Cucsa.119960 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.119960
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	BnaC07g06350D protein
Location	scaffold00998 : 1912098 .. 1914774 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAATGTTGTGGAAAATAAAATTGTTGGTAGAGAAGTTCGTGGAAGAAGTGAAGGCAGAAGTGGAAGCTGATGTTGAAAATAGAATGAGAAAGGAGGAAGAAAAGCAACTCAGTGACCGGGAACGATGGAACGCCCAGCTATCACGCCGAGAGGTACTTTCAAATGCTCAACTCTTTTAATTCTCGATCGTTCCCTAAAATTAATCCCACGCCATAGTGTGTAACACAATCATGAAGATTATATTTCATACATAGTTTCCAAGGGCAAACCACCAAAAATTCCTTCCTTTTCTTCTTCAAAGCTTTTGATCGGAAAAACTAGATTGGATGTGCATTTTAAAATGTTCAGATTTTGTTCGAGATGAGTCATTAGACTGGTTGGGGCATAAACTATGCTATATATAATTGGTGGGAACTTTGAGTGTTATTTCAATCATTTTCCTTTTAATTTAGTGTTAAATAAGATTTGAATTTCAATTTGGGATATTTCTAAAATTCACCATTATTACTTACTAAATCTAGATTTTTGGAGTTTCACCAATCTTTTGATTGATATTTGAATTTTGGCACCAAATTGAAATTTTTGTGTATGAAAAATGCTTATTATAAGATGTTCTTAAGCAATTAAGTGTTGATTAGTACGTTATTCAGTCTTTTCCTTTAATTTGAAAAAACAATACTTCTAGATGTAAACGGACTCCATTCTTAACTCACCAAGAATCCATTCTTAACCTTTTGGAGTGCACTTAGGAGGGGCCTATAAGTTTGTATTCCACTGTTTCACACCTATCATAAAGATTCTTAGTTTAAAAAATTAGATATCTATTTACGATAGTCTTTCCTTTAATAAACTATAAAAGGTTTAAACAATCACTTCATGGTTGAATCGAATAATCAGTTTCAAGTTCAAATGACTTAAAAGATTGATGGACCTCGAAGTTGTTGTAACTTGCTAGACGCAAGAAAATTGCATAATGCGATCTCCCCTTGCAAGCACAATCACAGACAAGAGGACATCAATTTCAAGCTCATTCATGGGCTAAATGAGTAATCAGGTTTGGACGAACATATCGTGTGGAGTCTGACGGAGGTGTGGAAAGATGGAGAGTGATGACTCTAAATAAACTTTTAGTGCCTATGCACACTATACTTGATGACAGTGGCTCCATACCCTAAAAGTAGGACTCCTGCTGGAGGTGATCCACGAATGAAGACTTATAATACATGCACTCAATAAATCTCGTACGCAAACACTTATTTGCATCGCAACTACTAGAAAGAACCACTAAGTCACTCAACAAATAGTCTAGTCAAATGGTGGTTCAAATCTTAATCGAGACTGAGCTTCCAAAGCTCTATGTTGTTGGAAAACTCCGCTTCTCTCTGAAAACCTTCCAAAATATATAATTGCTCAGAAATTTTCCACTACGTTTATTCATCTTTATAGGAATCAAGTTCACGCGAAAGGAAATTTTCAAGCAATCAACTTGCTTACCTTTATACTTAGTTCCACTTTTTTCGAATAAAAAGAAGCTTAAGAATTCATTAACTGTGGATATATTTAGGTTATATGAAAGTTTTTTTCTTTTAGGTGTTATCGAAGGACCTATTTATTTTTCAATAAAAAAGCAGTCAGAAGGATTTGAAATTTTAACCTAATGGTGAAGAACACACATCTTAACAAGTTCCGTTTATATTAGTTATAATATTGCTTTAAAGATTACAAATTCAGTGGTAGTAAAAAATTTACAATTTAGTCAATTTTATTCATATGGATTGATAAAATATGATAATATGATTTGAAAAAACTGTAAAAAATAGTTAAGAAGATTGATAAGTGTATCATTATTGTATGTTTGAGAGAGGTGTATGAACAGTTTCATAAATCATAATAGTGACTAAATTATAGAAAAGAAAAAAGAAAATGATGGTTGTGATTTTAATTTATTCAGGCAGAGGTTGCAAGGCAAGAGTTAATATTGAGAATGGAGAAAGAAGAGTTTGAAAAAGAGAAAATGGAGGTTCTTAAAGGAGGAACTGCAATCATCCAACACAACGAAGATGGAGCTCTTGAAATCATTCATAATGGTGACAAATACCGATGCCTCAGATTTGCAAAAGCTAACAAATGATTATAATAAATATTCCAACTTGAAACAAATATTGCTTAAGTCTGTCTTAAACCCTGTTGAACTTATATTAAAATTGGGAAGTCTAGTTAATTCTTATGCAAACTGAATAGGTAAAAATTTGCGGTATCTATATGTATAGTTTTTACCAACACCATTTCAAAACCCCAAGAACTTGACATTCTACAACTGCTTCAGATATCGCCCACCATCATCCATAAATCCGATAGCTTAACCAGGTGGAGCTTGAATTCCCCAGCGCACTAGGACTCGAGGGTTGAATCTTACTTCTTTTTTTTTTTTCCCTTTTTTGTAACAATTGCTTTTTCTTATATGCCAATCAACTGTTATCTAGCTTGTAGTTAGAATCCATAATTCCTCAGCTAACCAATTGAAACATATGATGGGGCAAAAACAACAGGAGAGCAGTACCCCTAATACAATGATATAAAAGGAACAGTAGTTGTTTGGATTACCCATTCAAAGCTGTCACTACCTTTGCAGCTTCCCGATTGAGTGTAGATACACAGCAACCGATACAACGCT

