CSPI05G18040 (gene) Wild cucumber (PI 183967)

NameCSPI05G18040
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionAt5g14410
LocationChr5 : 19151190 .. 19151975 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACAAATAAACTTTACTTTATTTTTTTTTCTCTCACAACAAATGCATGTGAATTTATTTTTGCATTAATAGAAAAAGCAAAATCCCAACTTCCCATTTCCCAGAATCATTAATGACCTAAACCCTAAATTTCTCAACTTCTCTCACTCTTCCTTTTTAAAATGCACTGTCAACTCTCTGTTTCCTTCTAAAACCCGCCATGGCGGACCTCGAAACCGCATCGGCTGGGAAATTCCGGTACCGGAGACTGAGGTACAGCGAGGAGTTTGAGGAGGCGTTTGGTCGATCTAGAGAAGGAGGAGGAGAAGGGATTAGGAAGAGATGGAGGCGGCGGCGGTGGTGGTTCAGAATGAGAATGAGAAAGGGTTCTTCTTCTTTGTCGATTGGGAGGAGGTTGAAGAAACTGAGAATCCCAAGCTTGAGGAAGCTGTTGAGGAGGAAATGGCGACTGGTGAATGCGATGAGAGGATCGATTGCGAAGGTAGTGAAGAGATTTAGAGATGGAGAAGCGTATTTGGGAGATCTTTTTGCTGGAAATTACTTGTTTCTTCAGGTTAATCCAAGCTCTATGAAATGCTTGAAGAATCATCATCATCATCAACAACAACATGGATTTGATGTTCGGAATTTCCCTCAAACTTATTCACTTCCAAGCTTTATCTAATTAGTAATCAGTATAGTTTGGTTTTCTTCTTAATTTCTCTTATAATTGTTGTGTTTTATGTGATTCCTCACTCCCTTTCGAAATTTGAATGTTAATTAATAATCAACCACTGATGAACTGAC

mRNA sequence

ATGGCGGACCTCGAAACCGCATCGGCTGGGAAATTCCGGTACCGGAGACTGAGGTACAGCGAGGAGTTTGAGGAGGCGTTTGGTCGATCTAGAGAAGGAGGAGGAGAAGGGATTAGGAAGAGATGGAGGCGGCGGCGGTGGTGGTTCAGAATGAGAATGAGAAAGGGTTCTTCTTCTTTGTCGATTGGGAGGAGGTTGAAGAAACTGAGAATCCCAAGCTTGAGGAAGCTGTTGAGGAGGAAATGGCGACTGGTGAATGCGATGAGAGGATCGATTGCGAAGGTAGTGAAGAGATTTAGAGATGGAGAAGCGTATTTGGGAGATCTTTTTGCTGGAAATTACTTGTTTCTTCAGGTTAATCCAAGCTCTATGAAATGCTTGAAGAATCATCATCATCATCAACAACAACATGGATTTGATGTTCGGAATTTCCCTCAAACTTATTCACTTCCAAGCTTTATCTAA

Coding sequence (CDS)

ATGGCGGACCTCGAAACCGCATCGGCTGGGAAATTCCGGTACCGGAGACTGAGGTACAGCGAGGAGTTTGAGGAGGCGTTTGGTCGATCTAGAGAAGGAGGAGGAGAAGGGATTAGGAAGAGATGGAGGCGGCGGCGGTGGTGGTTCAGAATGAGAATGAGAAAGGGTTCTTCTTCTTTGTCGATTGGGAGGAGGTTGAAGAAACTGAGAATCCCAAGCTTGAGGAAGCTGTTGAGGAGGAAATGGCGACTGGTGAATGCGATGAGAGGATCGATTGCGAAGGTAGTGAAGAGATTTAGAGATGGAGAAGCGTATTTGGGAGATCTTTTTGCTGGAAATTACTTGTTTCTTCAGGTTAATCCAAGCTCTATGAAATGCTTGAAGAATCATCATCATCATCAACAACAACATGGATTTGATGTTCGGAATTTCCCTCAAACTTATTCACTTCCAAGCTTTATCTAA
BLAST of CSPI05G18040 vs. TrEMBL
Match: A0A0A0KSD1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517900 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 1.6e-81
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1

Query: 1   MADLETASAGKFRYRRLRYSEEFEEAFGRSREGGGEGIRKRWRRRRWWFRMRMRKGSSSL 60
           MADLETASAGKFRYRRLRYSEEFEEAFGRSREGGGEGIRKRWRRRRWWFRMRMRKGSSSL
Sbjct: 1   MADLETASAGKFRYRRLRYSEEFEEAFGRSREGGGEGIRKRWRRRRWWFRMRMRKGSSSL 60

