MELO3C013484 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C013484
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_255
Location	chr11 : 14874332 .. 14877496 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAGGAAACACAGGGGGTGAGAAGTAGAGATTGAAAATGTGGTGGAAAATAAAATTGTTGGTAGACAAGTTCGTGGAGGAAGTGAAGGCAGAGGTGGAAGCTGATGTTGAAAATAGAATGAGAAAGGAGAAAGAACAGCAACTCAGTGACCGGGAACAATGGAACGCCCAGCTTTCACGCCGAGAGGTACTTTCAAAAGGCCCAACTCTCTGTTATTCTCGATCGATTTGTACTGATGACCACTCTAAAATTAATCGCCCGCCATAGTGTAACATAATCATAAGATTATATTTCATACAGAGTTTGTAAGGGGTGGGTTATCGATCAACAAAACCACCCAGGAAAGGATCGTCCATACCAAAAATATTCCTTCTTTTTCTCTACTCGTCAGTTAAAAAAGCTTTTGATTGGGGAAACTATCACAAGAGAGTTTATCTTTCACAAATGCCACTTTCGAGTACCCATGTTTTGTAGTTATTGCCAACCAATTCAAAAGCTTGCGGTATGTTTAATGGGAAATTTGGATTTTTAGATTGACTCACTAAATATTCAATTTGGATAATGTTTTTTTTTTTTTTATCCGAAAAGATCGAAAACAACGATCATCCCCTTTTCGTTGTCCCGTTTTCGTTGTATTCATAATTTGAATTTTAAATATTCAAATGTCACGTTATAAACTCAATATGTATTATAAAATGTAAATTAAATTTTATAATATTACAGATTAATAATGGACCATTTTTGAAATTGAAACTATTTACAAATTATAACAAAATTATTCAATTGTTTAATTTTTATAAAGAAATTTATTATAAGTTTTAAAAGGTTGAAAATATTCTAGCAAATTTTAGATTATATAATTTCCATAATTGTTTATCAATATCGATTTCTATATTTTTAAAATATTTTAGTTCACTTTTTTCTGTTTTAAAAAATGCCCCGTCTTTTAACCTAAAACATCTTCATAAATAAATTCATAATAGTTTATTGTCAATTAGTATTTAGTAATAGTTTATTGTCAATTAGTATTTAGTAAGTAACTATAGATAATTTTATGATTTATAAATATAGTATTAAACACAATTTAAATGGTTGTTTAAATTTAAATTCAATTTCTAAATCTACCACCAAATAGATATCTAAAAAACATGAAATACAATTATATTTTCATTAAATCCGCTATGAAACTTAGCTTTTTTAGTACCACAATTAAACAATTAATCTTAGGTCTTCAATAGTTAATTTGGACGTGAATTTTGTTTTGGTGTTGATATCAATCTTTGTCAAGATGTATCGAGATGAGTCATTAGACTGATTGAGGCAAAAACTATGCTATTTATAATTAGTGTTATTTCAACGATTTTCCTTTTCATTTAGTGTTAAATAAGATTTGAATTTTCAATTTTGGATATTTCTAAAATTCATGATTAATACTTATAAAATCTAGATTTTGGAGTTTGACCAATCTTTTAATTTAATTGATATTTGACTTCTTACAAAATTTTAAATATGACACGAATTTGTTTCGCATCAAATTAAAAATTTAGAGATGTAATCTATACATTTATTAGACATTTTTTTTAAGTACCTCGTGGGAAATGCTTACTCTTATTGAAGAGGTTCTTAATCAATTACGTTATTCAGTCTTTCCCTTTGGTTTGGAAAAACAATACTTCTAGGTGCTACGAACTTCGTTCTTGACTCACCAATAATCTATTGGGAACTTCCCCACCCTTTCGGTCGATCTGTGAAACATGTTCTCTTTGTCCCTCCCTCTCCTTTTGGAGTACAATCAGAAGGAGCTTTTAAGTTTATGTTCCATTATTTCACACCTATCATAAGAATTTTAGAGAATTTAGATATATAGATATATACACGATAGTCTTTCCTCTAATAAACTACAAAATGTTTAAACAATCACTTAAAGGTTGAATCGACTAATCAGTTTCAAATTCAAATGACTTAAAGATTGATGAACCTCAAAGTTGTTGTAACTTGCTAGATGAGAGGAAATTGCATATTGTGATCTCCCCTCACAAGCATAACTAGATACAAGAGAACATCAATTGCAAGCCTGCTCATGGGCTAAATGAGTAGTCCAGTCTAGATGAATAGACTGTGGGACCTAGTGAAGGTGTGGAAAGATGGAGAGTGGTGACTCTCGATATGCTTTTAGTGTCTATACATGCTATGCTTGACGACAATGGCTCCATACCCTAAAAGTAGGATTCCTTTGCTGTAGGTGATCCACCAACTTAAAAAAAAAAATACAAGTACTCATATATCTCATGAGCGCTTATTTGCATTACAACTAATAGAAAGAACCACTAAGTCCCTAAACGAATAGTTTAGTCTAATGGTGGTTCAGATCTTGATCGAGACTGAGCTTCCCAAGCTCTATGCTGTCAGGGAACTCTGCTTTAGTCTAAACACCTTCCAAAAATGTATAATTGCTCTAAAATTTTCACTACACTTATATTCATCGTTATAAGAATCGGGTTCAAGCGAAAGAAAATTCCCAAGCAATCAATTTGCTTACCTTTATACTTGGTTCCATTTTTTCCGAATAAAAAGAAGCTTAAGAATTCATTAACGTATGCATATATTTATGTCATATGAAAGTTTTTTCTTTTAGGTTCAACAATAGGTAGTCGAAGGTTTTTTTTTTTTTTTTTAAAAAGGAAATGGAGTTGAAGGATTTGAAATTGGAACCTAATGGCCAAGTGCACACATCTTAACAAGTTTTGTTTACATTAGTTATAATATTGCATTAAAGATTACAAATTCAGTCGAAGTAAAAAATTAACAATTTAGTCAAAAATTTATTCATATGGGTTGATAAAGCTTTATAGTATTGTTACAAAATTGTTAAATTGTATCATTATTGTATGTTCGAGAGAGGTGTATGAACATTATCATAATAGTGATTGTAATAATATAGAAGAGGAAAAAAGAATATGATAGTTGTGATTTTAATTTATTCAGGCGGAGGTTGCAAGACAAGAATTAATATTGAGAATGGAGAAAGAAGAGTTTGAAAAAGAGAAAATGGAGGTTCTTAAAGAAGGAACTGCAGTTATCCAACACAACAAAGATGGAGCTCTTGAAATCACTCTTAATGGTGACAAATACCGATGCCTCAGATATGCCAAAGCTAACAAATGA

