Cucsa.011040 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.011040
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Mitochondrial inner membrane protease ATP23
Location	scaffold00154 : 369562 .. 372095 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTGAAACTTAGAGGCTTAAACATGGCGGAAGAATCCACGCCGGAACCTGGATCAAATCGTTCGTATTCTTCCGTCAACGGTGGCCGGACTAAGGAGGAATGCGAGGATATGATTCGAAGAAGTCTCCGAAGTATGAATTACAACTATATTCTTTCCTCTTCATTCGTTTCCTCAACATCTGGGACCCTAAACCCCAACATATTTTCGGGGTTTAGGGTTTTACGACTTTCCTTAATTTCCAGGTTATTTGAAAAATTAGAACTTCCTGTCTTGTTCTCACGGGTCATTCTATCTATTTCTGCGTCTCTCAGCTCCGATGGTGAAATTCTTGATGGAGCACTTGGAGAAATCTGGATGTGGGATTGGGGATAGGTTTATTAAGGCTGTTCATTGCGAGAAGCAGATCAGTGGTGGTTATGTTCGTGGTGAAGGGGTAATTATAATCTCCTCTCTTTGTTTCTGCATATGCTTTTAAATGAATACCTTACTTTTTACCTTATCGTTGAGAATGAATAAACAAAATTTGGATAGTTAGAAAAGGAATGGGGAGGAAGAGACTGTTGAACACTGATTTCTTTGCTGTGCCCTGTTTTTtGGTTTTAGATAATGGTGTGTAGTAACCACATGAACATTCAAGATGAGGTGAACCAAGTAGTAATTCATGAGCTTATTCATGCTTTTGATGATTGTCGAGCGGCAAACTTGGATTGGGCTAATTGTACTCATCATGCTTGCAGTGAGGTGTGCATCTACATTTAGCCATTTAACCATTTCCTTTCACAAATTGAGTCTTTTTtCCCCATATGTTTACATTATTTTGTTTTGGGACTTTCTAACGTACATACATTTGGAATTTAGATTCGTGCTGGACATTTAAGTGGTGATTGCCACTATAAACGGGAACTATTGCGAGGTTTCATGAAATTACGAGGCCATGAGCAAGTATGATTTTCTTTCACTTCCTTTTTGGAAAGAACATAATAGTCTTACCTCTTATTCGCGTCTAAATATGAGCATGAGTTTGTAGTCCATGATATCTCAAATTTGATTTCTTTGACACTGTTCATACCCTCTTGCTTAAATAGGTGAACAGCATTCATGAAAATGCTTAGAGTAGTGATAAATATTTGGCGTTGGATCAAGGACTAATGAACATGAATCACTTGGAAGTTGTAAATTTTTTtGTACCTTTTGAGCTAATTTCTTTGCACTCTGCTGATAGATAAGTTACACTTTTACGTTTCTCAAGTCTTTATGTTACACTAGAGAACTTTTCTCATGGTAGAACTTAAAATCTGCGTGTATGCTCATGCTAACTTGAATCTGATCTTGGAAATGAATATGATTGTATAAATGTTTTCAGTCATTCTATCTTTTAACTTTTGGCTTGTAATCTTTAGTCACAATAAGTATTTTTATGCTCAAGTATTCACATTTCCCTCGGCCCTCGGCTAAACTAGCTCAATTTTTTtATATCCGTAAGTGTTTGGACCAGCTTACGTGTACCTTGACTAATCTCACGGACAACCGATCTGACCTTACAACATTTGGGTATAAGGAAACTCCTAGGAAATTAATTCCTAGTAAGTGGCTACCATGAATTAAACTCATGACCTCTTAGTTAGTTTTCCTATTTATCACTAGGTTAATTCATGATGGTTTCTAAACTGAACAAGAGGAGTGAGAGTGAAAGTCCTATTTTTTGGATAGGAGAATGAAACATGATATTAGCAGGATCTTTTGGGAAGACTTATCTTGAAGCCATGTGTATTGAGTTCATTTCTGTTTTTtCTCAATGGCTAATATTTGGAAGAAGCCTAGGTTTATGCAACTCTAAAATTAAGAGGTGCAATTGGGGGACTATTATAAGTCGTTTTGGTTGTTATATGTAGGAGAGTGGCGATGGACCGGTGACCTAACCACGTGTGGATGTTTGATGATCAGCATTTTTTATTCTTTCTTCTAACAAAACCTGTTCTCACATTTTTCTTTTCTTCTTCATCCATGAACATTAGGTGAACTACATTCCATTGAGCTCTTTTGGATAGGTTTCCATTGACTTTTTTCTTTTCTATAGGAATGTGTGAGAAGAAGAGTCATGAAATCACTGGTGGCTAATCCTTACTGCCCAGAAGCTGCTGCAAAAGATGCCATGGAAGCTGTATGGGATGTTTGTTATAATGATACACAGCCATTTGATAGAGCTCCCTAAAACTTGGAATATAGTCATTTCATCAACCAAGAACAAAGCAGCCACTGCTCCTAATTTAATGGTGCTGTGCCAAAAAGAACAACAGGTTTTCTTCCCAAGTTTTAGATTGCTTAAATTTTGGAGAGAATTTATTTGCCTTGAGCAGTTCGATTACGATCGATGGTTTTATTCCATTATAGACATTCCCATTTTTGTTGCTTCTGATTCCATACCATTTATAATAGATAAACTTATTGCAGAATACATCTAAATGTGTTGAAGCAAATAAAACGTGATTTAGCTCCTCTTTTGAAAGTATGAGAAGTTTAACATTTGTGAA

