MELO3C021605.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C021605.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	mitochondrial inner membrane protease ATP23
Location	chr09 : 4394567 .. 4397189 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGACTAAAATAATTAGTTTGAAATATCTAATGCTCTTCTTGAAAACTCAGTTTAGTCCAGTTCGGATCGGTGAAAACCCGATAATTCGAATCGGTGTTCGACCCGGATTCTGAACCCCAAATCCATTACCCACTCGTAGATAGGCTGCTGGCGGCGACCGCCGATCAAATTGGAACTTAGAGAGTAAAACATGGCGGAAGAATCCACGCCGGAACCTGGATCAAATCGCTCGTATTCTTCCGTCACCGGTGGCCGGACTAAGGAGGAATGCGAGGATATGATTCGTAGAAGTCTCCGAAGTATGAATTACAACTATATTCTTTCCAGTTCATTCGTTTCCTCAACATCTGGGACCCCCAACATATTTTCGGGGTTTAGGGTTTTAGGACTTTCGTTAATTTCCTGATTATTTGAAAAATTAGAACTTCCTGTCTTATTCTCACGGGTCATTCAATCTATTTCTGCGTCTCTCAGCTCCGATGGTGAAGTTCTTGATGGAGCACTTGGAGAAATCTGGATGTGGGATTGGGGATAGGTTTATTAAGGCTGTTCATTGCGAGAAGCAGATCAGCGGTGGTTATGTTCGTGGTGAAGGGGTAATTATAATCTCCTCTCTTTGTTTCTGCATATGGTTTTAAATGAATACTTGAAGTTTTACCTTATCATTCAGAATGAATAAACAAAATTTGCATCGTTAAAAAAGAATGGGGAGGAAGAAACTGTTGAACACTGATTTCTTTGTTGTGCCCTGTTTTTTGGTTTTAGATAATGGTGTGTAGTAATCACATGAACATTCAAGATGAGGTGAACCAAGTAGTAATTCATGAGCTTATTCATGCTTTTGATGATTGTCGAGCTGCAAACTTGGATTGGGCTAATTGTACTCATCATGCTTGCAGTGAGGTATGCATCTGCATTTAGCCATTTAACCATTTCCTTCCACAAATTGAGTCTTTTCCCCCCTAGATTTACGTTATTTTGTTTTGGGATTTTCTAACGTATATACATTTTGAATTTAGATTCGTGCTGGACATTTAAGTGGTGATTGCCACTATAAACGAGAACTATTGCGAGGTTTCATGAAATTACGAGGCCACGAGCAAGTATGATTTTCTTTCACTTCCTTTTTGGAAATAACATAGTACTCTTACCTCTTATTGGCATCTAAAAATGAGCGTGAGTTTGTAGTCCATGATATCTCAAATTTGAGTTCTTTGACACTGTTCATAGCCTCTTGCTTAAATAGGTGACCAACATCCATGAAGTATGATTAGAGTTGTGATAAATATTTGCCGGTGGATCAAGGACTAATGAACATGAATCACTTGGAAGTTGTAAAATTTTTTGTACCTTTTGAGCTAATTTCTTTGCACTCTGCTGATAGATAAGTTACACGGTTACATTTCTCAAGTTTTTATGTTACATTAAAGAACTTTTCTCATGGTAGAACTTAAAAACTGTGTACGCTCATGCTAACTTGAATCTGATCTTGGCAATGAATATAATTGTATAAATGTTTTCAGTCATTCTCATGTTTTAACTTTTGGCTTGGAATCTTAAGTCACAATAAGTATTTTGATGCTCAAGTATTCACATTTCCTCGGCCCTCTGCTAAACTAGCTTTATTTTTTTTATATCCAAATGGTTTCTAAACTAGCTTAAATAAGAAGAGTGAGAATGAAAGTCCTCTTTTTTGGATAGGAAAAGATTTTAATGATTTCATTGATAGAGAATAGAAGTTCCTCAGGAAGAAACATAATATTAGCAGGATCTTTTAGGAACACTTATCTTGAAGCCATGTGTGGATTGAGTTCATTTCTGTTTTCCCTCACTGGCTAATGTTTGGAAGAAACCTAGGTTTACGCAACTCTAAAACTAAAAGGAGCAATTGGGGGACTATTATAAGTCGTCTTGGTTATATGTAGGAGAGTGGCGATGGACCGGTGACCTAACCATGTGTGGGATGTGTGATGATCAGCAATTTTTATTCTTTCTTCTAACAAAACCTGCTCTCACATTTTTCTTTCCTTCTTCATCCATGAACATTAGGTGAACTACATTCCATTGAGCTCTTTTCGATAAGTTTCCATTGACTTCTTTCTTTTTTATAGGAATGTGTGAGAAGAAGAGTCATGAAATCACTGACGGCTAATCCTTACTGCCCAGAACCTGCTGCAAAAGATGCCATGGAAGCTGTATGGGATATTTGTTATAATGATACACAGCCATTTGATAGAGCTCCCTAAAACTTGGAATATCGTCATTTCATCTACCAAGAACAAAGCAGCCACTGCTCCTAATTTAATGGTGCTGTGCCAAAATGAACAACAGGTTTTCTTCCCAAGTTTTGGATTGCTTACATTTTGGAGAGAATTTATTTGCCTCGAGCAGTTTGATCGTAATCGATCGATGATTTTATTCCGTTATAGACATTCCCATTTTTGTTGCTTCTGATTCCATACCCATTTATAATAGATAAACTTATTGGATAATACATCTAAATGTGTTGAAGCAAATAAAACATGATTTAGCTCATCTTTTAAAAGTACCTTCATGAATAGGTTTAACATGTGTAAAAACAGTATTCCATTTTTCATATTGGAAAATATCAATTTTTATTCCT