Query: 61  SIGRRLKKLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRDGEAYLGDLFAGNYLFLQVN 120
           SIGRRLKKLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRDGEAYLGDLFAGNYLFLQVN
Sbjct: 61  SIGRRLKKLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRDGEAYLGDLFAGNYLFLQVN 120

Query: 121 PSSMKCLKNHHHHQQQHGFDVRNFPQTYSLPSFI 155
           PSSMKCLKNHHHHQQQHGFDVRNFPQTYSLPSFI
Sbjct: 121 PSSMKCLKNHHHHQQQHGFDVRNFPQTYSLPSFI 154

BLAST of CSPI05G18040 vs. TrEMBL
Match: I3SHD4_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 9.3e-18
Identity = 62/130 (47.69%), Postives = 88/130 (67.69%), Query Frame = 1

Query: 1   MADLETASAGKFRYRRLRYSEEFEEAFGRSREGGGEGIRKRW--RRRRWWFRMRMRKGSS 60
           M++++ AS  KFRY+RL++            EGG E  R R   +R + WFR R R+   
Sbjct: 1   MSNIQIASVSKFRYQRLKH------------EGGYEIERDRVLIQRPKSWFRFRFRR--- 60

Query: 61  SLSIGRRLKKLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRDGEAYLGDLFAGNYLFLQ 120
            + I RR  +L+IPSL++L R++ RLV++MR S AKV+KRF+D + + GDLFAGNYLF+Q
Sbjct: 61  -IQIRRRF-RLKIPSLKRLWRKRVRLVSSMRLSYAKVLKRFKDNKVHFGDLFAGNYLFMQ 113

Query: 121 VNPSSMKCLK 129
           VNPSS+K L+
Sbjct: 121 VNPSSLKYLE 113

BLAST of CSPI05G18040 vs. TrEMBL
Match: K7MX61_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.1e-17
Identity = 61/128 (47.66%), Postives = 84/128 (65.62%), Query Frame = 1

Query: 1   MADLETASAGKFRYRRLRYSEEFEEAFGRSREGGGEGIRKRWRRRRWWFRMRMRKGSSSL 60
           M+ L+    GK RY+RLR+            E G +G R+R  R R WFR R       +
Sbjct: 87  MSTLQMVPLGKLRYQRLRH------------EKGWDGERER--RPRSWFRFRR------V 146

Query: 61  SIGRRLKKLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRDGEAYLGDLFAGNYLFLQVN 120
            I RRL +L+I SLR+L R++ RLV++MR S AKV+KRF++G+ + GDLFAGNYLF+ VN
Sbjct: 147 PIRRRL-RLKISSLRRLWRKRARLVSSMRISYAKVLKRFKEGQVHFGDLFAGNYLFMHVN 193

Query: 121 PSSMKCLK 129
           P+S+KCL+
Sbjct: 207 PASLKCLE 193

BLAST of CSPI05G18040 vs. TrEMBL
Match: A0A0B2NXL2_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_039264 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.1e-17
Identity = 61/128 (47.66%), Postives = 84/128 (65.62%), Query Frame = 1

Query: 1   MADLETASAGKFRYRRLRYSEEFEEAFGRSREGGGEGIRKRWRRRRWWFRMRMRKGSSSL 60
           M+ L+    GK RY+RLR+            E G +G R+R  R R WFR R       +
Sbjct: 11  MSTLQMVPLGKLRYQRLRH------------EKGWDGERER--RPRSWFRFRR------V 70

Query: 61  SIGRRLKKLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRDGEAYLGDLFAGNYLFLQVN 120
            I RRL +L+I SLR+L R++ RLV++MR S AKV+KRF++G+ + GDLFAGNYLF+ VN
Sbjct: 71  PIRRRL-RLKISSLRRLWRKRARLVSSMRISYAKVLKRFKEGQVHFGDLFAGNYLFMHVN 117

Query: 121 PSSMKCLK 129
           P+S+KCL+
Sbjct: 131 PASLKCLE 117

BLAST of CSPI05G18040 vs. TrEMBL
Match: I1N7H1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G078800 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.1e-17
Identity = 61/128 (47.66%), Postives = 84/128 (65.62%), Query Frame = 1

Query: 1   MADLETASAGKFRYRRLRYSEEFEEAFGRSREGGGEGIRKRWRRRRWWFRMRMRKGSSSL 60
           M+ L+    GK RY+RLR+            E G +G R+R  R R WFR R       +
Sbjct: 11  MSTLQMVPLGKLRYQRLRH------------EKGWDGERER--RPRSWFRFRR------V 70