mRNA sequence

ATAGGAAACACAGGGGGTGAGAAGTAGAGATTGAAAATGTGGTGGAAAATAAAATTGTTGGTAGACAAGTTCGTGGAGGAAGTGAAGGCAGAGGTGGAAGCTGATGTTGAAAATAGAATGAGAAAGGAGAAAGAACAGCAACTCAGTGACCGGGAACAATGGAACGCCCAGCTTTCACGCCGAGAGGCGGAGGTTGCAAGACAAGAATTAATATTGAGAATGGAGAAAGAAGAGTTTGAAAAAGAGAAAATGGAGGTTCTTAAAGAAGGAACTGCAGTTATCCAACACAACAAAGATGGAGCTCTTGAAATCACTCTTAATGGTGACAAATACCGATGCCTCAGATATGCCAAAGCTAACAAATGA

Coding sequence (CDS)

ATGTGGTGGAAAATAAAATTGTTGGTAGACAAGTTCGTGGAGGAAGTGAAGGCAGAGGTGGAAGCTGATGTTGAAAATAGAATGAGAAAGGAGAAAGAACAGCAACTCAGTGACCGGGAACAATGGAACGCCCAGCTTTCACGCCGAGAGGCGGAGGTTGCAAGACAAGAATTAATATTGAGAATGGAGAAAGAAGAGTTTGAAAAAGAGAAAATGGAGGTTCTTAAAGAAGGAACTGCAGTTATCCAACACAACAAAGATGGAGCTCTTGAAATCACTCTTAATGGTGACAAATACCGATGCCTCAGATATGCCAAAGCTAACAAATGA

