CSPI07G08020 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI07G08020
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Diphthamide biosynthesis protein 3
Location	Chr7 : 5691990 .. 5694053 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAGAATAAAGGGTAAATTGGACGCGGTTTTCCGGAACAATCCGGAGCCCCCAAAACAAAAGAAACCCAAATCCCTCCATCCTCTTCCTTACCTTCCCAACTCGGCGGTTTCTGACTCGCCTCCGCAACTATGTCCTACGACGACGTGGAGATTGAAGACATGGAGTGGAACGACGAACTTCAGGCCTTCACCTACCCTTGCCCCTGCGGCGACTTGTTCCAGATCACCAAGGAGGATCTTAAGCTCGGTGAAGAGATTGCTCGTTGCCCTAGCTGCTCTCTTTACATCACTGTCATCTACAACATGGAAGATTTTCTCGATCACTCCAATCAGAAGAATAACAAAGGACTTGAGCCCTCCAAACAACACCCTATCGTAGTCGCTTAATAAATATTTCAGGTTATTAACCCGATTCAACCTTCGGATATAATGTTTTTTTCCCTTCTTATATGCTTTCGGTGGTTCCTTCCTCTTTATAGCTTTCCTTGTTCGTACCTACATATTCTGATATGCCTATTTTCTAATCTCTGTGAGGATGGGAGGACAGTCATGTCTGAATCTGGAATTTATTTGAAGTTTTGGAATATGTTTCTTCCCCTCCTGCCCTCAGGAGAATAGTTATTGTTATATAGCTTAGTTTCACAGACGTTATCAGTTTTGAACTCTGTGTAGGCCTTTAGCGTGATAAAATATCCAATTGGTTTGTTTGTCTCCCCTTCCCTGTGATAATTGTTTTAGTGATAGTTTGTGAAACTTAATACTCTTTCTCAAAGCATTATGCTATTGTGTTTGTTCGTGTTGTTTTCATCAAGTCTCAAGGATTTACCATGTAAGACATATTTTTGGTCATTGTTGGTACACCATAGATTTCTGACTAGTTGGTAGAAAAATGGAGAAAGTGACCCTTATTAAAGCTATACTGCTGCTGCACACGATAACATATATCTTATTTCAGAAGCTCTGGTGTTTTAGTTTGTGACCAATTTTGAATGGAGTAAATTCATTTTGGGATTGAGAAAAGAGAATGTTTTGCTTTACCACATACATCCCTTAGGAGGAGGATATCAATTAGTTTGTTATATTATTGTATACATGACCAGTTCATTACTCTGAGCTTTAGTGCGAAACTCTTTATTATCCTGTTCTAGATTCACTAGTTAATGCTTATGCTGAAGTAGTTAACTTTTCTTTTCTGGGTTGTTTCATATTGCCCTTCTTTTTACTTATCAAGTGGTGCAATTATGAAAATACATAAATCAAATGTTTAGAGATTATTTCGTTGAAAATGTTTCCTTTTCTAGAATAATGCACAGTTGAGCTTGATTATGTTTGTCTCAGGGTTTACCATCTAAGGACGTCTTTTTGGTAATTGTTCGTATACTGTACTTCTATACTTATTTTCTAACCAGGAATATTTATTGTATTTATATCTGTCTATTTTCAATGAAGTGAACTTGTCTGATTTTGAGATAGAAATTGGAGGTAGTAGCAGCTCTGTTTGAATCCAGACCACACATTAGAATGAATATAATCCTATTGAGTTCTTGGTGTTTAGTTTGTGTGATATGTGAATCAATTCAAGTTTCTGTTAAACTTTGTAGCAGAAGTGTAATGTAGCACTTAGATACTCTAAACTCTATCAATACATAACTGGAATGGGTTTCTCTTCGTTACCTTTATGTAGATGTTACTTTTTGCAGAACTGTCGAATTCAAATCATGGCTTTGCCGCAGCAGCTGAGATGAAATTTTGTTAGCCATTGCCAATTCTGAAGATGTTCTTTGGCATTAAAGTTTCTTCCTTTGCTTCTCATTACTCTTTTACAGAATTGGTCTAGGAAATAGAGGAAGGTAGAGTTGCGTCTGGAAAAATGTATTAAGGTACTATTTTTGTTCCTTCAAAAAGTAATTTATAAATACTTTATCTTTTCACAATCGAATGTAATGATTGGTGAATTCTTTTGTCGAAGTAAATCTGATAATCAAGAGAAACTTTAGACATAAAATGGACGAAAGCTCTAATAATCTAAAATGGTTTGAATCTTTTATTTGGTTGTTGAA

