Cucsa.011100 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCAACTCTCTGTTTCCTTCTAAAACCCGCCATGGCGGACCTCGAAACCGCATCGGCTGGGAAATTCCGGTACCGGAGACTGAGGTACAGCGAGGAGTTTGAGGAGGCGTTTGGTCGATCTAGAGAAGGAGGAGGAGAAGGGATTAGGAAGAGATGGAGGCGGCGGCGGTGGTGGTTCAGAATGAGAATGAGAAAGGGTTCTTCTTCTTTGTCGATTGGGAGGAGGTTGAAGAAACTGAGAATCCCAAGCTTGAGGAAGCTGTTGAGGAGGAAATGGCGACTGGTGAATGCGATGAGAGGATCGATTGCGAAGGTAGTGAAGAGATTTAGAGATGGAGAAGCGTATTTGGGAGATCTTTTTGCTGGAAATTACTTGTTTCTTCAGGTTAATCCAAGCTCTATGAAATGCTTGAAGAATCATCATCATCATCAACAACAACATGGATTTGATGTTCGGAATTTCCCTCAAACTTATTCACTTCCAAGCTTTATCTAATTAGTAATCAGTATAGTTTGGTTTTCTTCTTAATTTCTCTTATAATTGTTGTGTTTTATGTGATTCCTCACTCCCTTTCGAAATTTGAATGTTAATTAATAATCAACCACTGATGAACTGACCA TCAACTCTCTGTTTCCTTCTAAAACCCGCCATGGCGGACCTCGAAACCGCATCGGCTGGGAAATTCCGGTACCGGAGACTGAGGTACAGCGAGGAGTTTGAGGAGGCGTTTGGTCGATCTAGAGAAGGAGGAGGAGAAGGGATTAGGAAGAGATGGAGGCGGCGGCGGTGGTGGTTCAGAATGAGAATGAGAAAGGGTTCTTCTTCTTTGTCGATTGGGAGGAGGTTGAAGAAACTGAGAATCCCAAGCTTGAGGAAGCTGTTGAGGAGGAAATGGCGACTGGTGAATGCGATGAGAGGATCGATTGCGAAGGTAGTGAAGAGATTTAGAGATGGAGAAGCGTATTTGGGAGATCTTTTTGCTGGAAATTACTTGTTTCTTCAGGTTAATCCAAGCTCTATGAAATGCTTGAAGAATCATCATCATCATCAACAACAACATGGATTTGATGTTCGGAATTTCCCTCAAACTTATTCACTTCCAAGCTTTATCTAATTAGTAATCAGTATAGTTTGGTTTTCTTCTTAATTTCTCTTATAATTGTTGTGTTTTATGTGATTCCTCACTCCCTTTCGAAATTTGAATGTTAATTAATAATCAACCACTGATGAACTGACCa ATGGCGGACCTCGAAACCGCATCGGCTGGGAAATTCCGGTACCGGAGACTGAGGTACAGCGAGGAGTTTGAGGAGGCGTTTGGTCGATCTAGAGAAGGAGGAGGAGAAGGGATTAGGAAGAGATGGAGGCGGCGGCGGTGGTGGTTCAGAATGAGAATGAGAAAGGGTTCTTCTTCTTTGTCGATTGGGAGGAGGTTGAAGAAACTGAGAATCCCAAGCTTGAGGAAGCTGTTGAGGAGGAAATGGCGACTGGTGAATGCGATGAGAGGATCGATTGCGAAGGTAGTGAAGAGATTTAGAGATGGAGAAGCGTATTTGGGAGATCTTTTTGCTGGAAATTACTTGTTTCTTCAGGTTAATCCAAGCTCTATGAAATGCTTGAAGAATCATCATCATCATCAACAACAACATGGATTTGATGTTCGGAATTTCCCTCAAACTTATTCACTTCCAAGCTTTATCTAA MADLETASAGKFRYRRLRYSEEFEEAFGRSREGGGEGIRKRWRRRRWWFRMRMRKGSSSLSIGRRLKKLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRDGEAYLGDLFAGNYLFLQVNPSSMKCLKNHHHHQQQHGFDVRNFPQTYSLPSFI*
BLAST of Cucsa.011100 vs. TrEMBL
Match: A0A0A0KSD1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517900 PE=4 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 2.6e-84 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1
BLAST of Cucsa.011100 vs. TrEMBL
Match: I3SHD4_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 5.8e-20 Identity = 62/130 (47.69%), Postives = 88/130 (67.69%), Query Frame = 1
BLAST of Cucsa.011100 vs. TrEMBL
Match: K7MX61_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 3.8e-19 Identity = 61/128 (47.66%), Postives = 84/128 (65.62%), Query Frame = 1
BLAST of Cucsa.011100 vs. TrEMBL
Match: A0A0B2NXL2_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_039264 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 3.8e-19 Identity = 61/128 (47.66%), Postives = 84/128 (65.62%), Query Frame = 1
BLAST of Cucsa.011100 vs. TrEMBL
Match: I1N7H1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G078800 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 3.8e-19 Identity = 61/128 (47.66%), Postives = 84/128 (65.62%), Query Frame = 1
BLAST of Cucsa.011100 vs. TAIR10
Match: AT5G14410.1 (AT5G14410.1 unknown protein) HSP 1 Score: 65.5 bits (158), Expect = 3.4e-11 Identity = 43/111 (38.74%), Postives = 66/111 (59.46%), Query Frame = 1
BLAST of Cucsa.011100 vs. NCBI nr
Match: gi|778703543|ref|XP_011655383.1| (PREDICTED: uncharacterized protein LOC105435522 [Cucumis sativus]) HSP 1 Score: 319.3 bits (817), Expect = 3.7e-84 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1
BLAST of Cucsa.011100 vs. NCBI nr
Match: gi|388503220|gb|AFK39676.1| (unknown [Lotus japonicus]) HSP 1 Score: 105.5 bits (262), Expect = 8.3e-20 Identity = 62/130 (47.69%), Postives = 88/130 (67.69%), Query Frame = 1
BLAST of Cucsa.011100 vs. NCBI nr
Match: gi|571555341|ref|XP_006604105.1| (PREDICTED: uncharacterized protein LOC102659553 [Glycine max]) HSP 1 Score: 102.8 bits (255), Expect = 5.4e-19 Identity = 61/128 (47.66%), Postives = 84/128 (65.62%), Query Frame = 1
BLAST of Cucsa.011100 vs. NCBI nr
Match: gi|734311187|gb|KHN00034.1| (hypothetical protein glysoja_039264 [Glycine soja]) HSP 1 Score: 102.8 bits (255), Expect = 5.4e-19 Identity = 61/128 (47.66%), Postives = 84/128 (65.62%), Query Frame = 1
BLAST of Cucsa.011100 vs. NCBI nr
Match: gi|568831946|ref|XP_006470206.1| (PREDICTED: uncharacterized protein LOC102608484 [Citrus sinensis]) HSP 1 Score: 101.7 bits (252), Expect = 1.2e-18 Identity = 63/148 (42.57%), Postives = 94/148 (63.51%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|