mRNA sequence

AGACTAAAATAATTAGTTTGAAATATCTAATGCTCTTCTTGAAAACTCAGTTTAGTCCAGTTCGGATCGGTGAAAACCCGATAATTCGAATCGGTGTTCGACCCGGATTCTGAACCCCAAATCCATTACCCACTCGTAGATAGGCTGCTGGCGGCGACCGCCGATCAAATTGGAACTTAGAGAGTAAAACATGGCGGAAGAATCCACGCCGGAACCTGGATCAAATCGCTCGTATTCTTCCGTCACCGGTGGCCGGACTAAGGAGGAATGCGAGGATATGATTCGTAGAAGTCTCCGAACTCCGATGGTGAAGTTCTTGATGGAGCACTTGGAGAAATCTGGATGTGGGATTGGGGATAGGTTTATTAAGGCTGTTCATTGCGAGAAGCAGATCAGCGGTGGTTATGTTCGTGGTGAAGGGATAATGGTGTGTAGTAATCACATGAACATTCAAGATGAGGTGAACCAAGTAGTAATTCATGAGCTTATTCATGCTTTTGATGATTGTCGAGCTGCAAACTTGGATTGGGCTAATTGTACTCATCATGCTTGCAGTGAGATTCGTGCTGGACATTTAAGTGGTGATTGCCACTATAAACGAGAACTATTGCGAGGTTTCATGAAATTACGAGGCCACGAGCAAGAGAGTGGCGATGGACCGGAATGTGTGAGAAGAAGAGTCATGAAATCACTGACGGCTAATCCTTACTGCCCAGAACCTGCTGCAAAAGATGCCATGGAAGCTGTATGGGATATTTGTTATAATGATACACAGCCATTTGATAGAGCTCCCTAAAACTTGGAATATCGTCATTTCATCTACCAAGAACAAAGCAGCCACTGCTCCTAATTTAATGGTGCTGTGCCAAAATGAACAACAGGTTTTCTTCCCAAGTTTTGGATTGCTTACATTTTGGAGAGAATTTATTTGCCTCGAGCAGTTTGATCGTAATCGATCGATGATTTTATTCCGTTATAGACATTCCCATTTTTGTTGCTTCTGATTCCATACCCATTTATAATAGATAAACTTATTGGATAATACATCTAAATGTGTTGAAGCAAATAAAACATGATTTAGCTCATCTTTTAAAAGTACCTTCATGAATAGGTTTAACATGTGTAAAAACAGTATTCCATTTTTCATATTGGAAAATATCAATTTTTATTCCT

Coding sequence (CDS)

ATGGCGGAAGAATCCACGCCGGAACCTGGATCAAATCGCTCGTATTCTTCCGTCACCGGTGGCCGGACTAAGGAGGAATGCGAGGATATGATTCGTAGAAGTCTCCGAACTCCGATGGTGAAGTTCTTGATGGAGCACTTGGAGAAATCTGGATGTGGGATTGGGGATAGGTTTATTAAGGCTGTTCATTGCGAGAAGCAGATCAGCGGTGGTTATGTTCGTGGTGAAGGGATAATGGTGTGTAGTAATCACATGAACATTCAAGATGAGGTGAACCAAGTAGTAATTCATGAGCTTATTCATGCTTTTGATGATTGTCGAGCTGCAAACTTGGATTGGGCTAATTGTACTCATCATGCTTGCAGTGAGATTCGTGCTGGACATTTAAGTGGTGATTGCCACTATAAACGAGAACTATTGCGAGGTTTCATGAAATTACGAGGCCACGAGCAAGAGAGTGGCGATGGACCGGAATGTGTGAGAAGAAGAGTCATGAAATCACTGACGGCTAATCCTTACTGCCCAGAACCTGCTGCAAAAGATGCCATGGAAGCTGTATGGGATATTTGTTATAATGATACACAGCCATTTGATAGAGCTCCCTAA

Protein sequence

MAEESTPEPGSNRSYSSVTGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIKAVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHACSEIRAGHLSGDCHYKRELLRGFMKLRGHEQESGDGPECVRRRVMKSLTANPYCPEPAAKDAMEAVWDICYNDTQPFDRAP