mRNA sequence

AAATTGAAACTTAGAGGCTTAAACATGGCGGAAGAATCCACGCCGGAACCTGGATCAAATCGTTCGTATTCTTCCGTCAACGGTGGCCGGACTAAGGAGGAATGCGAGGATATGATTCGAAGAAGTCTCCGAACTCCGATGGTGAAATTCTTGATGGAGCACTTGGAGAAATCTGGATGTGGGATTGGGGATAGGTTTATTAAGGCTGTTCATTGCGAGAAGCAGATCAGTGGTGGTTATGTTCGTGGTGAAGGGATAATGGTGTGTAGTAACCACATGAACATTCAAGATGAGGTGAACCAAGTAGTAATTCATGAGCTTATTCATGCTTTTGATGATTGTCGAGCGGCAAACTTGGATTGGGCTAATTGTACTCATCATGCTTGCAGTGAGATTCGTGCTGGACATTTAAGTGGTGATTGCCACTATAAACGGGAACTATTGCGAGGTTTCATGAAATTACGAGGCCATGAGCAAGAATGTGTGAGAAGAAGAGTCATGAAATCACTGGTGGCTAATCCTTACTGCCCAGAAGCTGCTGCAAAAGATGCCATGGAAGCTGTATGGGATGTTTGTTATAATGATACACAGCCATTTGATAGAGCTCCCTAAAACTTGGAATATAGTCATTTCATCAACCAAGAACAAAGCAGCCACTGCTCCTAATTTAATGGTGCTGTGCCAAAAAGAACAACAGGTTTTCTTCCCAAGTTTTAGATTGCTTAAATTTTGGAGAGAATTTATTTGCCTTGAGCAGTTCGATTACGATCGATGGTTTTATTCCATTATAGACATTCCCATTTTTGTTGCTTCTGATTCCATACCATTTATAATAGATAAACTTATTGCAGAATACATCTAAATGTGTTGAAGCAAATAAAACGTGATTTAGCTCCTCTTTTGAAAGTATGAGAAGTTTAACATTTGTGAA

Coding sequence (CDS)

ATGGCGGAAGAATCCACGCCGGAACCTGGATCAAATCGTTCGTATTCTTCCGTCAACGGTGGCCGGACTAAGGAGGAATGCGAGGATATGATTCGAAGAAGTCTCCGAACTCCGATGGTGAAATTCTTGATGGAGCACTTGGAGAAATCTGGATGTGGGATTGGGGATAGGTTTATTAAGGCTGTTCATTGCGAGAAGCAGATCAGTGGTGGTTATGTTCGTGGTGAAGGGATAATGGTGTGTAGTAACCACATGAACATTCAAGATGAGGTGAACCAAGTAGTAATTCATGAGCTTATTCATGCTTTTGATGATTGTCGAGCGGCAAACTTGGATTGGGCTAATTGTACTCATCATGCTTGCAGTGAGATTCGTGCTGGACATTTAAGTGGTGATTGCCACTATAAACGGGAACTATTGCGAGGTTTCATGAAATTACGAGGCCATGAGCAAGAATGTGTGAGAAGAAGAGTCATGAAATCACTGGTGGCTAATCCTTACTGCCCAGAAGCTGCTGCAAAAGATGCCATGGAAGCTGTATGGGATGTTTGTTATAATGATACACAGCCATTTGATAGAGCTCCCTAA

Protein sequence

MAEESTPEPGSNRSYSSVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIKAVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHACSEIRAGHLSGDCHYKRELLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAVWDVCYNDTQPFDRAP*

