Cp4.1LG01g23620 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g23620
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Mitochondrial inner membrane protease ATP23
Location	Cp4.1LG01 : 19499647 .. 19502541 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGAGGAGAAGCAATTGGCGGGCCATTAATGCTGAATCGGTAAAGAGATGAGGAGAATCGAAGAGAAAAAGAGAGGAAGTTTTATTTAAATAGGATTCTGAAGGTCGCAGAAATCCTCTGTAAGGTATATGGAGAAAGACTGCAACACCAGAGAATGAGTTTGAAGGAGGGAAGGGGAAGAGTATTTAAAGGACTTCAGGGCCCAACGGCGGAGGATTCAGTTTTGGGTTCAGAGGCTCGCCGGATTTGCCGGATTTCGCCATTTTCAGTTGGGATCTCTTCCCTACAATGGCGGGAGAGGGAAAATAGTTTAATCTTAAAAAAATCAATTTTTAGTTCTAGATCATATCGATTTTGATCGTGGCTTTATGATTTCTTTAATTGAACCCGGTTTCTCCTGGTTCGAGTTCAGTGAAAAACCCATGATGCGAACCGTTGTTCGTACAAAACCCCGAAACCCGCTTGTAGATAGTGCTGCAGCGACGCCGTGTTGACACTTGAAACTAAGAAGAATGGCGGAAGAATCCACCCCGGAACCTGGATCGAATCGCTTGTATTCTGCCGTCAACGGCGGCCGGACGAAGGAAGAATGCGAGGATATGATTCGAAGAAGTCTCCGAAGTATGAACAACAAATCATTTGTTTCCTGTTCTACTCGTCTCCTCAAAATTTGGAACCCGCGTATAAAATTGCAGGGTTTAGGGTTTTGCGACTTTTGTTTATTTGCTGAAAATTTGAAAATTAGAGCTCTCTTTTGTTTTTCTCGCACCTTCTTCACCGTTCTCTGCGACTCAAATGGGTCAAAATGATTGTACTTCTGTGTCTCTCAGCTCCGATGGTGAAATTCTTGATGGAGCATTTGGAGAAATCTGGATGTGGGATTGGGGATAAGTTTATTAAGGCTGTTCATTGCGATAAGCAGATCAGTGGTGGCTATGTTCGTGGTGAAGGGGTAATACTCATTATACTTTCCTCTCTTTGTTTCTGCTTATGGTTTGTTGATGAATTTGGATCTGGATGAGAATGTTGAAGACTGATTTCTTTATTGTGTCTACTTTCTTGCTTGTAGATAATGGTGTGTAGGAATCATATGAACATTCAAGATGAGGTTAACCAAGTTGTAATTCATGAGCTTATTCATGCTTTTGATGATTGTCGTGCGGCAAACTTGGATTGGGCTAATTGTGCACATCATGCTTGCAGTGAGGTATGAATCTGCAAATAGCCAGTTTTTTCCCAGATTGAGTTTCTTTTGTTCTGGTTTCCTTCTGGTAATTTTCTAACACATGTATTTGGAATTTAGATTCGAGCTGGTCATCTAAGTGGTGATTGCCACTATAAACGAGAACTACTGCGAGGTTTTGTCAAATTACGAGGACACGAGCAAGTATGATTTCTAGAAAATTGTAGTTTAATTCTCTTGTTGGCATCTAAAAATGAGTATAAGTTTCATCCTTCATGTTTGAGATTTTTGAATTTCTGACATTGTTCATAGCCTCTTGCTTAAAAAGGTGAAAAAACATCCATGAAGTGTGCTTAGAGTAATTATAAATATATTCTCAGCGGATCAAGGACTAATGAACATGAACCACAGGACAGTTGAAAAGTTTTAGTGTTCTCTACTGATAGATTAGTTATATGATTAACAACTTAACATGTCCCATGTTATTGTGTTACATTAAAGAACTTTTTTCATGATAGAATCTAAAATCTCTGTGTATGCTCATGTCAACTTGAAGCTGATCTTGGCCATGAATATAGTTGATTTAACCATTCTTTCTTGTAACTTTTCGCTGATAATCGCTCTTGGCAATGGATTTTTTTGTGCTTAAGAATTTGCTTTTCCCTCAGCCCTTTGCTAAACTAGCTTATATATGAACAGTGAGAGTAAAAGTTCTTCATGAAAGAAACATAATACTAACAGAACATTTTAGGAAGGCTCTAATCTTGAAGTCATGTGATTGCATTCGTTTCTTTCTTTCCTTACTGGCCAATATTTCTAAGAGATCTAGGTTTGTTCAACCCTGAATGTATGGCTGCAATTGGGGGCCATTGTAACTTTTCTCACAGTCCTAGGAAAAAAACAAAACTCTTCTCGATGTAGATGTCGGTGAGGATATGATCGAAGGCGATGCACTAATGATTGAACAACCTGTGCATGTGTGATATGATACAAACCAGCATTTCATTTTCTTTTTGTCAACAATATTATTACCCTACTCTCGCTCGGATTCTTTTTCTTCTTGGTGCATTTCTGTTGGGCTCTTTCGGTTCGCTATTTGTTGACATTCTTTTCTCAATTTGTGAAGGAGTGTGTGAGAAGAAGAGTGATGAAATCAGTGATTGCTAATCCTTATTGCTCGGAAGCTGCTGCAAGGGATGCCATGGAATCTGTCTGGGATGTTTGTTATAATGATACACAACCATTTGATAGAGCTCCCTGAACAAATGGAACATTGTAATGTCCTCTGCAGAGAACAAAGCAGCCACTGCTCCTATTTTAATGGTGCTGTGCCCAAAAGAGACAGGTTTTTTTGCCCAAAATTTGGATTCCATAAACTATAGAGTAAGTTCATTGTCACAAGCAGTTCGATCAATTACACGAACGATCGATGATTTTATTCGGATACAGACATTCTCATTTTTTGCTTGCATCTGTTCCAATACCCTTTTCATATTGATAACCTTATTGTATAATACTTCTAAATTACCATATTAATTGGTTAGCTATGTCCGTGTGAAAACAGTATTCTCTTATTCATTTTAACCATTGTATGGATAAGATGAAGATAGTTGGAAGACAGCATAGTTTTAAGGTCCCCTCCCATTAAATCTTGTTGCTCTTGTGTCTTTCATCCTTAGTGGCAATGGCAATGGCAATGGCAAGTGGAATAA

