CsaV3_7G002090 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_7G002090
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Pectin lyase-like superfamily protein
Location	chr7 : 1668525 .. 1676139 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTGCACAACTTTCCTTCCCGGTTCTCTTTCTCTCCCATCCATATTTCTTCACCTTCCGCCATGGTGGTTTCTGGTTTCTTCACTTGCAAAACCTAACCACAGCCTCCGTTGGAGACGATTGTGGAAGCTGATTGAGGTTCACTGAGAAGCTGTTGTTGTTGTTGGGTTGTGAATTTTAGGGTTTCGAGGTGTGATTGGGCGGAATTGACGATGTCTTTGAGAATAAAGGCTGTGGTGGATAAATTCGTGGAGGAGCTCAAGGAAGCTTTGGATGCAGATATTCAAGATCGAATCATGAAGGAGAGAGAGATGCAGAGTTACATTGAAGAGCGTGAACGTGAGGTTGCTGAACGTGAAGCTGCTTGGAAAGCTGAGCTCTCTCGTCGTGAGGTACTTGATTGAATTCTCTGACTTTTTGTTAGTCAGAGCTGCTTAATTTTGAGATTACTGTTGGTGGGTTTTTTAACGATTTTTTTTAGTTAAGGAAATTATTCAGTCTTCATCGCTGAGTTTTTAATCTGGAAATGTAGACGTTTGCTGCTAAATCTTGCCATTTCTTAATTGATAATTTTGAGCCCTGTTCATAGCTTAATTAGTAGGGCGTCCTTTTCATAGTTAGATTATACTTTGGTCTTGTTTTTGAATTTTCATCGTGTAGTTGAATGCCTTTTTGCCATCTATTCAAATCAAGCATTTCACCTTCTTTATTTCTTCCCCTGACGTGGTACTCTTACCTTTTTAGTAGTCAAATAGTTGTTTTCTGGACTTCACCAGCCATAACTGCATGAATTATAGGATACCCATTTCCTTTGTTGGTTGTTTTCATATTTTCCTCCAAATCTAGGAAGAGAATACAAGGAGTGCGGGATGATAAGTTCCCATGAGATGTTTGATATAGGGTTCTTAAGAGTTGGGAAACTTGGGTTTATGGAATCTGGAGTTTGATAGTTCGAGTTCATGTTAAGGAACAAGCTATAGATTCGTGGGTTTGGTTTGTAGGTTTATAGGTTTATAGGTTTATGATTGACATAAATGAGAAACCAGTAATATTATTAAACCTGTAGTTTAGGACAAACAAATGTACATTCTAAAGATAGATTTGGTTCCTTGAACATTAGTTTCTTTTCACTTCTTCAATGAAAAGTTTTGTTTCTTGTTAGGGAGAAGAGGGTCAATCCATCGTGGTTAGACAAGTTGTCCATAAGTTGTAATATCCTAAACCCTTGGATTTAATATCCTTTTAAGTTTTCTTAATCCCAAATATTTTGGAGTTAGGCAAGCTGTCTTGTCAGATTAATCGAGGATAAAAAAGAATCTATTAGTTTTGTGGTGCAGCCTAGCGGAATACATTCGGCTCTACCCAGAAAAGTAAGTTGGCAGCCTCACATAGATTATCTTACCTCAAGTCAGTCAGACAATTTAGGTGGGGAGGAACTCGAAGTTACCGAATAGGCAGATATTTGATTGTATCAAGTAGACGTTAATCAGTGAAAGGACTATTGAAGTAAATATGAGCTTGATTTTTTCTTTTAGGATAATAGTAAATTTGACTCATTTTGTTGGAGAAATTAGAATTTAGTCTTTGTGGTTTGATAAAAATTCTCATAATTTTGAATTCCATAAAAACTGCACACGAAGTTTTATTGAACCATAAGGACTAAATTCCAACTTTCTCCGAACGATAAGGACCAAGTTTGTAATTTAACTTTCTTTTTTTTCGTCATATTCTCAATTCACAATGTTTTCTCGCCCCCTTTTTCTTCTTAAATCAATTTACCATTCATCCATCCAGAAAGAAGAGTGCTTTTACATCTTGTTTTGATTTTTTTTCCTTCCTTCTTATAGGCCGAAATTGCAAGACAAGAAGCAAGGTTGAAGATGGAAAAGGAAAATCTGGAAAAAGAGAAAAGTGTGCTAATGGGAACTGCATCAAATCAAGACAACCAAGATGGAGCTCTTGAAATTACTGTAAGTGGTGAAAAGTATAGATGCCTTAGGTTTGCAAAGGCTAAAAAATGAGGCTGACATAATGATATGATAGTGAAAAAGGAAAAAGAAAAAAAAGTTAGTGTCTTGATTGTGGCCTCTTCTTCCTCTTAAGCTTGCTATAATTTTTTTTCAAAGCAAAATCATTATTAGTCTTGAAAGCTTCTAAGATGTACATGTAGATAATTATTTGCTACACCATCATGATTCTAGCAGTATTTATTAATCATTCCATTCCATTTTATCCAATGAATGAATCAATCTCCATCTCCCAAGAGCGTTCTGTTTCGTTTACTTTTTGGTACAACGGTAGGACATGAGATGAGATTGAACCTCCAACCTCCACGAAAAAATGGCATGTTAATTATTGTTGAGTTAAGCTCACTTTGCGATTATTATCTTTTCTTTTTCTCATTTGGTAAGGAAATGAATAAAACACAAACGGTCCAAAGTTTGAATAATTTGATCTCAGGTTTTACTAACAAGTAACATCCTCGATCCAAGTTTTTCATGGGTGCACTTTGTGGATTTTTGAATTTACATGATTTGTGATAACCTCTAGATACAACAAAACCGAGCAAATCGAGTATTGTTTAATTTTGTTTATGAATGCATTCACGATTCCTTCTCCTATTTAGACAAAACGATATACCAACTTCCGCTCTAATTAGGATGATATTAGTAAATTTTGGGTTAAACTACCAATTTGGCCTTCATGGTTTGATCTAGTTACGAGTTACAATTTAGCCTCTATGATTATAGGATTTTACGGTTTAAACTAATTAAGCAAAAGACTTAGAGGTTTACTATATTATCTTTCATTTTCATAGGATTGTTTCCGTTTGGATTTTAACTTCATCATGACATACATGCACAATGTGCAACATTTGGGTACATTATAATTGCACCATTTTTCTAAAGCAATGATTCCTTATATGCTTTTATCACTCTACGAAACAAAAATAAAAGTTTTAAAACAATATTTGGTACTTTTACGTATTTATGGTGGAGAGATAGAAAGCATATGAGATGGATGGATGCATCAAATATTTTTCTTTTATGTAAAGTTCATCATAACTGTACACTATAGTGTTTTTAAAATTACGTTGAAAATAAATCAATAATTTGTGGACTTAAAAAATATGAGAATCAAGATGCACTTTTTCTTTATATAATATTTTTATTGATTTAAAAATAATTTTAAGAAAGCATTTAAATCAAACAATTCAACAATTTTCATGGATTTGAACTACATCTCAATGCTCTTAAATATCAAAATATATTCATTCCCGAACGTAAAATGCTAATATTTCTATTGATTCAAAATTGCATATCTTTTCTAAAAATTTTAAAAAAAATCTTTTAAAATAGCAAATTTGACAAAATATTTATAAGATATAACCGATTTAATATTCTATTAATAATAAGCATTCGTTAACCGTTGTTATTTTTTGCTCTAATCGGTATATATTTTAATTTATTTTGTTATTTTAAAAAAAATCTCAAAATTGAATTAAATATTTTAGAATTTTGTAAATTTAAATACTATCACTTGTCACCTAAGGTTAGGGATTTGTATCAATTTTCAGCAAAATTATCTAAAATATTTATTAAATGTAACAAAATATAATTATCATATATAAATAATAGGTTGTTTTCTTTATTTACGATAATTTGTTATATTTATAAATATTTGGAAGCATTTTGTTATATAAAATAATTTCTCAAATTTAATCCCCAATTTATTTTCATTATTAGTAATTAGTTTGATTAACCTTTGAAGAAGAAATTGGCAAAACGGATATAAAAAGAAAAACTTCCATTTTGCATGATTCAACAAGCATGACATTCATGACGCTCAACCCACACGATCTCTCACCATTTTTTCTTACAACTAATGCTCTCTCAACCTCCGCCCTTCTCCGGTCCGGCGGCCCGTCGAGATTCTGTTCAACGGGCAGTGGCTCTAGGTGTATTTCTCTTTTTCATGTGTGCGACGGTTAACAATCAGAGACTTAGTGGGGGGAAAAGAAGTTAACGACGGTTAACTTTGGCGAATTCGAAATCCCCCTCTCCCATTTTATCAGCATCTCCGGTTGGAAATTTAAAACTCAAATACCGTTCCATTCATGAACCGGTAAGCTAAAAAAATCTCTTCCGATTTCAGTTTCTCTGAGCAGAAGCAAAGCTCTTGTTAAGCTATTAGCATGAATTTCACCTTTTACACTACACTTTTTTTGGTGCTCTCGTCTTCCTGTTCTAGCTCAGTTATTAGTAGAGGAATATTGGAATCAGACGTTTCAGGAAGCTTATTGCGTTACAGAACTAAGAGTTCTTCTCATGTTTTCAGTGTTAGAAGCTTTGGTGCCCGAGCAAATGGCTTGACTGATGATAGCAACGTCTGTTCTGCGTTTGTTTTTTGTTGCTTTTTTTTCTTTTTTTGTGGAAATTGTTTGAGATTTTACTTGATGAATTGTATTCCTTGAGCTCTGTTGCTCCCTTCAACTGTTGAGATTCTCTTCTCTGCTGCAATTTCCTGTACTTTTTATCCGTTTTTTGTTCCATTTCTTCAGCTCTCTAGAAACGACAACTTTGTTATTATATGCATTGTTCCTAAGGATTTCCATGAATCTCTCTTGTTGTGTTTTCTACTTGTCTACTCAAATTTAGAATCGTTCAATCAGATGTTTTCTGTTCTTAGTCCAATTTCTTGCTTGGTGGAAATGAAAATCCAGTTTCCTTCCAAATGGCGAGGATACATGATTAGGAATAGTAAAAAGTGTTTATTGACAAATTACATTGTGTTTGATTCTACATTCTTGAAGGGGTTTTAGGTGGTTCTCTAACAATCACAAGGTTTAATAGTACTATATGTGTGTGTGTGTGTGCTTTCTCATAAAACAATCAGTCTTTTTTTTTTTCAAATTGACAATATATTGTTTTCAAACGTGATGTTTCTGAGTAGGAAGTGGTTTTGCTTCAAAAAGATTAAGATCAGTTTTCAAAAGTTTTGATTTGCTTGTGATTCAGGCCTTCTTAGCAGCATGGAGGATGGCCTGTGACTCAGCTGGAGTTGTAACTTTCCTGATTCCAAAAGGAACCTATTTGGTTGGTCCAGTTATATTTTCTGGCCCTTGCAAAAACGTGTCATCTCTAACAGTTAAAATGGAGGCAAGGGTCTAGTCGTCTTCTTCTTTAGGCTTTCTTCGTCAAATTTGTTTGGTTTGAGACATTGCGCTCGAATGCAGGGCTATTTGAAGGCATCAACAAACCTTTCGAAATATGGTTCTGGTGCAGGCTGGATTGAGTTCAGATGGATGGAGGGGCTAACCTTGAATGGAGGTGGAACCTTTGATGGTCGAGGCGCTGAGGCATGGCCATTCAACAACTGCCGCGATGACTACAATTGCAAACTCCTTCCTACTGTAAATTCCATACCACATTTTGTTCTGTTTGAATTTTAATAAATTTCATGTCTTGAAAAACTAGAAATCGCAAGGATTGTTCTATTGCTGTCACTTGAAAACTGGTGAAATTATTTCAACGAACCATTTCGATCTCATGCCTTGAAACTTTAGGAATTGCAAGAAATGTTCCACTACAAACATATATTAGTAAGTTTAATAATGCATATCATTTCAAACTCATGTCTTGAAAGTTAAAACATTAGGACTTGGAAGAAACGTTATATTGCTGCCATTCGAAACATCAGTAAGATTCTTACAATATACCGTTTCAAACTCATGTCTTGAAGCATTGGTATTTCAAAAAATGTTTTATTCCTGCCGTTTGAAACATCAATTTAAATCTTAAAATGAGCGATTACAATTTGAAATATTATGAATTGCCATTCGAAAAATCAGTAAGATTCTTACAATGTCTTGGTTCTTTTTCAGAACTTGAAATTTGTGGCTTTGAATAATACGGTTGTTCAACACATAACTTCGCTGAACAGCAAGTTCTTTCACCTGGCTTTAGTTCAATGCAAGAGGTTCGTAGGTAGCGAACTCAAGATTTCTGCTCCAGAAAATAGTCCCAACACCGATGGCATCCACATTGACCGAAGTTCTAATATCCATTTTTCTTTATCACATATTCAAACGGGTGACGACTGCATATCCATCGGACAAGGGAACTCTCAAGTCACAATCTCTAGCGTCAACTGTGGACCTGGCCATGGGATCAGGTACATAGATTGCTACCAAAAGGTTTTATGCTTCTGTCATCTTTTATCCTATATTCAGCTACTAGAAGTAGTTTTCAGGATAACTGACTTTTGTTCACTGTAGTGTTGGAAGCTTGGGAAGATATCGAAATGAAGGAGACGTAAGCGGATTAGTAGTTAAAAATTGCAGCCTCACAGGTACCGCCAATGGGATCAGAATCAAGACATGGCCAAACTCTCCTGGTAGCAGCTCAGCCACAAACATGACATTTGAGAACATTACCATGAACAATGTGTCCAATCCAATTATCATTGATCAATCATACTGTCCATTCGGATTTTGTTCTTTCAAGGTAAGCCAGTGCTCTCTCAACTTAATCGTTTTACAAAAAGGACCGTAAACACGTGAGCAAACTATAGTATTTTCAGATATAAATTTCATTGTAGTCTTTGGACTTTCAAGTCCATTTTGTCGTAGCTTTTTCTAGTTCTTGGACTTTCAAAAGATTAACCGATACTAGCTTAGAGAGACCCAACTAGTTATCATCAAAACTTACGTACTAAAAATGGATATTTTGAAAGCTTAGATACCAAAAGGAAATATCGTATCTATAAATACTTTTTAGACGTTTAGTTCAAAAAATATCCTTTCTTAAACAAATTTCAAAACTATGGCAAAAAGTTATTGAATGGCAAATGCATTTCGGAGATGAGAAGCTGATTTATTTGGACAGGCACCATCTCTTGTGAAGCTGAGTGATATTTATTTCAAGAACATTAGAGGAACATCTTCCTCTAAAGTGGCTGTGGCATTAGAATGCAGCAAGGGATTCCCATGTCAGAATGTGAACCTTGAAAATGTTCACTTGGATCTTTCATCAGGAGAAAATCATCCATCTTCTACTTGCAAATATGTTAGAGCCAGGTATATTGGCACCCAAATCCCACCCCCTTGTGCTTAG

mRNA sequence

ATGTCTTTGAGAATAAAGGCTGTGGTGGATAAATTCGTGGAGGAGCTCAAGGAAGCTTTGGATGCAGATATTCAAGATCGAATCATGAAGGAGAGAGAGATGCAGAGTTACATTGAAGAGCGTGAACGTGAGGTTGCTGAACGTGAAGCTGCTTGGAAAGCTGAGCTCTCTCGTCGTGAGGCCGAAATTGCAAGACAAGAAGCAAGGTTGAAGATGGAAAAGGAAAATCTGGAAAAAGAGAAAAGTGTGCTAATGGGAACTGCATCAAATCAAGACAACCAAGATGGAGCTCTTGAAATTACTGCCTTCTTAGCAGCATGGAGGATGGCCTGTGACTCAGCTGGAGTTGTAACTTTCCTGATTCCAAAAGGAACCTATTTGGTTGGTCCAGTTATATTTTCTGGCCCTTGCAAAAACGTGTCATCTCTAACAGTTAAAATGGAGGGCTATTTGAAGGCATCAACAAACCTTTCGAAATATGGTTCTGGTGCAGGCTGGATTGAGTTCAGATGGATGGAGGGGCTAACCTTGAATGGAGGTGGAACCTTTGATGGTCGAGGCGCTGAGGCATGGCCATTCAACAACTGCCGCGATGACTACAATTGCAAACTCCTTCCTACTAACTTGAAATTTGTGGCTTTGAATAATACGGTTGTTCAACACATAACTTCGCTGAACAGCAAGTTCTTTCACCTGGCTTTAGTTCAATGCAAGAGGTTCGTAGGTAGCGAACTCAAGATTTCTGCTCCAGAAAATAGTCCCAACACCGATGGCATCCACATTGACCGAAGTTCTAATATCCATTTTTCTTTATCACATATTCAAACGGGTGACGACTGCATATCCATCGGACAAGGGAACTCTCAAGTCACAATCTCTAGCGTCAACTGTGGACCTGGCCATGGGATCAGTGTTGGAAGCTTGGGAAGATATCGAAATGAAGGAGACGTAAGCGGATTAGTAGTTAAAAATTGCAGCCTCACAGGTACCGCCAATGGGATCAGAATCAAGACATGGCCAAACTCTCCTGGTAGCAGCTCAGCCACAAACATGACATTTGAGAACATTACCATGAACAATGTGTCCAATCCAATTATCATTGATCAATCATACTGTCCATTCGGATTTTGTTCTTTCAAGGCACCATCTCTTGTGAAGCTGAGTGATATTTATTTCAAGAACATTAGAGGAACATCTTCCTCTAAAGTGGCTGTGGCATTAGAATGCAGCAAGGGATTCCCATGTCAGAATGTGAACCTTGAAAATGTTCACTTGGATCTTTCATCAGGAGAAAATCATCCATCTTCTACTTGCAAATATGTTAGAGCCAGGTATATTGGCACCCAAATCCCACCCCCTTGTGCTTAG

Coding sequence (CDS)

ATGTCTTTGAGAATAAAGGCTGTGGTGGATAAATTCGTGGAGGAGCTCAAGGAAGCTTTGGATGCAGATATTCAAGATCGAATCATGAAGGAGAGAGAGATGCAGAGTTACATTGAAGAGCGTGAACGTGAGGTTGCTGAACGTGAAGCTGCTTGGAAAGCTGAGCTCTCTCGTCGTGAGGCCGAAATTGCAAGACAAGAAGCAAGGTTGAAGATGGAAAAGGAAAATCTGGAAAAAGAGAAAAGTGTGCTAATGGGAACTGCATCAAATCAAGACAACCAAGATGGAGCTCTTGAAATTACTGCCTTCTTAGCAGCATGGAGGATGGCCTGTGACTCAGCTGGAGTTGTAACTTTCCTGATTCCAAAAGGAACCTATTTGGTTGGTCCAGTTATATTTTCTGGCCCTTGCAAAAACGTGTCATCTCTAACAGTTAAAATGGAGGGCTATTTGAAGGCATCAACAAACCTTTCGAAATATGGTTCTGGTGCAGGCTGGATTGAGTTCAGATGGATGGAGGGGCTAACCTTGAATGGAGGTGGAACCTTTGATGGTCGAGGCGCTGAGGCATGGCCATTCAACAACTGCCGCGATGACTACAATTGCAAACTCCTTCCTACTAACTTGAAATTTGTGGCTTTGAATAATACGGTTGTTCAACACATAACTTCGCTGAACAGCAAGTTCTTTCACCTGGCTTTAGTTCAATGCAAGAGGTTCGTAGGTAGCGAACTCAAGATTTCTGCTCCAGAAAATAGTCCCAACACCGATGGCATCCACATTGACCGAAGTTCTAATATCCATTTTTCTTTATCACATATTCAAACGGGTGACGACTGCATATCCATCGGACAAGGGAACTCTCAAGTCACAATCTCTAGCGTCAACTGTGGACCTGGCCATGGGATCAGTGTTGGAAGCTTGGGAAGATATCGAAATGAAGGAGACGTAAGCGGATTAGTAGTTAAAAATTGCAGCCTCACAGGTACCGCCAATGGGATCAGAATCAAGACATGGCCAAACTCTCCTGGTAGCAGCTCAGCCACAAACATGACATTTGAGAACATTACCATGAACAATGTGTCCAATCCAATTATCATTGATCAATCATACTGTCCATTCGGATTTTGTTCTTTCAAGGCACCATCTCTTGTGAAGCTGAGTGATATTTATTTCAAGAACATTAGAGGAACATCTTCCTCTAAAGTGGCTGTGGCATTAGAATGCAGCAAGGGATTCCCATGTCAGAATGTGAACCTTGAAAATGTTCACTTGGATCTTTCATCAGGAGAAAATCATCCATCTTCTACTTGCAAATATGTTAGAGCCAGGTATATTGGCACCCAAATCCCACCCCCTTGTGCTTAG

Protein sequence

MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEIARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEITAFLAAWRMACDSAGVVTFLIPKGTYLVGPVIFSGPCKNVSSLTVKMEGYLKASTNLSKYGSGAGWIEFRWMEGLTLNGGGTFDGRGAEAWPFNNCRDDYNCKLLPTNLKFVALNNTVVQHITSLNSKFFHLALVQCKRFVGSELKISAPENSPNTDGIHIDRSSNIHFSLSHIQTGDDCISIGQGNSQVTISSVNCGPGHGISVGSLGRYRNEGDVSGLVVKNCSLTGTANGIRIKTWPNSPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPSLVKLSDIYFKNIRGTSSSKVAVALECSKGFPCQNVNLENVHLDLSSGENHPSSTCKYVRARYIGTQIPPPCA

Homology

[Close]

BLAST of CsaV3_7G002090 vs. NCBI nr
Match: KGN43365.1 (hypothetical protein Csa_7G027810 [Cucumis sativus])

HSP 1 Score: 731.1 bits (1886), Expect = 2.3e-207
Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 0


Query: 102 AFLAAWRMACDSAGVVTFLIPKGTYLVGPVIFSGPCKNVSSLTVKMEGYLKASTNLSKYG 161
           AFLAAWRMACDSAGVVTFLIPKGTYLVGPVIFSGPCKNVSSLTVKMEGYLKASTNLSKYG
Sbjct: 86  AFLAAWRMACDSAGVVTFLIPKGTYLVGPVIFSGPCKNVSSLTVKMEGYLKASTNLSKYG 145

Query: 162 SGAGWIEFRWMEGLTLNGGGTFDGRGAEAWPFNNCRDDYNCKLLPTNLKFVALNNTVVQH 221
           SGAGWIEFRWMEGLTLNGGGTFDGRGAEAWPFNNCRDDYNCKLLPTNLKFVALNNTVVQH
Sbjct: 146 SGAGWIEFRWMEGLTLNGGGTFDGRGAEAWPFNNCRDDYNCKLLPTNLKFVALNNTVVQH 205

Query: 222 ITSLNSKFFHLALVQCKRFVGSELKISAPENSPNTDGIHIDRSSNIHFSLSHIQTGDDCI 281
           ITSLNSKFFHLALVQCKRFVGSELKISAPENSPNTDGIHIDRSSNIHFSLSHIQTGDDCI
Sbjct: 206 ITSLNSKFFHLALVQCKRFVGSELKISAPENSPNTDGIHIDRSSNIHFSLSHIQTGDDCI 265

Query: 282 SIGQGNSQVTISSVNCGPGHGISVGSLGRYRNEGDVSGLVVKNCSLTGTANGIRIKTWPN 341
           SIGQGNSQVTISSVNCGPGHGISVGSLGRYRNEGDVSGLVVKNCSLTGTANGIRIKTWPN
Sbjct: 266 SIGQGNSQVTISSVNCGPGHGISVGSLGRYRNEGDVSGLVVKNCSLTGTANGIRIKTWPN 325

Query: 342 SPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPSLVKLSDIYFKNIRGTSSS 401
           SPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPSLVKLSDIYFKNIRGTSSS
Sbjct: 326 SPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPSLVKLSDIYFKNIRGTSSS 385

Query: 402 KVAVALECSKGFPCQNVNLENVHLDLSSGENHPSSTCKYVRARYIGTQIPPPCA 456
           KVAVALECSKGFPCQNVNLENVHLDLSSGENHPSSTCKYVRARYIGTQIPPPCA
Sbjct: 386 KVAVALECSKGFPCQNVNLENVHLDLSSGENHPSSTCKYVRARYIGTQIPPPCA 439

[Close]

BLAST of CsaV3_7G002090 vs. NCBI nr
Match: XP_011659695.1 (PREDICTED: exopolygalacturonase, partial [Cucumis sativus])

HSP 1 Score: 731.1 bits (1886), Expect = 2.3e-207
Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 0


Query: 102 AFLAAWRMACDSAGVVTFLIPKGTYLVGPVIFSGPCKNVSSLTVKMEGYLKASTNLSKYG 161
           AFLAAWRMACDSAGVVTFLIPKGTYLVGPVIFSGPCKNVSSLTVKMEGYLKASTNLSKYG
Sbjct: 33  AFLAAWRMACDSAGVVTFLIPKGTYLVGPVIFSGPCKNVSSLTVKMEGYLKASTNLSKYG 92

Query: 162 SGAGWIEFRWMEGLTLNGGGTFDGRGAEAWPFNNCRDDYNCKLLPTNLKFVALNNTVVQH 221
           SGAGWIEFRWMEGLTLNGGGTFDGRGAEAWPFNNCRDDYNCKLLPTNLKFVALNNTVVQH
Sbjct: 93  SGAGWIEFRWMEGLTLNGGGTFDGRGAEAWPFNNCRDDYNCKLLPTNLKFVALNNTVVQH 152

Query: 222 ITSLNSKFFHLALVQCKRFVGSELKISAPENSPNTDGIHIDRSSNIHFSLSHIQTGDDCI 281
           ITSLNSKFFHLALVQCKRFVGSELKISAPENSPNTDGIHIDRSSNIHFSLSHIQTGDDCI
Sbjct: 153 ITSLNSKFFHLALVQCKRFVGSELKISAPENSPNTDGIHIDRSSNIHFSLSHIQTGDDCI 212

Query: 282 SIGQGNSQVTISSVNCGPGHGISVGSLGRYRNEGDVSGLVVKNCSLTGTANGIRIKTWPN 341
           SIGQGNSQVTISSVNCGPGHGISVGSLGRYRNEGDVSGLVVKNCSLTGTANGIRIKTWPN
Sbjct: 213 SIGQGNSQVTISSVNCGPGHGISVGSLGRYRNEGDVSGLVVKNCSLTGTANGIRIKTWPN 272

Query: 342 SPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPSLVKLSDIYFKNIRGTSSS 401
           SPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPSLVKLSDIYFKNIRGTSSS
Sbjct: 273 SPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPSLVKLSDIYFKNIRGTSSS 332

Query: 402 KVAVALECSKGFPCQNVNLENVHLDLSSGENHPSSTCKYVRARYIGTQIPPPCA 456
           KVAVALECSKGFPCQNVNLENVHLDLSSGENHPSSTCKYVRARYIGTQIPPPCA
Sbjct: 333 KVAVALECSKGFPCQNVNLENVHLDLSSGENHPSSTCKYVRARYIGTQIPPPCA 386

[Close]

BLAST of CsaV3_7G002090 vs. NCBI nr
Match: XP_008451195.1 (PREDICTED: exopolygalacturonase isoform X1 [Cucumis melo])

HSP 1 Score: 714.5 bits (1843), Expect = 2.2e-202
Identity = 343/354 (96.89%), Postives = 350/354 (98.87%), Query Frame = 0


Query: 102 AFLAAWRMACDSAGVVTFLIPKGTYLVGPVIFSGPCKNVSSLTVKMEGYLKASTNLSKYG 161
           AFLAAWR ACDSAGVVTFLIPKGTYLVGPV FSGPCKNVSSLTVKM+GYLKASTNLSKYG
Sbjct: 48  AFLAAWRTACDSAGVVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKGYLKASTNLSKYG 107

Query: 162 SGAGWIEFRWMEGLTLNGGGTFDGRGAEAWPFNNCRDDYNCKLLPTNLKFVALNNTVVQH 221
           SGAGWIEFRWMEGLTL GGGTFDGRG+EAWPFNNCRDDYNCKLLPTNLKFVALNNTVVQH
Sbjct: 108 SGAGWIEFRWMEGLTLTGGGTFDGRGSEAWPFNNCRDDYNCKLLPTNLKFVALNNTVVQH 167

Query: 222 ITSLNSKFFHLALVQCKRFVGSELKISAPENSPNTDGIHIDRSSNIHFSLSHIQTGDDCI 281
           ITSLNSKFFHLALVQCK F+GS+LKISAPENSPNTDGIHIDRSSN+HFSLSHIQTGDDCI
Sbjct: 168 ITSLNSKFFHLALVQCKGFIGSKLKISAPENSPNTDGIHIDRSSNVHFSLSHIQTGDDCI 227

Query: 282 SIGQGNSQVTISSVNCGPGHGISVGSLGRYRNEGDVSGLVVKNCSLTGTANGIRIKTWPN 341
           SIGQGNS+VTISS+NCGPGHGISVGSLGRYRNEGDVSGLVVKNCSLTGTANGIRIKTWPN
Sbjct: 228 SIGQGNSEVTISSINCGPGHGISVGSLGRYRNEGDVSGLVVKNCSLTGTANGIRIKTWPN 287

Query: 342 SPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPSLVKLSDIYFKNIRGTSSS 401
           SPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPSLVKLSDIYFKNIRGTSSS
Sbjct: 288 SPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPSLVKLSDIYFKNIRGTSSS 347

Query: 402 KVAVALECSKGFPCQNVNLENVHLDLSSGENHPSSTCKYVRARYIGTQIPPPCA 456
           KVAVALECSKGFPCQNVNLENVHLDLSSGENHPSSTCKYVRARYIGTQIPPPCA
Sbjct: 348 KVAVALECSKGFPCQNVNLENVHLDLSSGENHPSSTCKYVRARYIGTQIPPPCA 401

[Close]

BLAST of CsaV3_7G002090 vs. NCBI nr
Match: XP_008451196.1 (PREDICTED: exopolygalacturonase isoform X2 [Cucumis melo])

HSP 1 Score: 714.5 bits (1843), Expect = 2.2e-202
Identity = 343/354 (96.89%), Postives = 350/354 (98.87%), Query Frame = 0


Query: 102 AFLAAWRMACDSAGVVTFLIPKGTYLVGPVIFSGPCKNVSSLTVKMEGYLKASTNLSKYG 161
           AFLAAWR ACDSAGVVTFLIPKGTYLVGPV FSGPCKNVSSLTVKM+GYLKASTNLSKYG
Sbjct: 20  AFLAAWRTACDSAGVVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKGYLKASTNLSKYG 79

Query: 162 SGAGWIEFRWMEGLTLNGGGTFDGRGAEAWPFNNCRDDYNCKLLPTNLKFVALNNTVVQH 221
           SGAGWIEFRWMEGLTL GGGTFDGRG+EAWPFNNCRDDYNCKLLPTNLKFVALNNTVVQH
Sbjct: 80  SGAGWIEFRWMEGLTLTGGGTFDGRGSEAWPFNNCRDDYNCKLLPTNLKFVALNNTVVQH 139

Query: 222 ITSLNSKFFHLALVQCKRFVGSELKISAPENSPNTDGIHIDRSSNIHFSLSHIQTGDDCI 281
           ITSLNSKFFHLALVQCK F+GS+LKISAPENSPNTDGIHIDRSSN+HFSLSHIQTGDDCI
Sbjct: 140 ITSLNSKFFHLALVQCKGFIGSKLKISAPENSPNTDGIHIDRSSNVHFSLSHIQTGDDCI 199

Query: 282 SIGQGNSQVTISSVNCGPGHGISVGSLGRYRNEGDVSGLVVKNCSLTGTANGIRIKTWPN 341
           SIGQGNS+VTISS+NCGPGHGISVGSLGRYRNEGDVSGLVVKNCSLTGTANGIRIKTWPN
Sbjct: 200 SIGQGNSEVTISSINCGPGHGISVGSLGRYRNEGDVSGLVVKNCSLTGTANGIRIKTWPN 259

Query: 342 SPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPSLVKLSDIYFKNIRGTSSS 401
           SPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPSLVKLSDIYFKNIRGTSSS
Sbjct: 260 SPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPSLVKLSDIYFKNIRGTSSS 319

Query: 402 KVAVALECSKGFPCQNVNLENVHLDLSSGENHPSSTCKYVRARYIGTQIPPPCA 456
           KVAVALECSKGFPCQNVNLENVHLDLSSGENHPSSTCKYVRARYIGTQIPPPCA
Sbjct: 320 KVAVALECSKGFPCQNVNLENVHLDLSSGENHPSSTCKYVRARYIGTQIPPPCA 373

[Close]

BLAST of CsaV3_7G002090 vs. NCBI nr
Match: XP_023554538.1 (exopolygalacturonase isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 664.1 bits (1712), Expect = 3.5e-187
Identity = 320/354 (90.40%), Postives = 333/354 (94.07%), Query Frame = 0


Query: 102 AFLAAWRMACDSAGVVTFLIPKGTYLVGPVIFSGPCKNVSSLTVKMEGYLKASTNLSKYG 161
           AF   WRMAC SAGVVTFLIPKGTYLVGPV FSGPCKNVSSLTVKM+GYLKAST+LSKYG
Sbjct: 64  AFSETWRMACGSAGVVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKGYLKASTDLSKYG 123

Query: 162 SGAGWIEFRWMEGLTLNGGGTFDGRGAEAWPFNNCRDDYNCKLLPTNLKFVALNNTVVQH 221
           SGAGWIEFRWMEGLTL GGGTFDGRGAEAWPFNNC DD+NC LLPTNLKFVA+NNTVV+ 
Sbjct: 124 SGAGWIEFRWMEGLTLTGGGTFDGRGAEAWPFNNCLDDHNCNLLPTNLKFVAMNNTVVRR 183

Query: 222 ITSLNSKFFHLALVQCKRFVGSELKISAPENSPNTDGIHIDRSSNIHFSLSHIQTGDDCI 281
           ITSLNSKFFHLALVQCKRF GS LKISAP NSPNTDGIHIDRSSNIH S SHIQTGDDCI
Sbjct: 184 ITSLNSKFFHLALVQCKRFRGSNLKISAPANSPNTDGIHIDRSSNIHLSRSHIQTGDDCI 243

Query: 282 SIGQGNSQVTISSVNCGPGHGISVGSLGRYRNEGDVSGLVVKNCSLTGTANGIRIKTWPN 341
           SIGQGNSQVTI+ ++CGPGHGISVGSLGRY+NEGDVSGLVVKNCSLTGT NGIRIKTWPN
Sbjct: 244 SIGQGNSQVTITGIDCGPGHGISVGSLGRYQNEGDVSGLVVKNCSLTGTTNGIRIKTWPN 303

Query: 342 SPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPSLVKLSDIYFKNIRGTSSS 401
           SPGSSSATNMTF+N  MNNVSNPIIIDQSYCPF  CSFKAPSLVKLSDIYFKNI+GTSSS
Sbjct: 304 SPGSSSATNMTFKNFAMNNVSNPIIIDQSYCPFRSCSFKAPSLVKLSDIYFKNIKGTSSS 363

Query: 402 KVAVALECSKGFPCQNVNLENVHLDLSSGENHPSSTCKYVRARYIGTQIPPPCA 456
           KVAVALECSKGFPCQNVNLENVHL LSSG+NHPSSTCKYVRA+YIGTQIPPPCA
Sbjct: 364 KVAVALECSKGFPCQNVNLENVHLLLSSGQNHPSSTCKYVRAKYIGTQIPPPCA 417

[Close]

BLAST of CsaV3_7G002090 vs. TAIR10
Match: AT4G18180.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 507.3 bits (1305), Expect = 9.9e-144
Identity = 248/365 (67.95%), Postives = 291/365 (79.73%), Query Frame = 0


Query: 102 AFLAAWRMAC-DSAGVVTFLIPKGTYLVGPVIFSGPCKNVSSLTVKMEGYLKASTNLSKY 161
           AF+AAW  AC  S+  V  +IP+G + VG + FSGPC NVS+LTV+    +KAST+LSKY
Sbjct: 53  AFVAAWDKACKSSSSSVNLIIPRGEFSVGSLRFSGPCTNVSNLTVR----VKASTDLSKY 112

Query: 162 GSGAGWIEFRWMEGLTLNGGGTFDGRGAEAWPFNNCRDDYNCKLLPTNLKFVALNNTVVQ 221
            SG GWI+F W+ GLTL GGGTFDG+GA AWPFNNC  D NCKLLPT+LKFV +N TVV+
Sbjct: 113 RSGGGWIQFGWINGLTLTGGGTFDGQGALAWPFNNCTSDSNCKLLPTSLKFVGMNRTVVR 172

Query: 222 HITSLNSKFFHLALVQCKRFVGSELKISAPENSPNTDGIHIDRSSNIHFSLSHIQTGDDC 281
            I+S+NSKFFH+ALV+C+ F G+ L I+AP +SPNTDGIHI+RSSN++FS SHI TGDDC
Sbjct: 173 RISSVNSKFFHIALVECRDFKGTRLNITAPSDSPNTDGIHIERSSNVYFSRSHIATGDDC 232

Query: 282 ISIGQGNSQVTISSVNCGPGHGISVGSLGRYRNEGDVSGLVVKNCSLTGTANGIRIKTWP 341
           +SIGQGNSQ+TI+S+ CGPGHGISVGSLGRY NE DV+GLVVK+C ++GT NGIRIKTW 
Sbjct: 233 VSIGQGNSQITITSIKCGPGHGISVGSLGRYPNEKDVNGLVVKDCKISGTTNGIRIKTWA 292

Query: 342 NSPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPSLVKLSDIYFKNIRGTSS 401
           NSPG S+ATNMTFENI MNNV+NPIIIDQSYCPF  C    PS V+LS+IYFKNIRGTSS
Sbjct: 293 NSPGLSAATNMTFENIIMNNVTNPIIIDQSYCPFSSCISNVPSKVELSEIYFKNIRGTSS 352

Query: 402 SKVAVALECSKGFPCQNVNLENVHLDLSS-----------GENHPSSTCKYVRARYIGTQ 455
           S VAV L CS+G PC+ V LENVHLDLSS           G    SS+C+ VRA YIGTQ
Sbjct: 353 SLVAVQLHCSRGMPCKKVYLENVHLDLSSSDGGRKQSSNRGNEAVSSSCRNVRANYIGTQ 412

[Close]

BLAST of CsaV3_7G002090 vs. TAIR10
Match: AT5G48140.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 333.2 bits (853), Expect = 2.5e-91
Identity = 162/366 (44.26%), Postives = 233/366 (63.66%), Query Frame = 0


Query: 90  NQDNQDGALEITAFLAAWRMACDSAGVVTFLIPKGTYLVGPVIFSGPCKNVSSLTVKMEG 149
           N ++  G+    A L A+  AC      T +IPKG Y +G ++  GPCK  + + + + G
Sbjct: 27  NINSPPGSDITNALLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMGPCK--APIRIALLG 86

Query: 150 YLKASTNLSKYGSGAGWIEFRWMEGLTLNGGGTFDGRGAEAWPFNNCRDDYNCKLLPTNL 209
            +KA  N +       W+ FR + G  LNGGG FDG G  AW  NNC   +NCK LP ++
Sbjct: 87  TVKADGNAN---GKEKWVAFRNINGFKLNGGGVFDGEGNAAWRVNNCHKTFNCKKLPISI 146

Query: 210 KFVALNNTVVQHITSLNSKFFHLALVQCKRFVGSELKISAPENSPNTDGIHIDRSSNIHF 269
           +F  + +  ++ ITSL++K FH+ ++  K     ++KI AP  SPNTDGIH+ RS  I  
Sbjct: 147 RFDFVTDAKIRGITSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDGIKI 206

Query: 270 SLSHIQTGDDCISIGQGNSQVTISSVNCGPGHGISVGSLGRYRNEGDVSGLVVKNCSLTG 329
             S I TGDDC+S+G G   + +  V CGPGHGIS+GSLGRY +E +VSG+ + NC+L  
Sbjct: 207 INSFISTGDDCVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCTLQE 266

Query: 330 TANGIRIKTWPNSPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPSLVKLSD 389
           T NG+RIKTWP++  +++A+++ FENI + NVSNPI+IDQ YCP+  C+ + PS +KL++
Sbjct: 267 TDNGLRIKTWPSAACTTTASDIHFENILLKNVSNPILIDQEYCPWNQCNKQKPSTIKLAN 326

Query: 390 IYFKNIRGTSSSKVAVALECSKGFPCQNVNLENVHLDLSSGENHPSSTCKYVRARYIGTQ 449
           I FK IRGTS +K AV L CSKG+PCQNV + +V++  +  +   +  C  V  + +GTQ
Sbjct: 327 ISFKKIRGTSGNKDAVKLLCSKGYPCQNVEVGDVNIQYTGADGPATFQCSNVSPKLVGTQ 386

Query: 450 IPPPCA 456
           IP  C+
Sbjct: 387 IPKACS 387

[Close]

BLAST of CsaV3_7G002090 vs. TAIR10
Match: AT3G14040.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 331.3 bits (848), Expect = 9.7e-91
Identity = 164/354 (46.33%), Postives = 222/354 (62.71%), Query Frame = 0


Query: 102 AFLAAWRMACDSAGVVTFLIPKGTYLVGPVIFSGPCKNVSSLTVKMEGYLKASTNLSKYG 161
           AF AAW+ AC +   +T  +PKG YLV  + F GPCK    +T+++ G  KA   +    
Sbjct: 89  AFAAAWKEACAAGSTIT--VPKGEYLVESLEFKGPCK--GPVTLELNGNFKAPATVKTTK 148

Query: 162 SGAGWIEFRWMEGLTLNGG-GTFDGRGAEAWPFNNCRDDYNCKLLPTNLKFVALNNTVVQ 221
             AGWI+F  +   TLNG    FDG+G+ AW  N+C     C  LP N++F  L N+ + 
Sbjct: 149 PHAGWIDFENLADFTLNGNKAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKIN 208

Query: 222 HITSLNSKFFHLALVQCKRFVGSELKISAPENSPNTDGIHIDRSSNIHFSLSHIQTGDDC 281
            ITS NSK FH+ ++ CK    +++ I AP  S NTDGIHI RS+ ++   + I+TGDDC
Sbjct: 209 SITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDC 268

Query: 282 ISIGQGNSQVTISSVNCGPGHGISVGSLGRYRNEGDVSGLVVKNCSLTGTANGIRIKTWP 341
           +SIG G   + + +V CGPGHGIS+GSLGRY NE  V G+ V+ C +  T NG+RIKTWP
Sbjct: 269 VSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWP 328

Query: 342 NSPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPSLVKLSDIYFKNIRGTSS 401
            SP    A+N+ FE+ITM+NVS P++IDQ YCP+G C    PS VKLSD+  KNI+GTS+
Sbjct: 329 GSP-PGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKLSDVTIKNIKGTSA 388

Query: 402 SKVAVALECSKGFPCQNVNLENVHLDLSSGENHPSSTCKYVRARYIGTQIPPPC 455
           +KVAV L CSKG PC N+ L +++L  +  E    S C  ++    G  +P  C
Sbjct: 389 TKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLVPAAC 437

[Close]

BLAST of CsaV3_7G002090 vs. TAIR10
Match: AT3G07850.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 328.9 bits (842), Expect = 4.8e-90
Identity = 163/354 (46.05%), Postives = 221/354 (62.43%), Query Frame = 0


Query: 102 AFLAAWRMACDSAGVVTFLIPKGTYLVGPVIFSGPCKNVSSLTVKMEGYLKASTNLSKYG 161
           AF AAW+ AC +   +T  +PKG Y+V  + F GPCK    +T+++ G  KA   +    
Sbjct: 88  AFAAAWKEACAAGSTIT--VPKGEYMVESLEFKGPCK--GPVTLELNGNFKAPATVKTTK 147

Query: 162 SGAGWIEFRWMEGLTLNGG-GTFDGRGAEAWPFNNCRDDYNCKLLPTNLKFVALNNTVVQ 221
             AGWI+F  +   TLNG    FDG+G+ AW  N+C     C  LP N++F  L N+ + 
Sbjct: 148 PHAGWIDFENIADFTLNGNKAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKIN 207

Query: 222 HITSLNSKFFHLALVQCKRFVGSELKISAPENSPNTDGIHIDRSSNIHFSLSHIQTGDDC 281
            ITS NSK FH+ ++ CK    S++ I AP  S NTDGIHI RS+ ++   + I+TGDDC
Sbjct: 208 SITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDC 267

Query: 282 ISIGQGNSQVTISSVNCGPGHGISVGSLGRYRNEGDVSGLVVKNCSLTGTANGIRIKTWP 341
           +SIG G   + + +V CGPGHGIS+GSLGRY NE  V G+ V+ C +  T NG+RIKTWP
Sbjct: 268 VSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWP 327

Query: 342 NSPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPSLVKLSDIYFKNIRGTSS 401
            SP    A+N+ FE+ITM+NVS P++IDQ YCP+G C    PS VKLSD+  K I+GTS+
Sbjct: 328 GSP-PGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSQVKLSDVTIKGIKGTSA 387

Query: 402 SKVAVALECSKGFPCQNVNLENVHLDLSSGENHPSSTCKYVRARYIGTQIPPPC 455
           +KVAV L CSKG PC N+ L +++L  +  E    S C  ++    G  +P  C
Sbjct: 388 TKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLVPAAC 436

[Close]

BLAST of CsaV3_7G002090 vs. TAIR10
Match: AT3G07830.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 325.9 bits (834), Expect = 4.1e-89
Identity = 161/353 (45.61%), Postives = 229/353 (64.87%), Query Frame = 0


Query: 102 AFLAAWRMACDSAGVVTFLIPKGTYLVGPVIFSGPCKNVSSLTVKMEGYLKASTNLSKYG 161
           A L A+  AC S      +IPKG + +G ++ SGPCK  S + + + G + A  N S +G
Sbjct: 39  ALLRAFTTACQSPTPRKVVIPKGQFKLGEIMMSGPCK--SPVEITLLGTVLADGN-SIHG 98

Query: 162 SGAGWIEFRWMEGLTLNGGGTFDGRGAEAWPFNNCRDDYNCKLLPTNLKFVALNNTVVQH 221
               W+ F+ M+G  LNGGGTFDG G  AW  NNC   + CK LP +++F  + N  ++ 
Sbjct: 99  K-EKWVVFQRMDGFRLNGGGTFDGEGNAAWRVNNCHKTFECKKLPISIRFDFVTNAEIRD 158

Query: 222 ITSLNSKFFHLALVQCKRFVGSELKISAPENSPNTDGIHIDRSSNIHFSLSHIQTGDDCI 281
           I+S+++K FH+ ++  K      +KI AP  SPNTDGIH+ RS  +    S I TGDDC+
Sbjct: 159 ISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGVSIINSRISTGDDCV 218

Query: 282 SIGQGNSQVTISSVNCGPGHGISVGSLGRYRNEGDVSGLVVKNCSLTGTANGIRIKTWPN 341
           S+G G   + + +V CGPGHGISVGSLGRY +E DVSG+ V NC+L  T NG+RIKTWP+
Sbjct: 219 SVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTLQETDNGLRIKTWPS 278

Query: 342 SPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPSLVKLSDIYFKNIRGTSSS 401
           +  S++A+N+ FENI + NVSNPI+IDQ YCP+  C+ +  S +KL++I F+ IRGTS +
Sbjct: 279 AACSTTASNIHFENIILRNVSNPILIDQEYCPWNQCNKQKSSSIKLANISFRRIRGTSGN 338

Query: 402 KVAVALECSKGFPCQNVNLENVHLDLSSGENHPSSTCKYVRARYIGTQIPPPC 455
           K AV L CSKG+PC+NV + ++++  +  +   +  C  VR + +GTQ P  C
Sbjct: 339 KDAVKLLCSKGYPCENVQVGDINIQYTGADGPATFMCSNVRPKLVGTQFPKAC 387

[Close]

BLAST of CsaV3_7G002090 vs. Swiss-Prot
Match: sp|Q6H9K0|PGLR2_PLAAC (Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 9.2e-99
Identity = 177/363 (48.76%), Postives = 243/363 (66.94%), Query Frame = 0


Query: 90  NQDNQDGALEIT-AFLAAWRMACDSAGVVTFLIPKGTYLVGPVIFSGPCKNVSSLTVKME 149
           N     GA +I+ A + AW+ AC S G  T LIPKG Y +G V   GPCK  S +  +++
Sbjct: 13  NDYGAKGAGDISQAVMKAWKAACASQGPSTVLIPKGNYNMGEVAMQGPCKG-SKIGFQID 72

Query: 150 GYLKASTNLSKYGSGAGWIEFRWMEGLTLNGGGTFDGRGAEAWPFNNCRDDYNCKLLPTN 209
           G +KA  + SK+ S  GW+ F  ++GLT++G GT DG+G  AW  NNC  + NCK    N
Sbjct: 73  GVVKAPADPSKFKSD-GWVSFYRIDGLTVSGTGTLDGQGQTAWAKNNCDKNPNCKHAAMN 132

Query: 210 LKFVALNNTVVQHITSLNSKFFHLALVQCKRFVGSELKISAPENSPNTDGIHIDRSSNIH 269
           L+F  L + +V+ ITSLNSK FH+ +++C+      + ++AP  S NTDGIH+  S  + 
Sbjct: 133 LRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHVGISKGVT 192

Query: 270 FSLSHIQTGDDCISIGQGNSQVTISSVNCGPGHGISVGSLGRYRNEGDVSGLVVKNCSLT 329
            + + I TGDDCISIG G+  VTI+ VNCGPGHGIS+GSLGRY NE +V G+ VK C+ +
Sbjct: 193 ITNTKIATGDDCISIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRGITVKGCTFS 252

Query: 330 GTANGIRIKTWPNSPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPSLVKLS 389
           GT NG+R+KTWPNSP   +AT++TF+++TMNNV NP+I+DQ YCP+G CS +APS +KLS
Sbjct: 253 GTMNGVRVKTWPNSP-PGAATDLTFQDLTMNNVQNPVILDQEYCPYGQCSRQAPSRIKLS 312

Query: 390 DIYFKNIRGTSSSKVAVALECSKGFPCQNVNLENVHLDLSSGENHPSSTCKYVRARYIGT 449
           +I F NIRGTS+ KVAV + CS G PC N+ +  ++L         +STC  V+  + G 
Sbjct: 313 NINFNNIRGTSTGKVAVVIACSHGMPCSNMKIGEINLSYRGAGGPATSTCSNVKPTFSGK 372

Query: 450 QIP 452
           Q+P
Sbjct: 373 QVP 372

[Close]

BLAST of CsaV3_7G002090 vs. Swiss-Prot
Match: sp|P24548|PGLR_OENOR (Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 1.3e-92
Identity = 172/356 (48.31%), Postives = 235/356 (66.01%), Query Frame = 0


Query: 102 AFLAAWRMACDSAGVVTFLIPKGTYLVGPVIFSGPCKNVSSLTVKMEGYLKASTNLSKYG 161
           A   AW+ AC SA   T L+PKG + VG +   GPCK  SS+ ++++G LKA  + SK  
Sbjct: 5   ALTTAWKEACASASPSTILVPKGNFAVGLITLEGPCK--SSIGLQLQGTLKAPADPSKI- 64

Query: 162 SGAGWIEFRWMEGLTLNGGGTFDGRGAEAWPFNNC-RDDYNCKLLPTNLKFVALNNTVVQ 221
            G GWI    ++ LT+ GGG FDG+G  AW  N+C ++   CK L  NL+  A+ N++++
Sbjct: 65  KGLGWINLNKIDLLTIFGGGVFDGQGKSAWVQNDCHKNGPICKTLSMNLRLYAVTNSILR 124

Query: 222 HITSLNSKFFHLALVQCKRFVGSELKISAPENSPNTDGIHIDRSSNIHFSLSHIQTGDDC 281
            +T+L+SK FH+ ++ CK       KISA E S NTDGIHI RS  ++   + I+TGDDC
Sbjct: 125 DVTTLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGDDC 184