Homology

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BLAST of Cucsa.011040 vs. Swiss-Prot
Match: ATP23_CRYNJ (Mitochondrial inner membrane protease ATP23 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=ATP23 PE=3 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 5.7e-34
Identity = 71/171 (41.52%), Postives = 103/171 (60.23%), Query Frame = 1


Query: 25  EECEDMIRRSLR-TPMVKFLMEHLEKSGCGIGDRFIKAVHCEKQISGGYVRGEGIMVCSN 84
           ++CE   R  +  +PM+ FL+ HL+ +GC      ++   C +  +GG+    GI++C +
Sbjct: 56  DKCEGWKRDLMNYSPMITFLLNHLKLAGCPFPSSAMQCHPCPENRAGGFSPDHGILLCQD 115

Query: 85  HMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHACSEIRAGHLSGDCHYKRELLRGF 144
               +  +   + HEL+HAFD CR   +DW N  HHACSEIRA +LSGDC + RE+ RGF
Sbjct: 116 RFFNKKHMEDTLAHELVHAFDHCRF-KVDWGNLRHHACSEIRAANLSGDCRFTREVKRGF 175

Query: 145 MKLRGHEQECVRRRVMKSLVANPYC--PEAAAKDAMEAVWDVCYNDTQPFD 193
                  Q CV+RR + S++ANP C  PE A K A+  VW+ C+ DT+PFD
Sbjct: 176 YAFNKQHQACVKRRAILSVLANPACTSPEMAEK-AVNEVWESCFTDTRPFD 224

[Close]

BLAST of Cucsa.011040 vs. Swiss-Prot
Match: ATP23_CRYNB (Mitochondrial inner membrane protease ATP23 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=ATP23 PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.3e-33
Identity = 70/171 (40.94%), Postives = 103/171 (60.23%), Query Frame = 1


Query: 25  EECEDMIRRSLR-TPMVKFLMEHLEKSGCGIGDRFIKAVHCEKQISGGYVRGEGIMVCSN 84
           ++CE   R  +  +PM+ FL+ HL+ +GC      ++   C +  +GG+    GI++C +
Sbjct: 56  DKCEGWKRDLMNYSPMITFLLNHLKLAGCPFPSSAMQCHPCPENRAGGFSPDHGILLCQD 115

Query: 85  HMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHACSEIRAGHLSGDCHYKRELLRGF 144
               +  +   + HEL+HAFD CR   +DW N  HHACSEIRA +LSGDC + RE+ RGF
Sbjct: 116 RFFNKKHMEDTLAHELVHAFDHCRF-KVDWGNLRHHACSEIRAANLSGDCRFTREVKRGF 175

Query: 145 MKLRGHEQECVRRRVMKSLVANPYC--PEAAAKDAMEAVWDVCYNDTQPFD 193
                  Q CV+RR + S++ANP C  PE A + A+  VW+ C+ DT+PFD
Sbjct: 176 YAFNKQHQACVKRRAILSVLANPACTSPEMAER-AVNEVWESCFTDTRPFD 224

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BLAST of Cucsa.011040 vs. Swiss-Prot
Match: ATP23_XENLA (Mitochondrial inner membrane protease ATP23 homolog OS=Xenopus laevis GN=atp23 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.0e-31
Identity = 73/174 (41.95%), Postives = 109/174 (62.64%), Query Frame = 1


Query: 26  ECEDMIRRSLRT-PMVKFLMEHLEKSGCGI-GDRFIKAVHCEKQISGGYVRGEG-IMVCS 85
           +C+ M++ +L T P  K L++ +++SGC +  DR      C+  +SGG+      I++C 
Sbjct: 40  KCQLMLKIALDTSPYAKLLLDAMKQSGCTVYKDRHFSCEECDGSVSGGFDAATSEIVLCQ 99

Query: 86  NHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHH-ACSEIRAGHLSGDCHYKRELLR 145
           N+++ Q  +N+VV HELIHAFD CR A++DW N   H ACSEIRA +LSGDC    EL R
Sbjct: 100 NNIHQQSHMNRVVTHELIHAFDHCR-AHVDWFNNVRHLACSEIRAANLSGDCTLANELTR 159

Query: 146 GFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAVWDVCYNDTQPFDRAP 196
               ++GH Q CVR R ++S++A        A+ A++ V+D C+ND +PF R P
Sbjct: 160 FKFGVKGHHQVCVRDRALRSILAVRNISRETAEKAVDEVFDSCFNDHEPFGRIP 212

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BLAST of Cucsa.011040 vs. Swiss-Prot
Match: ATP23_YARLI (Mitochondrial inner membrane protease ATP23 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=ATP23 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 5.9e-31
Identity = 66/159 (41.51%), Postives = 97/159 (61.01%), Query Frame = 1