Protein sequence

MWWKIKLLVDKFVEEVKAEVEADVENRMRKEKEQQLSDREQWNAQLSRREAEVARQELILRMEKEEFEKEKMEVLKEGTAVIQHNKDGALEITLNGDKYRCLRYAKANK*

Homology

[Close]

BLAST of MELO3C013484 vs. TrEMBL
Match: A0A0A0KAA0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G117750 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.8e-47
Identity = 98/109 (89.91%), Postives = 105/109 (96.33%), Query Frame = 1


Query: 1   MWWKIKLLVDKFVEEVKAEVEADVENRMRKEKEQQLSDREQWNAQLSRREAEVARQELIL 60
           M WKIKLLV+KFVEEVKAEVEADVENRMRKE+E+QLSDRE+WNAQLSRREAEVARQELIL
Sbjct: 1   MLWKIKLLVEKFVEEVKAEVEADVENRMRKEEEKQLSDRERWNAQLSRREAEVARQELIL 60

Query: 61  RMEKEEFEKEKMEVLKEGTAVIQHNKDGALEITLNGDKYRCLRYAKANK 110
           RMEKEEFEKEKMEVLK GTA+IQHN+DGALEI  NGDKYRCLR+AKANK
Sbjct: 61  RMEKEEFEKEKMEVLKGGTAIIQHNEDGALEIIHNGDKYRCLRFAKANK 109

[Close]

BLAST of MELO3C013484 vs. TrEMBL
Match: A0A061E1K0_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_007592 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 7.3e-25
Identity = 65/116 (56.03%), Postives = 87/116 (75.00%), Query Frame = 1


Query: 4   KIKLLVDKFVEEVKAEVEADVENRMRKEKEQQ--LSDREQ--------WNAQLSRREAEV 63
           +IK +VDKFVEE+K  +EAD+++R+ KE+E Q  + +RE+        W A+LSRREAE+
Sbjct: 4   RIKAVVDKFVEELKEALEADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEI 63

Query: 64  ARQELILRMEKEEFEKEKMEVLKEGTAVIQHNKDGALEITLNGDKYRCLRYAKANK 110
           ARQE  L+MEKE  EKEK  ++  GTA  Q N+DGALEIT++G+KYRCLR+AKA K
Sbjct: 64  ARQEARLKMEKENLEKEKSVLM--GTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117

[Close]

BLAST of MELO3C013484 vs. TrEMBL
Match: B9RKZ1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1566200 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.6e-24
Identity = 64/116 (55.17%), Postives = 87/116 (75.00%), Query Frame = 1


Query: 4   KIKLLVDKFVEEVKAEVEADVENRMRKEKEQQ--LSDREQ--------WNAQLSRREAEV 63
           +IK +VDKFVEE+K  ++AD+++R+ KE+E Q  + +RE+        W A+LSRREAE+
Sbjct: 4   RIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEI 63

Query: 64  ARQELILRMEKEEFEKEKMEVLKEGTAVIQHNKDGALEITLNGDKYRCLRYAKANK 110
           ARQE  L+MEKE  EKEK  ++  GTA  Q N+DGALEIT++G+KYRCLR+AKA K
Sbjct: 64  ARQEARLKMEKENLEKEKSVLM--GTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117

[Close]

BLAST of MELO3C013484 vs. TrEMBL
Match: A0A0A0K6A6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G027820 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.6e-24
Identity = 64/116 (55.17%), Postives = 87/116 (75.00%), Query Frame = 1


Query: 4   KIKLLVDKFVEEVKAEVEADVENRMRKEKEQQ--LSDREQ--------WNAQLSRREAEV 63
           +IK +VDKFVEE+K  ++AD+++R+ KE+E Q  + +RE+        W A+LSRREAE+
Sbjct: 4   RIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEI 63

Query: 64  ARQELILRMEKEEFEKEKMEVLKEGTAVIQHNKDGALEITLNGDKYRCLRYAKANK 110
           ARQE  L+MEKE  EKEK  ++  GTA  Q N+DGALEIT++G+KYRCLR+AKA K
Sbjct: 64  ARQEARLKMEKENLEKEKSVLM--GTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117

[Close]

BLAST of MELO3C013484 vs. TrEMBL
Match: V4SA01_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029609mg PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.6e-24
Identity = 63/116 (54.31%), Postives = 87/116 (75.00%), Query Frame = 1


