Score: 319.3 bits (817), Expect = 3.7e-84
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1

Query: 1   MADLETASAGKFRYRRLRYSEEFEEAFGRSREGGGEGIRKRWRRRRWWFRMRMRKGSSSL 60
           MADLETASAGKFRYRRLRYSEEFEEAFGRSREGGGEGIRKRWRRRRWWFRMRMRKGSSSL
Sbjct: 1   MADLETASAGKFRYRRLRYSEEFEEAFGRSREGGGEGIRKRWRRRRWWFRMRMRKGSSSL 60

Query: 61  SIGRRLKKLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRDGEAYLGDLFAGNYLFLQVN 120
           SIGRRLKKLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRDGEAYLGDLFAGNYLFLQVN
Sbjct: 61  SIGRRLKKLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRDGEAYLGDLFAGNYLFLQVN 120

Query: 121 PSSMKCLKNHHHHQQQHGFDVRNFPQTYSLPSFI 155
           PSSMKCLKNHHHHQQQHGFDVRNFPQTYSLPSFI
Sbjct: 121 PSSMKCLKNHHHHQQQHGFDVRNFPQTYSLPSFI 154

BLAST of Cucsa.011100 vs. NCBI nr
Match: gi|388503220|gb|AFK39676.1| (unknown [Lotus japonicus])

HSP 1 Score: 105.5 bits (262), Expect = 8.3e-20
Identity = 62/130 (47.69%), Postives = 88/130 (67.69%), Query Frame = 1

Query: 1   MADLETASAGKFRYRRLRYSEEFEEAFGRSREGGGEGIRKRW--RRRRWWFRMRMRKGSS 60
           M++++ AS  KFRY+RL++            EGG E  R R   +R + WFR R R+   
Sbjct: 1   MSNIQIASVSKFRYQRLKH------------EGGYEIERDRVLIQRPKSWFRFRFRR--- 60

Query: 61  SLSIGRRLKKLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRDGEAYLGDLFAGNYLFLQ 120
            + I RR  +L+IPSL++L R++ RLV++MR S AKV+KRF+D + + GDLFAGNYLF+Q
Sbjct: 61  -IQIRRRF-RLKIPSLKRLWRKRVRLVSSMRLSYAKVLKRFKDNKVHFGDLFAGNYLFMQ 113

Query: 121 VNPSSMKCLK 129
           VNPSS+K L+
Sbjct: 121 VNPSSLKYLE 113

BLAST of Cucsa.011100 vs. NCBI nr
Match: gi|571555341|ref|XP_006604105.1| (PREDICTED: uncharacterized protein LOC102659553 [Glycine max])

HSP 1 Score: 102.8 bits (255), Expect = 5.4e-19
Identity = 61/128 (47.66%), Postives = 84/128 (65.62%), Query Frame = 1

Query: 1   MADLETASAGKFRYRRLRYSEEFEEAFGRSREGGGEGIRKRWRRRRWWFRMRMRKGSSSL 60
           M+ L+    GK RY+RLR+            E G +G R+R  R R WFR R       +
Sbjct: 87  MSTLQMVPLGKLRYQRLRH------------EKGWDGERER--RPRSWFRFRR------V 146

Query: 61  SIGRRLKKLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRDGEAYLGDLFAGNYLFLQVN 120
            I RRL +L+I SLR+L R++ RLV++MR S AKV+KRF++G+ + GDLFAGNYLF+ VN
Sbjct: 147 PIRRRL-RLKISSLRRLWRKRARLVSSMRISYAKVLKRFKEGQVHFGDLFAGNYLFMHVN 193

Query: 121 PSSMKCLK 129
           P+S+KCL+
Sbjct: 207 PASLKCLE 193

BLAST of Cucsa.011100 vs. NCBI nr
Match: gi|734311187|gb|KHN00034.1| (hypothetical protein glysoja_039264 [Glycine soja])

HSP 1 Score: 102.8 bits (255), Expect = 5.4e-19
Identity = 61/128 (47.66%), Postives = 84/128 (65.62%), Query Frame = 1