mRNA sequence

AGAAAATGTTGTGGAAAATAAAATTGTTGGTAGAGAAGTTCGTGGAAGAAGTGAAGGCAGAAGTGGAAGCTGATGTTGAAAATAGAATGAGAAAGGAGGAAGAAAAGCAACTCAGTGACCGGGAACGATGGAACGCCCAGCTATCACGCCGAGAGGCAGAGGTTGCAAGGCAAGAGTTAATATTGAGAATGGAGAAAGAAGAGTTTGAAAAAGAGAAAATGGAGGTTCTTAAAGGAGGAACTGCAATCATCCAACACAACGAAGATGGAGCTCTTGAAATCATTCATAATGGTGACAAATACCGATGCCTCAGATTTGCAAAAGCTAACAAATGATTATAATAAATATTCCAACTTGAAACAAATATTGCTTAAGTCTGTCTTAAACCCTGTTGAACTTATATTAAAATTGGGAAGTCTAGTTAATTCTTATGCAAACTGAATAGGTAAAAATTTGCGGTATCTATATGTATAGTTTTTACCAACACCATTTCAAAACCCCAAGAACTTGACATTCTACAACTGCTTCAGATATCGCCCACCATCATCCATAAATCCGATAGCTTAACCAGGTGGAGCTTGAATTCCCCAGCGCACTAGGACTCGAGGGTTGAATCTTACTTCTTTTTTTTTTTTCCCTTTTTTGTAACAATTGCTTTTTCTTATATGCCAATCAACTGTTATCTAGCTTGTAGTTAGAATCCATAATTCCTCAGCTAACCAATTGAAACATATGATGGGGCAAAAACAACAGGAGAGCAGTACCCCTAATACAATGATATAAAAGGAACAGTAGTTGTTTGGATTACCCATTCAAAGCTGTCACTACCTTTGCAGCTTCCCGATTGAGTGTAGATACACAGCAACCGATACAACGCT

Coding sequence (CDS)

ATGTTGTGGAAAATAAAATTGTTGGTAGAGAAGTTCGTGGAAGAAGTGAAGGCAGAAGTGGAAGCTGATGTTGAAAATAGAATGAGAAAGGAGGAAGAAAAGCAACTCAGTGACCGGGAACGATGGAACGCCCAGCTATCACGCCGAGAGGCAGAGGTTGCAAGGCAAGAGTTAATATTGAGAATGGAGAAAGAAGAGTTTGAAAAAGAGAAAATGGAGGTTCTTAAAGGAGGAACTGCAATCATCCAACACAACGAAGATGGAGCTCTTGAAATCATTCATAATGGTGACAAATACCGATGCCTCAGATTTGCAAAAGCTAACAAATGA