mRNA sequence

GCGAGGAGAAGCAATTGGCGGGCCATTAATGCTGAATCGGTAAAGAGATGAGGAGAATCGAAGAGAAAAAGAGAGGAAGTTTTATTTAAATAGGATTCTGAAGGTCGCAGAAATCCTCTGTAAGGTATATGGAGAAAGACTGCAACACCAGAGAATGAGTTTGAAGGAGGGAAGGGGAAGAGTATTTAAAGGACTTCAGGGCCCAACGGCGGAGGATTCAGTTTTGGGTTCAGAGGCTCGCCGGATTTGCCGGATTTCGCCATTTTCAGTTGGGATCTCTTCCCTACAATGGCGGGAGAGGGAAAATAGTTTAATCTTAAAAAAATCAATTTTTAGTTCTAGATCATATCGATTTTGATCGTGGCTTTATGATTTCTTTAATTGAACCCGGTTTCTCCTGGTTCGAGTTCAGTGAAAAACCCATGATGCGAACCGTTGTTCGTACAAAACCCCGAAACCCGCTTGTAGATAGTGCTGCAGCGACGCCGTGTTGACACTTGAAACTAAGAAGAATGGCGGAAGAATCCACCCCGGAACCTGGATCGAATCGCTTGTATTCTGCCGTCAACGGCGGCCGGACGAAGGAAGAATGCGAGGATATGATTCGAAGAAGTCTCCGAACTCCGATGGTGAAATTCTTGATGGAGCATTTGGAGAAATCTGGATGTGGGATTGGGGATAAGTTTATTAAGGCTGTTCATTGCGATAAGCAGATCAGTGGTGGCTATGTTCGTGGTGAAGGGATAATGGTGTGTAGGAATCATATGAACATTCAAGATGAGGTTAACCAAGTTGTAATTCATGAGCTTATTCATGCTTTTGATGATTGTCGTGCGGCAAACTTGGATTGGGCTAATTGTGCACATCATGCTTGCAGTGAGATTCGAGCTGGTCATCTAAGTGGTGATTGCCACTATAAACGAGAACTACTGCGAGGTTTTGTCAAATTACGAGGACACGAGCAAGAGTGTGTGAGAAGAAGAGTGATGAAATCAGTGATTGCTAATCCTTATTGCTCGGAAGCTGCTGCAAGGGATGCCATGGAATCTGTCTGGGATGTTTGTTATAATGATACACAACCATTTGATAGAGCTCCCTGAACAAATGGAACATTGTAATGTCCTCTGCAGAGAACAAAGCAGCCACTGCTCCTATTTTAATGGTGCTGTGCCCAAAAGAGACAGGTTTTTTTGCCCAAAATTTGGATTCCATAAACTATAGAGTAAGTTCATTGTCACAAGCAGTTCGATCAATTACACGAACGATCGATGATTTTATTCGGATACAGACATTCTCATTTTTTGCTTGCATCTGTTCCAATACCCTTTTCATATTGATAACCTTATTGTATAATACTTCTAAATTACCATATTAATTGGTTAGCTATGTCCGTGTGAAAACAGTATTCTCTTATTCATTTTAACCATTGTATGGATAAGATGAAGATAGTTGGAAGACAGCATAGTTTTAAGGTCCCCTCCCATTAAATCTTGTTGCTCTTGTGTCTTTCATCCTTAGTGGCAATGGCAATGGCAATGGCAAGTGGAATAA

Coding sequence (CDS)

