Cucsa.011040.3 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.011040.3
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Mitochondrial inner membrane protease ATP23
Location	scaffold00154 : 369562 .. 372095 (+)
Sequence length	1101

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTGAAACTTAGAGGCTTAAACATGGCGGAAGAATCCACGCCGGAACCTGGATCAAATCGTTCGTATTCTTCCGTCAACGGTGGCCGGACTAAGGAGGAATGCGAGGATATGATTCGAAGAAGTCTCCGAAGTATGAATTACAACTATATTCTTTCCTCTTCATTCGTTTCCTCAACATCTGGGACCCTAAACCCCAACATATTTTCGGGGTTTAGGGTTTTACGACTTTCCTTAATTTCCAGGTTATTTGAAAAATTAGAACTTCCTGTCTTGTTCTCACGGGTCATTCTATCTATTTCTGCGTCTCTCAGCTCCGATGGTGAAATTCTTGATGGAGCACTTGGAGAAATCTGGATGTGGGATTGGGGATAGGTTTATTAAGGCTGTTCATTGCGAGAAGCAGATCAGTGGTGGTTATGTTCGTGGTGAAGGGGTAATTATAATCTCCTCTCTTTGTTTCTGCATATGCTTTTAAATGAATACCTTACTTTTTACCTTATCGTTGAGAATGAATAAACAAAATTTGGATAGTTAGAAAAGGAATGGGGAGGAAGAGACTGTTGAACACTGATTTCTTTGCTGTGCCCTGTTTTTtGGTTTTAGATAATGGTGTGTAGTAACCACATGAACATTCAAGATGAGGTGAACCAAGTAGTAATTCATGAGCTTATTCATGCTTTTGATGATTGTCGAGCGGCAAACTTGGATTGGGCTAATTGTACTCATCATGCTTGCAGTGAGGTGTGCATCTACATTTAGCCATTTAACCATTTCCTTTCACAAATTGAGTCTTTTTtCCCCATATGTTTACATTATTTTGTTTTGGGACTTTCTAACGTACATACATTTGGAATTTAGATTCGTGCTGGACATTTAAGTGGTGATTGCCACTATAAACGGGAACTATTGCGAGGTTTCATGAAATTACGAGGCCATGAGCAAGTATGATTTTCTTTCACTTCCTTTTTGGAAAGAACATAATAGTCTTACCTCTTATTCGCGTCTAAATATGAGCATGAGTTTGTAGTCCATGATATCTCAAATTTGATTTCTTTGACACTGTTCATACCCTCTTGCTTAAATAGGTGAACAGCATTCATGAAAATGCTTAGAGTAGTGATAAATATTTGGCGTTGGATCAAGGACTAATGAACATGAATCACTTGGAAGTTGTAAATTTTTTtGTACCTTTTGAGCTAATTTCTTTGCACTCTGCTGATAGATAAGTTACACTTTTACGTTTCTCAAGTCTTTATGTTACACTAGAGAACTTTTCTCATGGTAGAACTTAAAATCTGCGTGTATGCTCATGCTAACTTGAATCTGATCTTGGAAATGAATATGATTGTATAAATGTTTTCAGTCATTCTATCTTTTAACTTTTGGCTTGTAATCTTTAGTCACAATAAGTATTTTTATGCTCAAGTATTCACATTTCCCTCGGCCCTCGGCTAAACTAGCTCAATTTTTTtATATCCGTAAGTGTTTGGACCAGCTTACGTGTACCTTGACTAATCTCACGGACAACCGATCTGACCTTACAACATTTGGGTATAAGGAAACTCCTAGGAAATTAATTCCTAGTAAGTGGCTACCATGAATTAAACTCATGACCTCTTAGTTAGTTTTCCTATTTATCACTAGGTTAATTCATGATGGTTTCTAAACTGAACAAGAGGAGTGAGAGTGAAAGTCCTATTTTTTGGATAGGAGAATGAAACATGATATTAGCAGGATCTTTTGGGAAGACTTATCTTGAAGCCATGTGTATTGAGTTCATTTCTGTTTTTtCTCAATGGCTAATATTTGGAAGAAGCCTAGGTTTATGCAACTCTAAAATTAAGAGGTGCAATTGGGGGACTATTATAAGTCGTTTTGGTTGTTATATGTAGGAGAGTGGCGATGGACCGGTGACCTAACCACGTGTGGATGTTTGATGATCAGCATTTTTTATTCTTTCTTCTAACAAAACCTGTTCTCACATTTTTCTTTTCTTCTTCATCCATGAACATTAGGTGAACTACATTCCATTGAGCTCTTTTGGATAGGTTTCCATTGACTTTTTTCTTTTCTATAGGAATGTGTGAGAAGAAGAGTCATGAAATCACTGGTGGCTAATCCTTACTGCCCAGAAGCTGCTGCAAAAGATGCCATGGAAGCTGTATGGGATGTTTGTTATAATGATACACAGCCATTTGATAGAGCTCCCTAAAACTTGGAATATAGTCATTTCATCAACCAAGAACAAAGCAGCCACTGCTCCTAATTTAATGGTGCTGTGCCAAAAAGAACAACAGGTTTTCTTCCCAAGTTTTAGATTGCTTAAATTTTGGAGAGAATTTATTTGCCTTGAGCAGTTCGATTACGATCGATGGTTTTATTCCATTATAGACATTCCCATTTTTGTTGCTTCTGATTCCATACCATTTATAATAGATAAACTTATTGCAGAATACATCTAAATGTGTTGAAGCAAATAAAACGTGATTTAGCTCCTCTTTTGAAAGTATGAGAAGTTTAACATTTGTGAA

