CsaV3_7G010120 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_7G010120
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	diphthamide biosynthesis protein 3-like
Location	chr7 : 5709468 .. 5711643 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAATTTGAAAATTCCAAAATTTAGATCGTATTTAAATATTCATTCTCACTCAAAACAAATTTGTTAATTATAATTATAAAAAAAAAGAATAAAGGGTAAATTGGACGCGGTTTTCCGGAACAATCCGGAGCCCCCAAAACAAAAGAAACCCAAATCCCTCCATCCTCTTCCTTACCTTCCCAACTCGGCGGTTTCTGACTCGCCTCCGCAACTATGTCCTACGACGACGTGGAGATTGAAGACATGGAGTGGAACGACGAACTTCAGGCCTTCACCTACCCTTGCCCCTGCGGCGACTTGTTCCAGATCACCAAGGAGGATCTTAAGCTCGGTGAAGAGATTGCTCGTTGCCCTAGCTGCTCTCTTTACATCACCGTCATCTACAACATGGAAGATTTTCTCGATCACTCCAATCAGAAGAATAACAAAGGACTTGAGCCCTCTAAACAACACCCTATCGTAGTCGCTTAATACATATTTCAGGTTATTAACCCGATTCAACCTTCGGATATAATGTTTTTTTCCCTTCTTATATGCTTTCGGTGGTTCCTTCCTCTTTATAGCTTTCCTTCTTCGTACCTACATATTCTGATATGCCTATTTTCTAATCGCTGTGAGGATGGAAGGACAGTCATGTCTGAATCTGGAATTTATTTGAAGTTTTGGAATATGTTTCTTCCCCTCCTGCCCTCAGGAGGATAGTTATTGTTATATAGCTTAGTTTCACAGACGTTATCAGTATTGAACTCTGTGTAGGCCTTTAGCGTGATAAAATATCCAATTGGTTTGTTTGTCTCCCCTTCCCTGTGATAATTGTTTTAGAGATAGTTTGTGAAACTTAATACTCTTTCTCAAAGCATTATGCTATTGTGTTTGTTCGTGTTGTTTTCATCAAGTCTCAAGGATTTACCATGTAAGACATATTTTTGGTCATTGTTGGTACACCATAGATTTCTGACTAGTTGGTAGAAAAATGGAGAAAGTGACCCTTATTAAAGCTATACTGCTGCTGCACACAATAACATATATCTTATTTCAGAAGCTCTGGTGTTTTAGTTTGTGACCAATTTTGAATGGAGTAAATTCATTTTGGGATTGAGAAAAGAGAATGTTTTGCTTTACCACATACATCCCTTAGGAGGAGGATATCAATTAGTTTGTTATATTATTGTATACATGACCAGTTCATTACTCTGAGCTTTAGTGCGAAACTCTTTATTATCCTGTTCTAGATTCACTAGTTAATGCTTATGCTGAAGTAGTTAACTTTTCTTTTCTGGGTTGTTTCATATTGCCCTTCTTTTTACTTATCAAGTGGTGCAATTATGAAAATACATAAATCAAATGTTTAGAGATTATTTCGTTGAAAATGTTTCCTTTTCTAGAATAATACACAGTTGAGCTTGATTATGTTTGTCTCAGGGTTTACCATCTAAGGACGTCTTTTTGGTCATTGTTCGTATACTGTACTTCTATACTTATTTTCTAACCATGAATATATATTGTATTTATATCTGTCTTTTTTCAATGAAGTGAACTTGTCTGATTTTGAGATAGAAATTGGAGGTAGTAGTAGCTCTGTTTGAATCCAGACCACACATTAGAATGAATATAATCCTCTTGAGTTCTTGGTGCTTAGGTTGTGTGATATGTGAATCAATTCAAGTTTCTGTTAAACTTTGTAGCAGAAGTGTAATGTAGCACTTAGATACTCTAAACTCTATCAATACATAACTGGAATGGGTTTCTCTTCGTTACCTTTATGTAGATGTTACTTTTTGCAGAACTGTCGAATTCAAATCATGGCTTTGCCGCAGCAGCTGAGATGAAATTTTGTTAGCCATTGCCAATTCTGAAGATGTTCTTTGGCATTAAAGTTTCTTCCTTTGCTTCTCATTACTCTTTTACAGAATTGGTCTAGGAAATAGAGGAAGGTAGAGTTGCGTCTGGAAAAATGTATTAAGGTACTATTTTTGTTCCTTCAAAAAGTAATTTATAGATACTTTATCTTTTCACAATCGAATGTAATGATTGGTGAATTCTTTTGTCGAAGTAAATCTGATAATCAAGAGAAACTTTAGACATAAAATGGACGAAAGCTCTAATAATCTAAAATGGTTTGAATCTTTTATTTGGTTGTTGAACTTGTAAGTTTATTAAATTTTGATGTCTTAG