ATGGCGGAAGAATCCACCCCGGAACCTGGATCGAATCGCTTGTATTCTGCCGTCAACGGCGGCCGGACGAAGGAAGAATGCGAGGATATGATTCGAAGAAGTCTCCGAACTCCGATGGTGAAATTCTTGATGGAGCATTTGGAGAAATCTGGATGTGGGATTGGGGATAAGTTTATTAAGGCTGTTCATTGCGATAAGCAGATCAGTGGTGGCTATGTTCGTGGTGAAGGGATAATGGTGTGTAGGAATCATATGAACATTCAAGATGAGGTTAACCAAGTTGTAATTCATGAGCTTATTCATGCTTTTGATGATTGTCGTGCGGCAAACTTGGATTGGGCTAATTGTGCACATCATGCTTGCAGTGAGATTCGAGCTGGTCATCTAAGTGGTGATTGCCACTATAAACGAGAACTACTGCGAGGTTTTGTCAAATTACGAGGACACGAGCAAGAGTGTGTGAGAAGAAGAGTGATGAAATCAGTGATTGCTAATCCTTATTGCTCGGAAGCTGCTGCAAGGGATGCCATGGAATCTGTCTGGGATGTTTGTTATAATGATACACAACCATTTGATAGAGCTCCCTGA

Protein sequence

MAEESTPEPGSNRLYSAVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDKFIKAVHCDKQISGGYVRGEGIMVCRNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCAHHACSEIRAGHLSGDCHYKRELLRGFVKLRGHEQECVRRRVMKSVIANPYCSEAAARDAMESVWDVCYNDTQPFDRAP

Homology

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BLAST of Cp4.1LG01g23620 vs. Swiss-Prot
Match: ATP23_CRYNJ (Mitochondrial inner membrane protease ATP23 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=ATP23 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.5e-34
Identity = 70/170 (41.18%), Postives = 102/170 (60.00%), Query Frame = 1


Query: 25  EECEDMIRRSLR-TPMVKFLMEHLEKSGCGIGDKFIKAVHCDKQISGGYVRGEGIMVCRN 84
           ++CE   R  +  +PM+ FL+ HL+ +GC      ++   C +  +GG+    GI++C++
Sbjct: 56  DKCEGWKRDLMNYSPMITFLLNHLKLAGCPFPSSAMQCHPCPENRAGGFSPDHGILLCQD 115

Query: 85  HMNIQDEVNQVVIHELIHAFDDCRAANLDWANCAHHACSEIRAGHLSGDCHYKRELLRGF 144
               +  +   + HEL+HAFD CR   +DW N  HHACSEIRA +LSGDC + RE+ RGF
Sbjct: 116 RFFNKKHMEDTLAHELVHAFDHCRF-KVDWGNLRHHACSEIRAANLSGDCRFTREVKRGF 175

Query: 145 VKLRGHEQECVRRRVMKSVIANPYC-SEAAARDAMESVWDVCYNDTQPFD 193
                  Q CV+RR + SV+ANP C S   A  A+  VW+ C+ DT+PFD
Sbjct: 176 YAFNKQHQACVKRRAILSVLANPACTSPEMAEKAVNEVWESCFTDTRPFD 224

[Close]

BLAST of Cp4.1LG01g23620 vs. Swiss-Prot
Match: ATP23_CRYNB (Mitochondrial inner membrane protease ATP23 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=ATP23 PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.0e-34
Identity = 70/170 (41.18%), Postives = 102/170 (60.00%), Query Frame = 1


Query: 25  EECEDMIRRSLR-TPMVKFLMEHLEKSGCGIGDKFIKAVHCDKQISGGYVRGEGIMVCRN 84
           ++CE   R  +  +PM+ FL+ HL+ +GC      ++   C +  +GG+    GI++C++
Sbjct: 56  DKCEGWKRDLMNYSPMITFLLNHLKLAGCPFPSSAMQCHPCPENRAGGFSPDHGILLCQD 115

Query: 85  HMNIQDEVNQVVIHELIHAFDDCRAANLDWANCAHHACSEIRAGHLSGDCHYKRELLRGF 144
               +  +   + HEL+HAFD CR   +DW N  HHACSEIRA +LSGDC + RE+ RGF
Sbjct: 116 RFFNKKHMEDTLAHELVHAFDHCRF-KVDWGNLRHHACSEIRAANLSGDCRFTREVKRGF 175

Query: 145 VKLRGHEQECVRRRVMKSVIANPYC-SEAAARDAMESVWDVCYNDTQPFD 193
                  Q CV+RR + SV+ANP C S   A  A+  VW+ C+ DT+PFD
Sbjct: 176 YAFNKQHQACVKRRAILSVLANPACTSPEMAERAVNEVWESCFTDTRPFD 224

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BLAST of Cp4.1LG01g23620 vs. Swiss-Prot
Match: ATP23_XENLA (Mitochondrial inner membrane protease ATP23 homolog OS=Xenopus laevis GN=atp23 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.8e-32
Identity = 74/174 (42.53%), Postives = 110/174 (63.22%), Query Frame = 1


Query: 26  ECEDMIRRSLRT-PMVKFLMEHLEKSGCGI-GDKFIKAVHCDKQISGGYVRGEG-IMVCR 85
           +C+ M++ +L T P  K L++ +++SGC +  D+      CD  +SGG+      I++C+
Sbjct: 40  KCQLMLKIALDTSPYAKLLLDAMKQSGCTVYKDRHFSCEECDGSVSGGFDAATSEIVLCQ 99

Query: 86  NHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCAHH-ACSEIRAGHLSGDCHYKRELLR 145
           N+++ Q  +N+VV HELIHAFD CR A++DW N   H ACSEIRA +LSGDC    EL R
Sbjct: 100 NNIHQQSHMNRVVTHELIHAFDHCR-AHVDWFNNVRHLACSEIRAANLSGDCTLANELTR 159