mRNA sequence

ATGTCCTACGACGACGTGGAGATTGAAGACATGGAGTGGAACGACGAACTTCAGGCCTTCACCTACCCTTGCCCCTGCGGCGACTTGTTCCAGATCACCAAGGAGGATCTTAAGCTCGGTGAAGAGATTGCTCGTTGCCCTAGCTGCTCTCTTTACATCACTGTCATCTACAACATGGAAGATTTTCTCGATCACTCCAATCAGAAGAATAACAAAGGACTTGAGCCCTCCAAACAACACCCTATCGTAGTCGCTTAA

Coding sequence (CDS)

ATGTCCTACGACGACGTGGAGATTGAAGACATGGAGTGGAACGACGAACTTCAGGCCTTCACCTACCCTTGCCCCTGCGGCGACTTGTTCCAGATCACCAAGGAGGATCTTAAGCTCGGTGAAGAGATTGCTCGTTGCCCTAGCTGCTCTCTTTACATCACTGTCATCTACAACATGGAAGATTTTCTCGATCACTCCAATCAGAAGAATAACAAAGGACTTGAGCCCTCCAAACAACACCCTATCGTAGTCGCTTAA

Homology

[Close]

BLAST of CSPI07G08020 vs. Swiss-Prot
Match: DPH3_KLULA (Diphthamide biosynthesis protein 3 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=DPH3 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 5.6e-18
Identity = 41/83 (49.40%), Postives = 59/83 (71.08%), Query Frame = 1


Query: 2  SYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNMED 61
          +YD+VEIEDM ++ + Q FTYPCPCGD FQI+ +D+  GE+IA CPSCSL I V+++ ED
Sbjct: 3  TYDEVEIEDMTFDPDTQIFTYPCPCGDRFQISIDDMYDGEDIAVCPSCSLMIQVVFDKED 62

Query: 62 FLDHSNQKNNKGLEPSKQHPIVV 85
           +++  + N   LEP  +  + V
Sbjct: 63 LVEYYVEAN---LEPPGKIAVAV 82

[Close]

BLAST of CSPI07G08020 vs. Swiss-Prot
Match: DPH3_SCHPO (Diphthamide biosynthesis protein 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dph3 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.1e-17
Identity = 36/83 (43.37%), Postives = 57/83 (68.67%), Query Frame = 1


Query: 3  YDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNMEDF 62
          YD++E+ED  ++     +T+PCPCGD F+I+ EDL+LGE++ARCPSCSL + VIY+ ++F
Sbjct: 4  YDEIELEDFTFDAGTNLYTFPCPCGDRFEISLEDLQLGEDVARCPSCSLIVRVIYDEDEF 63

Query: 63 LDHSNQKNNKGLEPSKQHPIVVA 86
          ++  N  +          PI++A
Sbjct: 64 MEVDNDASTA--------PIIIA 78

[Close]

BLAST of CSPI07G08020 vs. Swiss-Prot
Match: DPH3_ASHGO (Diphthamide biosynthesis protein 3 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DPH3 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 2.8e-17
Identity = 39/74 (52.70%), Postives = 54/74 (72.97%), Query Frame = 1


