Carg04474 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCCTCTCACTTCACTGCTTCTCTTCTCAAACTCAGCGAATCCGCCATGCCGGACCTCGACACAACCGCGCCGCCAGGCAAGTTCCGGTACCGGAGGCTGAGATACAGCGAGGAATTTGAGGAGGCGTTTGGAAGATCGAGGCGAGGAGAAGCGAGGAGGAGGAGGAGATTCGTCGGAAGATCGAAGCGGTGGTTCAGAATCAGAAGGGCTTCGATTGGGAGGAGGTTGAAGAAGCTCAGAGTTCCAAGCCTGAGAAAGCTGTTGAGAAGGAAATCGCGGCTGGTGACGGCCATGAGAGGCTCGATTGCGAAGGTTGTGAAGAGGTTTAGGGAAGGGGAAGCGTATTTGGGGGATCTTTTTGCTGGAAATTATTTGTTTCTTCAGGTGAATCCCAGCTCCATCAAATGCCATAAAAATCACCATTCTGCCCTTCAAAATTTCGCCCCAACTTATTCCCTCAACCTCTAA ATGCCCTCTCACTTCACTGCTTCTCTTCTCAAACTCAGCGAATCCGCCATGCCGGACCTCGACACAACCGCGCCGCCAGGCAAGTTCCGGTACCGGAGGCTGAGATACAGCGAGGAATTTGAGGAGGCGTTTGGAAGATCGAGGCGAGGAGAAGCGAGGAGGAGGAGGAGATTCGTCGGAAGATCGAAGCGGTGGTTCAGAATCAGAAGGGCTTCGATTGGGAGGAGGTTGAAGAAGCTCAGAGTTCCAAGCCTGAGAAAGCTGTTGAGAAGGAAATCGCGGCTGGTGACGGCCATGAGAGGCTCGATTGCGAAGGTTGTGAAGAGGTTTAGGGAAGGGGAAGCGTATTTGGGGGATCTTTTTGCTGGAAATTATTTGTTTCTTCAGGTGAATCCCAGCTCCATCAAATGCCATAAAAATCACCATTCTGCCCTTCAAAATTTCGCCCCAACTTATTCCCTCAACCTCTAA ATGCCCTCTCACTTCACTGCTTCTCTTCTCAAACTCAGCGAATCCGCCATGCCGGACCTCGACACAACCGCGCCGCCAGGCAAGTTCCGGTACCGGAGGCTGAGATACAGCGAGGAATTTGAGGAGGCGTTTGGAAGATCGAGGCGAGGAGAAGCGAGGAGGAGGAGGAGATTCGTCGGAAGATCGAAGCGGTGGTTCAGAATCAGAAGGGCTTCGATTGGGAGGAGGTTGAAGAAGCTCAGAGTTCCAAGCCTGAGAAAGCTGTTGAGAAGGAAATCGCGGCTGGTGACGGCCATGAGAGGCTCGATTGCGAAGGTTGTGAAGAGGTTTAGGGAAGGGGAAGCGTATTTGGGGGATCTTTTTGCTGGAAATTATTTGTTTCTTCAGGTGAATCCCAGCTCCATCAAATGCCATAAAAATCACCATTCTGCCCTTCAAAATTTCGCCCCAACTTATTCCCTCAACCTCTAA MPSHFTASLLKLSESAMPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEARRRRRFVGRSKRWFRIRRASIGRRLKKLRVPSLRKLLRRKSRLVTAMRGSIAKVVKRFREGEAYLGDLFAGNYLFLQVNPSSIKCHKNHHSALQNFAPTYSLNL
BLAST of Carg04474 vs. NCBI nr
Match: XP_022922294.1 (uncharacterized protein LOC111430312 [Cucurbita moschata]) HSP 1 Score: 299.7 bits (766), Expect = 5.9e-78 Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0
BLAST of Carg04474 vs. NCBI nr
Match: XP_023551709.1 (uncharacterized protein LOC111809563 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 255.8 bits (652), Expect = 9.8e-65 Identity = 136/140 (97.14%), Postives = 136/140 (97.14%), Query Frame = 0
BLAST of Carg04474 vs. NCBI nr
Match: XP_022990096.1 (uncharacterized protein LOC111487096 [Cucurbita maxima]) HSP 1 Score: 200.3 bits (508), Expect = 4.9e-48 Identity = 111/140 (79.29%), Postives = 113/140 (80.71%), Query Frame = 0
BLAST of Carg04474 vs. NCBI nr
Match: XP_022939385.1 (uncharacterized protein LOC111445317 [Cucurbita moschata]) HSP 1 Score: 168.7 bits (426), Expect = 1.6e-38 Identity = 101/143 (70.63%), Postives = 113/143 (79.02%), Query Frame = 0
BLAST of Carg04474 vs. NCBI nr
Match: XP_011655383.1 (PREDICTED: uncharacterized protein LOC105435522 [Cucumis sativus] >KGN51342.1 hypothetical protein Csa_5G517900 [Cucumis sativus]) HSP 1 Score: 163.7 bits (413), Expect = 5.0e-37 Identity = 103/151 (68.21%), Postives = 112/151 (74.17%), Query Frame = 0
BLAST of Carg04474 vs. TAIR10
Match: AT5G14410.1 (unknown protein) HSP 1 Score: 52.8 bits (125), Expect = 2.3e-07 Identity = 41/117 (35.04%), Postives = 68/117 (58.12%), Query Frame = 0
BLAST of Carg04474 vs. TrEMBL
Match: tr|A0A0A0KSD1|A0A0A0KSD1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517900 PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 3.3e-37 Identity = 103/151 (68.21%), Postives = 112/151 (74.17%), Query Frame = 0
BLAST of Carg04474 vs. TrEMBL
Match: tr|A0A1S4E272|A0A1S4E272_CUCME (uncharacterized protein LOC107991631 OS=Cucumis melo OX=3656 GN=LOC107991631 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.2e-34 Identity = 95/147 (64.63%), Postives = 103/147 (70.07%), Query Frame = 0
BLAST of Carg04474 vs. TrEMBL
Match: tr|I1N7H1|I1N7H1_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_19G078800 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 1.0e-17 Identity = 58/113 (51.33%), Postives = 79/113 (69.91%), Query Frame = 0
BLAST of Carg04474 vs. TrEMBL
Match: tr|A0A0B2NXL2|A0A0B2NXL2_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_039264 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 1.0e-17 Identity = 58/113 (51.33%), Postives = 79/113 (69.91%), Query Frame = 0
BLAST of Carg04474 vs. TrEMBL
Match: tr|I1MLS3|I1MLS3_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_16G068200 PE=4 SV=2) HSP 1 Score: 98.6 bits (244), Expect = 1.3e-17 Identity = 58/124 (46.77%), Postives = 82/124 (66.13%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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