Query: 146 GFVKLRGHEQECVRRRVMKSVIANPYCSEAAARDAMESVWDVCYNDTQPFDRAP 196
               ++GH Q CVR R ++S++A    S   A  A++ V+D C+ND +PF R P
Sbjct: 160 FKFGVKGHHQVCVRDRALRSILAVRNISRETAEKAVDEVFDSCFNDHEPFGRIP 212

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BLAST of Cp4.1LG01g23620 vs. Swiss-Prot
Match: ATP23_YARLI (Mitochondrial inner membrane protease ATP23 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=ATP23 PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 5.4e-32
Identity = 68/159 (42.77%), Postives = 98/159 (61.64%), Query Frame = 1


Query: 37  TPMVKFLMEHLEKSGCGIGDKFIKAVHCDKQISGGYVRGEGIMVCRNHMNIQDEVNQVVI 96
           +P V+F+ + +EK G  I    +   HCD   +GG+    GI+VC+NH+  +  +   + 
Sbjct: 90  SPTVRFMKDQIEKIGGDISSNNVFCDHCDDFKAGGFHPKYGILVCQNHVKSRSHLEDTLA 149

Query: 97  HELIHAFDDCRAANLDWANCAHHACSEIRAGHLSGDCHYKRELLRGFVK--LRGHEQECV 156
           HE++H +D+ +   +DW N  HHACSEIRA  LSG+C    EL++G +    RGH QEC 
Sbjct: 150 HEMVHYYDNTK-FKVDWMNLKHHACSEIRASTLSGECRMMNELMKGKLARLTRGH-QECA 209

Query: 157 RRRVMKSVIANPYC-SEAAARDAMESVWDVCYNDTQPFD 193
           +RR + SV+ANP C  EA A   +  VWD C+NDT+PFD
Sbjct: 210 KRRAILSVMANPGCKDEAQATQVVNEVWDSCFNDTRPFD 246

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BLAST of Cp4.1LG01g23620 vs. Swiss-Prot
Match: ATP23_SCHPO (Mitochondrial inner membrane protease atp23 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=atp23 PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 2.7e-31
Identity = 71/176 (40.34%), Postives = 107/176 (60.80%), Query Frame = 1


Query: 22  RTKEECEDMIRRSL--RTPMVKFLMEHLEKSGCGIGDKFIKAVHCDKQISGGYVRGEGIM 81
           + ++ CE  ++R+L  ++P++ FL   L++  C I  K I    CD Q +GGY+ G+GI+
Sbjct: 10  KERKNCE-RVKRALMSQSPVIIFLKTALDRLNCNIEAKDISCQPCDAQSTGGYIPGKGIV 69

Query: 82  VCRNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCAHHACSEIRAGHLSGDCHYKREL 141
           +C N +  +      + HE+IH FDD R   +DW N  H ACSEIRA  +SG+C + +EL
Sbjct: 70  LCENRLYTKKMAENTIAHEMIHMFDDHR-FEVDWNNLRHQACSEIRASSMSGECRWTKEL 129

Query: 142 LRGFVK-LRGHEQECVRRRVMKSVIANPYC-SEAAARDAMESVWDVCYNDTQPFDR 194
             G +K  R H QECV+RR   SV  NP C S+  A   +E V++ C+ND +PF++
Sbjct: 130 RFGNIKTFRKHHQECVKRRATISVQGNPNCKSKEQAEAIVEEVFNSCFNDFRPFEK 183

[Close]

BLAST of Cp4.1LG01g23620 vs. TrEMBL
Match: A0A0A0KSC7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517840 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 1.6e-107
Identity = 183/195 (93.85%), Postives = 191/195 (97.95%), Query Frame = 1


Query: 1   MAEESTPEPGSNRLYSAVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDKFIK 60
           MAEESTPEPGSNR YS+VNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGD+FIK
Sbjct: 1   MAEESTPEPGSNRSYSSVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60

Query: 61  AVHCDKQISGGYVRGEGIMVCRNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCAHHA 120
           AVHC+KQISGGYVRGEGIMVC NHMNIQDEVNQVVIHELIHAFDDCRAANLDWANC HHA
Sbjct: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA 120

Query: 121 CSEIRAGHLSGDCHYKRELLRGFVKLRGHEQECVRRRVMKSVIANPYCSEAAARDAMESV 180
           CSEIRAGHLSGDCHYKRELLRGF+KLRGHEQECVRRRVMKS++ANPYC EAAA+DAME+V
Sbjct: 121 CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAV 180

Query: 181 WDVCYNDTQPFDRAP 196
           WDVCYNDTQPFDRAP
Sbjct: 181 WDVCYNDTQPFDRAP 195

[Close]

BLAST of Cp4.1LG01g23620 vs. TrEMBL
Match: M5WXF5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011801mg PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 7.1e-100
Identity = 169/195 (86.67%), Postives = 186/195 (95.38%), Query Frame = 1


Query: 1   MAEESTPEPGSNRLYSAVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDKFIK 60
           MA+E  PEPGS+   SAVNGG+T EEC+DMI+RSLR PMVKFL++HLE++GCGIGD+FIK
Sbjct: 1   MADEPAPEPGSSSFSSAVNGGKTLEECQDMIQRSLRIPMVKFLLKHLEQAGCGIGDRFIK 60