Protein sequence

MLWKIKLLVEKFVEEVKAEVEADVENRMRKEEEKQLSDRERWNAQLSRREAEVARQELILRMEKEEFEKEKMEVLKGGTAIIQHNEDGALEIIHNGDKYRCLRFAKANK*

Homology

[Close]

BLAST of Cucsa.119960 vs. TrEMBL
Match: A0A0A0KAA0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G117750 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.3e-53
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 1


Query: 1   MLWKIKLLVEKFVEEVKAEVEADVENRMRKEEEKQLSDRERWNAQLSRREAEVARQELIL 60
           MLWKIKLLVEKFVEEVKAEVEADVENRMRKEEEKQLSDRERWNAQLSRREAEVARQELIL
Sbjct: 1   MLWKIKLLVEKFVEEVKAEVEADVENRMRKEEEKQLSDRERWNAQLSRREAEVARQELIL 60

Query: 61  RMEKEEFEKEKMEVLKGGTAIIQHNEDGALEIIHNGDKYRCLRFAKANK 110
           RMEKEEFEKEKMEVLKGGTAIIQHNEDGALEIIHNGDKYRCLRFAKANK
Sbjct: 61  RMEKEEFEKEKMEVLKGGTAIIQHNEDGALEIIHNGDKYRCLRFAKANK 109

[Close]

BLAST of Cucsa.119960 vs. TrEMBL
Match: A0A061E1K0_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_007592 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 6.1e-24
Identity = 66/119 (55.46%), Postives = 85/119 (71.43%), Query Frame = 1


Query: 1   MLWKIKLLVEKFVEEVKAEVEADVENRMRKEEEKQ--LSDRER--------WNAQLSRRE 60
           M  +IK +V+KFVEE+K  +EAD+++R+ KE E Q  + +RER        W A+LSRRE
Sbjct: 1   MSLRIKAVVDKFVEELKEALEADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRRE 60

Query: 61  AEVARQELILRMEKEEFEKEKMEVLKGGTAIIQHNEDGALEIIHNGDKYRCLRFAKANK 110
           AE+ARQE  L+MEKE  EKEK  ++  GTA  Q N+DGALEI  +G+KYRCLRFAKA K
Sbjct: 61  AEIARQEARLKMEKENLEKEKSVLM--GTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117

[Close]

BLAST of Cucsa.119960 vs. TrEMBL
Match: B9RKZ1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1566200 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.4e-23
Identity = 65/119 (54.62%), Postives = 85/119 (71.43%), Query Frame = 1


Query: 1   MLWKIKLLVEKFVEEVKAEVEADVENRMRKEEEKQ--LSDRER--------WNAQLSRRE 60
           M  +IK +V+KFVEE+K  ++AD+++R+ KE E Q  + +RER        W A+LSRRE
Sbjct: 1   MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRRE 60

Query: 61  AEVARQELILRMEKEEFEKEKMEVLKGGTAIIQHNEDGALEIIHNGDKYRCLRFAKANK 110
           AE+ARQE  L+MEKE  EKEK  ++  GTA  Q N+DGALEI  +G+KYRCLRFAKA K
Sbjct: 61  AEIARQEARLKMEKENLEKEKSVLM--GTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117

[Close]

BLAST of Cucsa.119960 vs. TrEMBL
Match: A0A0A0K6A6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G027820 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.4e-23
Identity = 65/119 (54.62%), Postives = 85/119 (71.43%), Query Frame = 1


Query: 1   MLWKIKLLVEKFVEEVKAEVEADVENRMRKEEEKQ--LSDRER--------WNAQLSRRE 60
           M  +IK +V+KFVEE+K  ++AD+++R+ KE E Q  + +RER        W A+LSRRE
Sbjct: 1   MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRRE 60

Query: 61  AEVARQELILRMEKEEFEKEKMEVLKGGTAIIQHNEDGALEIIHNGDKYRCLRFAKANK 110
           AE+ARQE  L+MEKE  EKEK  ++  GTA  Q N+DGALEI  +G+KYRCLRFAKA K
Sbjct: 61  AEIARQEARLKMEKENLEKEKSVLM--GTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117

[Close]

BLAST of Cucsa.119960 vs. TrEMBL
Match: V4SA01_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029609mg PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 3.0e-23
Identity = 64/119 (53.78%), Postives = 85/119 (71.43%), Query Frame = 1