Query: 61  SIGRRLKKLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRDGEAYLGDLFAGNYLFLQVN 120
            I RRL +L+I SLR+L R++ RLV++MR S AKV+KRF++G+ + GDLFAGNYLF+ VN
Sbjct: 71  PIRRRL-RLKISSLRRLWRKRARLVSSMRISYAKVLKRFKEGQVHFGDLFAGNYLFMHVN 117

Query: 121 PSSMKCLK 129
           P+S+KCL+
Sbjct: 131 PASLKCLE 117

BLAST of CSPI05G18040 vs. TAIR10
Match: AT5G14410.1 (AT5G14410.1 unknown protein)

HSP 1 Score: 58.9 bits (141), Expect = 3.2e-09
Identity = 43/111 (38.74%), Postives = 66/111 (59.46%), Query Frame = 1

Query: 43  RRRRWWFRMRMRKGSSSLSIGRRLK-KLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRD 102
           RRR  ++  R ++   SL   RR++ +++I  LR  +R+K    N ++  I K++KR ++
Sbjct: 27  RRRSSFYSYRFKR-VVSLGGRRRIRVRVKIRRLRGFVRKK---ANRVKTGILKILKRLKE 86

Query: 103 GEAYLGDLFAGNYLFLQVNPSSMKC-LKNHHHHQQQHGFDVRNFPQTYSLP 152
            +++ GDLFAGNYLF+QVNPSS+          Q Q+G    NFP   SLP
Sbjct: 87  SQSHFGDLFAGNYLFMQVNPSSLNAKYVFDKSFQGQNG----NFPSRLSLP 129

BLAST of CSPI05G18040 vs. NCBI nr
Match: gi|778703543|ref|XP_011655383.1| (PREDICTED: uncharacterized protein LOC105435522 [Cucumis sativus])

HSP 1 Score: 310.1 bits (793), Expect = 2.2e-81
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1

Query: 1   MADLETASAGKFRYRRLRYSEEFEEAFGRSREGGGEGIRKRWRRRRWWFRMRMRKGSSSL 60
           MADLETASAGKFRYRRLRYSEEFEEAFGRSREGGGEGIRKRWRRRRWWFRMRMRKGSSSL
Sbjct: 1   MADLETASAGKFRYRRLRYSEEFEEAFGRSREGGGEGIRKRWRRRRWWFRMRMRKGSSSL 60

Query: 61  SIGRRLKKLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRDGEAYLGDLFAGNYLFLQVN 120
           SIGRRLKKLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRDGEAYLGDLFAGNYLFLQVN
Sbjct: 61  SIGRRLKKLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRDGEAYLGDLFAGNYLFLQVN 120

Query: 121 PSSMKCLKNHHHHQQQHGFDVRNFPQTYSLPSFI 155
           PSSMKCLKNHHHHQQQHGFDVRNFPQTYSLPSFI
Sbjct: 121 PSSMKCLKNHHHHQQQHGFDVRNFPQTYSLPSFI 154

BLAST of CSPI05G18040 vs. NCBI nr
Match: gi|388503220|gb|AFK39676.1| (unknown [Lotus japonicus])

HSP 1 Score: 98.2 bits (243), Expect = 1.3e-17
Identity = 62/130 (47.69%), Postives = 88/130 (67.69%), Query Frame = 1

Query: 1   MADLETASAGKFRYRRLRYSEEFEEAFGRSREGGGEGIRKRW--RRRRWWFRMRMRKGSS 60
           M++++ AS  KFRY+RL++            EGG E  R R   +R + WFR R R+   
Sbjct: 1   MSNIQIASVSKFRYQRLKH------------EGGYEIERDRVLIQRPKSWFRFRFRR--- 60

Query: 61  SLSIGRRLKKLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRDGEAYLGDLFAGNYLFLQ 120
            + I RR  +L+IPSL++L R++ RLV++MR S AKV+KRF+D + + GDLFAGNYLF+Q
Sbjct: 61  -IQIRRRF-RLKIPSLKRLWRKRVRLVSSMRLSYAKVLKRFKDNKVHFGDLFAGNYLFMQ 113

Query: 121 VNPSSMKCLK 129
           VNPSS+K L+
Sbjct: 121 VNPSSLKYLE 113

BLAST of CSPI05G18040 vs. NCBI nr
Match: gi|571555341|ref|XP_006604105.1| (PREDICTED: uncharacterized protein LOC102659553 [Glycine max])

HSP 1 Score: 97.1 bits (240), Expect = 3.0e-17
Identity = 61/128 (47.66%), Postives = 84/128 (65.62%), Query Frame = 1

Query: 1   MADLETASAGKFRYRRLRYSEEFEEAFGRSREGGGEGIRKRWRRRRWWFRMRMRKGSSSL 60
           M+ L+    GK RY+RLR+            E G +G R+R  R R WFR R       +
Sbjct: 87  MSTLQMVPLGKLRYQRLRH------------EKGWDGERER--RPRSWFRFRR------V 146