mRNA sequence

ATGTCCTACGACGACGTGGAGATTGAAGACATGGAGTGGAACGACGAACTTCAGGCCTTCACCTACCCTTGCCCCTGCGGCGACTTGTTCCAGATCACCAAGGAGGATCTTAAGCTCGGTGAAGAGATTGCTCGTTGCCCTAGCTGCTCTCTTTACATCACCGTCATCTACAACATGGAAGATTTTCTCGATCACTCCAATCAGAAGAATAACAAAGGACTTGAGCCCTCTAAACAACACCCTATCGTAGTCGCTTAA

Coding sequence (CDS)

ATGTCCTACGACGACGTGGAGATTGAAGACATGGAGTGGAACGACGAACTTCAGGCCTTCACCTACCCTTGCCCCTGCGGCGACTTGTTCCAGATCACCAAGGAGGATCTTAAGCTCGGTGAAGAGATTGCTCGTTGCCCTAGCTGCTCTCTTTACATCACCGTCATCTACAACATGGAAGATTTTCTCGATCACTCCAATCAGAAGAATAACAAAGGACTTGAGCCCTCTAAACAACACCCTATCGTAGTCGCTTAA

Protein sequence

MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNMEDFLDHSNQKNNKGLEPSKQHPIVVA

Homology

[Close]

BLAST of CsaV3_7G010120 vs. NCBI nr
Match: XP_004137002.1 (PREDICTED: diphthamide biosynthesis protein 3-like [Cucumis sativus] >KGN43974.1 hypothetical protein Csa_7G075060 [Cucumis sativus])

HSP 1 Score: 188.0 bits (476), Expect = 1.4e-44
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 1  MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLDHSNQKNNKGLEPSKQHPIVVA 86
          DFLDHSNQKNNKGLEPSKQHPIVVA
Sbjct: 61 DFLDHSNQKNNKGLEPSKQHPIVVA 85

[Close]

BLAST of CsaV3_7G010120 vs. NCBI nr
Match: XP_008454889.1 (PREDICTED: diphthamide biosynthesis protein 3-like [Cucumis melo] >XP_008454890.1 PREDICTED: diphthamide biosynthesis protein 3-like [Cucumis melo])

HSP 1 Score: 181.8 bits (460), Expect = 9.9e-43
Identity = 82/85 (96.47%), Postives = 84/85 (98.82%), Query Frame = 0


Query: 1  MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDM+WN+ELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMDWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLDHSNQKNNKGLEPSKQHPIVVA 86
          DFLD SNQKNNKGLEPSKQHPIVVA
Sbjct: 61 DFLDDSNQKNNKGLEPSKQHPIVVA 85

[Close]

BLAST of CsaV3_7G010120 vs. NCBI nr
Match: XP_022972367.1 (diphthamide biosynthesis protein 3-like [Cucurbita maxima])

HSP 1 Score: 172.2 bits (435), Expect = 7.8e-40
Identity = 78/85 (91.76%), Postives = 81/85 (95.29%), Query Frame = 0


Query: 1  MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWN+ELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLDHSNQKNNKGLEPSKQHPIVVA 86
          DFL  S+ KNNKGL+PSKQ PIVVA
Sbjct: 61 DFLGDSDHKNNKGLQPSKQQPIVVA 85

[Close]

BLAST of CsaV3_7G010120 vs. NCBI nr
Match: XP_022136247.1 (diphthamide biosynthesis protein 3-like [Momordica charantia])

HSP 1 Score: 170.2 bits (430), Expect = 3.0e-39
Identity = 76/85 (89.41%), Postives = 81/85 (95.29%), Query Frame = 0


Query: 1  MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWN ELQA+TYPCPCGDLFQITKEDL+LGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNQELQAYTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLDHSNQKNNKGLEPSKQHPIVVA 86
          DFL  S+QKNNKG++PSKQ PIVVA
Sbjct: 61 DFLGDSDQKNNKGIQPSKQQPIVVA 85

[Close]

BLAST of CsaV3_7G010120 vs. NCBI nr
Match: XP_022931585.1 (diphthamide biosynthesis protein 3-like [Cucurbita moschata])

HSP 1 Score: 169.5 bits (428), Expect = 5.1e-39
Identity = 78/85 (91.76%), Postives = 79/85 (92.94%), Query Frame = 0