mRNA sequence

AAATTGAAACTTAGAGGCTTAAACATGGCGGAAGAATCCACGCCGGAACCTGGATCAAATCGTTCGTATTCTTCCGTCAACGGTGGCCGGACTAAGGAGGAATGCGAGGATATGATTCGAAGAAGTCTCCGAACTCCGATGGTGAAATTCTTGATGGAGCACTTGGAGAAATCTGGATGTGGGATTGGGGATAGGTTTATTAAGGCTGTTCATTGCGAGAAGCAGATCAGTGGTGGTTATGTTCGTGGTGAAGGGGTAATTATAATCTCCTCTCTTTGTTTCTGCATATGCTTTTAAATGAATACCTTACTTTTTACCTTATCGTTGAGAATGAATAAACAAAATTTGGATAGTTAGAAAAGGAATGGGGAGGAAGAGACTGTTGAACACTGATTTCTTTGCTGTGCCCTGTTTTTTGGTTTTAGATAATGGTGTGTAGTAACCACATGAACATTCAAGATGAGGTGAACCAAGTAGTAATTCATGAGCTTATTCATGCTTTTGATGATTGTCGAGCGGCAAACTTGGATTGGGCTAATTGTACTCATCATGCTTGCAGTGAGATTCGTGCTGGACATTTAAGTGGTGATTGCCACTATAAACGGGAACTATTGCGAGGTTTCATGAAATTACGAGGCCATGAGCAAGAATGTGTGAGAAGAAGAGTCATGAAATCACTGGTGGCTAATCCTTACTGCCCAGAAGCTGCTGCAAAAGATGCCATGGAAGCTGTATGGGATGTTTGTTATAATGATACACAGCCATTTGATAGAGCTCCCTAAAACTTGGAATATAGTCATTTCATCAACCAAGAACAAAGCAGCCACTGCTCCTAATTTAATGGTGCTGTGCCAAAAAGAACAACAGGTTTTCTTCCCAAGTTTTAGATTGCTTAAATTTTGGAGAGAATTTATTTGCCTTGAGCAGTTCGATTACGATCGATGGTTTTATTCCATTATAGACATTCCCATTTTTGTTGCTTCTGATTCCATACCATTTATAATAGATAAACTTATTGCAGAATACATCTAAATGTGTTGAAGCAAATAAAACGTGATTTAGCTCCTCTTTTGAAAGTATGAGAAGTTTAACATTTGTGAA

Coding sequence (CDS)