Query: 61  AVHCDKQISGGYVRGEGIMVCRNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCAHHA 120
           AVHCDKQI+GGY RGEGI+VC NHMNIQDEVNQVVIHELIHAFDDCRAANL+WANCAHHA
Sbjct: 61  AVHCDKQIAGGYARGEGILVCGNHMNIQDEVNQVVIHELIHAFDDCRAANLNWANCAHHA 120

Query: 121 CSEIRAGHLSGDCHYKRELLRGFVKLRGHEQECVRRRVMKSVIANPYCSEAAARDAMESV 180
           CSEIRAGHLSGDCHYKRELLRGFVK+RGHEQ+CVRRRVMKSVIANPYCSEAAA+DAME+V
Sbjct: 121 CSEIRAGHLSGDCHYKRELLRGFVKIRGHEQDCVRRRVMKSVIANPYCSEAAAKDAMEAV 180

Query: 181 WDVCYNDTQPFDRAP 196
           WDVCYNDTQPFDRAP
Sbjct: 181 WDVCYNDTQPFDRAP 195

[Close]

BLAST of Cp4.1LG01g23620 vs. TrEMBL
Match: W9R362_9ROSA (Mitochondrial inner membrane protease ATP23 OS=Morus notabilis GN=L484_017764 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 5.3e-95
Identity = 162/195 (83.08%), Postives = 184/195 (94.36%), Query Frame = 1


Query: 1   MAEESTPEPGSNRLYSAVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDKFIK 60
           M +   PEPG++   +AVNGG+T  ECEDMIRRSLRTPMVKFL+E+LEKSGC IGDKFI+
Sbjct: 1   MEDVPAPEPGTS---TAVNGGKTIPECEDMIRRSLRTPMVKFLLENLEKSGCAIGDKFIR 60

Query: 61  AVHCDKQISGGYVRGEGIMVCRNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCAHHA 120
           AVHC+++++GGYVRGEGI+VC NHMNIQD+VNQVVIHELIHA+DDCRAANLDWANCAHHA
Sbjct: 61  AVHCNRRLAGGYVRGEGIIVCSNHMNIQDDVNQVVIHELIHAYDDCRAANLDWANCAHHA 120

Query: 121 CSEIRAGHLSGDCHYKRELLRGFVKLRGHEQECVRRRVMKSVIANPYCSEAAARDAMESV 180
           CSEIRAGHLSGDCHYKRELLRGFVK+RGHEQ+CVRRRVMKSVIANPYCSEAAA+DAME+V
Sbjct: 121 CSEIRAGHLSGDCHYKRELLRGFVKIRGHEQDCVRRRVMKSVIANPYCSEAAAKDAMEAV 180

Query: 181 WDVCYNDTQPFDRAP 196
           WD+CYNDT+PFDRAP
Sbjct: 181 WDICYNDTKPFDRAP 192

[Close]

BLAST of Cp4.1LG01g23620 vs. TrEMBL
Match: A0A067E9V3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029293mg PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 3.4e-94
Identity = 160/195 (82.05%), Postives = 179/195 (91.79%), Query Frame = 1


Query: 1   MAEESTPEPGSNRLYSAVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDKFIK 60
           M+EE  P+       SAVNGGRT EEC+DMI+RSLR P VKFL +HLEK+GCG GDKFIK
Sbjct: 1   MSEEPAPKSIPESSSSAVNGGRTIEECQDMIQRSLRNPTVKFLRQHLEKAGCGFGDKFIK 60

Query: 61  AVHCDKQISGGYVRGEGIMVCRNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCAHHA 120
           AVHCDK+I+GGYVRGEGI+VC NHMNIQDEVNQV+IHELIHA+D+CRAANLDW+NCAHHA
Sbjct: 61  AVHCDKKIAGGYVRGEGILVCSNHMNIQDEVNQVIIHELIHAYDECRAANLDWSNCAHHA 120

Query: 121 CSEIRAGHLSGDCHYKRELLRGFVKLRGHEQECVRRRVMKSVIANPYCSEAAARDAMESV 180
           CSEIRAGHLSGDCHYKRELLRG++K+RGHEQ+CVRRRVMKSVIANPYCS AAA+DAME+V
Sbjct: 121 CSEIRAGHLSGDCHYKRELLRGYMKIRGHEQDCVRRRVMKSVIANPYCSAAAAKDAMEAV 180

Query: 181 WDVCYNDTQPFDRAP 196
           WDVCYNDTQPFDRAP
Sbjct: 181 WDVCYNDTQPFDRAP 195

[Close]

BLAST of Cp4.1LG01g23620 vs. TrEMBL
Match: V4THM4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016815mg PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 1.3e-93
Identity = 159/195 (81.54%), Postives = 179/195 (91.79%), Query Frame = 1


Query: 1   MAEESTPEPGSNRLYSAVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDKFIK 60
           M+EE  P+       SAVNGGRT EEC+DMI+RSLR P VKFL +HLEK+GCG GDKFIK
Sbjct: 1   MSEEPAPKSIPESSSSAVNGGRTIEECQDMIQRSLRNPTVKFLRQHLEKAGCGFGDKFIK 60