Query: 3  YDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNMEDF 62
          YD+VEIEDM ++ + Q FTYPCPCGD FQI+ +D+  GE+IA CPSCSL I V+Y + D 
Sbjct: 4  YDEVEIEDMTFDPDTQLFTYPCPCGDRFQISIDDMCDGEDIAVCPSCSLMIKVVYELHDL 63

Query: 63 LDHSNQKNNKGLEP 77
           ++ ++    G+EP
Sbjct: 64 QEYYDE---AGVEP 74

[Close]

BLAST of CSPI07G08020 vs. Swiss-Prot
Match: DPH3_USTMA (Diphthamide biosynthesis protein 3 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=DPH3 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 3.7e-17
Identity = 35/62 (56.45%), Postives = 48/62 (77.42%), Query Frame = 1


Query: 3  YDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNMEDF 62
          YD++E+EDM ++DE   F YPCPCGD F+IT++ LK  E++ARCPSCSL I V+++  DF
Sbjct: 6  YDEIELEDMSYDDEKDVFHYPCPCGDRFEITRQQLKDAEDVARCPSCSLIIRVVFDPIDF 65

Query: 63 LD 65
           D
Sbjct: 66 ED 67

[Close]

BLAST of CSPI07G08020 vs. Swiss-Prot
Match: DPH3_CAEEL (DPH3 homolog OS=Caenorhabditis elegans GN=K01H12.1 PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 4.8e-17
Identity = 35/61 (57.38%), Postives = 50/61 (81.97%), Query Frame = 1


Query: 3  YDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNMEDF 62
          +D+VEIED E+++E   + YPCPCGD F+I +E L++GE++A+CPSCSL I VIY+ EDF
Sbjct: 5  HDEVEIEDFEFDEEKDVYHYPCPCGDRFEIPREMLEMGEDVAQCPSCSLLIRVIYDPEDF 64

Query: 63 L 64
          +
Sbjct: 65 V 65

[Close]

BLAST of CSPI07G08020 vs. TrEMBL
Match: A0A0A0K4W9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G075060 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 4.9e-45
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 1


Query: 1  MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLDHSNQKNNKGLEPSKQHPIVVA 86
          DFLDHSNQKNNKGLEPSKQHPIVVA
Sbjct: 61 DFLDHSNQKNNKGLEPSKQHPIVVA 85

[Close]

BLAST of CSPI07G08020 vs. TrEMBL
Match: A0A0B2PEW4_GLYSO (DPH3 like OS=Glycine soja GN=glysoja_031610 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 6.5e-37
Identity = 73/86 (84.88%), Postives = 80/86 (93.02%), Query Frame = 1


Query: 1  MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWN+ELQA+TYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYN+E
Sbjct: 1  MSYDDVEIEDMEWNEELQAYTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNLE 60

Query: 61 DFLDHSNQ-KNNKGLEPSKQHPIVVA 86
          DFL  S+Q + NKGL+PSKQ P+ VA
Sbjct: 61 DFLSDSDQNRPNKGLQPSKQQPLTVA 86

[Close]

BLAST of CSPI07G08020 vs. TrEMBL
Match: K7LPC5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G123600 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 6.5e-37
Identity = 73/86 (84.88%), Postives = 80/86 (93.02%), Query Frame = 1


Query: 1  MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWN+ELQA+TYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYN+E
Sbjct: 1  MSYDDVEIEDMEWNEELQAYTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNLE 60

Query: 61 DFLDHSNQ-KNNKGLEPSKQHPIVVA 86
          DFL  S+Q + NKGL+PSKQ P+ VA
Sbjct: 61 DFLSDSDQNRPNKGLQPSKQQPLTVA 86

[Close]

BLAST of CSPI07G08020 vs. TrEMBL
Match: I3SPP6_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 2.5e-36
Identity = 72/86 (83.72%), Postives = 79/86 (91.86%), Query Frame = 1


Query: 1  MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWN+ELQA+TYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNEELQAYTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLDHSNQKN-NKGLEPSKQHPIVVA 86
          DFL  S+Q + NKGL+PSKQ  + +A
Sbjct: 61 DFLGDSDQNHRNKGLQPSKQQTVTIA 86