ATGGTGTGTAGTAACCACATGAACATTCAAGATGAGGTGAACCAAGTAGTAATTCATGAGCTTATTCATGCTTTTGATGATTGTCGAGCGGCAAACTTGGATTGGGCTAATTGTACTCATCATGCTTGCAGTGAGATTCGTGCTGGACATTTAAGTGGTGATTGCCACTATAAACGGGAACTATTGCGAGGTTTCATGAAATTACGAGGCCATGAGCAAGAATGTGTGAGAAGAAGAGTCATGAAATCACTGGTGGCTAATCCTTACTGCCCAGAAGCTGCTGCAAAAGATGCCATGGAAGCTGTATGGGATGTTTGTTATAATGATACACAGCCATTTGATAGAGCTCCCTAA

Protein sequence

MVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHACSEIRAGHLSGDCHYKRELLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAVWDVCYNDTQPFDRAP*

Homology

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BLAST of Cucsa.011040.3 vs. Swiss-Prot
Match: ATP23_CRYNJ (Mitochondrial inner membrane protease ATP23 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=ATP23 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.3e-25
Identity = 55/116 (47.41%), Postives = 74/116 (63.79%), Query Frame = 1


Query: 1   MVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHACSEIRAGHLSGDCHYKRE 60
           ++C +    +  +   + HEL+HAFD CR   +DW N  HHACSEIRA +LSGDC + RE
Sbjct: 111 LLCQDRFFNKKHMEDTLAHELVHAFDHCRF-KVDWGNLRHHACSEIRAANLSGDCRFTRE 170

Query: 61  LLRGFMKLRGHEQECVRRRVMKSLVANPYC--PEAAAKDAMEAVWDVCYNDTQPFD 115
           + RGF       Q CV+RR + S++ANP C  PE A K A+  VW+ C+ DT+PFD
Sbjct: 171 VKRGFYAFNKQHQACVKRRAILSVLANPACTSPEMAEK-AVNEVWESCFTDTRPFD 224

[Close]

BLAST of Cucsa.011040.3 vs. Swiss-Prot
Match: ATP23_CRYNB (Mitochondrial inner membrane protease ATP23 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=ATP23 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 2.9e-25
Identity = 54/116 (46.55%), Postives = 74/116 (63.79%), Query Frame = 1


Query: 1   MVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHACSEIRAGHLSGDCHYKRE 60
           ++C +    +  +   + HEL+HAFD CR   +DW N  HHACSEIRA +LSGDC + RE
Sbjct: 111 LLCQDRFFNKKHMEDTLAHELVHAFDHCRF-KVDWGNLRHHACSEIRAANLSGDCRFTRE 170

Query: 61  LLRGFMKLRGHEQECVRRRVMKSLVANPYC--PEAAAKDAMEAVWDVCYNDTQPFD 115
           + RGF       Q CV+RR + S++ANP C  PE A + A+  VW+ C+ DT+PFD
Sbjct: 171 VKRGFYAFNKQHQACVKRRAILSVLANPACTSPEMAER-AVNEVWESCFTDTRPFD 224

[Close]

BLAST of Cucsa.011040.3 vs. Swiss-Prot
Match: ATP23_XENLA (Mitochondrial inner membrane protease ATP23 homolog OS=Xenopus laevis GN=atp23 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.5e-24
Identity = 56/118 (47.46%), Postives = 78/118 (66.10%), Query Frame = 1


Query: 1   MVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHH-ACSEIRAGHLSGDCHYKR 60
           ++C N+++ Q  +N+VV HELIHAFD CR A++DW N   H ACSEIRA +LSGDC    
Sbjct: 96  VLCQNNIHQQSHMNRVVTHELIHAFDHCR-AHVDWFNNVRHLACSEIRAANLSGDCTLAN 155

Query: 61  ELLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAVWDVCYNDTQPFDRAP 118
           EL R    ++GH Q CVR R ++S++A        A+ A++ V+D C+ND +PF R P
Sbjct: 156 ELTRFKFGVKGHHQVCVRDRALRSILAVRNISRETAEKAVDEVFDSCFNDHEPFGRIP 212

[Close]

BLAST of Cucsa.011040.3 vs. Swiss-Prot
Match: ATP23_YARLI (Mitochondrial inner membrane protease ATP23 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=ATP23 PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 4.2e-24
Identity = 53/117 (45.30%), Postives = 75/117 (64.10%), Query Frame = 1