Homology

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BLAST of MELO3C021605.2 vs. NCBI nr
Match: XP_008458847.1 (PREDICTED: mitochondrial inner membrane protease ATP23 [Cucumis melo])

HSP 1 Score: 409.8 bits (1052), Expect = 5.2e-111
Identity = 195/201 (97.01%), Postives = 195/201 (97.01%), Query Frame = 0


Query: 1   MAEESTPEPGSNRSYSSVTGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60
           MAEESTPEPGSNRSYSSVTGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK
Sbjct: 1   MAEESTPEPGSNRSYSSVTGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60

Query: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA 120
           AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA
Sbjct: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA 120

Query: 121 CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQESGDGPECVRRRVMKSLTANPYCPEPAAK 180
           CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQ      ECVRRRVMKSLTANPYCPEPAAK
Sbjct: 121 CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQ------ECVRRRVMKSLTANPYCPEPAAK 180

Query: 181 DAMEAVWDICYNDTQPFDRAP 202
           DAMEAVWDICYNDTQPFDRAP
Sbjct: 181 DAMEAVWDICYNDTQPFDRAP 195

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BLAST of MELO3C021605.2 vs. NCBI nr
Match: XP_011655379.1 (PREDICTED: mitochondrial inner membrane protease ATP23 [Cucumis sativus] >KGN51337.1 hypothetical protein Csa_5G517840 [Cucumis sativus])

HSP 1 Score: 402.5 bits (1033), Expect = 8.3e-109
Identity = 191/201 (95.02%), Postives = 192/201 (95.52%), Query Frame = 0


Query: 1   MAEESTPEPGSNRSYSSVTGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60
           MAEESTPEPGSNRSYSSV GGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK
Sbjct: 1   MAEESTPEPGSNRSYSSVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60

Query: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA 120
           AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA
Sbjct: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA 120

Query: 121 CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQESGDGPECVRRRVMKSLTANPYCPEPAAK 180
           CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQ      ECVRRRVMKSL ANPYCPE AAK
Sbjct: 121 CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQ------ECVRRRVMKSLVANPYCPEAAAK 180

Query: 181 DAMEAVWDICYNDTQPFDRAP 202
           DAMEAVWD+CYNDTQPFDRAP
Sbjct: 181 DAMEAVWDVCYNDTQPFDRAP 195

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BLAST of MELO3C021605.2 vs. NCBI nr
Match: XP_022133506.1 (mitochondrial inner membrane protease ATP23 [Momordica charantia])

HSP 1 Score: 386.3 bits (991), Expect = 6.2e-104
Identity = 180/201 (89.55%), Postives = 189/201 (94.03%), Query Frame = 0


Query: 1   MAEESTPEPGSNRSYSSVTGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60
           MAEES PEPGSNRSYS++ GGRTKEECEDMIRRSLRTPMVKFL+EHLEKSGCGIGD+FIK
Sbjct: 1   MAEESAPEPGSNRSYSAINGGRTKEECEDMIRRSLRTPMVKFLLEHLEKSGCGIGDKFIK 60

Query: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA 120
           AVHC+KQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANC HHA
Sbjct: 61  AVHCDKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCAHHA 120

Query: 121 CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQESGDGPECVRRRVMKSLTANPYCPEPAAK 180
           CSEIRAGHLSGDCHYKRELLRG++KLRGHEQ      ECVRRRVMKS+ ANPYC E AAK
Sbjct: 121 CSEIRAGHLSGDCHYKRELLRGYVKLRGHEQ------ECVRRRVMKSVIANPYCSEAAAK 180

Query: 181 DAMEAVWDICYNDTQPFDRAP 202
           DAMEAVWD+CYNDTQPFDRAP
Sbjct: 181 DAMEAVWDVCYNDTQPFDRAP 195

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BLAST of MELO3C021605.2 vs. NCBI nr
Match: XP_022922282.1 (mitochondrial inner membrane protease ATP23 [Cucurbita moschata] >XP_022990978.1 mitochondrial inner membrane protease ATP23 [Cucurbita maxima] >XP_023526059.1 mitochondrial inner membrane protease ATP23 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 384.4 bits (986), Expect = 2.3e-103
Identity = 180/201 (89.55%), Postives = 188/201 (93.53%), Query Frame = 0


Query: 1   MAEESTPEPGSNRSYSSVTGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60
           MAEESTPEPGSNR YS+V GGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGD+FIK
Sbjct: 1   MAEESTPEPGSNRLYSAVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDKFIK 60

Query: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA 120
           AVHC+KQISGGYVRGEGIMVC NHMNIQDEVNQVVIHELIHAFDDCRAANLDWANC HHA
Sbjct: 61  AVHCDKQISGGYVRGEGIMVCRNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCAHHA 120