Query: 4   KIKLLVDKFVEEVKAEVEADVENRMRKEKEQQ--LSDREQ--------WNAQLSRREAEV 63
           +IK +VDKFV+E+K  ++AD+++R+ KE+E Q  + +RE+        W A+LSRREAE+
Sbjct: 4   RIKTVVDKFVQELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEI 63

Query: 64  ARQELILRMEKEEFEKEKMEVLKEGTAVIQHNKDGALEITLNGDKYRCLRYAKANK 110
           ARQE  L+MEKE  EKEK  ++  GTA  Q N+DGALEIT++G+KYRCLR+AKA K
Sbjct: 64  ARQEARLKMEKENLEKEKSVLM--GTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117

[Close]

BLAST of MELO3C013484 vs. TAIR10
Match: AT2G17350.1 (AT2G17350.1 unknown protein)

HSP 1 Score: 118.2 bits (295), Expect = 3.1e-27
Identity = 62/116 (53.45%), Postives = 85/116 (73.28%), Query Frame = 1


Query: 4   KIKLLVDKFVEEVKAEVEADVENRMRKEKEQQ--LSDREQ--------WNAQLSRREAEV 63
           +IKL+VDKFVEE+K  ++AD+++R+ KE+E Q  + +RE+        W A+LSRRE E+
Sbjct: 4   RIKLVVDKFVEELKQALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRRETEI 63

Query: 64  ARQELILRMEKEEFEKEKMEVLKEGTAVIQHNKDGALEITLNGDKYRCLRYAKANK 110
           ARQE  L+ME+E  EKEK  ++  GTA  Q N+DGALEIT++G+KYRCLR++KA K
Sbjct: 64  ARQEARLKMERENLEKEKSVLM--GTASNQDNQDGALEITVSGEKYRCLRFSKAKK 117

[Close]

BLAST of MELO3C013484 vs. NCBI nr
Match: gi|659094631|ref|XP_008448162.1| (PREDICTED: uncharacterized protein LOC103490446 [Cucumis melo])

HSP 1 Score: 218.8 bits (556), Expect = 4.8e-54
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 1


Query: 1   MWWKIKLLVDKFVEEVKAEVEADVENRMRKEKEQQLSDREQWNAQLSRREAEVARQELIL 60
           MWWKIKLLVDKFVEEVKAEVEADVENRMRKEKEQQLSDREQWNAQLSRREAEVARQELIL
Sbjct: 1   MWWKIKLLVDKFVEEVKAEVEADVENRMRKEKEQQLSDREQWNAQLSRREAEVARQELIL 60

Query: 61  RMEKEEFEKEKMEVLKEGTAVIQHNKDGALEITLNGDKYRCLRYAKANK 110
           RMEKEEFEKEKMEVLKEGTAVIQHNKDGALEITLNGDKYRCLRYAKANK
Sbjct: 61  RMEKEEFEKEKMEVLKEGTAVIQHNKDGALEITLNGDKYRCLRYAKANK 109

[Close]

BLAST of MELO3C013484 vs. NCBI nr
Match: gi|449444427|ref|XP_004139976.1| (PREDICTED: uncharacterized protein LOC101213270 [Cucumis sativus])

HSP 1 Score: 196.4 bits (498), Expect = 2.5e-47
Identity = 98/109 (89.91%), Postives = 105/109 (96.33%), Query Frame = 1


Query: 1   MWWKIKLLVDKFVEEVKAEVEADVENRMRKEKEQQLSDREQWNAQLSRREAEVARQELIL 60
           M WKIKLLV+KFVEEVKAEVEADVENRMRKE+E+QLSDRE+WNAQLSRREAEVARQELIL
Sbjct: 1   MLWKIKLLVEKFVEEVKAEVEADVENRMRKEEEKQLSDRERWNAQLSRREAEVARQELIL 60

Query: 61  RMEKEEFEKEKMEVLKEGTAVIQHNKDGALEITLNGDKYRCLRYAKANK 110
           RMEKEEFEKEKMEVLK GTA+IQHN+DGALEI  NGDKYRCLR+AKANK
Sbjct: 61  RMEKEEFEKEKMEVLKGGTAIIQHNEDGALEIIHNGDKYRCLRFAKANK 109

[Close]