Query: 61  AVHCDKQISGGYVRGEGIMVCRNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCAHHA 120
           AVHC+K+I+GGYVRGEGI+VC NHMNIQDEVNQV+IHELIHA+D+CRAANLDW+NCAHHA
Sbjct: 61  AVHCNKKIAGGYVRGEGILVCSNHMNIQDEVNQVIIHELIHAYDECRAANLDWSNCAHHA 120

Query: 121 CSEIRAGHLSGDCHYKRELLRGFVKLRGHEQECVRRRVMKSVIANPYCSEAAARDAMESV 180
           CSEIRAGHLSGDCHYKRELLRG++K+RGHEQ+CVRRRVMKSVIANPYCS AAA+DAME+V
Sbjct: 121 CSEIRAGHLSGDCHYKRELLRGYMKIRGHEQDCVRRRVMKSVIANPYCSAAAAKDAMEAV 180

Query: 181 WDVCYNDTQPFDRAP 196
           WDVCYNDTQPFDRAP
Sbjct: 181 WDVCYNDTQPFDRAP 195

[Close]

BLAST of Cp4.1LG01g23620 vs. TAIR10
Match: AT3G03420.1 (AT3G03420.1 Ku70-binding family protein)

HSP 1 Score: 301.6 bits (771), Expect = 3.5e-82
Identity = 134/195 (68.72%), Postives = 160/195 (82.05%), Query Frame = 1


Query: 1   MAEESTPEPGSNRLYSAVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDKFIK 60
           M + + P  GS         G++ +EC+DMIRRS R P+VKFLME +EKSGC +GD F+K
Sbjct: 1   MEDAAAPNSGSE-FNPGARRGKSIDECQDMIRRSFRNPIVKFLMEQMEKSGCRVGDNFVK 60

Query: 61  AVHCDKQISGGYVRGEGIMVCRNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCAHHA 120
           AV C   ++GGY +G GI VC N++ IQDEVNQVVIHELIHA+D+CRA NLDW NCAHHA
Sbjct: 61  AVVCTGPVAGGYTKGRGITVCSNYLTIQDEVNQVVIHELIHAYDECRAKNLDWTNCAHHA 120

Query: 121 CSEIRAGHLSGDCHYKRELLRGFVKLRGHEQECVRRRVMKSVIANPYCSEAAARDAMESV 180
           CSEIRAGHLSGDCH+KRELLRGF+KLRGHEQEC++RRV+KS+  NPYCSE AA+DAME+V
Sbjct: 121 CSEIRAGHLSGDCHFKRELLRGFIKLRGHEQECIKRRVLKSLRGNPYCSEVAAKDAMEAV 180

Query: 181 WDVCYNDTQPFDRAP 196
           WD CYNDT+PFDRAP
Sbjct: 181 WDTCYNDTKPFDRAP 194

[Close]

BLAST of Cp4.1LG01g23620 vs. NCBI nr
Match: gi|778703521|ref|XP_011655379.1| (PREDICTED: mitochondrial inner membrane protease ATP23 [Cucumis sativus])

HSP 1 Score: 396.7 bits (1018), Expect = 2.3e-107
Identity = 183/195 (93.85%), Postives = 191/195 (97.95%), Query Frame = 1


Query: 1   MAEESTPEPGSNRLYSAVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDKFIK 60
           MAEESTPEPGSNR YS+VNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGD+FIK
Sbjct: 1   MAEESTPEPGSNRSYSSVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60

Query: 61  AVHCDKQISGGYVRGEGIMVCRNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCAHHA 120
           AVHC+KQISGGYVRGEGIMVC NHMNIQDEVNQVVIHELIHAFDDCRAANLDWANC HHA
Sbjct: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA 120

Query: 121 CSEIRAGHLSGDCHYKRELLRGFVKLRGHEQECVRRRVMKSVIANPYCSEAAARDAMESV 180
           CSEIRAGHLSGDCHYKRELLRGF+KLRGHEQECVRRRVMKS++ANPYC EAAA+DAME+V
Sbjct: 121 CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAV 180

Query: 181 WDVCYNDTQPFDRAP 196
           WDVCYNDTQPFDRAP
Sbjct: 181 WDVCYNDTQPFDRAP 195

[Close]

BLAST of Cp4.1LG01g23620 vs. NCBI nr
Match: gi|659117903|ref|XP_008458847.1| (PREDICTED: mitochondrial inner membrane protease ATP23 [Cucumis melo])

HSP 1 Score: 390.6 bits (1002), Expect = 1.6e-105
Identity = 180/195 (92.31%), Postives = 188/195 (96.41%), Query Frame = 1


Query: 1   MAEESTPEPGSNRLYSAVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDKFIK 60
           MAEESTPEPGSNR YS+V GGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGD+FIK
Sbjct: 1   MAEESTPEPGSNRSYSSVTGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60

Query: 61  AVHCDKQISGGYVRGEGIMVCRNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCAHHA 120
           AVHC+KQISGGYVRGEGIMVC NHMNIQDEVNQVVIHELIHAFDDCRAANLDWANC HHA
Sbjct: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA 120

Query: 121 CSEIRAGHLSGDCHYKRELLRGFVKLRGHEQECVRRRVMKSVIANPYCSEAAARDAMESV 180
           CSEIRAGHLSGDCHYKRELLRGF+KLRGHEQECVRRRVMKS+ ANPYC E AA+DAME+V
Sbjct: 121 CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQECVRRRVMKSLTANPYCPEPAAKDAMEAV 180