Query: 121 CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQESGDGPECVRRRVMKSLTANPYCPEPAAK 180
           CSEIRAGHLSGDCHYKRELLRGF+KLRGHEQ      ECVRRRVMKS+ ANPYC E AA+
Sbjct: 121 CSEIRAGHLSGDCHYKRELLRGFVKLRGHEQ------ECVRRRVMKSVIANPYCSEAAAR 180

Query: 181 DAMEAVWDICYNDTQPFDRAP 202
           DAME+VWD+CYNDTQPFDRAP
Sbjct: 181 DAMESVWDVCYNDTQPFDRAP 195

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BLAST of MELO3C021605.2 vs. NCBI nr
Match: XP_024183326.1 (mitochondrial inner membrane protease ATP23 [Rosa chinensis] >PRQ54086.1 putative peptidase M76, ATP23 [Rosa chinensis])

HSP 1 Score: 360.5 bits (924), Expect = 3.6e-96
Identity = 167/201 (83.08%), Postives = 182/201 (90.55%), Query Frame = 0


Query: 1   MAEESTPEPGSNRSYSSVTGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60
           MA+E TPEPG++ S S+V GG+T  EC+DMIRRSLRTPMVKFL+EHLEKSGCGIGD FIK
Sbjct: 39  MADEPTPEPGTSTSPSAVNGGKTVNECQDMIRRSLRTPMVKFLLEHLEKSGCGIGDGFIK 98

Query: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA 120
           AVHCEK+I+GGY RG GIMVCSNHMN+QDEVNQVVIHELIHAFDDCRAANL+WANC HHA
Sbjct: 99  AVHCEKKIAGGYTRGGGIMVCSNHMNMQDEVNQVVIHELIHAFDDCRAANLNWANCAHHA 158

Query: 121 CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQESGDGPECVRRRVMKSLTANPYCPEPAAK 180
           CSEIRAGHLSGDCHYKRE LRGFMK+RGHEQ      +CVRRRVMKS+TANPYC E AAK
Sbjct: 159 CSEIRAGHLSGDCHYKREFLRGFMKIRGHEQ------DCVRRRVMKSVTANPYCSEAAAK 218

Query: 181 DAMEAVWDICYNDTQPFDRAP 202
           DAMEAVWD+CYNDTQPFDRAP
Sbjct: 219 DAMEAVWDVCYNDTQPFDRAP 233

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BLAST of MELO3C021605.2 vs. TAIR10
Match: AT3G03420.1 (Ku70-binding family protein)

HSP 1 Score: 295.4 bits (755), Expect = 2.6e-80
Identity = 136/201 (67.66%), Postives = 160/201 (79.60%), Query Frame = 0


Query: 1   MAEESTPEPGSNRSYSSVTGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60
           M + + P  GS  +      G++ +EC+DMIRRS R P+VKFLME +EKSGC +GD F+K
Sbjct: 1   MEDAAAPNSGSEFN-PGARRGKSIDECQDMIRRSFRNPIVKFLMEQMEKSGCRVGDNFVK 60

Query: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA 120
           AV C   ++GGY +G GI VCSN++ IQDEVNQVVIHELIHA+D+CRA NLDW NC HHA
Sbjct: 61  AVVCTGPVAGGYTKGRGITVCSNYLTIQDEVNQVVIHELIHAYDECRAKNLDWTNCAHHA 120

Query: 121 CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQESGDGPECVRRRVMKSLTANPYCPEPAAK 180
           CSEIRAGHLSGDCH+KRELLRGF+KLRGHEQ      EC++RRV+KSL  NPYC E AAK
Sbjct: 121 CSEIRAGHLSGDCHFKRELLRGFIKLRGHEQ------ECIKRRVLKSLRGNPYCSEVAAK 180

Query: 181 DAMEAVWDICYNDTQPFDRAP 202
           DAMEAVWD CYNDT+PFDRAP
Sbjct: 181 DAMEAVWDTCYNDTKPFDRAP 194

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BLAST of MELO3C021605.2 vs. Swiss-Prot
Match: sp|P0CQ26|ATP23_CRYNJ (Mitochondrial inner membrane protease ATP23 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=ATP23 PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 8.7e-33
Identity = 69/176 (39.20%), Postives = 101/176 (57.39%), Query Frame = 0


Query: 25  EECEDMIRRSLR-TPMVKFLMEHLEKSGCGIGDRFIKAVHCEKQISGGYVRGEGIMVCSN 84
           ++CE   R  +  +PM+ FL+ HL+ +GC      ++   C +  +GG+    GI++C +
Sbjct: 56  DKCEGWKRDLMNYSPMITFLLNHLKLAGCPFPSSAMQCHPCPENRAGGFSPDHGILLCQD 115

Query: 85  HMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHACSEIRAGHLSGDCHYKRELLRGF 144
               +  +   + HEL+HAFD CR   +DW N  HHACSEIRA +LSGDC + RE+ RGF
Sbjct: 116 RFFNKKHMEDTLAHELVHAFDHCR-FKVDWGNLRHHACSEIRAANLSGDCRFTREVKRGF 175

