CsaV3_7G002970 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G002970
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionCalcium-binding EF-hand family protein
Locationchr7 : 2255105 .. 2255518 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCGTAGAATTACTTGACGGCGCCACCATAGTCAACTTTGTGGAAGACGAAGAAGCTTTCAATGGTTGGACTAGAGAGCACTTCACCCGTCTTGACACTGACCGCGACGGCTTCCTCTCCTACGCCGAGATGCTGAAGGAGTTGCATGCTTTGAGAGTCTCCGAAGCTGACTTTGGAACCGATGTGAAACCTGATGCCGATGAGCTCTCTCAACTCTACAGTGCCGTCTTCAAGCAGTTCGATCGGGATTCGGATGGAAAAGTTGACGTGGATGAGTTCATGATGGGGATGAAGAATATGATGTTGGCTATTGCTGAGGGAATGGGATTCTTGCCTATTCAAATGGCTTTGGAAAAAGATGGGTTCTTGATGAAAGCTGTTCAAAGAGAAGCCACCAAAGCCTTTTCTTGA

mRNA sequence

ATGAGCGTAGAATTACTTGACGGCGCCACCATAGTCAACTTTGTGGAAGACGAAGAAGCTTTCAATGGTTGGACTAGAGAGCACTTCACCCGTCTTGACACTGACCGCGACGGCTTCCTCTCCTACGCCGAGATGCTGAAGGAGTTGCATGCTTTGAGAGTCTCCGAAGCTGACTTTGGAACCGATGTGAAACCTGATGCCGATGAGCTCTCTCAACTCTACAGTGCCGTCTTCAAGCAGTTCGATCGGGATTCGGATGGAAAAGTTGACGTGGATGAGTTCATGATGGGGATGAAGAATATGATGTTGGCTATTGCTGAGGGAATGGGATTCTTGCCTATTCAAATGGCTTTGGAAAAAGATGGGTTCTTGATGAAAGCTGTTCAAAGAGAAGCCACCAAAGCCTTTTCTTGA

Coding sequence (CDS)

ATGAGCGTAGAATTACTTGACGGCGCCACCATAGTCAACTTTGTGGAAGACGAAGAAGCTTTCAATGGTTGGACTAGAGAGCACTTCACCCGTCTTGACACTGACCGCGACGGCTTCCTCTCCTACGCCGAGATGCTGAAGGAGTTGCATGCTTTGAGAGTCTCCGAAGCTGACTTTGGAACCGATGTGAAACCTGATGCCGATGAGCTCTCTCAACTCTACAGTGCCGTCTTCAAGCAGTTCGATCGGGATTCGGATGGAAAAGTTGACGTGGATGAGTTCATGATGGGGATGAAGAATATGATGTTGGCTATTGCTGAGGGAATGGGATTCTTGCCTATTCAAATGGCTTTGGAAAAAGATGGGTTCTTGATGAAAGCTGTTCAAAGAGAAGCCACCAAAGCCTTTTCTTGA

Protein sequence

MSVELLDGATIVNFVEDEEAFNGWTREHFTRLDTDRDGFLSYAEMLKELHALRVSEADFGTDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEKDGFLMKAVQREATKAFS
Homology
[Close]
BLAST of CsaV3_7G002970 vs. NCBI nr
Match: XP_004144609.1 (PREDICTED: uncharacterized protein LOC101208968 [Cucumis sativus])

HSP 1 Score: 273.9 bits (699), Expect = 3.1e-70
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0 

Query: 1   MSVELLDGATIVNFVEDEEAFNGWTREHFTRLDTDRDGFLSYAEMLKELHALRVSEADFG 60
           MSVELLDGATIVNFVEDEEAFNGWTREHFTRLDTDRDGFLSYAEMLKELHALRVSEADFG
Sbjct: 1   MSVELLDGATIVNFVEDEEAFNGWTREHFTRLDTDRDGFLSYAEMLKELHALRVSEADFG 60

Query: 61  TDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK 120
           TDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK
Sbjct: 61  TDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK 120

Query: 121 DGFLMKAVQREATKAFS 138
           DGFLMKAVQREATKAFS
Sbjct: 121 DGFLMKAVQREATKAFS 137

[Close]
BLAST of CsaV3_7G002970 vs. NCBI nr
Match: XP_008455505.1 (PREDICTED: uncharacterized protein LOC103495656 [Cucumis melo])

