CmoCh15G003830 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACAATGGCGGGAGGGAAATTCAGTTTAATATAATTTTATATAATATAGTGTGAATTTGAAAAATATATAATATACATATTATATACAAATGGATCTATCGGTTCACGAAACCGACCCGGATGATGACGCGAACCCATTACCCATTTGTAGATGGGGCTGCATCAACCGCCAAGAAATTGAAACTAGAAACTGAAACATGGATCAAATCGCTGGTGTTCTGCCGTCAACGGTGCCGGACTAAGGAGGAATGCGAGGACACGATTCGAAGAAATCTCCGAAGTATGAACAACAAATAAATTGTTTCCTGTTTAATTCGTTTATTCTAATGCTTTTTTAGCAGTTCTCTACTACCGAAATGTCTGTTCTAGGTCTGTATTTTTTCCCTCAATGGATTATTGAATCTATTCCTGCGTGCCTCAGCTCCGATGATGAAGTTCTTGATAGAGCATTTGGAGAAATCCGGATGTGGAATCGGGGATAAGTTCATTAAGAATTCTTCTCATGGTAGAACTTCAAATCTCTGTGTACGCTCATGCTAACTTGAATCTGATCTTGGCAATGATTTCTGGAGGAGTGTGTGAGGAGAAGAGTGATGAAATCAGTGGCTGCTAATCCTTACTGCTCAGAAGCTGCTGCAAAAGATGCCATGGAAGCTGTCTGGGATGTTTGTTATAATGATACACAGCCATTTGATAGATCTCCCTGA ACAATGGCGGGAGGGAAATTCAGTTTAATATAATTTTATATAATATAGTGTGAATTTGAAAAATATATAATATACATATTATATACAAATGGATCTATCGGTTCACGAAACCGACCCGGATGATGACGCGAACCCATTACCCATTTGTAGATGGGGCTGCATCAACCGCCAAGAAATTGAAACTAGAAACTGAAACATGGATCAAATCGCTGGTGTTCTGCCGTCAACGGTGCCGGACTAAGGAGGAATGCGAGGACACGATTCGAAGAAATCTCCGAACTCCGATGATGAAGTTCTTGATAGAGCATTTGGAGAAATCCGGATGTGGAATCGGGGATAAGTTCATTAAGAATTCTTCTCATGGTAGAACTTCAAATCTCTGTGAGTGTGTGAGGAGAAGAGTGATGAAATCAGTGGCTGCTAATCCTTACTGCTCAGAAGCTGCTGCAAAAGATGCCATGGAAGCTGTCTGGGATGTTTGTTATAATGATACACAGCCATTTGATAGATCTCCCTGA ATGATGACGCGAACCCATTACCCATTTGTAGATGGGGCTGCATCAACCGCCAAGAAATTGAAACTAGAAACTGAAACATGGATCAAATCGCTGGTGTTCTGCCGTCAACGGTGCCGGACTAAGGAGGAATGCGAGGACACGATTCGAAGAAATCTCCGAACTCCGATGATGAAGTTCTTGATAGAGCATTTGGAGAAATCCGGATGTGGAATCGGGGATAAGTTCATTAAGAATTCTTCTCATGGTAGAACTTCAAATCTCTGTGAGTGTGTGAGGAGAAGAGTGATGAAATCAGTGGCTGCTAATCCTTACTGCTCAGAAGCTGCTGCAAAAGATGCCATGGAAGCTGTCTGGGATGTTTGTTATAATGATACACAGCCATTTGATAGATCTCCCTGA
BLAST of CmoCh15G003830 vs. Swiss-Prot
Match: ATP23_ASHGO (Mitochondrial inner membrane protease ATP23 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ATP23 PE=3 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.4e-07 Identity = 37/119 (31.09%), Postives = 58/119 (48.74%), Query Frame = 1
BLAST of CmoCh15G003830 vs. Swiss-Prot
Match: ATP23_LODEL (Mitochondrial inner membrane protease ATP23 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=ATP23 PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 4.0e-07 Identity = 36/117 (30.77%), Postives = 53/117 (45.30%), Query Frame = 1
BLAST of CmoCh15G003830 vs. Swiss-Prot
Match: ATP23_ASPOR (Mitochondrial inner membrane protease atp23 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=atp23 PE=3 SV=2) HSP 1 Score: 53.1 bits (126), Expect = 2.6e-06 Identity = 33/106 (31.13%), Postives = 48/106 (45.28%), Query Frame = 1
BLAST of CmoCh15G003830 vs. Swiss-Prot
Match: ATP23_PICGU (Mitochondrial inner membrane protease ATP23 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=ATP23 PE=3 SV=2) HSP 1 Score: 52.8 bits (125), Expect = 3.4e-06 Identity = 29/73 (39.73%), Postives = 42/73 (57.53%), Query Frame = 1
BLAST of CmoCh15G003830 vs. Swiss-Prot
