CSPI05G18040 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAACAAATAAACTTTACTTTATTTTTTTTTCTCTCACAACAAATGCATGTGAATTTATTTTTGCATTAATAGAAAAAGCAAAATCCCAACTTCCCATTTCCCAGAATCATTAATGACCTAAACCCTAAATTTCTCAACTTCTCTCACTCTTCCTTTTTAAAATGCACTGTCAACTCTCTGTTTCCTTCTAAAACCCGCCATGGCGGACCTCGAAACCGCATCGGCTGGGAAATTCCGGTACCGGAGACTGAGGTACAGCGAGGAGTTTGAGGAGGCGTTTGGTCGATCTAGAGAAGGAGGAGGAGAAGGGATTAGGAAGAGATGGAGGCGGCGGCGGTGGTGGTTCAGAATGAGAATGAGAAAGGGTTCTTCTTCTTTGTCGATTGGGAGGAGGTTGAAGAAACTGAGAATCCCAAGCTTGAGGAAGCTGTTGAGGAGGAAATGGCGACTGGTGAATGCGATGAGAGGATCGATTGCGAAGGTAGTGAAGAGATTTAGAGATGGAGAAGCGTATTTGGGAGATCTTTTTGCTGGAAATTACTTGTTTCTTCAGGTTAATCCAAGCTCTATGAAATGCTTGAAGAATCATCATCATCATCAACAACAACATGGATTTGATGTTCGGAATTTCCCTCAAACTTATTCACTTCCAAGCTTTATCTAATTAGTAATCAGTATAGTTTGGTTTTCTTCTTAATTTCTCTTATAATTGTTGTGTTTTATGTGATTCCTCACTCCCTTTCGAAATTTGAATGTTAATTAATAATCAACCACTGATGAACTGAC ATGGCGGACCTCGAAACCGCATCGGCTGGGAAATTCCGGTACCGGAGACTGAGGTACAGCGAGGAGTTTGAGGAGGCGTTTGGTCGATCTAGAGAAGGAGGAGGAGAAGGGATTAGGAAGAGATGGAGGCGGCGGCGGTGGTGGTTCAGAATGAGAATGAGAAAGGGTTCTTCTTCTTTGTCGATTGGGAGGAGGTTGAAGAAACTGAGAATCCCAAGCTTGAGGAAGCTGTTGAGGAGGAAATGGCGACTGGTGAATGCGATGAGAGGATCGATTGCGAAGGTAGTGAAGAGATTTAGAGATGGAGAAGCGTATTTGGGAGATCTTTTTGCTGGAAATTACTTGTTTCTTCAGGTTAATCCAAGCTCTATGAAATGCTTGAAGAATCATCATCATCATCAACAACAACATGGATTTGATGTTCGGAATTTCCCTCAAACTTATTCACTTCCAAGCTTTATCTAA ATGGCGGACCTCGAAACCGCATCGGCTGGGAAATTCCGGTACCGGAGACTGAGGTACAGCGAGGAGTTTGAGGAGGCGTTTGGTCGATCTAGAGAAGGAGGAGGAGAAGGGATTAGGAAGAGATGGAGGCGGCGGCGGTGGTGGTTCAGAATGAGAATGAGAAAGGGTTCTTCTTCTTTGTCGATTGGGAGGAGGTTGAAGAAACTGAGAATCCCAAGCTTGAGGAAGCTGTTGAGGAGGAAATGGCGACTGGTGAATGCGATGAGAGGATCGATTGCGAAGGTAGTGAAGAGATTTAGAGATGGAGAAGCGTATTTGGGAGATCTTTTTGCTGGAAATTACTTGTTTCTTCAGGTTAATCCAAGCTCTATGAAATGCTTGAAGAATCATCATCATCATCAACAACAACATGGATTTGATGTTCGGAATTTCCCTCAAACTTATTCACTTCCAAGCTTTATCTAA
BLAST of CSPI05G18040 vs. TrEMBL
Match: A0A0A0KSD1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517900 PE=4 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 1.6e-81 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1
BLAST of CSPI05G18040 vs. TrEMBL
Match: I3SHD4_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 9.3e-18 Identity = 62/130 (47.69%), Postives = 88/130 (67.69%), Query Frame = 1
BLAST of CSPI05G18040 vs. TrEMBL
Match: K7MX61_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 2.1e-17 Identity = 61/128 (47.66%), Postives = 84/128 (65.62%), Query Frame = 1
BLAST of CSPI05G18040 vs. TrEMBL
Match: A0A0B2NXL2_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_039264 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 2.1e-17 Identity = 61/128 (47.66%), Postives = 84/128 (65.62%), Query Frame = 1
BLAST of CSPI05G18040 vs. TrEMBL
Match: I1N7H1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G078800 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 2.1e-17 Identity = 61/128 (47.66%), Postives = 84/128 (65.62%), Query Frame = 1
BLAST of CSPI05G18040 vs. TAIR10
Match: AT5G14410.1 (AT5G14410.1 unknown protein) HSP 1 Score: 58.9 bits (141), Expect = 3.2e-09 Identity = 43/111 (38.74%), Postives = 66/111 (59.46%), Query Frame = 1
BLAST of CSPI05G18040 vs. NCBI nr
Match: gi|778703543|ref|XP_011655383.1| (PREDICTED: uncharacterized protein LOC105435522 [Cucumis sativus]) HSP 1 Score: 310.1 bits (793), Expect = 2.2e-81 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1
BLAST of CSPI05G18040 vs. NCBI nr
Match: gi|388503220|gb|AFK39676.1| (unknown [Lotus japonicus]) HSP 1 Score: 98.2 bits (243), Expect = 1.3e-17 Identity = 62/130 (47.69%), Postives = 88/130 (67.69%), Query Frame = 1
BLAST of CSPI05G18040 vs. NCBI nr
Match: gi|571555341|ref|XP_006604105.1| (PREDICTED: uncharacterized protein LOC102659553 [Glycine max]) HSP 1 Score: 97.1 bits (240), Expect = 3.0e-17 Identity = 61/128 (47.66%), Postives = 84/128 (65.62%), Query Frame = 1
BLAST of CSPI05G18040 vs. NCBI nr
Match: gi|734311187|gb|KHN00034.1| (hypothetical protein glysoja_039264 [Glycine soja]) HSP 1 Score: 97.1 bits (240), Expect = 3.0e-17 Identity = 61/128 (47.66%), Postives = 84/128 (65.62%), Query Frame = 1
BLAST of CSPI05G18040 vs. NCBI nr
Match: gi|947057694|gb|KRH07100.1| (hypothetical protein GLYMA_16G068200 [Glycine max]) HSP 1 Score: 94.0 bits (232), Expect = 2.5e-16 Identity = 56/127 (44.09%), Postives = 82/127 (64.57%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |