Cla97C02G028880 (gene) Watermelon (97103) v2

Overview
NameCla97C02G028880
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionCalcium-binding EF-hand family protein
LocationCla97Chr02 : 2284711 .. 2285124 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGTGGAAATATTGGACAGTACGACCATTGTCAACTTTGTTGAAGATGAGGCAGCTTTTAGTGCCTACATAAGAGACCGGTTCAATTACCTCGACACTAACCATGATGGTCTCCTTTCCTATAATGAGCTACTGGAGGAGTTACAGAGCCTCAGGGTGTTCGAGACCGATTTCGGAATTGATGAGAAGCCTGATCCAGATGAGCTTTCTTCAGTGTATAGTTCTCTGTTTTTGCAATTCGATCGTGACTTGGATGGAACGGTTAATCTGGATGAGTATAAGACTGAGACCAAAAGAATGATGCTAGCTATGGCTAATGGGATGGGTTTCTTACCTGTTCAGATGGTGCTTGAAGAAGGCAGCTTCTTGATGAAGGCTGTTGAGCGAGAAACTGCAATAATGGCCGCTTGA

mRNA sequence

ATGAGTGTGGAAATATTGGACAGTACGACCATTGTCAACTTTGTTGAAGATGAGGCAGCTTTTAGTGCCTACATAAGAGACCGGTTCAATTACCTCGACACTAACCATGATGGTCTCCTTTCCTATAATGAGCTACTGGAGGAGTTACAGAGCCTCAGGGTGTTCGAGACCGATTTCGGAATTGATGAGAAGCCTGATCCAGATGAGCTTTCTTCAGTGTATAGTTCTCTGTTTTTGCAATTCGATCGTGACTTGGATGGAACGGTTAATCTGGATGAGTATAAGACTGAGACCAAAAGAATGATGCTAGCTATGGCTAATGGGATGGGTTTCTTACCTGTTCAGATGGTGCTTGAAGAAGGCAGCTTCTTGATGAAGGCTGTTGAGCGAGAAACTGCAATAATGGCCGCTTGA

Coding sequence (CDS)

ATGAGTGTGGAAATATTGGACAGTACGACCATTGTCAACTTTGTTGAAGATGAGGCAGCTTTTAGTGCCTACATAAGAGACCGGTTCAATTACCTCGACACTAACCATGATGGTCTCCTTTCCTATAATGAGCTACTGGAGGAGTTACAGAGCCTCAGGGTGTTCGAGACCGATTTCGGAATTGATGAGAAGCCTGATCCAGATGAGCTTTCTTCAGTGTATAGTTCTCTGTTTTTGCAATTCGATCGTGACTTGGATGGAACGGTTAATCTGGATGAGTATAAGACTGAGACCAAAAGAATGATGCTAGCTATGGCTAATGGGATGGGTTTCTTACCTGTTCAGATGGTGCTTGAAGAAGGCAGCTTCTTGATGAAGGCTGTTGAGCGAGAAACTGCAATAATGGCCGCTTGA

Protein sequence

MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFGIDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKRMMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA
Homology
[Close]
BLAST of Cla97C02G028880 vs. NCBI nr
Match: XP_008455501.1 (PREDICTED: uncharacterized protein LOC103495653 [Cucumis melo])

HSP 1 Score: 238.4 bits (607), Expect = 1.4e-59
Identity = 123/137 (89.78%), Postives = 129/137 (94.16%), Query Frame = 0 

Query: 1   MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFG 60
           MSVEILDSTTIVNFVEDEAAF+AYIRDRF +LDTNHDGLLSYNE+LEELQSLRVFE DFG
Sbjct: 1   MSVEILDSTTIVNFVEDEAAFNAYIRDRFTHLDTNHDGLLSYNEMLEELQSLRVFEADFG 60

Query: 61  IDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKRMMLAMANGMGFLPVQMVLEE 120
            D+K DPDELSSVYSSLFLQFDRD DG V+LD YKTE KRMMLAMANG+GFLPVQMVLEE
Sbjct: 61  NDKKLDPDELSSVYSSLFLQFDRDSDGMVDLDAYKTEIKRMMLAMANGIGFLPVQMVLEE 120

Query: 121 GSFLMKAVERETAIMAA 138
           GSFLMKAVERETAIMAA
Sbjct: 121 GSFLMKAVERETAIMAA 137

[Close]
BLAST of Cla97C02G028880 vs. NCBI nr
Match: XP_011658679.1 (PREDICTED: uncharacterized protein LOC105436072 [Cucumis sativus] >KGN43459.1 hypothetical protein Csa_7G037625 [Cucumis sativus])

HSP 1 Score: 227.3 bits (578), Expect = 3.3e-56
Identity = 118/137 (86.13%), Postives = 126/137 (91.97%), Query Frame = 0 

Query: 1   MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFG 60
           MSVEILD TTIVNFVEDEAAF+AYIR +F +LDT+HDGLLSYNE+LEELQSLRVF+ DFG
Sbjct: 1   MSVEILDGTTIVNFVEDEAAFNAYIRAQFAHLDTDHDGLLSYNEMLEELQSLRVFDADFG 60

Query: 61  IDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKRMMLAMANGMGFLPVQMVLEE 120
            DEK  PDELSSVYSSLFLQFDRD DG V+LD YKTE KRMMLAMANG+GFLPVQMVLEE
Sbjct: 61  NDEKLGPDELSSVYSSLFLQFDRDSDGMVDLDAYKTEIKRMMLAMANGIGFLPVQMVLEE 120

Query: 121 GSFLMKAVERETAIMAA 138
           GSFLMKAVERETAIMAA
Sbjct: 121 GSFLMKAVERETAIMAA 137

[Close]
BLAST of Cla97C02G028880 vs. NCBI nr
Match: XP_011657544.1 (PREDICTED: uncharacterized protein LOC105435869 [Cucumis sativus] >KGN47942.1 hypothetical protein Csa_6G418660 [Cucumis sativus])

HSP 1 Score: 226.9 bits (577), Expect = 4.3e-56
Identity = 116/137 (84.67%), Postives = 125/137 (91.24%), Query Frame = 0 

Query: 1   MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFG 60
           MSVEILDS TIVNFVED+ AF A+IRDRF +LDTN DGLLSY+E+LEEL +LRVFET FG
Sbjct: 1   MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFG 60

Query: 61  IDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKRMMLAMANGMGFLPVQMVLEE 120
           ID KPDPDELSSVYSSLFLQFDRD  GTV+LDE++ ETKRMMLAMANGMGFLPVQMVLEE
Sbjct: 61  IDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFRAETKRMMLAMANGMGFLPVQMVLEE 120

Query: 121 GSFLMKAVERETAIMAA 138
           GSFLMKAVERETAI AA
Sbjct: 121 GSFLMKAVERETAITAA 137

[Close]
BLAST of Cla97C02G028880 vs. NCBI nr
Match: XP_008449396.1 (PREDICTED: uncharacterized protein LOC103491294 [Cucumis melo])

HSP 1 Score: 225.3 bits (573), Expect = 1.2e-55
Identity = 115/137 (83.94%), Postives = 124/137 (90.51%), Query Frame = 0 

Query: 1   MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFG 60
           MSVEILDS TIVNFVED+ AF A+IRDRF +LDTNHDGLLSY+E+LEEL +LRVFET FG
Sbjct: 1   MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFG 60

Query: 61  IDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKRMMLAMANGMGFLPVQMVLEE 120
           ID KPDP+ELSSVYSSLFLQFD D  GTV+LDE+K ETKRMML MANGMGFLPVQMVLEE
Sbjct: 61  IDVKPDPEELSSVYSSLFLQFDHDSSGTVDLDEFKAETKRMMLDMANGMGFLPVQMVLEE 120