HSP 1 Score: 263.1 bits (671), Expect = 5.4e-67
Identity = 132/137 (96.35%), Postives = 133/137 (97.08%), Query Frame = 0 

Query: 1   MSVELLDGATIVNFVEDEEAFNGWTREHFTRLDTDRDGFLSYAEMLKELHALRVSEADFG 60
           MSVELLDGATIVNFVEDEEAFNGWTREHFTRLDTDRDGFLSYAEMLKE + LRVSEADFG
Sbjct: 1   MSVELLDGATIVNFVEDEEAFNGWTREHFTRLDTDRDGFLSYAEMLKEFYTLRVSEADFG 60

Query: 61  TDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK 120
           TDVK DADELSQLY AVFKQFDRDSDGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK
Sbjct: 61  TDVKLDADELSQLYGAVFKQFDRDSDGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK 120

Query: 121 DGFLMKAVQREATKAFS 138
           DGFLMKAVQREATKAFS
Sbjct: 121 DGFLMKAVQREATKAFS 137

[Close]
BLAST of CsaV3_7G002970 vs. NCBI nr
Match: XP_022135904.1 (uncharacterized protein LOC111007741 [Momordica charantia])

HSP 1 Score: 197.2 bits (500), Expect = 3.6e-47
Identity = 95/134 (70.90%), Postives = 112/134 (83.58%), Query Frame = 0 

Query: 1   MSVELLDGATIVNFVEDEEAFNGWTREHFTRLDTDRDGFLSYAEMLKELHALRVSEADFG 60
           MSVE+LD ATI+NFVEDEEAF  W RE F  LD DRDG LSYAEML+ELH+LRV E  FG
Sbjct: 1   MSVEILDSATIINFVEDEEAFGAWIRERFRHLDADRDGVLSYAEMLQELHSLRVYETHFG 60

Query: 61  TDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK 120
            D KPD DELS+LY AVF QFDR+S+G+VD++EFM G K +M+AIAEGMGFLP+QMALE+
Sbjct: 61  VDAKPDPDELSRLYGAVFMQFDRNSNGEVDLEEFMAGTKRIMVAIAEGMGFLPLQMALEE 120

Query: 121 DGFLMKAVQREATK 135
           DGFLMKAV+ E ++
Sbjct: 121 DGFLMKAVRSEKSR 134

[Close]
BLAST of CsaV3_7G002970 vs. NCBI nr
Match: XP_011657544.1 (PREDICTED: uncharacterized protein LOC105435869 [Cucumis sativus] >KGN47942.1 hypothetical protein Csa_6G418660 [Cucumis sativus])

HSP 1 Score: 178.7 bits (452), Expect = 1.3e-41
Identity = 88/131 (67.18%), Postives = 103/131 (78.63%), Query Frame = 0 

Query: 1   MSVELLDGATIVNFVEDEEAFNGWTREHFTRLDTDRDGFLSYAEMLKELHALRVSEADFG 60
           MSVE+LD ATIVNFVED+ AF  + R+ F  LDT+RDG LSY+EML+ELH LRV E  FG
Sbjct: 1   MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFG 60

Query: 61  TDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK 120
            DVKPD DELS +YS++F QFDRDS G VD+DEF    K MMLA+A GMGFLP+QM LE+
Sbjct: 61  IDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFRAETKRMMLAMANGMGFLPVQMVLEE 120

Query: 121 DGFLMKAVQRE 132
             FLMKAV+RE
Sbjct: 121 GSFLMKAVERE 131

[Close]
BLAST of CsaV3_7G002970 vs. NCBI nr
Match: XP_008455503.1 (PREDICTED: uncharacterized protein LOC103495655 [Cucumis melo])

HSP 1 Score: 177.6 bits (449), Expect = 3.0e-41
Identity = 87/134 (64.93%), Postives = 104/134 (77.61%), Query Frame = 0 

Query: 1   MSVELLDGATIVNFVEDEEAFNGWTREHFTRLDTDRDGFLSYAEMLKELHALRVSEADFG 60
           MSVE+LD ATIVNFVEDEEAF+GW RE F+ LD DRDG L Y EMLKEL +LRV E  FG
Sbjct: 1   MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVFETHFG 60