[Close]

BLAST of CSPI07G08020 vs. TrEMBL
Match: A0A0B2R0A8_GLYSO (DPH3 like OS=Glycine soja GN=glysoja_010249 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 3.2e-36
Identity = 72/86 (83.72%), Postives = 79/86 (91.86%), Query Frame = 1


Query: 1  MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWN+ELQA+TYPCPCGDLFQITKEDL LGEEIARCPSCSLYITVIYN+E
Sbjct: 1  MSYDDVEIEDMEWNEELQAYTYPCPCGDLFQITKEDLMLGEEIARCPSCSLYITVIYNLE 60

Query: 61 DFLDHSNQ-KNNKGLEPSKQHPIVVA 86
          DFL  S+Q + NKGL+PSKQ P+ VA
Sbjct: 61 DFLADSDQNRRNKGLQPSKQQPLTVA 86

[Close]

BLAST of CSPI07G08020 vs. TAIR10
Match: AT2G15910.1 (AT2G15910.1 CSL zinc finger domain-containing protein)

HSP 1 Score: 142.1 bits (357), Expect = 1.6e-34
Identity = 64/82 (78.05%), Postives = 72/82 (87.80%), Query Frame = 1


Query: 1  MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWN+E+QA+TYPCPCGDLFQITKEDL+LGEEIA CPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNEEIQAYTYPCPCGDLFQITKEDLRLGEEIANCPSCSLYITVIYNME 60

Query: 61 DFLDHSNQKNNKGLEPSKQHPI 83
          DF  +  +KNN   EP  +HP+
Sbjct: 61 DF-QNDTKKNN---EPKTRHPV 78

[Close]

BLAST of CSPI07G08020 vs. NCBI nr
Match: gi|449438452|ref|XP_004137002.1| (PREDICTED: diphthamide biosynthesis protein 3-like [Cucumis sativus])

HSP 1 Score: 188.0 bits (476), Expect = 7.1e-45
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 1


Query: 1  MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLDHSNQKNNKGLEPSKQHPIVVA 86
          DFLDHSNQKNNKGLEPSKQHPIVVA
Sbjct: 61 DFLDHSNQKNNKGLEPSKQHPIVVA 85

[Close]

BLAST of CSPI07G08020 vs. NCBI nr
Match: gi|659109803|ref|XP_008454889.1| (PREDICTED: diphthamide biosynthesis protein 3-like [Cucumis melo])

HSP 1 Score: 181.8 bits (460), Expect = 5.1e-43
Identity = 82/85 (96.47%), Postives = 84/85 (98.82%), Query Frame = 1


Query: 1  MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDM+WN+ELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMDWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLDHSNQKNNKGLEPSKQHPIVVA 86
          DFLD SNQKNNKGLEPSKQHPIVVA
Sbjct: 61 DFLDDSNQKNNKGLEPSKQHPIVVA 85

[Close]

BLAST of CSPI07G08020 vs. NCBI nr
Match: gi|571488375|ref|XP_003537913.2| (PREDICTED: diphthamide biosynthesis protein 3 [Glycine max])

HSP 1 Score: 161.0 bits (406), Expect = 9.3e-37
Identity = 73/86 (84.88%), Postives = 80/86 (93.02%), Query Frame = 1


Query: 1  MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWN+ELQA+TYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYN+E
Sbjct: 1  MSYDDVEIEDMEWNEELQAYTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNLE 60

Query: 61 DFLDHSNQ-KNNKGLEPSKQHPIVVA 86
          DFL  S+Q + NKGL+PSKQ P+ VA
Sbjct: 61 DFLSDSDQNRPNKGLQPSKQQPLTVA 86

[Close]

BLAST of CSPI07G08020 vs. NCBI nr
Match: gi|1009168474|ref|XP_015902678.1| (PREDICTED: diphthamide biosynthesis protein 3-like [Ziziphus jujuba])