Query: 121 GSFLMKAVERETAIMAA 138
           GSFLMKAVERETAI AA
Sbjct: 121 GSFLMKAVERETAITAA 137

[Close]
BLAST of Cla97C02G028880 vs. NCBI nr
Match: XP_022135623.1 (uncharacterized protein LOC111007532 [Momordica charantia])

HSP 1 Score: 225.3 bits (573), Expect = 1.2e-55
Identity = 116/137 (84.67%), Postives = 122/137 (89.05%), Query Frame = 0 

Query: 1   MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFG 60
           MSVEILDS TIVNFVEDEAAF A+IRDRF +LDTNHDGLLSY E+L ELQSLRVFE  FG
Sbjct: 1   MSVEILDSATIVNFVEDEAAFDAFIRDRFAHLDTNHDGLLSYTEMLRELQSLRVFEIHFG 60

Query: 61  IDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKRMMLAMANGMGFLPVQMVLEE 120
           ID KPDPDELS+VYSSLFLQFD D  G V+LDE+K ETKRMMLA ANGMGFLPVQMVLEE
Sbjct: 61  IDVKPDPDELSTVYSSLFLQFDHDSSGKVDLDEFKAETKRMMLATANGMGFLPVQMVLEE 120

Query: 121 GSFLMKAVERETAIMAA 138
           GSFLMKAVERET IMAA
Sbjct: 121 GSFLMKAVERETTIMAA 137

[Close]
BLAST of Cla97C02G028880 vs. TrEMBL
Match: tr|A0A1S3C175|A0A1S3C175_CUCME (uncharacterized protein LOC103495653 OS=Cucumis melo OX=3656 GN=LOC103495653 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 9.4e-60
Identity = 123/137 (89.78%), Postives = 129/137 (94.16%), Query Frame = 0 

Query: 1   MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFG 60
           MSVEILDSTTIVNFVEDEAAF+AYIRDRF +LDTNHDGLLSYNE+LEELQSLRVFE DFG
Sbjct: 1   MSVEILDSTTIVNFVEDEAAFNAYIRDRFTHLDTNHDGLLSYNEMLEELQSLRVFEADFG 60

Query: 61  IDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKRMMLAMANGMGFLPVQMVLEE 120
            D+K DPDELSSVYSSLFLQFDRD DG V+LD YKTE KRMMLAMANG+GFLPVQMVLEE
Sbjct: 61  NDKKLDPDELSSVYSSLFLQFDRDSDGMVDLDAYKTEIKRMMLAMANGIGFLPVQMVLEE 120

Query: 121 GSFLMKAVERETAIMAA 138
           GSFLMKAVERETAIMAA
Sbjct: 121 GSFLMKAVERETAIMAA 137

[Close]
BLAST of Cla97C02G028880 vs. TrEMBL
Match: tr|A0A0A0K3B2|A0A0A0K3B2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037625 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 2.2e-56
Identity = 118/137 (86.13%), Postives = 126/137 (91.97%), Query Frame = 0 

Query: 1   MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFG 60
           MSVEILD TTIVNFVEDEAAF+AYIR +F +LDT+HDGLLSYNE+LEELQSLRVF+ DFG
Sbjct: 1   MSVEILDGTTIVNFVEDEAAFNAYIRAQFAHLDTDHDGLLSYNEMLEELQSLRVFDADFG 60

Query: 61  IDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKRMMLAMANGMGFLPVQMVLEE 120
            DEK  PDELSSVYSSLFLQFDRD DG V+LD YKTE KRMMLAMANG+GFLPVQMVLEE
Sbjct: 61  NDEKLGPDELSSVYSSLFLQFDRDSDGMVDLDAYKTEIKRMMLAMANGIGFLPVQMVLEE 120

Query: 121 GSFLMKAVERETAIMAA 138
           GSFLMKAVERETAIMAA
Sbjct: 121 GSFLMKAVERETAIMAA 137

[Close]
BLAST of Cla97C02G028880 vs. TrEMBL
Match: tr|A0A0A0KHT7|A0A0A0KHT7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G418660 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.8e-56
Identity = 116/137 (84.67%), Postives = 125/137 (91.24%), Query Frame = 0 