Query: 181 WDVCYNDTQPFDRAP 196
           WD+CYNDTQPFDRAP
Sbjct: 181 WDICYNDTQPFDRAP 195

[Close]

BLAST of Cp4.1LG01g23620 vs. NCBI nr
Match: gi|595967299|ref|XP_007217268.1| (hypothetical protein PRUPE_ppa011801mg [Prunus persica])

HSP 1 Score: 371.3 bits (952), Expect = 1.0e-99
Identity = 169/195 (86.67%), Postives = 186/195 (95.38%), Query Frame = 1


Query: 1   MAEESTPEPGSNRLYSAVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDKFIK 60
           MA+E  PEPGS+   SAVNGG+T EEC+DMI+RSLR PMVKFL++HLE++GCGIGD+FIK
Sbjct: 1   MADEPAPEPGSSSFSSAVNGGKTLEECQDMIQRSLRIPMVKFLLKHLEQAGCGIGDRFIK 60

Query: 61  AVHCDKQISGGYVRGEGIMVCRNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCAHHA 120
           AVHCDKQI+GGY RGEGI+VC NHMNIQDEVNQVVIHELIHAFDDCRAANL+WANCAHHA
Sbjct: 61  AVHCDKQIAGGYARGEGILVCGNHMNIQDEVNQVVIHELIHAFDDCRAANLNWANCAHHA 120

Query: 121 CSEIRAGHLSGDCHYKRELLRGFVKLRGHEQECVRRRVMKSVIANPYCSEAAARDAMESV 180
           CSEIRAGHLSGDCHYKRELLRGFVK+RGHEQ+CVRRRVMKSVIANPYCSEAAA+DAME+V
Sbjct: 121 CSEIRAGHLSGDCHYKRELLRGFVKIRGHEQDCVRRRVMKSVIANPYCSEAAAKDAMEAV 180

Query: 181 WDVCYNDTQPFDRAP 196
           WDVCYNDTQPFDRAP
Sbjct: 181 WDVCYNDTQPFDRAP 195

[Close]

BLAST of Cp4.1LG01g23620 vs. NCBI nr
Match: gi|645248855|ref|XP_008230483.1| (PREDICTED: mitochondrial inner membrane protease ATP23 [Prunus mume])

HSP 1 Score: 368.6 bits (945), Expect = 6.6e-99
Identity = 168/195 (86.15%), Postives = 185/195 (94.87%), Query Frame = 1


Query: 1   MAEESTPEPGSNRLYSAVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDKFIK 60
           MA+   PEPGS+   SAVNGG+T EEC+DMI+RSLR PMVKFL++HLE++GCGIGD+FIK
Sbjct: 1   MADGPAPEPGSSSFSSAVNGGKTLEECQDMIQRSLRIPMVKFLLKHLEQAGCGIGDRFIK 60

Query: 61  AVHCDKQISGGYVRGEGIMVCRNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCAHHA 120
           AVHCDKQI+GGY RGEGI+VC NHMNIQDEVNQVVIHELIHAFDDCRAANL+WANCAHHA
Sbjct: 61  AVHCDKQIAGGYARGEGILVCGNHMNIQDEVNQVVIHELIHAFDDCRAANLNWANCAHHA 120

Query: 121 CSEIRAGHLSGDCHYKRELLRGFVKLRGHEQECVRRRVMKSVIANPYCSEAAARDAMESV 180
           CSEIRAGHLSGDCHYKRELLRGFVK+RGHEQ+CVRRRVMKSVIANPYCSEAAA+DAME+V
Sbjct: 121 CSEIRAGHLSGDCHYKRELLRGFVKIRGHEQDCVRRRVMKSVIANPYCSEAAAKDAMEAV 180

Query: 181 WDVCYNDTQPFDRAP 196
           WDVCYNDTQPFDRAP
Sbjct: 181 WDVCYNDTQPFDRAP 195

[Close]

BLAST of Cp4.1LG01g23620 vs. NCBI nr
Match: gi|1009159174|ref|XP_015897671.1| (PREDICTED: mitochondrial inner membrane protease ATP23 [Ziziphus jujuba])

HSP 1 Score: 367.1 bits (941), Expect = 1.9e-98
Identity = 167/195 (85.64%), Postives = 183/195 (93.85%), Query Frame = 1


Query: 1   MAEESTPEPGSNRLYSAVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDKFIK 60
           MAEE  PEPGS    +AVNGG+T EECEDMI+RSLRTPMVKFL+EHL+KSGC +GDKFIK
Sbjct: 1   MAEEPGPEPGSGTFSNAVNGGKTVEECEDMIQRSLRTPMVKFLLEHLQKSGCVVGDKFIK 60

Query: 61  AVHCDKQISGGYVRGEGIMVCRNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCAHHA 120
           AV+CDKQI+GGYVRGEGIMVC NHMN QD+VNQVV HELIHAFDDCRA NLDWANCAHHA
Sbjct: 61  AVNCDKQIAGGYVRGEGIMVCSNHMNFQDDVNQVVTHELIHAFDDCRAKNLDWANCAHHA 120