Query: 37  TPMVKFLMEHLEKSGCGIGDRFIKAVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVI 96
           +P V+F+ + +EK G  I    +   HC+   +GG+    GI+VC NH+  +  +   + 
Sbjct: 90  SPTVRFMKDQIEKIGGDISSNNVFCDHCDDFKAGGFHPKYGILVCQNHVKSRSHLEDTLA 149

Query: 97  HELIHAFDDCRAANLDWANCTHHACSEIRAGHLSGDCHYKRELLRGFMK--LRGHEQECV 156
           HE++H +D+ +   +DW N  HHACSEIRA  LSG+C    EL++G +    RGH QEC 
Sbjct: 150 HEMVHYYDNTKF-KVDWMNLKHHACSEIRASTLSGECRMMNELMKGKLARLTRGH-QECA 209

Query: 157 RRRVMKSLVANPYC-PEAAAKDAMEAVWDVCYNDTQPFD 193
           +RR + S++ANP C  EA A   +  VWD C+NDT+PFD
Sbjct: 210 KRRAILSVMANPGCKDEAQATQVVNEVWDSCFNDTRPFD 246

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BLAST of Cucsa.011040 vs. Swiss-Prot
Match: ATP23_DANRE (Mitochondrial inner membrane protease ATP23 homolog OS=Danio rerio GN=atp23 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.3e-30
Identity = 79/195 (40.51%), Postives = 113/195 (57.95%), Query Frame = 1


Query: 7   PEPGSNRSYSSVNGG--RTKEECEDMIRRSLRT-PMVKFLMEHLEKSGCGI-GDRFIKAV 66
           PE GS    S+V       K +C+ M++ ++ T P  K L+  ++ SGC +  DR     
Sbjct: 38  PERGSRLKKSTVEESLFTFKHKCQLMLQFAMDTSPYAKLLLGAMKSSGCTVFKDRHFSCE 97

Query: 67  HCEKQISGGYVRGEG-IMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDW-ANCTHHA 126
            C+  +SGG+      I++C N+++ Q  +N+VV HELIHAFD CR A +DW +N  H A
Sbjct: 98  DCDGTVSGGFDAATSQIVLCQNNIHQQAHMNRVVTHELIHAFDHCR-AQVDWFSNYRHLA 157

Query: 127 CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAV 186
           CSEIRA +LSGDC +  E  R    LR H QECVR R ++S++A        A+  ++ V
Sbjct: 158 CSEIRAANLSGDCSFINEFSRFNFGLRKHHQECVRGRALRSILAVRRVSREEAERVVDEV 217

Query: 187 WDVCYNDTQPFDRAP 196
           +D C+ND  PF R P
Sbjct: 218 FDSCFNDHAPFGRIP 231

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BLAST of Cucsa.011040 vs. TrEMBL
Match: A0A0A0KSC7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517840 PE=4 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 5.7e-113
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 1


Query: 1   MAEESTPEPGSNRSYSSVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60
           MAEESTPEPGSNRSYSSVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK
Sbjct: 1   MAEESTPEPGSNRSYSSVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60

Query: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA 120
           AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA
Sbjct: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA 120

Query: 121 CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAV 180
           CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAV
Sbjct: 121 CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAV 180

Query: 181 WDVCYNDTQPFDRAP 196
           WDVCYNDTQPFDRAP
Sbjct: 181 WDVCYNDTQPFDRAP 195

[Close]

BLAST of Cucsa.011040 vs. TrEMBL
Match: M5WXF5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011801mg PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 3.0e-98
Identity = 165/195 (84.62%), Postives = 184/195 (94.36%), Query Frame = 1


Query: 1   MAEESTPEPGSNRSYSSVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60
           MA+E  PEPGS+   S+VNGG+T EEC+DMI+RSLR PMVKFL++HLE++GCGIGDRFIK
Sbjct: 1   MADEPAPEPGSSSFSSAVNGGKTLEECQDMIQRSLRIPMVKFLLKHLEQAGCGIGDRFIK 60

Query: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA 120
           AVHC+KQI+GGY RGEGI+VC NHMNIQDEVNQVVIHELIHAFDDCRAANL+WANC HHA
Sbjct: 61  AVHCDKQIAGGYARGEGILVCGNHMNIQDEVNQVVIHELIHAFDDCRAANLNWANCAHHA 120