Query: 1   MVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHACSEIRAGHLSGDCHYKRE 60
           +VC NH+  +  +   + HE++H +D+ +   +DW N  HHACSEIRA  LSG+C    E
Sbjct: 132 LVCQNHVKSRSHLEDTLAHEMVHYYDNTKF-KVDWMNLKHHACSEIRASTLSGECRMMNE 191

Query: 61  LLRGFMK--LRGHEQECVRRRVMKSLVANPYC-PEAAAKDAMEAVWDVCYNDTQPFD 115
           L++G +    RGH QEC +RR + S++ANP C  EA A   +  VWD C+NDT+PFD
Sbjct: 192 LMKGKLARLTRGH-QECAKRRAILSVMANPGCKDEAQATQVVNEVWDSCFNDTRPFD 246

[Close]

BLAST of Cucsa.011040.3 vs. Swiss-Prot
Match: ATP23_DANRE (Mitochondrial inner membrane protease ATP23 homolog OS=Danio rerio GN=atp23 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.7e-23
Identity = 56/118 (47.46%), Postives = 76/118 (64.41%), Query Frame = 1


Query: 1   MVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDW-ANCTHHACSEIRAGHLSGDCHYKR 60
           ++C N+++ Q  +N+VV HELIHAFD CR A +DW +N  H ACSEIRA +LSGDC +  
Sbjct: 115 VLCQNNIHQQAHMNRVVTHELIHAFDHCR-AQVDWFSNYRHLACSEIRAANLSGDCSFIN 174

Query: 61  ELLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAVWDVCYNDTQPFDRAP 118
           E  R    LR H QECVR R ++S++A        A+  ++ V+D C+ND  PF R P
Sbjct: 175 EFSRFNFGLRKHHQECVRGRALRSILAVRRVSREEAERVVDEVFDSCFNDHAPFGRIP 231

[Close]

BLAST of Cucsa.011040.3 vs. TrEMBL
Match: A0A0A0KSC7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517840 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 2.0e-65
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1


Query: 1   MVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHACSEIRAGHLSGDCHYKRE 60
           MVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHACSEIRAGHLSGDCHYKRE
Sbjct: 79  MVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHACSEIRAGHLSGDCHYKRE 138

Query: 61  LLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAVWDVCYNDTQPFDRAP 118
           LLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAVWDVCYNDTQPFDRAP
Sbjct: 139 LLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAVWDVCYNDTQPFDRAP 195

[Close]

BLAST of Cucsa.011040.3 vs. TrEMBL
Match: B9SLT5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0531760 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 2.3e-61
Identity = 107/117 (91.45%), Postives = 115/117 (98.29%), Query Frame = 1


Query: 1   MVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHACSEIRAGHLSGDCHYKRE 60
           +VCSNHMN+QDEVNQVVIHELIHA+DDCRAANLDWANC HHACSEIRAGHLSGDCHYKRE
Sbjct: 71  VVCSNHMNMQDEVNQVVIHELIHAYDDCRAANLDWANCVHHACSEIRAGHLSGDCHYKRE 130

Query: 61  LLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAVWDVCYNDTQPFDRAP 118
           LLRG+MK+RGHEQECVRRRVMKS++ANPYC EAAAKDAMEAVWDVCYNDT+PFDRAP
Sbjct: 131 LLRGYMKIRGHEQECVRRRVMKSMIANPYCSEAAAKDAMEAVWDVCYNDTKPFDRAP 187

[Close]

BLAST of Cucsa.011040.3 vs. TrEMBL
Match: M5WXF5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011801mg PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 5.2e-61
Identity = 107/117 (91.45%), Postives = 114/117 (97.44%), Query Frame = 1


Query: 1   MVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHACSEIRAGHLSGDCHYKRE 60
           +VC NHMNIQDEVNQVVIHELIHAFDDCRAANL+WANC HHACSEIRAGHLSGDCHYKRE
Sbjct: 79  LVCGNHMNIQDEVNQVVIHELIHAFDDCRAANLNWANCAHHACSEIRAGHLSGDCHYKRE 138