Query: 1  MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWN+ELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLDHSNQKNNKGLEPSKQHPIVVA 86
          DFL  S QKNN GLEPSKQ P VVA
Sbjct: 61 DFLGDSVQKNNTGLEPSKQRPAVVA 85

[Close]

BLAST of CsaV3_7G010120 vs. TAIR10
Match: AT2G15910.1 (CSL zinc finger domain-containing protein)

HSP 1 Score: 142.1 bits (357), Expect = 1.6e-34
Identity = 64/82 (78.05%), Postives = 72/82 (87.80%), Query Frame = 0


Query: 1  MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWN+E+QA+TYPCPCGDLFQITKEDL+LGEEIA CPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNEEIQAYTYPCPCGDLFQITKEDLRLGEEIANCPSCSLYITVIYNME 60

Query: 61 DFLDHSNQKNNKGLEPSKQHPI 83
          DF  +  +KNN   EP  +HP+
Sbjct: 61 DF-QNDTKKNN---EPKTRHPV 78

[Close]

BLAST of CsaV3_7G010120 vs. Swiss-Prot
Match: sp|Q6CMG4|DPH3_KLULA (Diphthamide biosynthesis protein 3 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=DPH3 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 5.7e-18
Identity = 41/83 (49.40%), Postives = 59/83 (71.08%), Query Frame = 0


Query: 2  SYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNMED 61
          +YD+VEIEDM ++ + Q FTYPCPCGD FQI+ +D+  GE+IA CPSCSL I V+++ ED
Sbjct: 3  TYDEVEIEDMTFDPDTQIFTYPCPCGDRFQISIDDMYDGEDIAVCPSCSLMIQVVFDKED 62

Query: 62 FLDHSNQKNNKGLEPSKQHPIVV 85
           +++  + N   LEP  +  + V
Sbjct: 63 LVEYYVEAN---LEPPGKIAVAV 82

[Close]

BLAST of CsaV3_7G010120 vs. Swiss-Prot
Match: sp|Q9UT33|DPH3_SCHPO (Diphthamide biosynthesis protein 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dph3 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.2e-17
Identity = 36/83 (43.37%), Postives = 57/83 (68.67%), Query Frame = 0


Query: 3  YDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNMEDF 62
          YD++E+ED  ++     +T+PCPCGD F+I+ EDL+LGE++ARCPSCSL + VIY+ ++F
Sbjct: 4  YDEIELEDFTFDAGTNLYTFPCPCGDRFEISLEDLQLGEDVARCPSCSLIVRVIYDEDEF 63

Query: 63 LDHSNQKNNKGLEPSKQHPIVVA 86
          ++  N  +          PI++A
Sbjct: 64 MEVDNDASTA--------PIIIA 78

[Close]

BLAST of CsaV3_7G010120 vs. Swiss-Prot
Match: sp|Q74Z32|DPH3_ASHGO (Diphthamide biosynthesis protein 3 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DPH3 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 2.8e-17
Identity = 39/74 (52.70%), Postives = 54/74 (72.97%), Query Frame = 0


Query: 3  YDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNMEDF 62
          YD+VEIEDM ++ + Q FTYPCPCGD FQI+ +D+  GE+IA CPSCSL I V+Y + D 
Sbjct: 4  YDEVEIEDMTFDPDTQLFTYPCPCGDRFQISIDDMCDGEDIAVCPSCSLMIKVVYELHDL 63

Query: 63 LDHSNQKNNKGLEP 77
           ++ ++    G+EP
Sbjct: 64 QEYYDE---AGVEP 74

[Close]

BLAST of CsaV3_7G010120 vs. Swiss-Prot
Match: sp|Q4P8G2|DPH3_USTMA (Diphthamide biosynthesis protein 3 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=DPH3 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 3.7e-17
Identity = 35/62 (56.45%), Postives = 48/62 (77.42%), Query Frame = 0


Query: 3  YDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNMEDF 62
          YD++E+EDM ++DE   F YPCPCGD F+IT++ LK  E++ARCPSCSL I V+++  DF
Sbjct: 6  YDEIELEDMSYDDEKDVFHYPCPCGDRFEITRQQLKDAEDVARCPSCSLIIRVVFDPIDF 65

Query: 63 LD 65
           D
Sbjct: 66 ED 67

[Close]

BLAST of CsaV3_7G010120 vs. Swiss-Prot
Match: sp|Q21102|DPH3_CAEEL (DPH3 homolog OS=Caenorhabditis elegans OX=6239 GN=K01H12.1 PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 4.9e-17
Identity = 35/61 (57.38%), Postives = 50/61 (81.97%), Query Frame = 0