Query: 121 CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAV 180
           CSEIRAGHLSGDCHYKRELLRGF+K+RGHEQ+CVRRRVMKS++ANPYC EAAAKDAMEAV
Sbjct: 121 CSEIRAGHLSGDCHYKRELLRGFVKIRGHEQDCVRRRVMKSVIANPYCSEAAAKDAMEAV 180

Query: 181 WDVCYNDTQPFDRAP 196
           WDVCYNDTQPFDRAP
Sbjct: 181 WDVCYNDTQPFDRAP 195

[Close]

BLAST of Cucsa.011040 vs. TrEMBL
Match: A0A067E9V3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029293mg PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 5.9e-94
Identity = 158/195 (81.03%), Postives = 179/195 (91.79%), Query Frame = 1


Query: 1   MAEESTPEPGSNRSYSSVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60
           M+EE  P+     S S+VNGGRT EEC+DMI+RSLR P VKFL +HLEK+GCG GD+FIK
Sbjct: 1   MSEEPAPKSIPESSSSAVNGGRTIEECQDMIQRSLRNPTVKFLRQHLEKAGCGFGDKFIK 60

Query: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA 120
           AVHC+K+I+GGYVRGEGI+VCSNHMNIQDEVNQV+IHELIHA+D+CRAANLDW+NC HHA
Sbjct: 61  AVHCDKKIAGGYVRGEGILVCSNHMNIQDEVNQVIIHELIHAYDECRAANLDWSNCAHHA 120

Query: 121 CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAV 180
           CSEIRAGHLSGDCHYKRELLRG+MK+RGHEQ+CVRRRVMKS++ANPYC  AAAKDAMEAV
Sbjct: 121 CSEIRAGHLSGDCHYKRELLRGYMKIRGHEQDCVRRRVMKSVIANPYCSAAAAKDAMEAV 180

Query: 181 WDVCYNDTQPFDRAP 196
           WDVCYNDTQPFDRAP
Sbjct: 181 WDVCYNDTQPFDRAP 195

[Close]

BLAST of Cucsa.011040 vs. TrEMBL
Match: V4THM4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016815mg PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 1.0e-93
Identity = 158/195 (81.03%), Postives = 178/195 (91.28%), Query Frame = 1


Query: 1   MAEESTPEPGSNRSYSSVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60
           M+EE  P+     S S+VNGGRT EEC+DMI+RSLR P VKFL +HLEK+GCG GD+FIK
Sbjct: 1   MSEEPAPKSIPESSSSAVNGGRTIEECQDMIQRSLRNPTVKFLRQHLEKAGCGFGDKFIK 60

Query: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA 120
           AVHC K+I+GGYVRGEGI+VCSNHMNIQDEVNQV+IHELIHA+D+CRAANLDW+NC HHA
Sbjct: 61  AVHCNKKIAGGYVRGEGILVCSNHMNIQDEVNQVIIHELIHAYDECRAANLDWSNCAHHA 120

Query: 121 CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAV 180
           CSEIRAGHLSGDCHYKRELLRG+MK+RGHEQ+CVRRRVMKS++ANPYC  AAAKDAMEAV
Sbjct: 121 CSEIRAGHLSGDCHYKRELLRGYMKIRGHEQDCVRRRVMKSVIANPYCSAAAAKDAMEAV 180

Query: 181 WDVCYNDTQPFDRAP 196
           WDVCYNDTQPFDRAP
Sbjct: 181 WDVCYNDTQPFDRAP 195

[Close]

BLAST of Cucsa.011040 vs. TrEMBL
Match: W9R362_9ROSA (Mitochondrial inner membrane protease ATP23 OS=Morus notabilis GN=L484_017764 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 1.0e-93
Identity = 158/195 (81.03%), Postives = 182/195 (93.33%), Query Frame = 1


Query: 1   MAEESTPEPGSNRSYSSVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60
           M +   PEPG++   ++VNGG+T  ECEDMIRRSLRTPMVKFL+E+LEKSGC IGD+FI+
Sbjct: 1   MEDVPAPEPGTS---TAVNGGKTIPECEDMIRRSLRTPMVKFLLENLEKSGCAIGDKFIR 60

Query: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA 120
           AVHC ++++GGYVRGEGI+VCSNHMNIQD+VNQVVIHELIHA+DDCRAANLDWANC HHA
Sbjct: 61  AVHCNRRLAGGYVRGEGIIVCSNHMNIQDDVNQVVIHELIHAYDDCRAANLDWANCAHHA 120

Query: 121 CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAV 180
           CSEIRAGHLSGDCHYKRELLRGF+K+RGHEQ+CVRRRVMKS++ANPYC EAAAKDAMEAV
Sbjct: 121 CSEIRAGHLSGDCHYKRELLRGFVKIRGHEQDCVRRRVMKSVIANPYCSEAAAKDAMEAV 180