HSP 1 Score: 160.2 bits (404), Expect = 1.6e-36
Identity = 71/85 (83.53%), Postives = 77/85 (90.59%), Query Frame = 1


Query: 1  MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWN+ELQA+TYPCPCGDLFQITK+DLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNEELQAYTYPCPCGDLFQITKDDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLDHSNQKNNKGLEPSKQHPIVVA 86
          DF    ++K NKGLEPSKQ  + VA
Sbjct: 61 DFSGEPDRKTNKGLEPSKQQTVTVA 85

[Close]

BLAST of CSPI07G08020 vs. NCBI nr
Match: gi|388508344|gb|AFK42238.1| (unknown [Lotus japonicus])

HSP 1 Score: 159.1 bits (401), Expect = 3.5e-36
Identity = 72/86 (83.72%), Postives = 79/86 (91.86%), Query Frame = 1


Query: 1  MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWN+ELQA+TYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNEELQAYTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLDHSNQKN-NKGLEPSKQHPIVVA 86
          DFL  S+Q + NKGL+PSKQ  + +A
Sbjct: 61 DFLGDSDQNHRNKGLQPSKQQTVTIA 86

The following BLAST results are available for this feature:

BLAST of CSPI07G08020 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DPH3_KLULA	5.6e-18	49.40	Diphthamide biosynthesis protein 3 OS=Kluyveromyces lactis (strain ATCC 8585 / C...	[more]
DPH3_SCHPO	2.1e-17	43.37	Diphthamide biosynthesis protein 3 OS=Schizosaccharomyces pombe (strain 972 / AT...	[more]
DPH3_ASHGO	2.8e-17	52.70	Diphthamide biosynthesis protein 3 OS=Ashbya gossypii (strain ATCC 10895 / CBS 1...	[more]
DPH3_USTMA	3.7e-17	56.45	Diphthamide biosynthesis protein 3 OS=Ustilago maydis (strain 521 / FGSC 9021) G...	[more]
DPH3_CAEEL	4.8e-17	57.38	DPH3 homolog OS=Caenorhabditis elegans GN=K01H12.1 PE=3 SV=1	[more]

BLAST of CSPI07G08020 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4W9_CUCSA	4.9e-45	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G075060 PE=4 SV=1	[more]
A0A0B2PEW4_GLYSO	6.5e-37	84.88	DPH3 like OS=Glycine soja GN=glysoja_031610 PE=4 SV=1	[more]
K7LPC5_SOYBN	6.5e-37	84.88	Uncharacterized protein OS=Glycine max GN=GLYMA_11G123600 PE=4 SV=1	[more]
I3SPP6_LOTJA	2.5e-36	83.72	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]
A0A0B2R0A8_GLYSO	3.2e-36	83.72	DPH3 like OS=Glycine soja GN=glysoja_010249 PE=4 SV=1	[more]

BLAST of CSPI07G08020 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G15910.1	1.6e-34	78.05	CSL zinc finger domain-containing protein	[more]

BLAST of CSPI07G08020 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449438452\|ref\|XP_004137002.1\|	7.1e-45	100.00	PREDICTED: diphthamide biosynthesis protein 3-like [Cucumis sativus]	[more]
gi\|659109803\|ref\|XP_008454889.1\|	5.1e-43	96.47	PREDICTED: diphthamide biosynthesis protein 3-like [Cucumis melo]	[more]
gi\|571488375\|ref\|XP_003537913.2\|	9.3e-37	84.88	PREDICTED: diphthamide biosynthesis protein 3 [Glycine max]	[more]
gi\|1009168474\|ref\|XP_015902678.1\|	1.6e-36	83.53	PREDICTED: diphthamide biosynthesis protein 3-like [Ziziphus jujuba]	[more]
gi\|388508344\|gb\|AFK42238.1\|	3.5e-36	83.72	unknown [Lotus japonicus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007872	Znf_DHP