BLAST of MELO3C013484 vs. NCBI nr
Match: gi|590688977|ref|XP_007043098.1| (Uncharacterized protein TCM_007592 [Theobroma cacao])

HSP 1 Score: 121.3 bits (303), Expect = 1.0e-24
Identity = 65/116 (56.03%), Postives = 87/116 (75.00%), Query Frame = 1


Query: 4   KIKLLVDKFVEEVKAEVEADVENRMRKEKEQQ--LSDREQ--------WNAQLSRREAEV 63
           +IK +VDKFVEE+K  +EAD+++R+ KE+E Q  + +RE+        W A+LSRREAE+
Sbjct: 4   RIKAVVDKFVEELKEALEADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEI 63

Query: 64  ARQELILRMEKEEFEKEKMEVLKEGTAVIQHNKDGALEITLNGDKYRCLRYAKANK 110
           ARQE  L+MEKE  EKEK  ++  GTA  Q N+DGALEIT++G+KYRCLR+AKA K
Sbjct: 64  ARQEARLKMEKENLEKEKSVLM--GTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117

[Close]

BLAST of MELO3C013484 vs. NCBI nr
Match: gi|255546702|ref|XP_002514410.1| (PREDICTED: uncharacterized protein LOC8285380 [Ricinus communis])

HSP 1 Score: 120.2 bits (300), Expect = 2.3e-24
Identity = 64/116 (55.17%), Postives = 87/116 (75.00%), Query Frame = 1


Query: 4   KIKLLVDKFVEEVKAEVEADVENRMRKEKEQQ--LSDREQ--------WNAQLSRREAEV 63
           +IK +VDKFVEE+K  ++AD+++R+ KE+E Q  + +RE+        W A+LSRREAE+
Sbjct: 4   RIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEI 63

Query: 64  ARQELILRMEKEEFEKEKMEVLKEGTAVIQHNKDGALEITLNGDKYRCLRYAKANK 110
           ARQE  L+MEKE  EKEK  ++  GTA  Q N+DGALEIT++G+KYRCLR+AKA K
Sbjct: 64  ARQEARLKMEKENLEKEKSVLM--GTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117

[Close]

BLAST of MELO3C013484 vs. NCBI nr
Match: gi|658043357|ref|XP_008357313.1| (PREDICTED: beta-mannosyltransferase 1-like [Malus domestica])

HSP 1 Score: 119.4 bits (298), Expect = 4.0e-24
Identity = 63/116 (54.31%), Postives = 88/116 (75.86%), Query Frame = 1


Query: 4   KIKLLVDKFVEEVKAEVEADVENRMRKEKEQQ--LSDREQ--------WNAQLSRREAEV 63
           +IKL+VDKFV+E+K  ++AD+++R+ KE+E Q  + +RE+        W A+LSRREAE+
Sbjct: 4   RIKLVVDKFVQELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEI 63

Query: 64  ARQELILRMEKEEFEKEKMEVLKEGTAVIQHNKDGALEITLNGDKYRCLRYAKANK 110
           ARQE  L++EKE  EKEK  ++  GTA  Q N+DGALEIT++G+KYRCLR+AKA K
Sbjct: 64  ARQEARLKIEKENLEKEKSVLM--GTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117

The following BLAST results are available for this feature:

BLAST of MELO3C013484 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAA0_CUCSA	1.8e-47	89.91	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G117750 PE=4 SV=1	[more]
A0A061E1K0_THECC	7.3e-25	56.03	Uncharacterized protein OS=Theobroma cacao GN=TCM_007592 PE=4 SV=1	[more]
B9RKZ1_RICCO	1.6e-24	55.17	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1566200 PE=4 SV=1	[more]
A0A0A0K6A6_CUCSA	1.6e-24	55.17	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G027820 PE=4 SV=1	[more]
V4SA01_9ROSI	3.6e-24	54.31	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029609mg PE=4 SV=1	[more]

BLAST of MELO3C013484 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G17350.1	3.1e-27	53.45	unknown protein	[more]