Query: 181 WDVCYNDTQPFDRAP 196
           WD+CYNDT+PFDRAP
Sbjct: 181 WDICYNDTKPFDRAP 192

[Close]

BLAST of Cucsa.011040 vs. TAIR10
Match: AT3G03420.1 (AT3G03420.1 Ku70-binding family protein)

HSP 1 Score: 302.8 bits (774), Expect = 1.6e-82
Identity = 136/195 (69.74%), Postives = 160/195 (82.05%), Query Frame = 1


Query: 1   MAEESTPEPGSNRSYSSVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60
           M + + P  GS  +      G++ +EC+DMIRRS R P+VKFLME +EKSGC +GD F+K
Sbjct: 1   MEDAAAPNSGSEFN-PGARRGKSIDECQDMIRRSFRNPIVKFLMEQMEKSGCRVGDNFVK 60

Query: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA 120
           AV C   ++GGY +G GI VCSN++ IQDEVNQVVIHELIHA+D+CRA NLDW NC HHA
Sbjct: 61  AVVCTGPVAGGYTKGRGITVCSNYLTIQDEVNQVVIHELIHAYDECRAKNLDWTNCAHHA 120

Query: 121 CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAV 180
           CSEIRAGHLSGDCH+KRELLRGF+KLRGHEQEC++RRV+KSL  NPYC E AAKDAMEAV
Sbjct: 121 CSEIRAGHLSGDCHFKRELLRGFIKLRGHEQECIKRRVLKSLRGNPYCSEVAAKDAMEAV 180

Query: 181 WDVCYNDTQPFDRAP 196
           WD CYNDT+PFDRAP
Sbjct: 181 WDTCYNDTKPFDRAP 194

[Close]

BLAST of Cucsa.011040 vs. NCBI nr
Match: gi|778703521|ref|XP_011655379.1| (PREDICTED: mitochondrial inner membrane protease ATP23 [Cucumis sativus])

HSP 1 Score: 414.8 bits (1065), Expect = 8.1e-113
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 1


Query: 1   MAEESTPEPGSNRSYSSVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60
           MAEESTPEPGSNRSYSSVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK
Sbjct: 1   MAEESTPEPGSNRSYSSVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60

Query: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA 120
           AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA
Sbjct: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA 120

Query: 121 CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAV 180
           CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAV
Sbjct: 121 CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAV 180

Query: 181 WDVCYNDTQPFDRAP 196
           WDVCYNDTQPFDRAP
Sbjct: 181 WDVCYNDTQPFDRAP 195

[Close]

BLAST of Cucsa.011040 vs. NCBI nr
Match: gi|659117903|ref|XP_008458847.1| (PREDICTED: mitochondrial inner membrane protease ATP23 [Cucumis melo])

HSP 1 Score: 408.7 bits (1049), Expect = 5.8e-111
Identity = 191/195 (97.95%), Postives = 192/195 (98.46%), Query Frame = 1


Query: 1   MAEESTPEPGSNRSYSSVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60
           MAEESTPEPGSNRSYSSV GGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK
Sbjct: 1   MAEESTPEPGSNRSYSSVTGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60

Query: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA 120
           AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA
Sbjct: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA 120

Query: 121 CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAV 180
           CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQECVRRRVMKSL ANPYCPE AAKDAMEAV
Sbjct: 121 CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQECVRRRVMKSLTANPYCPEPAAKDAMEAV 180

Query: 181 WDVCYNDTQPFDRAP 196
           WD+CYNDTQPFDRAP
Sbjct: 181 WDICYNDTQPFDRAP 195

[Close]

BLAST of Cucsa.011040 vs. NCBI nr
Match: gi|595967299|ref|XP_007217268.1| (hypothetical protein PRUPE_ppa011801mg [Prunus persica])

HSP 1 Score: 365.9 bits (938), Expect = 4.3e-98
Identity = 165/195 (84.62%), Postives = 184/195 (94.36%), Query Frame = 1


Query: 1   MAEESTPEPGSNRSYSSVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60
           MA+E  PEPGS+   S+VNGG+T EEC+DMI+RSLR PMVKFL++HLE++GCGIGDRFIK
Sbjct: 1   MADEPAPEPGSSSFSSAVNGGKTLEECQDMIQRSLRIPMVKFLLKHLEQAGCGIGDRFIK 60