Query: 61  SIGRRLKKLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRDGEAYLGDLFAGNYLFLQVN 120
            I RRL +L+I SLR+L R++ RLV++MR S AKV+KRF++G+ + GDLFAGNYLF+ VN
Sbjct: 147 PIRRRL-RLKISSLRRLWRKRARLVSSMRISYAKVLKRFKEGQVHFGDLFAGNYLFMHVN 193

Query: 121 PSSMKCLK 129
           P+S+KCL+
Sbjct: 207 PASLKCLE 193

BLAST of CSPI05G18040 vs. NCBI nr
Match: gi|734311187|gb|KHN00034.1| (hypothetical protein glysoja_039264 [Glycine soja])

HSP 1 Score: 97.1 bits (240), Expect = 3.0e-17
Identity = 61/128 (47.66%), Postives = 84/128 (65.62%), Query Frame = 1

Query: 1   MADLETASAGKFRYRRLRYSEEFEEAFGRSREGGGEGIRKRWRRRRWWFRMRMRKGSSSL 60
           M+ L+    GK RY+RLR+            E G +G R+R  R R WFR R       +
Sbjct: 11  MSTLQMVPLGKLRYQRLRH------------EKGWDGERER--RPRSWFRFRR------V 70

Query: 61  SIGRRLKKLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRDGEAYLGDLFAGNYLFLQVN 120
            I RRL +L+I SLR+L R++ RLV++MR S AKV+KRF++G+ + GDLFAGNYLF+ VN
Sbjct: 71  PIRRRL-RLKISSLRRLWRKRARLVSSMRISYAKVLKRFKEGQVHFGDLFAGNYLFMHVN 117

Query: 121 PSSMKCLK 129
           P+S+KCL+
Sbjct: 131 PASLKCLE 117

BLAST of CSPI05G18040 vs. NCBI nr
Match: gi|947057694|gb|KRH07100.1| (hypothetical protein GLYMA_16G068200 [Glycine max])

HSP 1 Score: 94.0 bits (232), Expect = 2.5e-16
Identity = 56/127 (44.09%), Postives = 82/127 (64.57%), Query Frame = 1

Query: 2   ADLETASAGKFRYRRLRYSEEFEEAFGRSREGGGEGIRKRWRRRRWWFRMRMRKGSSSLS 61
           + L+     K RY+RLR+ + +++              +R RR R WFR R       + 
Sbjct: 13  SQLQMVPLSKLRYQRLRHEKGWDD--------------ERERRSRSWFRFRR------VP 72

Query: 62  IGRRLKKLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRDGEAYLGDLFAGNYLFLQVNP 121
           I RR  +L+IPSLR+L R++ RLV++MR S AKV+KRF++G+ + GDLFAGNYLF+ VNP
Sbjct: 73  IRRRF-RLKIPSLRRLWRKRARLVSSMRISYAKVMKRFKEGQVHFGDLFAGNYLFMHVNP 118

Query: 122 SSMKCLK 129
           +S+KCL+
Sbjct: 133 TSLKCLE 118

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KSD1_CUCSA1.6e-81100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517900 PE=4 SV=1[more]
I3SHD4_LOTJA9.3e-1847.69Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
K7MX61_SOYBN2.1e-1747.66Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
A0A0B2NXL2_GLYSO2.1e-1747.66Uncharacterized protein OS=Glycine soja GN=glysoja_039264 PE=4 SV=1[more]
I1N7H1_SOYBN2.1e-1747.66Uncharacterized protein OS=Glycine max GN=GLYMA_19G078800 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G14410.13.2e-0938.74 unknown protein[more]
Match NameE-valueIdentityDescription
gi|778703543|ref|XP_011655383.1|2.2e-81100.00PREDICTED: uncharacterized protein LOC105435522 [Cucumis sativus][more]
gi|388503220|gb|AFK39676.1|1.3e-1747.69unknown [Lotus japonicus][more]
gi|571555341|ref|XP_006604105.1|3.0e-1747.66PREDICTED: uncharacterized protein LOC102659553 [Glycine max][more]
gi|734311187|gb|KHN00034.1|3.0e-1747.66hypothetical protein glysoja_039264 [Glycine soja][more]
gi|947057694|gb|KRH07100.1|2.5e-1644.09hypothetical protein GLYMA_16G068200 [Glycine max][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006661 phosphatidylinositol biosynthetic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G18040.1CSPI05G18040.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36795FAMILY NOT NAMEDcoord: 1..127
score: 8.6
NoneNo IPR availablePANTHERPTHR36795:SF2SUBFAMILY NOT NAMEDcoord: 1..127
score: 8.6

The following gene(s) are paralogous to this gene:

None