Query: 61  TDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK 120
            D KPD +ELS +Y+++F QFDRD +GKVD+ EFM   K MMLA+A G+G  P+QM LE+
Sbjct: 61  IDTKPDPNELSSVYASLFLQFDRDCNGKVDLGEFMAETKKMMLAMANGIGLSPVQMLLEE 120

Query: 121 DGFLMKAVQREATK 135
           + FL KAV RE+TK
Sbjct: 121 NSFLKKAVDRESTK 134

[Close]
BLAST of CsaV3_7G002970 vs. TAIR10
Match: AT2G44310.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 121.3 bits (303), Expect = 4.6e-28
Identity = 62/136 (45.59%), Postives = 88/136 (64.71%), Query Frame = 0 

Query: 1   MSVELLDGATIVNFVEDEEAFNGWTREHFTRLDTDRDGFLSYAEMLKELHALRVSEADFG 60
           M V L+DG+T+ +FV+DEE F     E F  LD ++DG LS +E+ K   ++R+ E+ FG
Sbjct: 1   MGVVLIDGSTVRSFVDDEEQFKKSVDERFAALDLNKDGVLSRSELRKAFESMRLLESHFG 60

Query: 61  TDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMAL-- 120
            DV    DEL+ LY ++F++FD D  G VD++EF   MK ++LAIA+G+G  PI M L  
Sbjct: 61  VDVVTPQDELTNLYDSIFEKFDTDQSGSVDLEEFRSEMKKIVLAIADGLGSCPITMVLDD 120

Query: 121 EKDGFLMKAVQREATK 135
           + D FL KA   EA+K
Sbjct: 121 DDDNFLKKAADLEASK 136

[Close]
BLAST of CsaV3_7G002970 vs. TAIR10
Match: AT1G54530.1 (Calcium-binding EF hand family protein)

HSP 1 Score: 65.5 bits (158), Expect = 3.0e-11
Identity = 39/128 (30.47%), Postives = 71/128 (55.47%), Query Frame = 0 

Query: 5   LLDGATIVNFVEDEEAFNGWTREHFTRLDTDRDGFLSYAEMLKELHALRVSEADFGTDVK 64
           ++   T++ F+ D ++F   T ++F  LD D++G LS +E+ + L+ +   E    ++V 
Sbjct: 5   VITSKTLIGFLSDTKSFESITNDYFQILDLDKNGMLSPSELRQGLNNVVAVE----SEVA 64

Query: 65  PDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEKDGFL 124
           P  DE   +Y+A+F++F  D   K     F   +  ++ A+A G+G  P+ M +  DG +
Sbjct: 65  P-GDETDNVYNAIFERFGEDLVPK----NFRDLIAEILTAMARGIGNSPVIMVVHNDGLI 123

Query: 125 MKAVQREA 133
           MKAV  E+
Sbjct: 125 MKAVLHES 123

[Close]
BLAST of CsaV3_7G002970 vs. TAIR10
Match: AT4G38810.2 (Calcium-binding EF-hand family protein)

HSP 1 Score: 59.7 bits (143), Expect = 1.6e-09
Identity = 38/119 (31.93%), Postives = 61/119 (51.26%), Query Frame = 0 

Query: 4   ELLDGATIVNFVEDEEAFNGWTREHFTRLDTDRDGFLSYAEMLKELHALRVSEADFGTDV 63
           ++LDG+ IV  VE+E+ F+ +  + F +LD D DG LS  E+   +  +  +        
Sbjct: 13  QVLDGSDIVELVENEKVFDKFVEQKFQQLDQDEDGKLSVTELQPAVADIGAALGLPAQGT 72

Query: 64  KPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEKDG 123
            PD+D    +YS V  +F   S  KV   EF   + +++L +A G+   PI + L  DG
Sbjct: 73  SPDSD---HIYSEVLNEFTHGSQEKVSKTEFKEVLSDILLGMAAGLKRDPI-VILRMDG 127

[Close]
BLAST of CsaV3_7G002970 vs. TAIR10
Match: AT5G28830.1 (calcium-binding EF hand family protein)

HSP 1 Score: 41.2 bits (95), Expect = 6.1e-04
Identity = 34/128 (26.56%), Postives = 60/128 (46.88%), Query Frame = 0 