Match: ATP23_SCLS1 (Mitochondrial inner membrane protease atp23 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=atp23 PE=3 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 4.5e-06 Identity = 25/57 (43.86%), Postives = 35/57 (61.40%), Query Frame = 1
BLAST of CmoCh15G003830 vs. TrEMBL
Match: M1AUF2_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400011703 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.0e-25 Identity = 66/127 (51.97%), Postives = 77/127 (60.63%), Query Frame = 1
BLAST of CmoCh15G003830 vs. TrEMBL
Match: M5WXF5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011801mg PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 3.3e-16 Identity = 44/58 (75.86%), Postives = 48/58 (82.76%), Query Frame = 1
BLAST of CmoCh15G003830 vs. TrEMBL
Match: D7SPY5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0219g00250 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 4.3e-16 Identity = 43/58 (74.14%), Postives = 49/58 (84.48%), Query Frame = 1
BLAST of CmoCh15G003830 vs. TrEMBL
Match: B9SLT5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0531760 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 9.6e-16 Identity = 40/44 (90.91%), Postives = 43/44 (97.73%), Query Frame = 1
BLAST of CmoCh15G003830 vs. TrEMBL
Match: A0A0A0KSC7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517840 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 9.6e-16 Identity = 40/44 (90.91%), Postives = 42/44 (95.45%), Query Frame = 1
BLAST of CmoCh15G003830 vs. TAIR10
Match: AT3G03420.1 (AT3G03420.1 Ku70-binding family protein) HSP 1 Score: 84.3 bits (207), Expect = 6.0e-17 Identity = 38/58 (65.52%), Postives = 45/58 (77.59%), Query Frame = 1
BLAST of CmoCh15G003830 vs. NCBI nr
Match: gi|729377715|ref|XP_010549760.1| (PREDICTED: mitochondrial inner membrane protease ATP23 isoform X2 [Tarenaya hassleriana]) HSP 1 Score: 105.9 bits (263), Expect = 5.4e-20 Identity = 56/131 (42.75%), Postives = 75/131 (57.25%), Query Frame = 1
BLAST of CmoCh15G003830 vs. NCBI nr
Match: gi|645248855|ref|XP_008230483.1| (PREDICTED: mitochondrial inner membrane protease ATP23 [Prunus mume]) HSP 1 Score: 92.8 bits (229), Expect = 4.8e-16 Identity = 44/58 (75.86%), Postives = 48/58 (82.76%), Query Frame = 1
BLAST of CmoCh15G003830 vs. NCBI nr
Match: gi|595967299|ref|XP_007217268.1| (hypothetical protein PRUPE_ppa011801mg [Prunus persica]) HSP 1 Score: 92.8 bits (229), Expect = 4.8e-16 Identity = 44/58 (75.86%), Postives = 48/58 (82.76%), Query Frame = 1
BLAST of CmoCh15G003830 vs. NCBI nr
Match: gi|1009159174|ref|XP_015897671.1| (PREDICTED: mitochondrial inner membrane protease ATP23 [Ziziphus jujuba]) HSP 1 Score: 92.4 bits (228), Expect = 6.2e-16 Identity = 43/58 (74.14%), Postives = 48/58 (82.76%), Query Frame = 1
BLAST of CmoCh15G003830 vs. NCBI nr
Match: gi|225452246|ref|XP_002269112.1| (PREDICTED: mitochondrial inner membrane protease ATP23 homolog [Vitis vinifera]) HSP 1 Score: 92.4 bits (228), Expect = 6.2e-16 Identity = 43/58 (74.14%), Postives = 49/58 (84.48%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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