Query: 1   MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFG 60
           MSVEILDS TIVNFVED+ AF A+IRDRF +LDTN DGLLSY+E+LEEL +LRVFET FG
Sbjct: 1   MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFG 60

Query: 61  IDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKRMMLAMANGMGFLPVQMVLEE 120
           ID KPDPDELSSVYSSLFLQFDRD  GTV+LDE++ ETKRMMLAMANGMGFLPVQMVLEE
Sbjct: 61  IDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFRAETKRMMLAMANGMGFLPVQMVLEE 120

Query: 121 GSFLMKAVERETAIMAA 138
           GSFLMKAVERETAI AA
Sbjct: 121 GSFLMKAVERETAITAA 137

[Close]
BLAST of Cla97C02G028880 vs. TrEMBL
Match: tr|A0A1S3BLY5|A0A1S3BLY5_CUCME (uncharacterized protein LOC103491294 OS=Cucumis melo OX=3656 GN=LOC103491294 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 8.2e-56
Identity = 115/137 (83.94%), Postives = 124/137 (90.51%), Query Frame = 0 

Query: 1   MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFG 60
           MSVEILDS TIVNFVED+ AF A+IRDRF +LDTNHDGLLSY+E+LEEL +LRVFET FG
Sbjct: 1   MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFG 60

Query: 61  IDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKRMMLAMANGMGFLPVQMVLEE 120
           ID KPDP+ELSSVYSSLFLQFD D  GTV+LDE+K ETKRMML MANGMGFLPVQMVLEE
Sbjct: 61  IDVKPDPEELSSVYSSLFLQFDHDSSGTVDLDEFKAETKRMMLDMANGMGFLPVQMVLEE 120

Query: 121 GSFLMKAVERETAIMAA 138
           GSFLMKAVERETAI AA
Sbjct: 121 GSFLMKAVERETAITAA 137

[Close]
BLAST of Cla97C02G028880 vs. TrEMBL
Match: tr|V4U9W3|V4U9W3_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10018069mg PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 3.3e-49
Identity = 101/137 (73.72%), Postives = 123/137 (89.78%), Query Frame = 0 

Query: 1   MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFG 60
           MSVE+LDS TIV+FVEDE AF+  IR+RF +LDT+HDGLLSY E+++EL+SLRVFET FG
Sbjct: 1   MSVEVLDSATIVSFVEDEEAFNNSIRNRFAHLDTDHDGLLSYAEMMQELKSLRVFETHFG 60

Query: 61  IDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKRMMLAMANGMGFLPVQMVLEE 120
           IDEKPDP+EL+SVY+SLF+QFD D +GTV+L+E+K ETK+MMLAMANG+GFLPVQMVLEE
Sbjct: 61  IDEKPDPEELASVYNSLFVQFDHDSNGTVDLEEFKAETKQMMLAMANGLGFLPVQMVLEE 120

Query: 121 GSFLMKAVERETAIMAA 138
            SFLMKAVE+E+   AA
Sbjct: 121 DSFLMKAVEKESTAKAA 137

[Close]
BLAST of Cla97C02G028880 vs. TAIR10
Match: AT2G44310.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 113.2 bits (282), Expect = 1.2e-25
Identity = 55/135 (40.74%), Postives = 94/135 (69.63%), Query Frame = 0 

Query: 1   MSVEILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFG 60
           M V ++D +T+ +FV+DE  F   + +RF  LD N DG+LS +EL +  +S+R+ E+ FG
Sbjct: 1   MGVVLIDGSTVRSFVDDEEQFKKSVDERFAALDLNKDGVLSRSELRKAFESMRLLESHFG 60

Query: 61  IDEKPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKRMMLAMANGMGFLPVQMVL-- 120
           +D     DEL+++Y S+F +FD D  G+V+L+E+++E K+++LA+A+G+G  P+ MVL  
Sbjct: 61  VDVVTPQDELTNLYDSIFEKFDTDQSGSVDLEEFRSEMKKIVLAIADGLGSCPITMVLDD 120