Query: 61  LLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAVWDVCYNDTQPFDRAP 118
           LLRGF+K+RGHEQ+CVRRRVMKS++ANPYC EAAAKDAMEAVWDVCYNDTQPFDRAP
Sbjct: 139 LLRGFVKIRGHEQDCVRRRVMKSVIANPYCSEAAAKDAMEAVWDVCYNDTQPFDRAP 195

[Close]

BLAST of Cucsa.011040.3 vs. TrEMBL
Match: A0A068V9K1_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00019080001 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 8.8e-61
Identity = 107/117 (91.45%), Postives = 113/117 (96.58%), Query Frame = 1


Query: 1   MVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHACSEIRAGHLSGDCHYKRE 60
           MVCSNHMNIQDEVNQVVIHELIHA+DDCRAANLDW NC HHACSEIRAGHLSGDCHYKRE
Sbjct: 79  MVCSNHMNIQDEVNQVVIHELIHAYDDCRAANLDWTNCAHHACSEIRAGHLSGDCHYKRE 138

Query: 61  LLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAVWDVCYNDTQPFDRAP 118
            LRGFMK+RGHEQ+CVRRRVMKS++ANPYC EAAAKDAMEAVWDVCYNDT+PFDRAP
Sbjct: 139 FLRGFMKVRGHEQDCVRRRVMKSVMANPYCSEAAAKDAMEAVWDVCYNDTKPFDRAP 195

[Close]

BLAST of Cucsa.011040.3 vs. TrEMBL
Match: W9R362_9ROSA (Mitochondrial inner membrane protease ATP23 OS=Morus notabilis GN=L484_017764 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 1.1e-60
Identity = 105/117 (89.74%), Postives = 115/117 (98.29%), Query Frame = 1


Query: 1   MVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHACSEIRAGHLSGDCHYKRE 60
           +VCSNHMNIQD+VNQVVIHELIHA+DDCRAANLDWANC HHACSEIRAGHLSGDCHYKRE
Sbjct: 76  IVCSNHMNIQDDVNQVVIHELIHAYDDCRAANLDWANCAHHACSEIRAGHLSGDCHYKRE 135

Query: 61  LLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAVWDVCYNDTQPFDRAP 118
           LLRGF+K+RGHEQ+CVRRRVMKS++ANPYC EAAAKDAMEAVWD+CYNDT+PFDRAP
Sbjct: 136 LLRGFVKIRGHEQDCVRRRVMKSVIANPYCSEAAAKDAMEAVWDICYNDTKPFDRAP 192

[Close]

BLAST of Cucsa.011040.3 vs. TAIR10
Match: AT3G03420.1 (AT3G03420.1 Ku70-binding family protein)

HSP 1 Score: 222.6 bits (566), Expect = 1.3e-58
Identity = 97/116 (83.62%), Postives = 107/116 (92.24%), Query Frame = 1


Query: 2   VCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHACSEIRAGHLSGDCHYKREL 61
           VCSN++ IQDEVNQVVIHELIHA+D+CRA NLDW NC HHACSEIRAGHLSGDCH+KREL
Sbjct: 79  VCSNYLTIQDEVNQVVIHELIHAYDECRAKNLDWTNCAHHACSEIRAGHLSGDCHFKREL 138

Query: 62  LRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAVWDVCYNDTQPFDRAP 118
           LRGF+KLRGHEQEC++RRV+KSL  NPYC E AAKDAMEAVWD CYNDT+PFDRAP
Sbjct: 139 LRGFIKLRGHEQECIKRRVLKSLRGNPYCSEVAAKDAMEAVWDTCYNDTKPFDRAP 194

[Close]

BLAST of Cucsa.011040.3 vs. NCBI nr
Match: gi|778703521|ref|XP_011655379.1| (PREDICTED: mitochondrial inner membrane protease ATP23 [Cucumis sativus])

HSP 1 Score: 256.1 bits (653), Expect = 2.9e-65
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1


Query: 1   MVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHACSEIRAGHLSGDCHYKRE 60
           MVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHACSEIRAGHLSGDCHYKRE
Sbjct: 79  MVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHACSEIRAGHLSGDCHYKRE 138

Query: 61  LLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAVWDVCYNDTQPFDRAP 118
           LLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAVWDVCYNDTQPFDRAP
Sbjct: 139 LLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAVWDVCYNDTQPFDRAP 195

[Close]

BLAST of Cucsa.011040.3 vs. NCBI nr
Match: gi|659117903|ref|XP_008458847.1| (PREDICTED: mitochondrial inner membrane protease ATP23 [Cucumis melo])

HSP 1 Score: 252.3 bits (643), Expect = 4.2e-64
Identity = 114/117 (97.44%), Postives = 115/117 (98.29%), Query Frame = 1


Query: 1   MVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHACSEIRAGHLSGDCHYKRE 60
           MVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHACSEIRAGHLSGDCHYKRE
Sbjct: 79  MVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHACSEIRAGHLSGDCHYKRE 138

Query: 61  LLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAVWDVCYNDTQPFDRAP 118
           LLRGFMKLRGHEQECVRRRVMKSL ANPYCPE AAKDAMEAVWD+CYNDTQPFDRAP
Sbjct: 139 LLRGFMKLRGHEQECVRRRVMKSLTANPYCPEPAAKDAMEAVWDICYNDTQPFDRAP 195

[Close]

BLAST of Cucsa.011040.3 vs. NCBI nr
Match: gi|255572026|ref|XP_002526954.1| (PREDICTED: mitochondrial inner membrane protease ATP23 [Ricinus communis])

HSP 1 Score: 242.7 bits (618), Expect = 3.3e-61
Identity = 107/117 (91.45%), Postives = 115/117 (98.29%), Query Frame = 1


Query: 1   MVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHACSEIRAGHLSGDCHYKRE 60
           +VCSNHMN+QDEVNQVVIHELIHA+DDCRAANLDWANC HHACSEIRAGHLSGDCHYKRE
Sbjct: 71  VVCSNHMNMQDEVNQVVIHELIHAYDDCRAANLDWANCVHHACSEIRAGHLSGDCHYKRE 130

Query: 61  LLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAVWDVCYNDTQPFDRAP 118
           LLRG+MK+RGHEQECVRRRVMKS++ANPYC EAAAKDAMEAVWDVCYNDT+PFDRAP
Sbjct: 131 LLRGYMKIRGHEQECVRRRVMKSMIANPYCSEAAAKDAMEAVWDVCYNDTKPFDRAP 187

[Close]

BLAST of Cucsa.011040.3 vs. NCBI nr
Match: gi|720068823|ref|XP_010277237.1| (PREDICTED: mitochondrial inner membrane protease ATP23 [Nelumbo nucifera])

HSP 1 Score: 241.9 bits (616), Expect = 5.7e-61
Identity = 107/117 (91.45%), Postives = 115/117 (98.29%), Query Frame = 1


Query: 1   MVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHACSEIRAGHLSGDCHYKRE 60
           +VCSNHMNIQDEVNQVVIHELIHA+DDCRAANLDWANC HHACSEIRAGHLSGDCHYKRE
Sbjct: 79  LVCSNHMNIQDEVNQVVIHELIHAYDDCRAANLDWANCAHHACSEIRAGHLSGDCHYKRE 138

Query: 61  LLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAVWDVCYNDTQPFDRAP 118
           LLRG+MK+RGHEQECV+RRVMKS+VANPYC EAAA+DAMEAVWDVCYNDT+PFDRAP
Sbjct: 139 LLRGYMKIRGHEQECVKRRVMKSVVANPYCSEAAARDAMEAVWDVCYNDTKPFDRAP 195

[Close]

BLAST of Cucsa.011040.3 vs. NCBI nr
Match: gi|645248855|ref|XP_008230483.1| (PREDICTED: mitochondrial inner membrane protease ATP23 [Prunus mume])

HSP 1 Score: 241.5 bits (615), Expect = 7.4e-61
Identity = 107/117 (91.45%), Postives = 114/117 (97.44%), Query Frame = 1


Query: 1   MVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCTHHACSEIRAGHLSGDCHYKRE 60
           +VC NHMNIQDEVNQVVIHELIHAFDDCRAANL+WANC HHACSEIRAGHLSGDCHYKRE
Sbjct: 79  LVCGNHMNIQDEVNQVVIHELIHAFDDCRAANLNWANCAHHACSEIRAGHLSGDCHYKRE 138