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G08020.1	CSPI07G08020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007872	Zinc finger, DPH-type	PFAM	PF05207	zf-CSL	coord: 4..58 score: 1.2
IPR007872	Zinc finger, DPH-type	PROFILE	PS51074	ZF_DPH	coord: 2..58 score: 23
None	No IPR available	PANTHER	PTHR21454	FAMILY NOT NAMED	coord: 1..63 score: 1.7
None	No IPR available	unknown	SSF144217	CSL zinc finger	coord: 2..72 score: 2.09

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI07G08020	Cla015974	Watermelon (97103) v1	cpiwmB623
CSPI07G08020	Csa7G075060	Cucumber (Chinese Long) v2	cpicuB354
CSPI07G08020	MELO3C018416	Melon (DHL92) v3.5.1	cpimeB538
CSPI07G08020	ClCG02G005510	Watermelon (Charleston Gray)	cpiwcgB576
CSPI07G08020	Lsi11G010470	Bottle gourd (USVL1VR-Ls)	cpilsiB507
CSPI07G08020	MELO3C018416.2	Melon (DHL92) v3.6.1	cpimedB523
CSPI07G08020	CsaV3_7G010120	Cucumber (Chinese Long) v3	cpicucB415
CSPI07G08020	Cla97C02G032500	Watermelon (97103) v2	cpiwmbB554
CSPI07G08020	Bhi05G001032	Wax gourd	cpiwgoB674
CSPI07G08020	Cucsa.220230	Cucumber (Gy14) v1	cgycpiB336
CSPI07G08020	CmaCh19G006370	Cucurbita maxima (Rimu)	cmacpiB534
CSPI07G08020	CmaCh11G017790	Cucurbita maxima (Rimu)	cmacpiB143
CSPI07G08020	CmoCh11G013300	Cucurbita moschata (Rifu)	cmocpiB136
CSPI07G08020	CsGy7G007590	Cucumber (Gy14) v2	cgybcpiB332

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI07G08020	Wild cucumber (PI 183967)	cpicpiB091
CSPI07G08020	Wild cucumber (PI 183967)	cpicpiB094
CSPI07G08020	Cucurbita maxima (Rimu)	cmacpiB898
CSPI07G08020	Cucurbita moschata (Rifu)	cmocpiB525
CSPI07G08020	Cucurbita moschata (Rifu)	cmocpiB877
CSPI07G08020	Cucumber (Chinese Long) v2	cpicuB330
CSPI07G08020	Cucumber (Chinese Long) v2	cpicuB334
CSPI07G08020	Melon (DHL92) v3.5.1	cpimeB558
CSPI07G08020	Watermelon (Charleston Gray)	cpiwcgB552
CSPI07G08020	Watermelon (Charleston Gray)	cpiwcgB601
CSPI07G08020	Watermelon (97103) v1	cpiwmB584
CSPI07G08020	Watermelon (97103) v1	cpiwmB597
CSPI07G08020	Cucurbita pepo (Zucchini)	cpecpiB258
CSPI07G08020	Cucurbita pepo (Zucchini)	cpecpiB697
CSPI07G08020	Bottle gourd (USVL1VR-Ls)	cpilsiB502
CSPI07G08020	Bottle gourd (USVL1VR-Ls)	cpilsiB552
CSPI07G08020	Melon (DHL92) v3.6.1	cpimedB542
CSPI07G08020	Melon (DHL92) v3.6.1	cpimedB561
CSPI07G08020	Cucumber (Gy14) v2	cgybcpiB088
CSPI07G08020	Cucumber (Gy14) v2	cgybcpiB091
CSPI07G08020	Silver-seed gourd	carcpiB0239
CSPI07G08020	Silver-seed gourd	carcpiB0849
CSPI07G08020	Cucumber (Chinese Long) v3	cpicucB390
CSPI07G08020	Watermelon (97103) v2	cpiwmbB580
CSPI07G08020	Watermelon (97103) v2	cpiwmbB595