Query: 3  YDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNMEDF 62
          +D+VEIED E+++E   + YPCPCGD F+I +E L++GE++A+CPSCSL I VIY+ EDF
Sbjct: 5  HDEVEIEDFEFDEEKDVYHYPCPCGDRFEIPREMLEMGEDVAQCPSCSLLIRVIYDPEDF 64

Query: 63 L 64
          +
Sbjct: 65 V 65

[Close]

BLAST of CsaV3_7G010120 vs. TrEMBL
Match: tr|A0A0A0K4W9|A0A0A0K4W9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G075060 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 9.1e-45
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 1  MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLDHSNQKNNKGLEPSKQHPIVVA 86
          DFLDHSNQKNNKGLEPSKQHPIVVA
Sbjct: 61 DFLDHSNQKNNKGLEPSKQHPIVVA 85

[Close]

BLAST of CsaV3_7G010120 vs. TrEMBL
Match: tr|A0A1S3BZL5|A0A1S3BZL5_CUCME (diphthamide biosynthesis protein 3-like OS=Cucumis melo OX=3656 GN=LOC103495198 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 6.5e-43
Identity = 82/85 (96.47%), Postives = 84/85 (98.82%), Query Frame = 0


Query: 1  MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDM+WN+ELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMDWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLDHSNQKNNKGLEPSKQHPIVVA 86
          DFLD SNQKNNKGLEPSKQHPIVVA
Sbjct: 61 DFLDDSNQKNNKGLEPSKQHPIVVA 85

[Close]

BLAST of CsaV3_7G010120 vs. TrEMBL
Match: tr|K7LPC5|K7LPC5_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100500529 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.2e-36
Identity = 73/86 (84.88%), Postives = 80/86 (93.02%), Query Frame = 0


Query: 1  MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWN+ELQA+TYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYN+E
Sbjct: 1  MSYDDVEIEDMEWNEELQAYTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNLE 60

Query: 61 DFLDHSNQ-KNNKGLEPSKQHPIVVA 86
          DFL  S+Q + NKGL+PSKQ P+ VA
Sbjct: 61 DFLSDSDQNRPNKGLQPSKQQPLTVA 86

[Close]

BLAST of CsaV3_7G010120 vs. TrEMBL
Match: tr|A0A0B2PEW4|A0A0B2PEW4_GLYSO (DPH3 like OS=Glycine soja OX=3848 GN=glysoja_031610 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.2e-36
Identity = 73/86 (84.88%), Postives = 80/86 (93.02%), Query Frame = 0


Query: 1  MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWN+ELQA+TYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYN+E
Sbjct: 1  MSYDDVEIEDMEWNEELQAYTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNLE 60

Query: 61 DFLDHSNQ-KNNKGLEPSKQHPIVVA 86
          DFL  S+Q + NKGL+PSKQ P+ VA
Sbjct: 61 DFLSDSDQNRPNKGLQPSKQQPLTVA 86

[Close]

BLAST of CsaV3_7G010120 vs. TrEMBL
Match: tr|A0A200QTM0|A0A200QTM0_9MAGN (Zinc finger protein OS=Macleaya cordata OX=56857 GN=BVC80_1769g68 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.0e-36
Identity = 70/85 (82.35%), Postives = 78/85 (91.76%), Query Frame = 0


Query: 1  MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWN+ELQAFTYPCPCGDLFQITKE+LK+GEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEELKIGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLDHSNQKNNKGLEPSKQHPIVVA 86
          DF+  S++ + K LEPSKQ P+ VA
Sbjct: 61 DFMGDSDRNSKKNLEPSKQQPVAVA 85

The following BLAST results are available for this feature:

BLAST of CsaV3_7G010120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137002.1	1.4e-44	100.00	PREDICTED: diphthamide biosynthesis protein 3-like [Cucumis sativus] >KGN43974.1...	[more]
XP_008454889.1	9.9e-43	96.47	PREDICTED: diphthamide biosynthesis protein 3-like [Cucumis melo] >XP_008454890....	[more]
XP_022972367.1	7.8e-40	91.76	diphthamide biosynthesis protein 3-like [Cucurbita maxima]	[more]
XP_022136247.1	3.0e-39	89.41	diphthamide biosynthesis protein 3-like [Momordica charantia]	[more]
XP_022931585.1	5.1e-39	91.76	diphthamide biosynthesis protein 3-like [Cucurbita moschata]	[more]

BLAST of CsaV3_7G010120 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G15910.1	1.6e-34	78.05	CSL zinc finger domain-containing protein	[more]