Query: 145 MKLRGHEQESGDGPECVRRRVMKSLTANPYCPEP-AAKDAMEAVWDICYNDTQPFD 199
                  Q       CV+RR + S+ ANP C  P  A+ A+  VW+ C+ DT+PFD
Sbjct: 176 YAFNKQHQ------ACVKRRAILSVLANPACTSPEMAEKAVNEVWESCFTDTRPFD 224

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BLAST of MELO3C021605.2 vs. Swiss-Prot
Match: sp|P0CQ27|ATP23_CRYNB (Mitochondrial inner membrane protease ATP23 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=ATP23 PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.1e-32
Identity = 69/176 (39.20%), Postives = 101/176 (57.39%), Query Frame = 0


Query: 25  EECEDMIRRSLR-TPMVKFLMEHLEKSGCGIGDRFIKAVHCEKQISGGYVRGEGIMVCSN 84
           ++CE   R  +  +PM+ FL+ HL+ +GC      ++   C +  +GG+    GI++C +
Sbjct: 56  DKCEGWKRDLMNYSPMITFLLNHLKLAGCPFPSSAMQCHPCPENRAGGFSPDHGILLCQD 115

Query: 85  HMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHACSEIRAGHLSGDCHYKRELLRGF 144
               +  +   + HEL+HAFD CR   +DW N  HHACSEIRA +LSGDC + RE+ RGF
Sbjct: 116 RFFNKKHMEDTLAHELVHAFDHCR-FKVDWGNLRHHACSEIRAANLSGDCRFTREVKRGF 175

Query: 145 MKLRGHEQESGDGPECVRRRVMKSLTANPYCPEP-AAKDAMEAVWDICYNDTQPFD 199
                  Q       CV+RR + S+ ANP C  P  A+ A+  VW+ C+ DT+PFD
Sbjct: 176 YAFNKQHQ------ACVKRRAILSVLANPACTSPEMAERAVNEVWESCFTDTRPFD 224

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BLAST of MELO3C021605.2 vs. Swiss-Prot
Match: sp|Q6C253|ATP23_YARLI (Mitochondrial inner membrane protease ATP23 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=ATP23 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 5.2e-30
Identity = 64/165 (38.79%), Postives = 96/165 (58.18%), Query Frame = 0


Query: 37  TPMVKFLMEHLEKSGCGIGDRFIKAVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVI 96
           +P V+F+ + +EK G  I    +   HC+   +GG+    GI+VC NH+  +  +   + 
Sbjct: 90  SPTVRFMKDQIEKIGGDISSNNVFCDHCDDFKAGGFHPKYGILVCQNHVKSRSHLEDTLA 149

Query: 97  HELIHAFDDCRAANLDWANCTHHACSEIRAGHLSGDCHYKRELLRGFMK--LRGHEQESG 156
           HE++H +D+ +   +DW N  HHACSEIRA  LSG+C    EL++G +    RGH+    
Sbjct: 150 HEMVHYYDNTK-FKVDWMNLKHHACSEIRASTLSGECRMMNELMKGKLARLTRGHQ---- 209

Query: 157 DGPECVRRRVMKSLTANPYCPEPA-AKDAMEAVWDICYNDTQPFD 199
              EC +RR + S+ ANP C + A A   +  VWD C+NDT+PFD
Sbjct: 210 ---ECAKRRAILSVMANPGCKDEAQATQVVNEVWDSCFNDTRPFD 246

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BLAST of MELO3C021605.2 vs. Swiss-Prot
Match: sp|Q7T0P7|ATP23_XENLA (Mitochondrial inner membrane protease ATP23 homolog OS=Xenopus laevis OX=8355 GN=atp23 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.5e-29
Identity = 77/203 (37.93%), Postives = 116/203 (57.14%), Query Frame = 0


Query: 7   PEPGSNRSYSSVTGGRT----KEECEDMIRRSLRT-PMVKFLMEHLEKSGCGI-GDRFIK 66
           PE G+  S  +    ++      +C+ M++ +L T P  K L++ +++SGC +  DR   
Sbjct: 17  PERGNGESKKNSILSKSLFSFNHKCQLMLKIALDTSPYAKLLLDAMKQSGCTVYKDRHFS 76

Query: 67  AVHCEKQISGGY-VRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHH 126
              C+  +SGG+      I++C N+++ Q  +N+VV HELIHAFD CR A++DW N   H
Sbjct: 77  CEECDGSVSGGFDAATSEIVLCQNNIHQQSHMNRVVTHELIHAFDHCR-AHVDWFNNVRH 136

Query: 127 -ACSEIRAGHLSGDCHYKRELLRGFMKLRGHEQESGDGPECVRRRVMKSLTANPYCPEPA 186
            ACSEIRA +LSGDC    EL R    ++GH Q       CVR R ++S+ A        
Sbjct: 137 LACSEIRAANLSGDCTLANELTRFKFGVKGHHQ------VCVRDRALRSILAVRNISRET 196