Query: 1   MLWKIKLLVEKFVEEVKAEVEADVENRMRKEEEKQ--LSDRER--------WNAQLSRRE 60
           M  +IK +V+KFV+E+K  ++AD+++R+ KE E Q  + +RER        W A+LSRRE
Sbjct: 1   MSLRIKTVVDKFVQELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRRE 60

Query: 61  AEVARQELILRMEKEEFEKEKMEVLKGGTAIIQHNEDGALEIIHNGDKYRCLRFAKANK 110
           AE+ARQE  L+MEKE  EKEK  ++  GTA  Q N+DGALEI  +G+KYRCLRFAKA K
Sbjct: 61  AEIARQEARLKMEKENLEKEKSVLM--GTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117

[Close]

BLAST of Cucsa.119960 vs. TAIR10
Match: AT2G17350.1 (AT2G17350.1 unknown protein)

HSP 1 Score: 115.2 bits (287), Expect = 2.6e-26
Identity = 63/119 (52.94%), Postives = 85/119 (71.43%), Query Frame = 1


Query: 1   MLWKIKLLVEKFVEEVKAEVEADVENRMRKEEEKQ--LSDRER--------WNAQLSRRE 60
           M  +IKL+V+KFVEE+K  ++AD+++R+ KE E Q  + +RER        W A+LSRRE
Sbjct: 1   MSLRIKLVVDKFVEELKQALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRRE 60

Query: 61  AEVARQELILRMEKEEFEKEKMEVLKGGTAIIQHNEDGALEIIHNGDKYRCLRFAKANK 110
            E+ARQE  L+ME+E  EKEK  ++  GTA  Q N+DGALEI  +G+KYRCLRF+KA K
Sbjct: 61  TEIARQEARLKMERENLEKEKSVLM--GTASNQDNQDGALEITVSGEKYRCLRFSKAKK 117

[Close]

BLAST of Cucsa.119960 vs. NCBI nr
Match: gi|449444427|ref|XP_004139976.1| (PREDICTED: uncharacterized protein LOC101213270 [Cucumis sativus])

HSP 1 Score: 216.9 bits (551), Expect = 1.8e-53
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 1


Query: 1   MLWKIKLLVEKFVEEVKAEVEADVENRMRKEEEKQLSDRERWNAQLSRREAEVARQELIL 60
           MLWKIKLLVEKFVEEVKAEVEADVENRMRKEEEKQLSDRERWNAQLSRREAEVARQELIL
Sbjct: 1   MLWKIKLLVEKFVEEVKAEVEADVENRMRKEEEKQLSDRERWNAQLSRREAEVARQELIL 60

Query: 61  RMEKEEFEKEKMEVLKGGTAIIQHNEDGALEIIHNGDKYRCLRFAKANK 110
           RMEKEEFEKEKMEVLKGGTAIIQHNEDGALEIIHNGDKYRCLRFAKANK
Sbjct: 61  RMEKEEFEKEKMEVLKGGTAIIQHNEDGALEIIHNGDKYRCLRFAKANK 109

[Close]

BLAST of Cucsa.119960 vs. NCBI nr
Match: gi|659094631|ref|XP_008448162.1| (PREDICTED: uncharacterized protein LOC103490446 [Cucumis melo])

HSP 1 Score: 196.4 bits (498), Expect = 2.5e-47
Identity = 98/109 (89.91%), Postives = 105/109 (96.33%), Query Frame = 1


Query: 1   MLWKIKLLVEKFVEEVKAEVEADVENRMRKEEEKQLSDRERWNAQLSRREAEVARQELIL 60
           M WKIKLLV+KFVEEVKAEVEADVENRMRKE+E+QLSDRE+WNAQLSRREAEVARQELIL
Sbjct: 1   MWWKIKLLVDKFVEEVKAEVEADVENRMRKEKEQQLSDREQWNAQLSRREAEVARQELIL 60

Query: 61  RMEKEEFEKEKMEVLKGGTAIIQHNEDGALEIIHNGDKYRCLRFAKANK 110
           RMEKEEFEKEKMEVLK GTA+IQHN+DGALEI  NGDKYRCLR+AKANK
Sbjct: 61  RMEKEEFEKEKMEVLKEGTAVIQHNKDGALEITLNGDKYRCLRYAKANK 109

[Close]

BLAST of Cucsa.119960 vs. NCBI nr
Match: gi|590688977|ref|XP_007043098.1| (Uncharacterized protein TCM_007592 [Theobroma cacao])