Query: 1   MADLETASAGKFRYRRLRYSEEFEEAFGRSREGGGEGIRKRWRRRRWWFRMRMRKGSSSL 60
           M+ L+    GK RY+RLR+            E G +G R+R  R R WFR R       +
Sbjct: 11  MSTLQMVPLGKLRYQRLRH------------EKGWDGERER--RPRSWFRFRR------V 70

Query: 61  SIGRRLKKLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRDGEAYLGDLFAGNYLFLQVN 120
            I RRL +L+I SLR+L R++ RLV++MR S AKV+KRF++G+ + GDLFAGNYLF+ VN
Sbjct: 71  PIRRRL-RLKISSLRRLWRKRARLVSSMRISYAKVLKRFKEGQVHFGDLFAGNYLFMHVN 117

Query: 121 PSSMKCLK 129
           P+S+KCL+
Sbjct: 131 PASLKCLE 117

BLAST of Cucsa.011100 vs. NCBI nr
Match: gi|568831946|ref|XP_006470206.1| (PREDICTED: uncharacterized protein LOC102608484 [Citrus sinensis])

HSP 1 Score: 101.7 bits (252), Expect = 1.2e-18
Identity = 63/148 (42.57%), Postives = 94/148 (63.51%), Query Frame = 1

Query: 7   ASAGKFRYRRLRYSEEFEEAFGRSREGGGEGIRKRWR--RRRWWFRMRMRKGSSSLSIGR 66
           ASA KF Y+RL +     EA     +G     R+R    + R WF++R       L+I R
Sbjct: 2   ASAAKFPYQRLIHEGGLLEA-----DGDDHDYRRRVNVVKSRSWFKIRR------LNIKR 61

Query: 67  RLKKLRIPSLRKL-LRRKWRLVNAMRGSIAKVVKRFRDGEAYLGDLFAGNYLFLQVNPSS 126
           R + L++P LR+L LR+K+R+V A+R S AKV+KRF++ +A+ GDLFAGNYLFLQ+NP+S
Sbjct: 62  RFR-LKVPRLRRLVLRKKFRVVTAVRVSCAKVMKRFKESQAHFGDLFAGNYLFLQINPAS 121

Query: 127 MKCLKNHHHHQQQHGFDVRNFPQTYSLP 152
           MK ++ +    ++   ++   P +YSLP
Sbjct: 122 MKSIQKYSCQSKE--LNLHGLPLSYSLP 135

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KSD1_CUCSA2.6e-84100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517900 PE=4 SV=1[more]
I3SHD4_LOTJA5.8e-2047.69Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
K7MX61_SOYBN3.8e-1947.66Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
A0A0B2NXL2_GLYSO3.8e-1947.66Uncharacterized protein OS=Glycine soja GN=glysoja_039264 PE=4 SV=1[more]
I1N7H1_SOYBN3.8e-1947.66Uncharacterized protein OS=Glycine max GN=GLYMA_19G078800 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G14410.13.4e-1138.74 unknown protein[more]
Match NameE-valueIdentityDescription
gi|778703543|ref|XP_011655383.1|3.7e-84100.00PREDICTED: uncharacterized protein LOC105435522 [Cucumis sativus][more]
gi|388503220|gb|AFK39676.1|8.3e-2047.69unknown [Lotus japonicus][more]
gi|571555341|ref|XP_006604105.1|5.4e-1947.66PREDICTED: uncharacterized protein LOC102659553 [Glycine max][more]
gi|734311187|gb|KHN00034.1|5.4e-1947.66hypothetical protein glysoja_039264 [Glycine soja][more]
gi|568831946|ref|XP_006470206.1|1.2e-1842.57PREDICTED: uncharacterized protein LOC102608484 [Citrus sinensis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006661 phosphatidylinositol biosynthetic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.011100.1Cucsa.011100.1mRNA


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36795FAMILY NOT NAMEDcoord: 1..127
score: 8.6
NoneNo IPR availablePANTHERPTHR36795:SF2SUBFAMILY NOT NAMEDcoord: 1..127
score: 8.6

The following gene(s) are paralogous to this gene:

None