Query: 282 ISIGQGNSQVTISSVNCGPGHGISVGSLGRYRNEGDVSGLVVKNCSLTGTANGIRIKTWP 341
           IS+G G+  + I+++ CGPGHGISVGSLGRY+NE  V G+ VKNC++TG+ NG+RIKTWP
Sbjct: 185 ISLGDGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCTITGSQNGVRIKTWP 244

Query: 342 NS-PGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPSLVKLSDIYFKNIRGTS 401
            S PG   A+ M F++ITMN+V  PI+IDQ YCP+  C+ + PS VKLS I FKNI+GTS
Sbjct: 245 KSEPG--EASEMHFQDITMNSVGTPILIDQGYCPYNQCTAEVPSSVKLSKISFKNIKGTS 304

Query: 402 SSKVAVALECSKGFPCQNVNLENVHLDLSSGENHPSSTCKYVRARYIGTQIPPPCA 456
           ++K AV L CSK FPC  V L ++ L  S      +S C+ ++    G QIP  C+
Sbjct: 305 TTKEAVKLVCSKSFPCNGVELADIDLTYSGKGGPATSVCENIKPTIKGKQIPAICS 355

[Close]

BLAST of CsaV3_7G002090 vs. Swiss-Prot
Match: sp|P49063|PGLR2_ARATH (Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana OX=3702 GN=At3g07850 PE=2 SV=2)

HSP 1 Score: 328.9 bits (842), Expect = 8.7e-89
Identity = 163/354 (46.05%), Postives = 221/354 (62.43%), Query Frame = 0


Query: 102 AFLAAWRMACDSAGVVTFLIPKGTYLVGPVIFSGPCKNVSSLTVKMEGYLKASTNLSKYG 161
           AF AAW+ AC +   +T  +PKG Y+V  + F GPCK    +T+++ G  KA   +    
Sbjct: 88  AFAAAWKEACAAGSTIT--VPKGEYMVESLEFKGPCK--GPVTLELNGNFKAPATVKTTK 147

Query: 162 SGAGWIEFRWMEGLTLNGG-GTFDGRGAEAWPFNNCRDDYNCKLLPTNLKFVALNNTVVQ 221
             AGWI+F  +   TLNG    FDG+G+ AW  N+C     C  LP N++F  L N+ + 
Sbjct: 148 PHAGWIDFENIADFTLNGNKAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKIN 207

Query: 222 HITSLNSKFFHLALVQCKRFVGSELKISAPENSPNTDGIHIDRSSNIHFSLSHIQTGDDC 281
            ITS NSK FH+ ++ CK    S++ I AP  S NTDGIHI RS+ ++   + I+TGDDC
Sbjct: 208 SITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDC 267

Query: 282 ISIGQGNSQVTISSVNCGPGHGISVGSLGRYRNEGDVSGLVVKNCSLTGTANGIRIKTWP 341
           +SIG G   + + +V CGPGHGIS+GSLGRY NE  V G+ V+ C +  T NG+RIKTWP
Sbjct: 268 VSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWP 327

Query: 342 NSPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPSLVKLSDIYFKNIRGTSS 401
            SP    A+N+ FE+ITM+NVS P++IDQ YCP+G C    PS VKLSD+  K I+GTS+
Sbjct: 328 GSP-PGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSQVKLSDVTIKGIKGTSA 387

Query: 402 SKVAVALECSKGFPCQNVNLENVHLDLSSGENHPSSTCKYVRARYIGTQIPPPC 455
           +KVAV L CSKG PC N+ L +++L  +  E    S C  ++    G  +P  C
Sbjct: 388 TKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLVPAAC 436

[Close]

BLAST of CsaV3_7G002090 vs. Swiss-Prot
Match: sp|P35337|PGLR_BRANA (Polygalacturonase OS=Brassica napus OX=3708 PE=2 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 1.8e-86
Identity = 163/371 (43.94%), Postives = 225/371 (60.65%), Query Frame = 0


Query: 87  TASNQDNQDGALEITAFLAAWRMACDSAGVVTFLIPKGTYLVGPVIFSGPCKNVSSLTVK 146
           TA    N D      A L A+  AC +      LIPKG + +G  + +GPCK  S +   
Sbjct: 26  TAGGPPNSD---ITAAVLKAFTSACQAPAPSQVLIPKGDFKLGETVMTGPCK--SPIEFT 85

Query: 147 MEGYLKASTNLSKYGSGAG---WIEFRWMEGLTLNGGGTFDGRGAEAWPFNNCRDDYNCK 206
           ++G +K        GS  G   W+ F  + G  LNGGGTFDG G  AW  NNC   + CK
Sbjct: 86  LQGNVKTDG-----GSTQGKDRWVVFEKINGFKLNGGGTFDGEGNAAWKANNCHKTFECK 145

Query: 207 LLPTNLKFVALNNTVVQHITSLNSKFFHLALVQCKRFVGSELKISAPENSPNTDGIHIDR 266
            LP +++F  ++N  ++ +TSL++K FH  ++  K      +KI AP  SPNTDGIH+ R
Sbjct: 146 KLPISVRFDFVDNAEIKDVTSLDAKNFHFNVISGKNMTFDNIKIIAPAESPNTDGIHLGR 205

Query: 267 SSNIHFSLSHIQTGDDCISIGQGNSQVTISSVNCGPGHGISVGSLGRYRNEGDVSGLVVK 326
              +    + I TGDDCIS+G G   + I  V CGPGHGISVGSLGRY  E DV+ + VK
Sbjct: 206 CEGVKILNTKIATGDDCISVGDGMKNLLIEKVVCGPGHGISVGSLGRYGWEQDVTDITVK 265

Query: 327 NCSLTGTANGIRIKTWPNSPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPS 386
           NC+L GT+NG+RIKTWP++  +++A  + FE+I +N VSNPI+IDQ YCP+  C+   PS
Sbjct: 266 NCTLEGTSNGLRIKTWPSAACTTTAAGIHFEDIILNKVSNPILIDQEYCPWNQCNKNKPS 325

Query: 387 LVKLSDIYFKNIRGTSSSKVAVALECSKGFPCQNVNLENVHLDLSSGENHPSSTCKYVRA 446
            +KL DI F+NIRGTS +K AV L CSKG PC+NV + +++++ +  +  P+  C  V  
Sbjct: 326 TIKLVDITFRNIRGTSENKDAVKLLCSKGHPCENVEIGDINIEYTGPDGPPTFECTNVTP 385

Query: 447 RYIGTQIPPPC 455
           + +G Q P  C
Sbjct: 386 KLVGAQNPKAC 386

[Close]

BLAST of CsaV3_7G002090 vs. Swiss-Prot
Match: sp|Q39766|PGLR_GOSBA (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 4.2e-83
Identity = 159/362 (43.92%), Postives = 223/362 (61.60%), Query Frame = 0


Query: 95  DGALEIT-AFLAAWRMACDSAGVVTFLIPKGTYLVGPVIFSGPCKNVSSLTVKMEGYLKA 154
           DG  +++  FL AW+ AC S    T +IPKGTYL+  V   GPCK  + + + ++G ++A
Sbjct: 40  DGKTDLSKPFLDAWKEACASVTPSTVVIPKGTYLLSKVNLEGPCK--APIEINVQGTIQA 99

Query: 155 STNLSKYGSGAGWIEFRWMEGLTLNGGGTFDGRGAEAWPFNNCRDDYNCKLLPTNLKFVA 214
             + S +     W+ F  +E   + GGG FDG+G+ A+  N C +      LP N++F  
Sbjct: 100 PADPSAF-KDPNWVRFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLPVNIRFDF 159

Query: 215 LNNTVVQHITSLNSKFFHLALVQCKRFVGSELKISAPENSPNTDGIHIDRSSNIHFSLSH 274
           + N ++Q ITS +SK FH+ +  CK      LKI AP+ SPNTDGIH+ +S  ++   S 
Sbjct: 160 VTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASD 219

Query: 275 IQTGDDCISIGQGNSQVTISSVNCGPGHGISVGSLGRYRNEGDVSGLVVKNCSLTGTANG 334
           I+TGDDCISIG G   + I  + CGPGHGIS+GSLG+++NE  V G+ + NC++T T+NG
Sbjct: 220 IKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNG 279

Query: 335 IRIKTWPNSPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPSLVKLSDIYFK 394
            RIKTWP   G  + + + FE+ITMNNVS+PI+IDQ YCP+  C     S VKLS+I FK
Sbjct: 280 ARIKTWPGEHG-GAVSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLSNISFK 339

Query: 395 NIRGTSSSKVAVALECSKGFPCQNVNLENVHLDLSSGENHPSSTCKYVRARYIGTQIPPP 454
           NIRGTS+   A+   CS   PCQNV L ++ +   +G    +S C  V+   IG   P P
Sbjct: 340 NIRGTSALPEAIKFICSGSSPCQNVELADIDIQ-HNGAEPATSQCLNVKPITIGKLNPIP 396

Query: 455 CA 456
           C+
Sbjct: 400 CS 396

[Close]

BLAST of CsaV3_7G002090 vs. TrEMBL
Match: tr|A0A0A0K0Z1|A0A0A0K0Z1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G027810 PE=3 SV=1)

HSP 1 Score: 731.1 bits (1886), Expect = 1.5e-207
Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 0


Query: 102 AFLAAWRMACDSAGVVTFLIPKGTYLVGPVIFSGPCKNVSSLTVKMEGYLKASTNLSKYG 161
           AFLAAWRMACDSAGVVTFLIPKGTYLVGPVIFSGPCKNVSSLTVKMEGYLKASTNLSKYG
Sbjct: 86  AFLAAWRMACDSAGVVTFLIPKGTYLVGPVIFSGPCKNVSSLTVKMEGYLKASTNLSKYG 145

Query: 162 SGAGWIEFRWMEGLTLNGGGTFDGRGAEAWPFNNCRDDYNCKLLPTNLKFVALNNTVVQH 221
           SGAGWIEFRWMEGLTLNGGGTFDGRGAEAWPFNNCRDDYNCKLLPTNLKFVALNNTVVQH
Sbjct: 146 SGAGWIEFRWMEGLTLNGGGTFDGRGAEAWPFNNCRDDYNCKLLPTNLKFVALNNTVVQH 205

Query: 222 ITSLNSKFFHLALVQCKRFVGSELKISAPENSPNTDGIHIDRSSNIHFSLSHIQTGDDCI 281
           ITSLNSKFFHLALVQCKRFVGSELKISAPENSPNTDGIHIDRSSNIHFSLSHIQTGDDCI
Sbjct: 206 ITSLNSKFFHLALVQCKRFVGSELKISAPENSPNTDGIHIDRSSNIHFSLSHIQTGDDCI 265

Query: 282 SIGQGNSQVTISSVNCGPGHGISVGSLGRYRNEGDVSGLVVKNCSLTGTANGIRIKTWPN 341
           SIGQGNSQVTISSVNCGPGHGISVGSLGRYRNEGDVSGLVVKNCSLTGTANGIRIKTWPN
Sbjct: 266 SIGQGNSQVTISSVNCGPGHGISVGSLGRYRNEGDVSGLVVKNCSLTGTANGIRIKTWPN 325

Query: 342 SPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPSLVKLSDIYFKNIRGTSSS 401
           SPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPSLVKLSDIYFKNIRGTSSS
Sbjct: 326 SPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPSLVKLSDIYFKNIRGTSSS 385

Query: 402 KVAVALECSKGFPCQNVNLENVHLDLSSGENHPSSTCKYVRARYIGTQIPPPCA 456
           KVAVALECSKGFPCQNVNLENVHLDLSSGENHPSSTCKYVRARYIGTQIPPPCA
Sbjct: 386 KVAVALECSKGFPCQNVNLENVHLDLSSGENHPSSTCKYVRARYIGTQIPPPCA 439

[Close]

BLAST of CsaV3_7G002090 vs. TrEMBL
Match: tr|A0A1S3BRP5|A0A1S3BRP5_CUCME (exopolygalacturonase isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492566 PE=3 SV=1)

HSP 1 Score: 714.5 bits (1843), Expect = 1.5e-202
Identity = 343/354 (96.89%), Postives = 350/354 (98.87%), Query Frame = 0


Query: 102 AFLAAWRMACDSAGVVTFLIPKGTYLVGPVIFSGPCKNVSSLTVKMEGYLKASTNLSKYG 161
           AFLAAWR ACDSAGVVTFLIPKGTYLVGPV FSGPCKNVSSLTVKM+GYLKASTNLSKYG
Sbjct: 20  AFLAAWRTACDSAGVVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKGYLKASTNLSKYG 79

Query: 162 SGAGWIEFRWMEGLTLNGGGTFDGRGAEAWPFNNCRDDYNCKLLPTNLKFVALNNTVVQH 221
           SGAGWIEFRWMEGLTL GGGTFDGRG+EAWPFNNCRDDYNCKLLPTNLKFVALNNTVVQH
Sbjct: 80  SGAGWIEFRWMEGLTLTGGGTFDGRGSEAWPFNNCRDDYNCKLLPTNLKFVALNNTVVQH 139

Query: 222 ITSLNSKFFHLALVQCKRFVGSELKISAPENSPNTDGIHIDRSSNIHFSLSHIQTGDDCI 281
           ITSLNSKFFHLALVQCK F+GS+LKISAPENSPNTDGIHIDRSSN+HFSLSHIQTGDDCI
Sbjct: 140 ITSLNSKFFHLALVQCKGFIGSKLKISAPENSPNTDGIHIDRSSNVHFSLSHIQTGDDCI 199

Query: 282 SIGQGNSQVTISSVNCGPGHGISVGSLGRYRNEGDVSGLVVKNCSLTGTANGIRIKTWPN 341
           SIGQGNS+VTISS+NCGPGHGISVGSLGRYRNEGDVSGLVVKNCSLTGTANGIRIKTWPN
Sbjct: 200 SIGQGNSEVTISSINCGPGHGISVGSLGRYRNEGDVSGLVVKNCSLTGTANGIRIKTWPN 259

Query: 342 SPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPSLVKLSDIYFKNIRGTSSS 401
           SPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPSLVKLSDIYFKNIRGTSSS
Sbjct: 260 SPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPSLVKLSDIYFKNIRGTSSS 319

Query: 402 KVAVALECSKGFPCQNVNLENVHLDLSSGENHPSSTCKYVRARYIGTQIPPPCA 456
           KVAVALECSKGFPCQNVNLENVHLDLSSGENHPSSTCKYVRARYIGTQIPPPCA
Sbjct: 320 KVAVALECSKGFPCQNVNLENVHLDLSSGENHPSSTCKYVRARYIGTQIPPPCA 373

[Close]

BLAST of CsaV3_7G002090 vs. TrEMBL
Match: tr|A0A1S3BQX3|A0A1S3BQX3_CUCME (exopolygalacturonase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492566 PE=3 SV=1)

HSP 1 Score: 714.5 bits (1843), Expect = 1.5e-202
Identity = 343/354 (96.89%), Postives = 350/354 (98.87%), Query Frame = 0


Query: 102 AFLAAWRMACDSAGVVTFLIPKGTYLVGPVIFSGPCKNVSSLTVKMEGYLKASTNLSKYG 161
           AFLAAWR ACDSAGVVTFLIPKGTYLVGPV FSGPCKNVSSLTVKM+GYLKASTNLSKYG
Sbjct: 48  AFLAAWRTACDSAGVVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKGYLKASTNLSKYG 107

Query: 162 SGAGWIEFRWMEGLTLNGGGTFDGRGAEAWPFNNCRDDYNCKLLPTNLKFVALNNTVVQH 221
           SGAGWIEFRWMEGLTL GGGTFDGRG+EAWPFNNCRDDYNCKLLPTNLKFVALNNTVVQH
Sbjct: 108 SGAGWIEFRWMEGLTLTGGGTFDGRGSEAWPFNNCRDDYNCKLLPTNLKFVALNNTVVQH 167

Query: 222 ITSLNSKFFHLALVQCKRFVGSELKISAPENSPNTDGIHIDRSSNIHFSLSHIQTGDDCI 281
           ITSLNSKFFHLALVQCK F+GS+LKISAPENSPNTDGIHIDRSSN+HFSLSHIQTGDDCI
Sbjct: 168 ITSLNSKFFHLALVQCKGFIGSKLKISAPENSPNTDGIHIDRSSNVHFSLSHIQTGDDCI 227

Query: 282 SIGQGNSQVTISSVNCGPGHGISVGSLGRYRNEGDVSGLVVKNCSLTGTANGIRIKTWPN 341
           SIGQGNS+VTISS+NCGPGHGISVGSLGRYRNEGDVSGLVVKNCSLTGTANGIRIKTWPN
Sbjct: 228 SIGQGNSEVTISSINCGPGHGISVGSLGRYRNEGDVSGLVVKNCSLTGTANGIRIKTWPN 287

Query: 342 SPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPSLVKLSDIYFKNIRGTSSS 401
           SPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPSLVKLSDIYFKNIRGTSSS
Sbjct: 288 SPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPSLVKLSDIYFKNIRGTSSS 347

Query: 402 KVAVALECSKGFPCQNVNLENVHLDLSSGENHPSSTCKYVRARYIGTQIPPPCA 456
           KVAVALECSKGFPCQNVNLENVHLDLSSGENHPSSTCKYVRARYIGTQIPPPCA
Sbjct: 348 KVAVALECSKGFPCQNVNLENVHLDLSSGENHPSSTCKYVRARYIGTQIPPPCA 401

[Close]

BLAST of CsaV3_7G002090 vs. TrEMBL
Match: tr|A0A1R3K4Y7|A0A1R3K4Y7_COCAP (Glycoside hydrolase, family 28 OS=Corchorus capsularis OX=210143 GN=CCACVL1_02906 PE=3 SV=1)

HSP 1 Score: 655.2 bits (1689), Expect = 1.1e-184
Identity = 362/455 (79.56%), Postives = 408/455 (89.67%), Query Frame = 0


Query: 1   MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEERXXXXXXXXXXXXXXXXXXX 60
           MSLRIK VVDKFVEELKEAL+ADIQDRIMKEREMQSYIEERXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MSLRIKTVVDKFVEELKEALEADIQDRIMKEREMQSYIEERXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXLMGTASNQDNQDGALEITAFLAAWRMACDSAGVVTFL 120
           XXXXXXXXXXXXXXXXXXXXXX LMGTASNQDNQDGALEITAF AAW+ AC     V  +
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXVLMGTASNQDNQDGALEITAFKAAWKKACQGTSEVDIV 120

Query: 121 IPKGTYLVGPVIFSGPCKNVSSLTVKMEGYLKASTNLSKYGSGAGWIEFRWMEGLTLNGG 180
           IPKGTYL+GPV F+GPCKNVS +TV ++GYLKA+TNLSKYG  AGWIEF+W+EGL L GG
Sbjct: 121 IPKGTYLIGPVKFTGPCKNVSKITVHVKGYLKATTNLSKYGHNAGWIEFKWVEGLILTGG 180

Query: 181 GTFDGRGAEAWPFNNCRDDYNCKLLPTNLKFVALNNTVVQHITSLNSKFFHLALVQCKRF 240
           GTFDG+GA+AWP+NNC  D+NCKLLPTN+KFVA+N TVV+ ITS+NSKFFH+ALV+CK F
Sbjct: 181 GTFDGQGAKAWPYNNCPTDFNCKLLPTNVKFVAVNRTVVRSITSVNSKFFHIALVECKNF 240

Query: 241 VGSELKISAPENSPNTDGIHIDRSSNIHFSLSHIQTGDDCISIGQGNSQVTISSVNCGPG 300
            GS++KISAP +SPNTDGIHI+RSS +HFS S I TGDDCISIGQGNSQ+TI+S++CGPG
Sbjct: 241 KGSKIKISAPADSPNTDGIHIERSSGVHFSRSLIGTGDDCISIGQGNSQITITSISCGPG 300

Query: 301 HGISVGSLGRYRNEGDVSGLVVKNCSLTGTANGIRIKTWPNSPGSSSATNMTFENITMNN 360
           HGISVGSLGRYRNEGDVSGL+V++CS+TGT NGIRIKTW NSPG SSATNMTFENI MNN
Sbjct: 301 HGISVGSLGRYRNEGDVSGLLVRDCSMTGTTNGIRIKTWANSPGKSSATNMTFENINMNN 360

Query: 361 VSNPIIIDQSYCPFGFCSFKAPSLVKLSDIYFKNIRGTSSSKVAVALECSKGFPCQNVNL 420
           V+NPIIIDQ+YCPF  C+ K  S VKLSDIYFKNI+GTSSS VAVALECSKG PCQ++ L
Sbjct: 361 VTNPIIIDQAYCPFTSCTPKGTSQVKLSDIYFKNIKGTSSSAVAVALECSKGIPCQDIYL 420

Query: 421 ENVHLDLSSGENHPSSTCKYVRARYIGTQIPPPCA 456
           E+VHLDL+SG+   ++TCK VRA+Y GTQIPPPCA
Sbjct: 421 EDVHLDLASGKKQATATCKNVRAKYFGTQIPPPCA 455