Query: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA 120
           AVHC+KQI+GGY RGEGI+VC NHMNIQDEVNQVVIHELIHAFDDCRAANL+WANC HHA
Sbjct: 61  AVHCDKQIAGGYARGEGILVCGNHMNIQDEVNQVVIHELIHAFDDCRAANLNWANCAHHA 120

Query: 121 CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAV 180
           CSEIRAGHLSGDCHYKRELLRGF+K+RGHEQ+CVRRRVMKS++ANPYC EAAAKDAMEAV
Sbjct: 121 CSEIRAGHLSGDCHYKRELLRGFVKIRGHEQDCVRRRVMKSVIANPYCSEAAAKDAMEAV 180

Query: 181 WDVCYNDTQPFDRAP 196
           WDVCYNDTQPFDRAP
Sbjct: 181 WDVCYNDTQPFDRAP 195

[Close]

BLAST of Cucsa.011040 vs. NCBI nr
Match: gi|645248855|ref|XP_008230483.1| (PREDICTED: mitochondrial inner membrane protease ATP23 [Prunus mume])

HSP 1 Score: 363.2 bits (931), Expect = 2.8e-97
Identity = 164/195 (84.10%), Postives = 183/195 (93.85%), Query Frame = 1


Query: 1   MAEESTPEPGSNRSYSSVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60
           MA+   PEPGS+   S+VNGG+T EEC+DMI+RSLR PMVKFL++HLE++GCGIGDRFIK
Sbjct: 1   MADGPAPEPGSSSFSSAVNGGKTLEECQDMIQRSLRIPMVKFLLKHLEQAGCGIGDRFIK 60

Query: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA 120
           AVHC+KQI+GGY RGEGI+VC NHMNIQDEVNQVVIHELIHAFDDCRAANL+WANC HHA
Sbjct: 61  AVHCDKQIAGGYARGEGILVCGNHMNIQDEVNQVVIHELIHAFDDCRAANLNWANCAHHA 120

Query: 121 CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAV 180
           CSEIRAGHLSGDCHYKRELLRGF+K+RGHEQ+CVRRRVMKS++ANPYC EAAAKDAMEAV
Sbjct: 121 CSEIRAGHLSGDCHYKRELLRGFVKIRGHEQDCVRRRVMKSVIANPYCSEAAAKDAMEAV 180

Query: 181 WDVCYNDTQPFDRAP 196
           WDVCYNDTQPFDRAP
Sbjct: 181 WDVCYNDTQPFDRAP 195

[Close]

BLAST of Cucsa.011040 vs. NCBI nr
Match: gi|1009159174|ref|XP_015897671.1| (PREDICTED: mitochondrial inner membrane protease ATP23 [Ziziphus jujuba])

HSP 1 Score: 362.5 bits (929), Expect = 4.8e-97
Identity = 164/195 (84.10%), Postives = 182/195 (93.33%), Query Frame = 1


Query: 1   MAEESTPEPGSNRSYSSVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60
           MAEE  PEPGS    ++VNGG+T EECEDMI+RSLRTPMVKFL+EHL+KSGC +GD+FIK
Sbjct: 1   MAEEPGPEPGSGTFSNAVNGGKTVEECEDMIQRSLRTPMVKFLLEHLQKSGCVVGDKFIK 60

Query: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA 120
           AV+C+KQI+GGYVRGEGIMVCSNHMN QD+VNQVV HELIHAFDDCRA NLDWANC HHA
Sbjct: 61  AVNCDKQIAGGYVRGEGIMVCSNHMNFQDDVNQVVTHELIHAFDDCRAKNLDWANCAHHA 120

Query: 121 CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAV 180
           CSEIRAGHLSGDCHYKRELLRGF+K+RGHEQ+CVRRRVMKS++ANPYC EAAAKDAMEAV
Sbjct: 121 CSEIRAGHLSGDCHYKRELLRGFLKMRGHEQDCVRRRVMKSVMANPYCSEAAAKDAMEAV 180

Query: 181 WDVCYNDTQPFDRAP 196
           WD+CYNDTQPFDRAP
Sbjct: 181 WDICYNDTQPFDRAP 195

The following BLAST results are available for this feature:

BLAST of Cucsa.011040 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATP23_CRYNJ	5.7e-34	41.52	Mitochondrial inner membrane protease ATP23 OS=Cryptococcus neoformans var. neof...	[more]
ATP23_CRYNB	1.3e-33	40.94	Mitochondrial inner membrane protease ATP23 OS=Cryptococcus neoformans var. neof...	[more]
ATP23_XENLA	2.0e-31	41.95	Mitochondrial inner membrane protease ATP23 homolog OS=Xenopus laevis GN=atp23 P...	[more]
ATP23_YARLI	5.9e-31	41.51	Mitochondrial inner membrane protease ATP23 OS=Yarrowia lipolytica (strain CLIB ...	[more]
ATP23_DANRE	1.3e-30	40.51	Mitochondrial inner membrane protease ATP23 homolog OS=Danio rerio GN=atp23 PE=2...	[more]