Query: 61  LLRGFMKLRGHEQECVRRRVMKSLVANPYCPEAAAKDAMEAVWDVCYNDTQPFDRAP 118
           LLRGF+K+RGHEQ+CVRRRVMKS++ANPYC EAAAKDAMEAVWDVCYNDTQPFDRAP
Sbjct: 139 LLRGFVKIRGHEQDCVRRRVMKSVIANPYCSEAAAKDAMEAVWDVCYNDTQPFDRAP 195

The following BLAST results are available for this feature:

BLAST of Cucsa.011040.3 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATP23_CRYNJ	1.3e-25	47.41	Mitochondrial inner membrane protease ATP23 OS=Cryptococcus neoformans var. neof...	[more]
ATP23_CRYNB	2.9e-25	46.55	Mitochondrial inner membrane protease ATP23 OS=Cryptococcus neoformans var. neof...	[more]
ATP23_XENLA	2.5e-24	47.46	Mitochondrial inner membrane protease ATP23 homolog OS=Xenopus laevis GN=atp23 P...	[more]
ATP23_YARLI	4.2e-24	45.30	Mitochondrial inner membrane protease ATP23 OS=Yarrowia lipolytica (strain CLIB ...	[more]
ATP23_DANRE	2.7e-23	47.46	Mitochondrial inner membrane protease ATP23 homolog OS=Danio rerio GN=atp23 PE=2...	[more]

BLAST of Cucsa.011040.3 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSC7_CUCSA	2.0e-65	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517840 PE=4 SV=1	[more]
B9SLT5_RICCO	2.3e-61	91.45	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0531760 PE=4 SV=1	[more]
M5WXF5_PRUPE	5.2e-61	91.45	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011801mg PE=4 SV=1	[more]
A0A068V9K1_COFCA	8.8e-61	91.45	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00019080001 PE=4 SV=1	[more]
W9R362_9ROSA	1.1e-60	89.74	Mitochondrial inner membrane protease ATP23 OS=Morus notabilis GN=L484_017764 PE...	[more]

BLAST of Cucsa.011040.3 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G03420.1	1.3e-58	83.62	Ku70-binding family protein	[more]

BLAST of Cucsa.011040.3 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778703521\|ref\|XP_011655379.1\|	2.9e-65	100.00	PREDICTED: mitochondrial inner membrane protease ATP23 [Cucumis sativus]	[more]
gi\|659117903\|ref\|XP_008458847.1\|	4.2e-64	97.44	PREDICTED: mitochondrial inner membrane protease ATP23 [Cucumis melo]	[more]
gi\|255572026\|ref\|XP_002526954.1\|	3.3e-61	91.45	PREDICTED: mitochondrial inner membrane protease ATP23 [Ricinus communis]	[more]
gi\|720068823\|ref\|XP_010277237.1\|	5.7e-61	91.45	PREDICTED: mitochondrial inner membrane protease ATP23 [Nelumbo nucifera]	[more]
gi\|645248855\|ref\|XP_008230483.1\|	7.4e-61	91.45	PREDICTED: mitochondrial inner membrane protease ATP23 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR019165	Peptidase_M76_ATP23

Vocabulary: **Molecular Function**
Term	Definition
GO:0004222	metalloendopeptidase activity

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004222	metalloendopeptidase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.011040	Cucsa.011040	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.011040.3	Cucsa.011040.3-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.011040.3.five_prime_UTR.1	Cucsa.011040.3.five_prime_UTR.1	five_prime_UTR
Cucsa.011040.3.five_prime_UTR.2	Cucsa.011040.3.five_prime_UTR.2	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.011040.3.CDS.1	Cucsa.011040.3.CDS.1	CDS
Cucsa.011040.3.CDS.2	Cucsa.011040.3.CDS.2	CDS
Cucsa.011040.3.CDS.3	Cucsa.011040.3.CDS.3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.011040.3.three_prime_UTR.1	Cucsa.011040.3.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019165	Peptidase M76, ATP23	PFAM	PF09768	Peptidase_M76	coord: 1..114 score: 4.5
None	No IPR available	PANTHER	PTHR21711	KUB3-PROV PROTEIN	coord: 1..117 score: 1.2