Query: 121 CSEIRAGHLSGDCHYKRELLRGFVKLRGHEQECVRRRVMKSVIANPYCSEAAARDAMESV 180
           CSEIRAGHLSGDCHYKRELLRGF+K+RGHEQ+CVRRRVMKSV+ANPYCSEAAA+DAME+V
Sbjct: 121 CSEIRAGHLSGDCHYKRELLRGFLKMRGHEQDCVRRRVMKSVMANPYCSEAAAKDAMEAV 180

Query: 181 WDVCYNDTQPFDRAP 196
           WD+CYNDTQPFDRAP
Sbjct: 181 WDICYNDTQPFDRAP 195

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g23620 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATP23_CRYNJ	1.5e-34	41.18	Mitochondrial inner membrane protease ATP23 OS=Cryptococcus neoformans var. neof...	[more]
ATP23_CRYNB	2.0e-34	41.18	Mitochondrial inner membrane protease ATP23 OS=Cryptococcus neoformans var. neof...	[more]
ATP23_XENLA	1.8e-32	42.53	Mitochondrial inner membrane protease ATP23 homolog OS=Xenopus laevis GN=atp23 P...	[more]
ATP23_YARLI	5.4e-32	42.77	Mitochondrial inner membrane protease ATP23 OS=Yarrowia lipolytica (strain CLIB ...	[more]
ATP23_SCHPO	2.7e-31	40.34	Mitochondrial inner membrane protease atp23 OS=Schizosaccharomyces pombe (strain...	[more]

BLAST of Cp4.1LG01g23620 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSC7_CUCSA	1.6e-107	93.85	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517840 PE=4 SV=1	[more]
M5WXF5_PRUPE	7.1e-100	86.67	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011801mg PE=4 SV=1	[more]
W9R362_9ROSA	5.3e-95	83.08	Mitochondrial inner membrane protease ATP23 OS=Morus notabilis GN=L484_017764 PE...	[more]
A0A067E9V3_CITSI	3.4e-94	82.05	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029293mg PE=4 SV=1	[more]
V4THM4_9ROSI	1.3e-93	81.54	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016815mg PE=4 SV=1	[more]

BLAST of Cp4.1LG01g23620 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G03420.1	3.5e-82	68.72	Ku70-binding family protein	[more]

BLAST of Cp4.1LG01g23620 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778703521\|ref\|XP_011655379.1\|	2.3e-107	93.85	PREDICTED: mitochondrial inner membrane protease ATP23 [Cucumis sativus]	[more]
gi\|659117903\|ref\|XP_008458847.1\|	1.6e-105	92.31	PREDICTED: mitochondrial inner membrane protease ATP23 [Cucumis melo]	[more]
gi\|595967299\|ref\|XP_007217268.1\|	1.0e-99	86.67	hypothetical protein PRUPE_ppa011801mg [Prunus persica]	[more]
gi\|645248855\|ref\|XP_008230483.1\|	6.6e-99	86.15	PREDICTED: mitochondrial inner membrane protease ATP23 [Prunus mume]	[more]
gi\|1009159174\|ref\|XP_015897671.1\|	1.9e-98	85.64	PREDICTED: mitochondrial inner membrane protease ATP23 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004222	metalloendopeptidase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR019165	Peptidase_M76_ATP23

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g23620.1	Cp4.1LG01g23620.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019165	Peptidase M76, ATP23	PFAM	PF09768	Peptidase_M76	coord: 25..192 score: 2.8
None	No IPR available	PANTHER	PTHR21711	KUB3-PROV PROTEIN	coord: 25..195 score: 9.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g23620	Cucsa.011040	Cucumber (Gy14) v1	cgycpeB0522
Cp4.1LG01g23620	CmaCh15G003710	Cucurbita maxima (Rimu)	cmacpeB317
Cp4.1LG01g23620	CmaCh04G026650	Cucurbita maxima (Rimu)	cmacpeB721
Cp4.1LG01g23620	CmoCh04G027930	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g23620	CmoCh15G003830	Cucurbita moschata (Rifu)	cmocpeB279
Cp4.1LG01g23620	Cla004640	Watermelon (97103) v1	cpewmB381
Cp4.1LG01g23620	Csa5G517840	Cucumber (Chinese Long) v2	cpecuB417
Cp4.1LG01g23620	MELO3C021605	Melon (DHL92) v3.5.1	cpemeB358
Cp4.1LG01g23620	ClCG09G019490	Watermelon (Charleston Gray)	cpewcgB344
Cp4.1LG01g23620	CSPI05G17980	Wild cucumber (PI 183967)	cpecpiB416
Cp4.1LG01g23620	Lsi02G016110	Bottle gourd (USVL1VR-Ls)	cpelsiB336
Cp4.1LG01g23620	MELO3C021605.2	Melon (DHL92) v3.6.1	cpemedB418
Cp4.1LG01g23620	CsaV3_5G026890	Cucumber (Chinese Long) v3	cpecucB0519
Cp4.1LG01g23620	Bhi06G000497	Wax gourd	cpewgoB0502
Cp4.1LG01g23620	CsGy5G017660	Cucumber (Gy14) v2	cgybcpeB627
Cp4.1LG01g23620	Carg04479	Silver-seed gourd	carcpeB0965
Cp4.1LG01g23620	Carg02334	Silver-seed gourd	carcpeB0374

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g23620	Cucurbita pepo (Zucchini)	cpecpeB199