[Close]

BLAST of CsaV3_7G002090 vs. TrEMBL
Match: tr|A0A2P4MVT4|A0A2P4MVT4_QUESU (Exopolygalacturonase OS=Quercus suber OX=58331 GN=CFP56_26326 PE=3 SV=1)

HSP 1 Score: 638.3 bits (1645), Expect = 1.4e-179
Identity = 367/515 (71.26%), Postives = 413/515 (80.19%), Query Frame = 0


Query: 1   MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEERXXXXXXXXXXXXXXXXXXX 60
           MSLRIK VVDKFVEELKEALDADIQDRIMKEREMQSYI+ERXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MSLRIKTVVDKFVEELKEALDADIQDRIMKEREMQSYIQERXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXLMGTASNQDNQDGALEIT------------------- 120
           XXXXXXXXXXXXXXXXXXXXXXXLMGTASNQDNQDGALEIT                   
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXLMGTASNQDNQDGALEITVSGEKYRCLREAVSVVKGI 120

Query: 121 -----------------------------------------AFLAAWRMACDSAGVVTFL 180
                                                    AF  AW+ AC+S+G V  L
Sbjct: 121 EFEAQKGRHVLHHKGRKRSALFDFDVMSFGARADGRTDDTRAFRTAWKKACESSGSVNLL 180

Query: 181 IPKGTYLVGPVIFSGPCKNVSSLTVKMEGYLKASTNLSKYGSGAGWIEFRWMEGLTLNGG 240
           IPKGTYL+G + F+GPC NVSSLTV ++GYLKA+T+LSKYG  AGW+EF W+EGLTL GG
Sbjct: 181 IPKGTYLIGHIEFTGPCNNVSSLTVHLKGYLKATTDLSKYGFSAGWVEFGWVEGLTLTGG 240

Query: 241 GTFDGRGAEAWPFNNCRDDYNCKLLPTNLKFVALNNTVVQHITSLNSKFFHLALVQCKRF 300
           GT DG+GA+AWP+N+C  D NCKLLPTN+KF+A+N TVV+ ITSLNSKFFH+ALV+CK F
Sbjct: 241 GTLDGQGAKAWPYNDCPTDSNCKLLPTNVKFMAMNKTVVRGITSLNSKFFHIALVECKNF 300

Query: 301 VGSELKISAPENSPNTDGIHIDRSSNIHFSLSHIQTGDDCISIGQGNSQVTISSVNCGPG 360
            GS++KISAP NSPNTDGIHI+RSS+++FS SHI TGDDCIS+GQGNSQVTI+ V CGPG
Sbjct: 301 KGSKIKISAPSNSPNTDGIHIERSSSVYFSGSHIGTGDDCISVGQGNSQVTITGVTCGPG 360

Query: 361 HGISVGSLGRYRNEGDVSGLVVKNCSLTGTANGIRIKTWPNSPGSSSATNMTFENITMNN 420
           HGISVGSLGRYRNEGDVSGL+V++C++TGT NGIRIKTW NSPGSS+ TNMTFENI MNN
Sbjct: 361 HGISVGSLGRYRNEGDVSGLLVRDCTMTGTTNGIRIKTWENSPGSSAVTNMTFENIVMNN 420

Query: 421 VSNPIIIDQSYCPFGFCSFKAPSLVKLSDIYFKNIRGTSSSKVAVALECSKGFPCQNVNL 456
           V+NPIIIDQ+YCPF  C+  APS VK+SDIYFKNIRGTSSSKVAVALECSKG PCQN+ L
Sbjct: 421 VTNPIIIDQTYCPFTSCTSMAPSRVKISDIYFKNIRGTSSSKVAVALECSKGMPCQNIYL 480

The following BLAST results are available for this feature:

BLAST of CsaV3_7G002090 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN43365.1	2.3e-207	100.00	hypothetical protein Csa_7G027810 [Cucumis sativus]	[more]
XP_011659695.1	2.3e-207	100.00	PREDICTED: exopolygalacturonase, partial [Cucumis sativus]	[more]
XP_008451195.1	2.2e-202	96.89	PREDICTED: exopolygalacturonase isoform X1 [Cucumis melo]	[more]
XP_008451196.1	2.2e-202	96.89	PREDICTED: exopolygalacturonase isoform X2 [Cucumis melo]	[more]
XP_023554538.1	3.5e-187	90.40	exopolygalacturonase isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_7G002090 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G18180.1	9.9e-144	67.95	Pectin lyase-like superfamily protein	[more]
AT5G48140.1	2.5e-91	44.26	Pectin lyase-like superfamily protein	[more]
AT3G14040.1	9.7e-91	46.33	Pectin lyase-like superfamily protein	[more]
AT3G07850.1	4.8e-90	46.05	Pectin lyase-like superfamily protein	[more]
AT3G07830.1	4.1e-89	45.61	Pectin lyase-like superfamily protein	[more]

BLAST of CsaV3_7G002090 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6H9K0\|PGLR2_PLAAC	9.2e-99	48.76	Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 S...	[more]
sp\|P24548\|PGLR_OENOR	1.3e-92	48.31	Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1	[more]
sp\|P49063\|PGLR2_ARATH	8.7e-89	46.05	Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana OX=3702 GN=At3g07850 ...	[more]
sp\|P35337\|PGLR_BRANA	1.8e-86	43.94	Polygalacturonase OS=Brassica napus OX=3708 PE=2 SV=1	[more]
sp\|Q39766\|PGLR_GOSBA	4.2e-83	43.92	Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1	[more]

BLAST of CsaV3_7G002090 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K0Z1\|A0A0A0K0Z1_CUCSA	1.5e-207	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G027810 PE=3 SV=1	[more]
tr\|A0A1S3BRP5\|A0A1S3BRP5_CUCME	1.5e-202	96.89	exopolygalacturonase isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492566 PE=3 SV=...	[more]
tr\|A0A1S3BQX3\|A0A1S3BQX3_CUCME	1.5e-202	96.89	exopolygalacturonase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492566 PE=3 SV=...	[more]
tr\|A0A1R3K4Y7\|A0A1R3K4Y7_COCAP	1.1e-184	79.56	Glycoside hydrolase, family 28 OS=Corchorus capsularis OX=210143 GN=CCACVL1_0290...	[more]
tr\|A0A2P4MVT4\|A0A2P4MVT4_QUESU	1.4e-179	71.26	Exopolygalacturonase OS=Quercus suber OX=58331 GN=CFP56_26326 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004650	polygalacturonase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR011050	Pectin_lyase_fold/virulence
IPR000743	Glyco_hydro_28
IPR012334	Pectin_lyas_fold
IPR006626	PbH1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0008150	biological_process
biological_process	GO:0071555	cell wall organization
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0004650	polygalacturonase activity
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016829	lyase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G002090.1	CsaV3_7G002090.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 56..83
None	No IPR available	PANTHER	PTHR31375:SF11	GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE PECTINASE FAMILY PROTEIN	coord: 99..455
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 99..455
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 264..285 e-value: 1700.0 score: 5.6 coord: 317..338 e-value: 8.1 score: 15.4 coord: 348..369 e-value: 1200.0 score: 6.6
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 92..449 e-value: 1.3E-103 score: 348.8
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 111..443 e-value: 2.8E-93 score: 312.4
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 294..307
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	SSF51126	Pectin lyase-like	coord: 100..454

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_7G002090	CSPI07G02230	Wild cucumber (PI 183967)	cpicucB415
CsaV3_7G002090	CSPI06G09590	Wild cucumber (PI 183967)	cpicucB375
CsaV3_7G002090	Cucsa.099870	Cucumber (Gy14) v1	cgycucB116
CsaV3_7G002090	Cucsa.119960	Cucumber (Gy14) v1	cgycucB160
CsaV3_7G002090	CmaCh11G013220	Cucurbita maxima (Rimu)	cmacucB0176
CsaV3_7G002090	CmaCh19G008100	Cucurbita maxima (Rimu)	cmacucB0638
CsaV3_7G002090	CmaCh02G003050	Cucurbita maxima (Rimu)	cmacucB0766
CsaV3_7G002090	CmoCh11G017990	Cucurbita moschata (Rifu)	cmocucB0155
CsaV3_7G002090	CmoCh19G008310	Cucurbita moschata (Rifu)	cmocucB0622
CsaV3_7G002090	Cp4.1LG15g06600	Cucurbita pepo (Zucchini)	cpecucB0322
CsaV3_7G002090	Cp4.1LG04g04330	Cucurbita pepo (Zucchini)	cpecucB0863
CsaV3_7G002090	CsGy7G001950	Cucumber (Gy14) v2	cgybcucB348
CsaV3_7G002090	Carg04109	Silver-seed gourd	carcucB0232
CsaV3_7G002090	Cla015729	Watermelon (97103) v1	cucwmB634
CsaV3_7G002090	MELO3C013484	Melon (DHL92) v3.5.1	cucmeB534
CsaV3_7G002090	MELO3C015698	Melon (DHL92) v3.5.1	cucmeB555
CsaV3_7G002090	ClCG02G010820	Watermelon (Charleston Gray)	cucwcgB576
CsaV3_7G002090	ClCG02G003280	Watermelon (Charleston Gray)	cucwcgB571
CsaV3_7G002090	Lsi11G013040	Bottle gourd (USVL1VR-Ls)	cuclsiB529
CsaV3_7G002090	Lsi10G000070	Bottle gourd (USVL1VR-Ls)	cuclsiB521
CsaV3_7G002090	MELO3C015698.2	Melon (DHL92) v3.6.1	cucmedB543
CsaV3_7G002090	MELO3C013484.2	Melon (DHL92) v3.6.1	cucmedB521
CsaV3_7G002090	Cla97C02G029830	Watermelon (97103) v2	cucwmbB549
CsaV3_7G002090	Bhi05G001340	Wax gourd	cucwgoB695

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CsaV3_7G002090	CsaV3_6G010030	Cucumber (Chinese Long) v3	cuccucB214

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_7G002090	Cucumber (Chinese Long) v3	cuccucB187
CsaV3_7G002090	Silver-seed gourd	carcucB0386
CsaV3_7G002090	Silver-seed gourd	carcucB1114
CsaV3_7G002090	Cucumber (Gy14) v2	cgybcucB196
CsaV3_7G002090	Cucumber (Gy14) v2	cgybcucB306
CsaV3_7G002090	Cucurbita maxima (Rimu)	cmacucB0687
CsaV3_7G002090	Cucurbita moschata (Rifu)	cmocucB0671
CsaV3_7G002090	Cucurbita pepo (Zucchini)	cpecucB0367