Query: 3   VELLDGATIVNFVEDEEAFNGWTREHFTRLDTDRDGFLSYAEMLKELHALRVSEADFGTD 62
           V +LDG  +  F+EDE+ F       FT LD +  G L  +E+ K L  + V   + G  
Sbjct: 103 VSILDGTMLKMFLEDEDDFAMLAENLFTDLDEEDKGKLCKSEIRKALVHMGV---EMGV- 162

Query: 63  VKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEKDG 122
             P   E   +   + K+ D DSD ++   +F   ++ ++  IA+ +   PI + L  + 
Sbjct: 163 --PPLSEF-PILDDIIKKHDADSDEELGQAQFAELLQQVLQEIADVLHEKPITIVLNVEI 222

Query: 123 FLMKAVQR 131
           F    +++
Sbjct: 223 FTGSRIRK 223

[Close]
BLAST of CsaV3_7G002970 vs. TrEMBL
Match: tr|A0A1S3C0M6|A0A1S3C0M6_CUCME (uncharacterized protein LOC103495656 OS=Cucumis melo OX=3656 GN=LOC103495656 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 3.6e-67
Identity = 132/137 (96.35%), Postives = 133/137 (97.08%), Query Frame = 0 

Query: 1   MSVELLDGATIVNFVEDEEAFNGWTREHFTRLDTDRDGFLSYAEMLKELHALRVSEADFG 60
           MSVELLDGATIVNFVEDEEAFNGWTREHFTRLDTDRDGFLSYAEMLKE + LRVSEADFG
Sbjct: 1   MSVELLDGATIVNFVEDEEAFNGWTREHFTRLDTDRDGFLSYAEMLKEFYTLRVSEADFG 60

Query: 61  TDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK 120
           TDVK DADELSQLY AVFKQFDRDSDGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK
Sbjct: 61  TDVKLDADELSQLYGAVFKQFDRDSDGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK 120

Query: 121 DGFLMKAVQREATKAFS 138
           DGFLMKAVQREATKAFS
Sbjct: 121 DGFLMKAVQREATKAFS 137

[Close]
BLAST of CsaV3_7G002970 vs. TrEMBL
Match: tr|A0A0A0KHT7|A0A0A0KHT7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G418660 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 8.9e-42
Identity = 88/131 (67.18%), Postives = 103/131 (78.63%), Query Frame = 0 

Query: 1   MSVELLDGATIVNFVEDEEAFNGWTREHFTRLDTDRDGFLSYAEMLKELHALRVSEADFG 60
           MSVE+LD ATIVNFVED+ AF  + R+ F  LDT+RDG LSY+EML+ELH LRV E  FG
Sbjct: 1   MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFG 60

Query: 61  TDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK 120
            DVKPD DELS +YS++F QFDRDS G VD+DEF    K MMLA+A GMGFLP+QM LE+
Sbjct: 61  IDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFRAETKRMMLAMANGMGFLPVQMVLEE 120

Query: 121 DGFLMKAVQRE 132
             FLMKAV+RE
Sbjct: 121 GSFLMKAVERE 131

[Close]
BLAST of CsaV3_7G002970 vs. TrEMBL
Match: tr|A0A1S3C1T0|A0A1S3C1T0_CUCME (uncharacterized protein LOC103495655 OS=Cucumis melo OX=3656 GN=LOC103495655 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.0e-41
Identity = 87/134 (64.93%), Postives = 104/134 (77.61%), Query Frame = 0 

Query: 1   MSVELLDGATIVNFVEDEEAFNGWTREHFTRLDTDRDGFLSYAEMLKELHALRVSEADFG 60
           MSVE+LD ATIVNFVEDEEAF+GW RE F+ LD DRDG L Y EMLKEL +LRV E  FG
Sbjct: 1   MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVFETHFG 60

Query: 61  TDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK 120
            D KPD +ELS +Y+++F QFDRD +GKVD+ EFM   K MMLA+A G+G  P+QM LE+
Sbjct: 61  IDTKPDPNELSSVYASLFLQFDRDCNGKVDLGEFMAETKKMMLAMANGIGLSPVQMLLEE 120