Query: 187 AKDAMEAVWDICYNDTQPFDRAP 202
           A+ A++ V+D C+ND +PF R P
Sbjct: 197 AEKAVDEVFDSCFNDHEPFGRIP 212

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BLAST of MELO3C021605.2 vs. Swiss-Prot
Match: sp|Q9Y6H3|ATP23_HUMAN (Mitochondrial inner membrane protease ATP23 homolog OS=Homo sapiens OX=9606 GN=ATP23 PE=1 SV=3)

HSP 1 Score: 128.3 bits (321), Expect = 9.9e-29
Identity = 71/183 (38.80%), Postives = 106/183 (57.92%), Query Frame = 0


Query: 23  TKEECEDMIRRSLRT-PMVKFLMEHLEKSGCGIG-DRFIKAVHCEKQISGGY-VRGEGIM 82
           + ++C+  + ++L T P VK L++ ++ SGC +  DR      C   +SGG+      I+
Sbjct: 48  SNQKCQLRLLKTLETNPYVKLLLDAMKHSGCAVNKDRHFSCEDCNGNVSGGFDASTSQIV 107

Query: 83  VCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDW-ANCTHHACSEIRAGHLSGDCHYKRE 142
           +C N+++ Q  +N+VV HELIHAFD CR A++DW  N  H ACSE+RA +LSGDC    E
Sbjct: 108 LCQNNIHNQAHMNRVVTHELIHAFDHCR-AHVDWFTNIRHLACSEVRAANLSGDCSLVNE 167

Query: 143 LLRGFMKLRGHEQESGDGPECVRRRVMKSLTANPYCPEPAAKDAMEAVWDICYNDTQPFD 202
           + R    L+ H Q       CVR R   S+ A     +  AK A++ V++ C+ND +PF 
Sbjct: 168 IFRLHFGLKQHHQ------TCVRDRATLSILAVRNISKEVAKKAVDEVFESCFNDHEPFG 223

[Close]

BLAST of MELO3C021605.2 vs. TrEMBL
Match: tr|A0A1S3CA25|A0A1S3CA25_CUCME (Mitochondrial inner membrane protease ATP23 OS=Cucumis melo OX=3656 GN=LOC103498128 PE=3 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 3.4e-111
Identity = 195/201 (97.01%), Postives = 195/201 (97.01%), Query Frame = 0


Query: 1   MAEESTPEPGSNRSYSSVTGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60
           MAEESTPEPGSNRSYSSVTGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK
Sbjct: 1   MAEESTPEPGSNRSYSSVTGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60

Query: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA 120
           AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA
Sbjct: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA 120

Query: 121 CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQESGDGPECVRRRVMKSLTANPYCPEPAAK 180
           CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQ      ECVRRRVMKSLTANPYCPEPAAK
Sbjct: 121 CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQ------ECVRRRVMKSLTANPYCPEPAAK 180

Query: 181 DAMEAVWDICYNDTQPFDRAP 202
           DAMEAVWDICYNDTQPFDRAP
Sbjct: 181 DAMEAVWDICYNDTQPFDRAP 195

[Close]

BLAST of MELO3C021605.2 vs. TrEMBL
Match: tr|A0A0A0KSC7|A0A0A0KSC7_CUCSA (Mitochondrial inner membrane protease ATP23 OS=Cucumis sativus OX=3659 GN=Csa_5G517840 PE=3 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 5.5e-109
Identity = 191/201 (95.02%), Postives = 192/201 (95.52%), Query Frame = 0


Query: 1   MAEESTPEPGSNRSYSSVTGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60
           MAEESTPEPGSNRSYSSV GGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK
Sbjct: 1   MAEESTPEPGSNRSYSSVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60

Query: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA 120
           AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA
Sbjct: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA 120

Query: 121 CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQESGDGPECVRRRVMKSLTANPYCPEPAAK 180
           CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQ      ECVRRRVMKSL ANPYCPE AAK
Sbjct: 121 CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQ------ECVRRRVMKSLVANPYCPEAAAK 180

Query: 181 DAMEAVWDICYNDTQPFDRAP 202
           DAMEAVWD+CYNDTQPFDRAP
Sbjct: 181 DAMEAVWDVCYNDTQPFDRAP 195

[Close]

BLAST of MELO3C021605.2 vs. TrEMBL
Match: tr|A0A2P6S5Y4|A0A2P6S5Y4_ROSCH (Mitochondrial inner membrane protease ATP23 OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0173661 PE=3 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 2.4e-96
Identity = 167/201 (83.08%), Postives = 182/201 (90.55%), Query Frame = 0


Query: 1   MAEESTPEPGSNRSYSSVTGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60
           MA+E TPEPG++ S S+V GG+T  EC+DMIRRSLRTPMVKFL+EHLEKSGCGIGD FIK
Sbjct: 39  MADEPTPEPGTSTSPSAVNGGKTVNECQDMIRRSLRTPMVKFLLEHLEKSGCGIGDGFIK 98