HSP 1 Score: 118.2 bits (295), Expect = 8.8e-24
Identity = 66/119 (55.46%), Postives = 85/119 (71.43%), Query Frame = 1


Query: 1   MLWKIKLLVEKFVEEVKAEVEADVENRMRKEEEKQ--LSDRER--------WNAQLSRRE 60
           M  +IK +V+KFVEE+K  +EAD+++R+ KE E Q  + +RER        W A+LSRRE
Sbjct: 1   MSLRIKAVVDKFVEELKEALEADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRRE 60

Query: 61  AEVARQELILRMEKEEFEKEKMEVLKGGTAIIQHNEDGALEIIHNGDKYRCLRFAKANK 110
           AE+ARQE  L+MEKE  EKEK  ++  GTA  Q N+DGALEI  +G+KYRCLRFAKA K
Sbjct: 61  AEIARQEARLKMEKENLEKEKSVLM--GTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117

[Close]

BLAST of Cucsa.119960 vs. NCBI nr
Match: gi|255546702|ref|XP_002514410.1| (PREDICTED: uncharacterized protein LOC8285380 [Ricinus communis])

HSP 1 Score: 117.1 bits (292), Expect = 2.0e-23
Identity = 65/119 (54.62%), Postives = 85/119 (71.43%), Query Frame = 1


Query: 1   MLWKIKLLVEKFVEEVKAEVEADVENRMRKEEEKQ--LSDRER--------WNAQLSRRE 60
           M  +IK +V+KFVEE+K  ++AD+++R+ KE E Q  + +RER        W A+LSRRE
Sbjct: 1   MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRRE 60

Query: 61  AEVARQELILRMEKEEFEKEKMEVLKGGTAIIQHNEDGALEIIHNGDKYRCLRFAKANK 110
           AE+ARQE  L+MEKE  EKEK  ++  GTA  Q N+DGALEI  +G+KYRCLRFAKA K
Sbjct: 61  AEIARQEARLKMEKENLEKEKSVLM--GTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117

[Close]

BLAST of Cucsa.119960 vs. NCBI nr
Match: gi|658043357|ref|XP_008357313.1| (PREDICTED: beta-mannosyltransferase 1-like [Malus domestica])

HSP 1 Score: 116.3 bits (290), Expect = 3.3e-23
Identity = 64/119 (53.78%), Postives = 86/119 (72.27%), Query Frame = 1


Query: 1   MLWKIKLLVEKFVEEVKAEVEADVENRMRKEEEKQ--LSDRER--------WNAQLSRRE 60
           M  +IKL+V+KFV+E+K  ++AD+++R+ KE E Q  + +RER        W A+LSRRE
Sbjct: 1   MSLRIKLVVDKFVQELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRRE 60

Query: 61  AEVARQELILRMEKEEFEKEKMEVLKGGTAIIQHNEDGALEIIHNGDKYRCLRFAKANK 110
           AE+ARQE  L++EKE  EKEK  ++  GTA  Q N+DGALEI  +G+KYRCLRFAKA K
Sbjct: 61  AEIARQEARLKIEKENLEKEKSVLM--GTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117

The following BLAST results are available for this feature:

BLAST of Cucsa.119960 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAA0_CUCSA	1.3e-53	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G117750 PE=4 SV=1	[more]
A0A061E1K0_THECC	6.1e-24	55.46	Uncharacterized protein OS=Theobroma cacao GN=TCM_007592 PE=4 SV=1	[more]
B9RKZ1_RICCO	1.4e-23	54.62	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1566200 PE=4 SV=1	[more]
A0A0A0K6A6_CUCSA	1.4e-23	54.62	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G027820 PE=4 SV=1	[more]
V4SA01_9ROSI	3.0e-23	53.78	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029609mg PE=4 SV=1	[more]

BLAST of Cucsa.119960 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G17350.1	2.6e-26	52.94	unknown protein	[more]