BLAST of CsaV3_7G010120 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6CMG4\|DPH3_KLULA	5.7e-18	49.40	Diphthamide biosynthesis protein 3 OS=Kluyveromyces lactis (strain ATCC 8585 / C...	[more]
sp\|Q9UT33\|DPH3_SCHPO	2.2e-17	43.37	Diphthamide biosynthesis protein 3 OS=Schizosaccharomyces pombe (strain 972 / AT...	[more]
sp\|Q74Z32\|DPH3_ASHGO	2.8e-17	52.70	Diphthamide biosynthesis protein 3 OS=Ashbya gossypii (strain ATCC 10895 / CBS 1...	[more]
sp\|Q4P8G2\|DPH3_USTMA	3.7e-17	56.45	Diphthamide biosynthesis protein 3 OS=Ustilago maydis (strain 521 / FGSC 9021) O...	[more]
sp\|Q21102\|DPH3_CAEEL	4.9e-17	57.38	DPH3 homolog OS=Caenorhabditis elegans OX=6239 GN=K01H12.1 PE=3 SV=1	[more]

BLAST of CsaV3_7G010120 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K4W9\|A0A0A0K4W9_CUCSA	9.1e-45	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G075060 PE=4 SV=1	[more]
tr\|A0A1S3BZL5\|A0A1S3BZL5_CUCME	6.5e-43	96.47	diphthamide biosynthesis protein 3-like OS=Cucumis melo OX=3656 GN=LOC103495198 ...	[more]
tr\|K7LPC5\|K7LPC5_SOYBN	1.2e-36	84.88	Uncharacterized protein OS=Glycine max OX=3847 GN=100500529 PE=4 SV=1	[more]
tr\|A0A0B2PEW4\|A0A0B2PEW4_GLYSO	1.2e-36	84.88	DPH3 like OS=Glycine soja OX=3848 GN=glysoja_031610 PE=4 SV=1	[more]
tr\|A0A200QTM0\|A0A200QTM0_9MAGN	2.0e-36	82.35	Zinc finger protein OS=Macleaya cordata OX=56857 GN=BVC80_1769g68 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007872	Znf_DHP
IPR036671	Znf_DHP_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G010120.1	CsaV3_7G010120.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036671	DPH Zinc finger superfamily	GENE3D	G3DSA:3.10.660.10		coord: 1..84 e-value: 4.2E-32 score: 111.8
IPR036671	DPH Zinc finger superfamily	SUPERFAMILY	SSF144217	CSL zinc finger	coord: 2..72
IPR007872	Zinc finger, DPH-type	PFAM	PF05207	zf-CSL	coord: 4..58 e-value: 1.2E-21 score: 76.1
IPR007872	Zinc finger, DPH-type	PROSITE	PS51074	ZF_DPH	coord: 2..58 score: 23.069
None	No IPR available	PANTHER	PTHR21454:SF2	DPH3 HOMOLOG-RELATED	coord: 1..73
None	No IPR available	PANTHER	PTHR21454	FAMILY NOT NAMED	coord: 1..73

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_7G010120	CSPI07G08020	Wild cucumber (PI 183967)	cpicucB415
CsaV3_7G010120	Cucsa.220230	Cucumber (Gy14) v1	cgycucB342
CsaV3_7G010120	CmaCh11G017790	Cucurbita maxima (Rimu)	cmacucB0171
CsaV3_7G010120	CmaCh19G006370	Cucurbita maxima (Rimu)	cmacucB0639
CsaV3_7G010120	CmoCh11G013300	Cucurbita moschata (Rifu)	cmocucB0160
CsaV3_7G010120	CsGy7G007590	Cucumber (Gy14) v2	cgybcucB348
CsaV3_7G010120	Cla015974	Watermelon (97103) v1	cucwmB635
CsaV3_7G010120	MELO3C018416	Melon (DHL92) v3.5.1	cucmeB548
CsaV3_7G010120	ClCG02G005510	Watermelon (Charleston Gray)	cucwcgB572
CsaV3_7G010120	Lsi11G010470	Bottle gourd (USVL1VR-Ls)	cuclsiB530
CsaV3_7G010120	MELO3C018416.2	Melon (DHL92) v3.6.1	cucmedB536
CsaV3_7G010120	Cla97C02G032500	Watermelon (97103) v2	cucwmbB550
CsaV3_7G010120	Bhi05G001032	Wax gourd	cucwgoB688

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_7G010120	Silver-seed gourd	carcucB0237
CsaV3_7G010120	Cucurbita moschata (Rifu)	cmocucB0623
CsaV3_7G010120	Cucurbita pepo (Zucchini)	cpecucB0323
CsaV3_7G010120	Cucurbita pepo (Zucchini)	cpecucB0868