Query: 121 DGFLMKAVQREATK 135
           + FL KAV RE+TK
Sbjct: 121 NSFLKKAVDRESTK 134

[Close]
BLAST of CsaV3_7G002970 vs. TrEMBL
Match: tr|F6HIA0|F6HIA0_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0059g00370 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.3e-40
Identity = 86/134 (64.18%), Postives = 105/134 (78.36%), Query Frame = 0 

Query: 1   MSVELLDGATIVNFVEDEEAFNGWTREHFTRLDTDRDGFLSYAEMLKELHALRVSEADFG 60
           MSVE+LDGATIV+FVEDEEAFNG   + F+ LDT+ DGFLSYAEMLKE  +LRV E  FG
Sbjct: 1   MSVEVLDGATIVSFVEDEEAFNGLIHDRFSNLDTNHDGFLSYAEMLKEFQSLRVFETHFG 60

Query: 61  TDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK 120
            DVK D DEL+ +Y ++F +FD D++G VD++EF    K MMLA+A G+GFLP+QM LE+
Sbjct: 61  IDVKRDPDELAHVYDSLFVKFDHDANGAVDLEEFRKETKQMMLAMANGLGFLPVQMVLEE 120

Query: 121 DGFLMKAVQREATK 135
           D FL KAVQREA K
Sbjct: 121 DSFLKKAVQREAIK 134

[Close]
BLAST of CsaV3_7G002970 vs. TrEMBL
Match: tr|A0A1S3C175|A0A1S3C175_CUCME (uncharacterized protein LOC103495653 OS=Cucumis melo OX=3656 GN=LOC103495653 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.2e-40
Identity = 86/131 (65.65%), Postives = 103/131 (78.63%), Query Frame = 0 

Query: 1   MSVELLDGATIVNFVEDEEAFNGWTREHFTRLDTDRDGFLSYAEMLKELHALRVSEADFG 60
           MSVE+LD  TIVNFVEDE AFN + R+ FT LDT+ DG LSY EML+EL +LRV EADFG
Sbjct: 1   MSVEILDSTTIVNFVEDEAAFNAYIRDRFTHLDTNHDGLLSYNEMLEELQSLRVFEADFG 60

Query: 61  TDVKPDADELSQLYSAVFKQFDRDSDGKVDVDEFMMGMKNMMLAIAEGMGFLPIQMALEK 120
            D K D DELS +YS++F QFDRDSDG VD+D +   +K MMLA+A G+GFLP+QM LE+
Sbjct: 61  NDKKLDPDELSSVYSSLFLQFDRDSDGMVDLDAYKTEIKRMMLAMANGIGFLPVQMVLEE 120

Query: 121 DGFLMKAVQRE 132
             FLMKAV+RE
Sbjct: 121 GSFLMKAVERE 131

The following BLAST results are available for this feature:
BLAST of CsaV3_7G002970 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004144609.13.1e-70100.00PREDICTED: uncharacterized protein LOC101208968 [Cucumis sativus][more]
XP_008455505.15.4e-6796.35PREDICTED: uncharacterized protein LOC103495656 [Cucumis melo][more]
XP_022135904.13.6e-4770.90uncharacterized protein LOC111007741 [Momordica charantia][more]
XP_011657544.11.3e-4167.18PREDICTED: uncharacterized protein LOC105435869 [Cucumis sativus] >KGN47942.1 hy... [more]
XP_008455503.13.0e-4164.93PREDICTED: uncharacterized protein LOC103495655 [Cucumis melo][more]
BLAST of CsaV3_7G002970 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G44310.14.6e-2845.59Calcium-binding EF-hand family protein[more]
AT1G54530.13.0e-1130.47Calcium-binding EF hand family protein[more]
AT4G38810.21.6e-0931.93Calcium-binding EF-hand family protein[more]
AT5G28830.16.1e-0426.56calcium-binding EF hand family protein[more]
BLAST of CsaV3_7G002970 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G002970 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C0M6|A0A1S3C0M6_CUCME3.6e-6796.35uncharacterized protein LOC103495656 OS=Cucumis melo OX=3656 GN=LOC103495656 PE=... [more]
tr|A0A0A0KHT7|A0A0A0KHT7_CUCSA8.9e-4267.18Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G418660 PE=4 SV=1[more]
tr|A0A1S3C1T0|A0A1S3C1T0_CUCME2.0e-4164.93uncharacterized protein LOC103495655 OS=Cucumis melo OX=3656 GN=LOC103495655 PE=... [more]
tr|F6HIA0|F6HIA0_VITVI1.3e-4064.18Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0059g00370 PE=4 SV=... [more]
tr|A0A1S3C175|A0A1S3C175_CUCME2.2e-4065.65uncharacterized protein LOC103495653 OS=Cucumis melo OX=3656 GN=LOC103495653 PE=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G002970.1CsaV3_7G002970.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 24..52
e-value: 1.4
score: 16.7
coord: 73..101
e-value: 5.5E-4
score: 29.2
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 26..95
e-value: 5.8E-11
score: 42.6
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 26..55
score: 8.376
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 69..104
score: 13.398
NoneNo IPR availableGENE3DG3DSA:1.10.238.10coord: 4..107
e-value: 1.1E-13
score: 53.7
NoneNo IPR availablePANTHERPTHR44089FAMILY NOT NAMEDcoord: 1..135
NoneNo IPR availablePANTHERPTHR44089:SF4SUBFAMILY NOT NAMEDcoord: 1..135
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 33..45
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 82..94
IPR011992EF-hand domain pairSUPERFAMILYSSF47473EF-handcoord: 26..100