Query: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA 120
           AVHCEK+I+GGY RG GIMVCSNHMN+QDEVNQVVIHELIHAFDDCRAANL+WANC HHA
Sbjct: 99  AVHCEKKIAGGYTRGGGIMVCSNHMNMQDEVNQVVIHELIHAFDDCRAANLNWANCAHHA 158

Query: 121 CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQESGDGPECVRRRVMKSLTANPYCPEPAAK 180
           CSEIRAGHLSGDCHYKRE LRGFMK+RGHEQ      +CVRRRVMKS+TANPYC E AAK
Sbjct: 159 CSEIRAGHLSGDCHYKREFLRGFMKIRGHEQ------DCVRRRVMKSVTANPYCSEAAAK 218

Query: 181 DAMEAVWDICYNDTQPFDRAP 202
           DAMEAVWD+CYNDTQPFDRAP
Sbjct: 219 DAMEAVWDVCYNDTQPFDRAP 233

[Close]

BLAST of MELO3C021605.2 vs. TrEMBL
Match: tr|M5WXF5|M5WXF5_PRUPE (Mitochondrial inner membrane protease ATP23 OS=Prunus persica OX=3760 GN=PRUPE_3G296400 PE=3 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 2.9e-94
Identity = 162/201 (80.60%), Postives = 181/201 (90.05%), Query Frame = 0


Query: 1   MAEESTPEPGSNRSYSSVTGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60
           MA+E  PEPGS+   S+V GG+T EEC+DMI+RSLR PMVKFL++HLE++GCGIGDRFIK
Sbjct: 1   MADEPAPEPGSSSFSSAVNGGKTLEECQDMIQRSLRIPMVKFLLKHLEQAGCGIGDRFIK 60

Query: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA 120
           AVHC+KQI+GGY RGEGI+VC NHMNIQDEVNQVVIHELIHAFDDCRAANL+WANC HHA
Sbjct: 61  AVHCDKQIAGGYARGEGILVCGNHMNIQDEVNQVVIHELIHAFDDCRAANLNWANCAHHA 120

Query: 121 CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQESGDGPECVRRRVMKSLTANPYCPEPAAK 180
           CSEIRAGHLSGDCHYKRELLRGF+K+RGHEQ      +CVRRRVMKS+ ANPYC E AAK
Sbjct: 121 CSEIRAGHLSGDCHYKRELLRGFVKIRGHEQ------DCVRRRVMKSVIANPYCSEAAAK 180

Query: 181 DAMEAVWDICYNDTQPFDRAP 202
           DAMEAVWD+CYNDTQPFDRAP
Sbjct: 181 DAMEAVWDVCYNDTQPFDRAP 195

[Close]

BLAST of MELO3C021605.2 vs. TrEMBL
Match: tr|A0A2P4J4N0|A0A2P4J4N0_QUESU (Mitochondrial inner membrane protease ATP23 OS=Quercus suber OX=58331 GN=CFP56_23254 PE=3 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 8.5e-94
Identity = 166/201 (82.59%), Postives = 177/201 (88.06%), Query Frame = 0


Query: 1   MAEESTPEPGSNRSYSSVTGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGCGIGDRFIK 60
           MAEE  PEPGS    S+  GGR+ EEC+ MI+RSLRTP+VKFL EHLEKSGC +GD+FIK
Sbjct: 1   MAEEPIPEPGSGPISSASNGGRSIEECQSMIQRSLRTPIVKFLREHLEKSGCVLGDKFIK 60

Query: 61  AVHCEKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHA 120
           AVHC KQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHA+DDCRA NLDWANC HHA
Sbjct: 61  AVHCNKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAYDDCRAGNLDWANCAHHA 120

Query: 121 CSEIRAGHLSGDCHYKRELLRGFMKLRGHEQESGDGPECVRRRVMKSLTANPYCPEPAAK 180
           CSEIRAGHLSGDCHYKRELLRG+MKLRGHEQ      +CVRRRVMKS+ ANPYC E AAK
Sbjct: 121 CSEIRAGHLSGDCHYKRELLRGYMKLRGHEQ------DCVRRRVMKSVIANPYCSEAAAK 180

Query: 181 DAMEAVWDICYNDTQPFDRAP 202
           DAMEAVWDICYNDTQPFDRAP
Sbjct: 181 DAMEAVWDICYNDTQPFDRAP 195

The following BLAST results are available for this feature:

BLAST of MELO3C021605.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458847.1	5.2e-111	97.01	PREDICTED: mitochondrial inner membrane protease ATP23 [Cucumis melo]	[more]
XP_011655379.1	8.3e-109	95.02	PREDICTED: mitochondrial inner membrane protease ATP23 [Cucumis sativus] >KGN513...	[more]
XP_022133506.1	6.2e-104	89.55	mitochondrial inner membrane protease ATP23 [Momordica charantia]	[more]
XP_022922282.1	2.3e-103	89.55	mitochondrial inner membrane protease ATP23 [Cucurbita moschata] >XP_022990978.1...	[more]
XP_024183326.1	3.6e-96	83.08	mitochondrial inner membrane protease ATP23 [Rosa chinensis] >PRQ54086.1 putativ...	[more]