Query: 121 EEGSFLMKAVERETA 134
           ++ +FL KA + E +
Sbjct: 121 DDDNFLKKAADLEAS 135

[Close]
BLAST of Cla97C02G028880 vs. TAIR10
Match: AT1G54530.1 (Calcium-binding EF hand family protein)

HSP 1 Score: 61.6 bits (148), Expect = 4.3e-10
Identity = 39/128 (30.47%), Postives = 67/128 (52.34%), Query Frame = 0 

Query: 5   ILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFGIDEK 64
           ++ S T++ F+ D  +F +   D F  LD + +G+LS +EL + L ++   E+     E 
Sbjct: 5   VITSKTLIGFLSDTKSFESITNDYFQILDLDKNGMLSPSELRQGLNNVVAVES-----EV 64

Query: 65  PDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKRMMLAMANGMGFLPVQMVLEEGSFL 124
              DE  +VY+++F +F  DL        ++     ++ AMA G+G  PV MV+     +
Sbjct: 65  APGDETDNVYNAIFERFGEDLVP----KNFRDLIAEILTAMARGIGNSPVIMVVHNDGLI 123

Query: 125 MKAVERET 133
           MKAV  E+
Sbjct: 125 MKAVLHES 123

[Close]
BLAST of Cla97C02G028880 vs. TAIR10
Match: AT4G38810.2 (Calcium-binding EF-hand family protein)

HSP 1 Score: 50.4 bits (119), Expect = 9.9e-07
Identity = 32/125 (25.60%), Postives = 58/125 (46.40%), Query Frame = 0 

Query: 4   EILDSTTIVNFVEDEAAFSAYIRDRFNYLDTNHDGLLSYNELLEELQSLRVFETDFGIDE 63
           ++LD + IV  VE+E  F  ++  +F  LD + DG LS  EL   +  +       G+  
Sbjct: 13  QVLDGSDIVELVENEKVFDKFVEQKFQQLDQDEDGKLSVTELQPAVADI---GAALGLPA 72

Query: 64  KPDPDELSSVYSSLFLQFDRDLDGTVNLDEYKTETKRMMLAMANGMGFLPVQMVLEEGSF 123
           +    +   +YS +  +F       V+  E+K     ++L MA G+   P+ ++  +G  
Sbjct: 73  QGTSPDSDHIYSEVLNEFTHGSQEKVSKTEFKEVLSDILLGMAAGLKRDPIVILRMDGED 132

Query: 124 LMKAV 129
           L + V
Sbjct: 133 LSEFV 134

The following BLAST results are available for this feature:
BLAST of Cla97C02G028880 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008455501.11.4e-5989.78PREDICTED: uncharacterized protein LOC103495653 [Cucumis melo][more]
XP_011658679.13.3e-5686.13PREDICTED: uncharacterized protein LOC105436072 [Cucumis sativus] >KGN43459.1 hy... [more]
XP_011657544.14.3e-5684.67PREDICTED: uncharacterized protein LOC105435869 [Cucumis sativus] >KGN47942.1 hy... [more]
XP_008449396.11.2e-5583.94PREDICTED: uncharacterized protein LOC103491294 [Cucumis melo][more]
XP_022135623.11.2e-5584.67uncharacterized protein LOC111007532 [Momordica charantia][more]
BLAST of Cla97C02G028880 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C175|A0A1S3C175_CUCME9.4e-6089.78uncharacterized protein LOC103495653 OS=Cucumis melo OX=3656 GN=LOC103495653 PE=... [more]
tr|A0A0A0K3B2|A0A0A0K3B2_CUCSA2.2e-5686.13Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037625 PE=4 SV=1[more]
tr|A0A0A0KHT7|A0A0A0KHT7_CUCSA2.8e-5684.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G418660 PE=4 SV=1[more]
tr|A0A1S3BLY5|A0A1S3BLY5_CUCME8.2e-5683.94uncharacterized protein LOC103491294 OS=Cucumis melo OX=3656 GN=LOC103491294 PE=... [more]
tr|V4U9W3|V4U9W3_9ROSI3.3e-4973.72Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10018069mg PE=4 ... [more]
BLAST of Cla97C02G028880 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C02G028880 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G44310.11.2e-2540.74Calcium-binding EF-hand family protein[more]
AT1G54530.14.3e-1030.47Calcium-binding EF hand family protein[more]
AT4G38810.29.9e-0725.60Calcium-binding EF-hand family protein[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C02G028880.1Cla97C02G028880.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 25..96
e-value: 1.1E-10
score: 41.8
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 20..55
score: 9.632
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 69..104
score: 8.153
NoneNo IPR availableGENE3DG3DSA:1.10.238.10coord: 6..107
e-value: 9.3E-11
score: 44.0
NoneNo IPR availablePANTHERPTHR44089FAMILY NOT NAMEDcoord: 1..136
NoneNo IPR availablePANTHERPTHR44089:SF4SUBFAMILY NOT NAMEDcoord: 1..136
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 33..45
IPR011992EF-hand domain pairSUPERFAMILYSSF47473EF-handcoord: 23..96