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_7G002970CSPI07G03090Wild cucumber (PI 183967)cpicucB415
CsaV3_7G002970Cucsa.181060Cucumber (Gy14) v1cgycucB292
CsaV3_7G002970CmaCh11G017880Cucurbita maxima (Rimu)cmacucB0172
CsaV3_7G002970CmaCh11G012640Cucurbita maxima (Rimu)cmacucB0176
CsaV3_7G002970CmaCh19G008860Cucurbita maxima (Rimu)cmacucB0638
CsaV3_7G002970CmoCh19G009000Cucurbita moschata (Rifu)cmocucB0622
CsaV3_7G002970CmoCh11G018590Cucurbita moschata (Rifu)cmocucB0155
CsaV3_7G002970Cp4.1LG15g07200Cucurbita pepo (Zucchini)cpecucB0322
CsaV3_7G002970Cp4.1LG04g03830Cucurbita pepo (Zucchini)cpecucB0863
CsaV3_7G002970CsGy7G002760Cucumber (Gy14) v2cgybcucB348
CsaV3_7G002970Carg04170Silver-seed gourdcarcucB0232
CsaV3_7G002970Carg18052Silver-seed gourdcarcucB1114
CsaV3_7G002970Cla015648Watermelon (97103) v1cucwmB634
CsaV3_7G002970MELO3C018876Melon (DHL92) v3.5.1cucmeB547
CsaV3_7G002970ClCG02G002430Watermelon (Charleston Gray)cucwcgB571
CsaV3_7G002970Lsi11G013850Bottle gourd (USVL1VR-Ls)cuclsiB529
CsaV3_7G002970MELO3C018876.2Melon (DHL92) v3.6.1cucmedB535
CsaV3_7G002970Cla97C02G028880Watermelon (97103) v2cucwmbB549
CsaV3_7G002970Bhi05G001245Wax gourdcucwgoB695
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G002970Wax gourdcucwgoB694
CsaV3_7G002970Wax gourdcucwgoB703
CsaV3_7G002970Cucumber (Chinese Long) v3cuccucB099
CsaV3_7G002970Cucumber (Gy14) v2cgybcucB094
CsaV3_7G002970Cucumber (Gy14) v2cgybcucB349
CsaV3_7G002970Cucurbita pepo (Zucchini)cpecucB0367
CsaV3_7G002970Wild cucumber (PI 183967)cpicucB116
CsaV3_7G002970Wild cucumber (PI 183967)cpicucB419
CsaV3_7G002970Bottle gourd (USVL1VR-Ls)cuclsiB521
CsaV3_7G002970Melon (DHL92) v3.5.1cucmeB548
CsaV3_7G002970Melon (DHL92) v3.6.1cucmedB536
CsaV3_7G002970Watermelon (Charleston Gray)cucwcgB570
CsaV3_7G002970Watermelon (97103) v1cucwmB633
CsaV3_7G002970Watermelon (97103) v2cucwmbB548