BLAST of Cucsa.011040 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSC7_CUCSA	5.7e-113	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517840 PE=4 SV=1	[more]
M5WXF5_PRUPE	3.0e-98	84.62	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011801mg PE=4 SV=1	[more]
A0A067E9V3_CITSI	5.9e-94	81.03	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029293mg PE=4 SV=1	[more]
V4THM4_9ROSI	1.0e-93	81.03	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016815mg PE=4 SV=1	[more]
W9R362_9ROSA	1.0e-93	81.03	Mitochondrial inner membrane protease ATP23 OS=Morus notabilis GN=L484_017764 PE...	[more]

BLAST of Cucsa.011040 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G03420.1	1.6e-82	69.74	Ku70-binding family protein	[more]

BLAST of Cucsa.011040 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778703521\|ref\|XP_011655379.1\|	8.1e-113	100.00	PREDICTED: mitochondrial inner membrane protease ATP23 [Cucumis sativus]	[more]
gi\|659117903\|ref\|XP_008458847.1\|	5.8e-111	97.95	PREDICTED: mitochondrial inner membrane protease ATP23 [Cucumis melo]	[more]
gi\|595967299\|ref\|XP_007217268.1\|	4.3e-98	84.62	hypothetical protein PRUPE_ppa011801mg [Prunus persica]	[more]
gi\|645248855\|ref\|XP_008230483.1\|	2.8e-97	84.10	PREDICTED: mitochondrial inner membrane protease ATP23 [Prunus mume]	[more]
gi\|1009159174\|ref\|XP_015897671.1\|	4.8e-97	84.10	PREDICTED: mitochondrial inner membrane protease ATP23 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR019165	Peptidase_M76_ATP23
IPR019165	Peptidase_M76_ATP23
IPR019165	Peptidase_M76_ATP23

Vocabulary: **Molecular Function**
Term	Definition
GO:0004222	metalloendopeptidase activity
GO:0004222	metalloendopeptidase activity
GO:0004222	metalloendopeptidase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004222	metalloendopeptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.011040.1	Cucsa.011040.1	mRNA
Cucsa.011040.2	Cucsa.011040.2	mRNA
Cucsa.011040.3	Cucsa.011040.3	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019165	Peptidase M76, ATP23	PFAM	PF09768	Peptidase_M76	coord: 1..114 score: 4.5
None	No IPR available	PANTHER	PTHR21711	KUB3-PROV PROTEIN	coord: 1..117 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.011040	Cla004640	Watermelon (97103) v1	cgywmB359
Cucsa.011040	Csa5G517840	Cucumber (Chinese Long) v2	cgycuB286
Cucsa.011040	MELO3C021605	Melon (DHL92) v3.5.1	cgymeB336
Cucsa.011040	ClCG09G019490	Watermelon (Charleston Gray)	cgywcgB338
Cucsa.011040	CSPI05G17980	Wild cucumber (PI 183967)	cgycpiB296
Cucsa.011040	CmaCh15G003710	Cucurbita maxima (Rimu)	cgycmaB0542
Cucsa.011040	CmaCh04G026650	Cucurbita maxima (Rimu)	cgycmaB0543
Cucsa.011040	CmoCh04G027930	Cucurbita moschata (Rifu)	cgycmoB0544
Cucsa.011040	CmoCh15G003830	Cucurbita moschata (Rifu)	cgycmoB0543
Cucsa.011040	Lsi02G016110	Bottle gourd (USVL1VR-Ls)	cgylsiB318
Cucsa.011040	Cp4.1LG01g23620	Cucurbita pepo (Zucchini)	cgycpeB0522
Cucsa.011040	MELO3C021605.2	Melon (DHL92) v3.6.1	cgymedB331
Cucsa.011040	CsaV3_5G026890	Cucumber (Chinese Long) v3	cgycucB300
Cucsa.011040	Cla97C09G180930	Watermelon (97103) v2	cgywmbB348
Cucsa.011040	Bhi06G000497	Wax gourd	cgywgoB388
Cucsa.011040	Carg04479	Silver-seed gourd	carcgyB0766

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.011040	Cucurbita pepo (Zucchini)	cgycpeB0519
Cucsa.011040	Cucurbita pepo (Zucchini)	cgycpeB0526
Cucsa.011040	Silver-seed gourd	carcgyB0315