BLAST of MELO3C013484 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659094631\|ref\|XP_008448162.1\|	4.8e-54	100.00	PREDICTED: uncharacterized protein LOC103490446 [Cucumis melo]	[more]
gi\|449444427\|ref\|XP_004139976.1\|	2.5e-47	89.91	PREDICTED: uncharacterized protein LOC101213270 [Cucumis sativus]	[more]
gi\|590688977\|ref\|XP_007043098.1\|	1.0e-24	56.03	Uncharacterized protein TCM_007592 [Theobroma cacao]	[more]
gi\|255546702\|ref\|XP_002514410.1\|	2.3e-24	55.17	PREDICTED: uncharacterized protein LOC8285380 [Ricinus communis]	[more]
gi\|658043357\|ref\|XP_008357313.1\|	4.0e-24	54.31	PREDICTED: beta-mannosyltransferase 1-like [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0071555	cell wall organization
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0004650	polygalacturonase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C013484T1	MELO3C013484T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 13..33 scor
None	No IPR available	PANTHER	PTHR35715	FAMILY NOT NAMED	coord: 4..109 score: 3.9
None	No IPR available	PANTHER	PTHR35715:SF2	SUBFAMILY NOT NAMED	coord: 4..109 score: 3.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C013484	Csa6G117750	Cucumber (Chinese Long) v2	cumeB425
MELO3C013484	Csa7G027820	Cucumber (Chinese Long) v2	cumeB517
MELO3C013484	ClCG02G010820	Watermelon (Charleston Gray)	mewcgB096
MELO3C013484	Cla97C02G029820	Watermelon (97103) v2	mewmbB094
MELO3C013484	Cla97C02G036630	Watermelon (97103) v2	mewmbB098
MELO3C013484	Bhi05G001339	Wax gourd	mewgoB107
MELO3C013484	CSPI06G09590	Wild cucumber (PI 183967)	cpimeB419
MELO3C013484	CSPI07G02240	Wild cucumber (PI 183967)	cpimeB522
MELO3C013484	Cucsa.119960	Cucumber (Gy14) v1	cgymeB179
MELO3C013484	CmaCh19G008100	Cucurbita maxima (Rimu)	cmameB451
MELO3C013484	CmaCh02G003050	Cucurbita maxima (Rimu)	cmameB553
MELO3C013484	CmaCh11G013220	Cucurbita maxima (Rimu)	cmameB085
MELO3C013484	CmoCh19G008310	Cucurbita moschata (Rifu)	cmomeB443
MELO3C013484	CmoCh11G017990	Cucurbita moschata (Rifu)	cmomeB081
MELO3C013484	Lsi11G013040	Bottle gourd (USVL1VR-Ls)	lsimeB088
MELO3C013484	Lsi10G000070	Bottle gourd (USVL1VR-Ls)	lsimeB053
MELO3C013484	Cp4.1LG04g04330	Cucurbita pepo (Zucchini)	cpemeB601
MELO3C013484	Cp4.1LG15g06560	Cucurbita pepo (Zucchini)	cpemeB213
MELO3C013484	CsGy7G001960	Cucumber (Gy14) v2	cgybmeB454
MELO3C013484	Carg18105	Silver-seed gourd	carmeB1032
MELO3C013484	Carg19773	Silver-seed gourd	carmeB0843
MELO3C013484	Carg04110	Silver-seed gourd	carmeB0197
MELO3C013484	CsaV3_6G010030	Cucumber (Chinese Long) v3	cucmeB431
MELO3C013484	CsaV3_7G002090	Cucumber (Chinese Long) v3	cucmeB534

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C013484	Cucumber (Gy14) v1	cgymeB119
MELO3C013484	Cucurbita maxima (Rimu)	cmameB494
MELO3C013484	Cucurbita moschata (Rifu)	cmomeB482
MELO3C013484	Cucurbita moschata (Rifu)	cmomeB542
MELO3C013484	Watermelon (Charleston Gray)	mewcgB092
MELO3C013484	Watermelon (Charleston Gray)	mewcgB112
MELO3C013484	Watermelon (97103) v1	mewmB110
MELO3C013484	Cucurbita pepo (Zucchini)	cpemeB257
MELO3C013484	Cucurbita pepo (Zucchini)	cpemeB659
MELO3C013484	Cucumber (Gy14) v2	cgybmeB367
MELO3C013484	Silver-seed gourd	carmeB0350
MELO3C013484	Watermelon (97103) v2	mewmbB114
MELO3C013484	Wax gourd	mewgoB112
MELO3C013484	Wax gourd	mewgoB126