BLAST of MELO3C021605.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G03420.1	2.6e-80	67.66	Ku70-binding family protein	[more]

BLAST of MELO3C021605.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P0CQ26\|ATP23_CRYNJ	8.7e-33	39.20	Mitochondrial inner membrane protease ATP23 OS=Cryptococcus neoformans var. neof...	[more]
sp\|P0CQ27\|ATP23_CRYNB	1.1e-32	39.20	Mitochondrial inner membrane protease ATP23 OS=Cryptococcus neoformans var. neof...	[more]
sp\|Q6C253\|ATP23_YARLI	5.2e-30	38.79	Mitochondrial inner membrane protease ATP23 OS=Yarrowia lipolytica (strain CLIB ...	[more]
sp\|Q7T0P7\|ATP23_XENLA	1.5e-29	37.93	Mitochondrial inner membrane protease ATP23 homolog OS=Xenopus laevis OX=8355 GN...	[more]
sp\|Q9Y6H3\|ATP23_HUMAN	9.9e-29	38.80	Mitochondrial inner membrane protease ATP23 homolog OS=Homo sapiens OX=9606 GN=A...	[more]

BLAST of MELO3C021605.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CA25\|A0A1S3CA25_CUCME	3.4e-111	97.01	Mitochondrial inner membrane protease ATP23 OS=Cucumis melo OX=3656 GN=LOC103498...	[more]
tr\|A0A0A0KSC7\|A0A0A0KSC7_CUCSA	5.5e-109	95.02	Mitochondrial inner membrane protease ATP23 OS=Cucumis sativus OX=3659 GN=Csa_5G...	[more]
tr\|A0A2P6S5Y4\|A0A2P6S5Y4_ROSCH	2.4e-96	83.08	Mitochondrial inner membrane protease ATP23 OS=Rosa chinensis OX=74649 GN=RchiOB...	[more]
tr\|M5WXF5\|M5WXF5_PRUPE	2.9e-94	80.60	Mitochondrial inner membrane protease ATP23 OS=Prunus persica OX=3760 GN=PRUPE_3...	[more]
tr\|A0A2P4J4N0\|A0A2P4J4N0_QUESU	8.5e-94	82.59	Mitochondrial inner membrane protease ATP23 OS=Quercus suber OX=58331 GN=CFP56_2...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004222	metalloendopeptidase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR019165	Peptidase_M76_ATP23

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C021605.2.1	MELO3C021605.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019165	Peptidase M76, ATP23	PFAM	PF09768	Peptidase_M76	coord: 25..198 e-value: 8.7E-56 score: 188.3
IPR019165	Peptidase M76, ATP23	PANTHER	PTHR21711	KUB3-PROV PROTEIN	coord: 4..201
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR21711:SF2	SUBFAMILY NOT NAMED	coord: 4..201

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C021605.2	Csa5G517840	Cucumber (Chinese Long) v2	cumedB338
MELO3C021605.2	CSPI05G17980	Wild cucumber (PI 183967)	cpimedB340
MELO3C021605.2	Cucsa.011040	Cucumber (Gy14) v1	cgymedB331
MELO3C021605.2	CmaCh15G003710	Cucurbita maxima (Rimu)	cmamedB285
MELO3C021605.2	CmaCh04G026650	Cucurbita maxima (Rimu)	cmamedB720
MELO3C021605.2	CmoCh15G003830	Cucurbita moschata (Rifu)	cmomedB271
MELO3C021605.2	CmoCh04G027930	Cucurbita moschata (Rifu)	cmomedB713
MELO3C021605.2	Lsi02G016110	Bottle gourd (USVL1VR-Ls)	lsimedB171
MELO3C021605.2	Cp4.1LG01g23620	Cucurbita pepo (Zucchini)	cpemedB418
MELO3C021605.2	CsGy5G017660	Cucumber (Gy14) v2	cgybmedB300
MELO3C021605.2	Cla004640	Watermelon (97103) v1	medwmB001
MELO3C021605.2	ClCG09G019490	Watermelon (Charleston Gray)	medwcgB000
MELO3C021605.2	Cla97C09G180930	Watermelon (97103) v2	medwmbB034
MELO3C021605.2	Bhi06G000497	Wax gourd	medwgoB020
MELO3C021605.2	Carg04479	Silver-seed gourd	carmedB0694
MELO3C021605.2	Carg02334	Silver-seed gourd	carmedB0270
MELO3C021605.2	CsaV3_5G026890	Cucumber (Chinese Long) v3	cucmedB351

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C021605.2	Cucurbita pepo (Zucchini)	cpemedB182