BLAST of Cucsa.119960 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449444427\|ref\|XP_004139976.1\|	1.8e-53	100.00	PREDICTED: uncharacterized protein LOC101213270 [Cucumis sativus]	[more]
gi\|659094631\|ref\|XP_008448162.1\|	2.5e-47	89.91	PREDICTED: uncharacterized protein LOC103490446 [Cucumis melo]	[more]
gi\|590688977\|ref\|XP_007043098.1\|	8.8e-24	55.46	Uncharacterized protein TCM_007592 [Theobroma cacao]	[more]
gi\|255546702\|ref\|XP_002514410.1\|	2.0e-23	54.62	PREDICTED: uncharacterized protein LOC8285380 [Ricinus communis]	[more]
gi\|658043357\|ref\|XP_008357313.1\|	3.3e-23	53.78	PREDICTED: beta-mannosyltransferase 1-like [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.119960.1	Cucsa.119960.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 13..33 scor
None	No IPR available	PANTHER	PTHR35715	FAMILY NOT NAMED	coord: 2..109 score: 5.0
None	No IPR available	PANTHER	PTHR35715:SF2	SUBFAMILY NOT NAMED	coord: 2..109 score: 5.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.119960	Csa7G027820	Cucumber (Chinese Long) v2	cgycuB156
Cucsa.119960	MELO3C013484	Melon (DHL92) v3.5.1	cgymeB179
Cucsa.119960	ClCG02G010820	Watermelon (Charleston Gray)	cgywcgB184
Cucsa.119960	CSPI06G09590	Wild cucumber (PI 183967)	cgycpiB156
Cucsa.119960	CSPI07G02240	Wild cucumber (PI 183967)	cgycpiB157
Cucsa.119960	CmaCh11G013220	Cucurbita maxima (Rimu)	cgycmaB0294
Cucsa.119960	CmaCh02G003050	Cucurbita maxima (Rimu)	cgycmaB0305
Cucsa.119960	CmaCh19G008100	Cucurbita maxima (Rimu)	cgycmaB0297
Cucsa.119960	CmoCh11G017990	Cucurbita moschata (Rifu)	cgycmoB0290
Cucsa.119960	CmoCh19G008310	Cucurbita moschata (Rifu)	cgycmoB0294
Cucsa.119960	Lsi10G000070	Bottle gourd (USVL1VR-Ls)	cgylsiB172
Cucsa.119960	Lsi11G013040	Bottle gourd (USVL1VR-Ls)	cgylsiB178
Cucsa.119960	Cp4.1LG15g06560	Cucurbita pepo (Zucchini)	cgycpeB0287
Cucsa.119960	Cp4.1LG04g04330	Cucurbita pepo (Zucchini)	cgycpeB0298
Cucsa.119960	MELO3C013484.2	Melon (DHL92) v3.6.1	cgymedB177
Cucsa.119960	CsaV3_6G010030	Cucumber (Chinese Long) v3	cgycucB159
Cucsa.119960	CsaV3_7G002090	Cucumber (Chinese Long) v3	cgycucB160
Cucsa.119960	Cla97C02G036630	Watermelon (97103) v2	cgywmbB179
Cucsa.119960	Cla97C02G029820	Watermelon (97103) v2	cgywmbB180
Cucsa.119960	Bhi05G001339	Wax gourd	cgywgoB208
Cucsa.119960	Carg18105	Silver-seed gourd	carcgyB1184
Cucsa.119960	Carg04110	Silver-seed gourd	carcgyB0240
Cucsa.119960	Carg19773	Silver-seed gourd	carcgyB0974

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.119960	Silver-seed gourd	carcgyB0408
Cucsa.119960	Watermelon (97103) v2	cgywmbB178
Cucsa.119960	Wax gourd	cgywgoB210
Cucsa.119960	Wax gourd	cgywgoB211
Cucsa.119960	Cucumber (Gy14) v1	cgycgyB040
Cucsa.119960	Cucurbita maxima (Rimu)	cgycmaB0303
Cucsa.119960	Cucurbita moschata (Rifu)	cgycmoB0301
Cucsa.119960	Cucurbita moschata (Rifu)	cgycmoB0303
Cucsa.119960	Cucumber (Chinese Long) v2	cgycuB155
Cucsa.119960	Watermelon (Charleston Gray)	cgywcgB183
Cucsa.119960	Watermelon (Charleston Gray)	cgywcgB185
Cucsa.119960	Watermelon (97103) v1	cgywmB180
Cucsa.119960	Watermelon (97103) v1	cgywmB186
Cucsa.119960	Cucurbita pepo (Zucchini)	cgycpeB0289
Cucsa.119960	Cucurbita pepo (Zucchini)	cgycpeB0304