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C02G028880Cla015648Watermelon (97103) v1wmwmbB317
Cla97C02G028880Csa7G037620Cucumber (Chinese Long) v2cuwmbB529
Cla97C02G028880MELO3C018876Melon (DHL92) v3.5.1mewmbB178
Cla97C02G028880ClCG02G002430Watermelon (Charleston Gray)wcgwmbB138
Cla97C02G028880CSPI07G03090Wild cucumber (PI 183967)cpiwmbB553
Cla97C02G028880Cucsa.181060Cucumber (Gy14) v1cgywmbB326
Cla97C02G028880CmaCh11G017880Cucurbita maxima (Rimu)cmawmbB105
Cla97C02G028880CmaCh19G008860Cucurbita maxima (Rimu)cmawmbB531
Cla97C02G028880CmaCh11G012640Cucurbita maxima (Rimu)cmawmbB101
Cla97C02G028880CmoCh11G018650Cucurbita moschata (Rifu)cmowmbB094
Cla97C02G028880CmoCh19G009000Cucurbita moschata (Rifu)cmowmbB512
Cla97C02G028880Lsi11G013850Bottle gourd (USVL1VR-Ls)lsiwmbB086
Cla97C02G028880CsGy7G002760Cucumber (Gy14) v2cgybwmbB502
Cla97C02G028880MELO3C018876.2Melon (DHL92) v3.6.1medwmbB164
Cla97C02G028880Carg04170Silver-seed gourdcarwmbB0202
Cla97C02G028880Carg18052Silver-seed gourdcarwmbB1124
Cla97C02G028880CsaV3_7G002970Cucumber (Chinese Long) v3cucwmbB549
Cla97C02G028880Bhi05G001245Wax gourdwgowmbB241
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C02G028880Watermelon (97103) v2wmbwmbB091
Cla97C02G028880Cucumber (Gy14) v2cgybwmbB118
Cla97C02G028880Cucumber (Gy14) v2cgybwmbB500
Cla97C02G028880Wild cucumber (PI 183967)cpiwmbB126
Cla97C02G028880Wild cucumber (PI 183967)cpiwmbB552
Cla97C02G028880Cucumber (Chinese Long) v3cucwmbB127
Cla97C02G028880Cucumber (Chinese Long) v3cucwmbB548
Cla97C02G028880Cucumber (Chinese Long) v2cuwmbB124
Cla97C02G028880Cucumber (Chinese Long) v2cuwmbB527
Cla97C02G028880Bottle gourd (USVL1VR-Ls)lsiwmbB055
Cla97C02G028880Melon (DHL92) v3.6.1medwmbB090
Cla97C02G028880Melon (DHL92) v3.5.1mewmbB094
Cla97C02G028880Watermelon (Charleston Gray)wcgwmbB150
Cla97C02G028880Wax gourdwgowmbB376